Spermatogenesis-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G03200 AT4G03200 |
| fragaria_vesca | FvH4_2g25030 |
| malus_domestica | MD03G1280600.v1.1 |
| prunus_persica | Prupe.8G255100_v2.0.a1 |
| pyrus_communis | pycom03g22230 |
| rosa_chinensis | RchiOBHm_Chr6g0293001 |
| rosa_laevigata | RLG00000011975 |
| rosa_multiflora | Rmu_sc0001788.1_g000005 Rmu_sc0003615.1_g000002 Rmu_sc0028741.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00174480 |
| rosa_rugosa | Rorug06G0231900 Rorug06G0232000 |
| rosa_samantha | Rh6AG344700 Rh6BG352100 Rh6CG359300 Rh6DG344800 |
| rosa_wichuraiana | Rw6G030080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2408 |
| Acc36I | ACCTGC | 1 cut(s) | 776 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccI | GTMKAC | 3 cut(s) | 543, 1137, 1564 |
| AccII | CGCG | 1 cut(s) | 1705 |
| AciI | CCGC | 6 cut(s) | 124, 1091, 1703, 1705, 1956, 2271 |
| AcoI | YGGCCR | 5 cut(s) | 584, 1614, 1879, 2160, 2236 |
| AcsI | RAATTY | 5 cut(s) | 961, 1029, 1433, 1644, 1871 |
| AcuI | CTGAAG | 2 cut(s) | 1296, 2484 |
| AfaI | GTAC | 5 cut(s) | 413, 558, 1089, 1712, 2172 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 331, 626, 1691 |
| AflIII | ACRYGT | 1 cut(s) | 2122 |
| AjiI | CACGTC | 1 cut(s) | 1042 |
| AjnI | CCWGG | 6 cut(s) | 667, 704, 1816, 1972, 2458, 2466 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 40, 72, 1154, 1186, 1326, 1358 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 248, 280, 625, 657, 1658, 1690 |
| AluBI | AGCT | 9 cut(s) | 374, 760, 922, 1543, 1791, 1890, 2117, 2276, 2504 |
| AluI | AGCT | 9 cut(s) | 374, 760, 922, 1543, 1791, 1890, 2117, 2276, 2504 |
| Alw21I | GWGCWC | 1 cut(s) | 300 |
| Alw26I | GTCTC | 3 cut(s) | 704, 1209, 2135 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 565 |
| Ama87I | CYCGRG | 1 cut(s) | 1188 |
| AoxI | GGCC | 8 cut(s) | 584, 972, 1120, 1614, 1801, 1879, 2160, 2236 |
| ApeKI | GCWGC | 6 cut(s) | 290, 1733, 1788, 2189, 2273, 2396 |
| ApoI | RAATTY | 5 cut(s) | 961, 1029, 1433, 1644, 1871 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1935, 2124 |
| AspLEI | GCGC | 3 cut(s) | 1816, 2374, 2446 |
| AspS9I | GGNCC | 3 cut(s) | 1120, 1226, 1802 |
| AsuC2I | CCSGG | 1 cut(s) | 332 |
| AsuHPI | GGTGA | 6 cut(s) | 36, 113, 153, 233, 597, 1988 |
| AsuII | TTCGAA | 1 cut(s) | 254 |
| AvaI | CYCGRG | 1 cut(s) | 1188 |
| AvaII | GGWCC | 1 cut(s) | 1226 |
| AxyI | CCTNAGG | 1 cut(s) | 1662 |
| BaeGI | GKGCMC | 1 cut(s) | 393 |
| BalI | TGGCCA | 5 cut(s) | 586, 1616, 1881, 2162, 2238 |
| BamHI | GGATCC | 2 cut(s) | 810, 2462 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 2031 |
| BbsI | GAAGAC | 3 cut(s) | 670, 1341, 2358 |
| Bbv12I | GWGCWC | 1 cut(s) | 300 |
| BbvI | GCAGC | 6 cut(s) | 277, 1745, 1800, 2176, 2285, 2383 |
| BccI | CCATC | 7 cut(s) | 401, 619, 800, 1226, 1625, 1813, 2012 |
| BceAI | ACGGC | 1 cut(s) | 1816 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 263, 297, 1757, 1791 |
| BciT130I | CCWGG | 6 cut(s) | 669, 706, 1818, 1974, 2460, 2468 |
| BciVI | GTATCC | 1 cut(s) | 354 |
| BclI | TGATCA | 2 cut(s) | 1114, 2052 |
| BcnI | CCSGG | 1 cut(s) | 332 |
| BcoDI | GTCTC | 3 cut(s) | 704, 1209, 2135 |
| BfaI | CTAG | 6 cut(s) | 903, 1142, 1320, 1895, 1986, 2247 |
| BfmI | CTRYAG | 2 cut(s) | 2190, 2397 |
| BfoI | RGCGCY | 1 cut(s) | 1817 |
| BfuAI | ACCTGC | 1 cut(s) | 776 |
| BfuI | GTATCC | 1 cut(s) | 354 |
| BisI | GCNGC | 8 cut(s) | 291, 1734, 1789, 1957, 2190, 2271, 2274, 2397 |
| BlpI | GCTNAGC | 1 cut(s) | 840 |
| BlsI | GCNGC | 8 cut(s) | 292, 1735, 1790, 1958, 2191, 2272, 2275, 2398 |
| Bme1390I | CCNGG | 7 cut(s) | 332, 669, 706, 1818, 1974, 2460, 2468 |
| Bme18I | GGWCC | 1 cut(s) | 1226 |
| BmeT110I | CYCGRG | 1 cut(s) | 1188 |
| BmgBI | CACGTC | 1 cut(s) | 1042 |
| BmgT120I | GGNCC | 3 cut(s) | 1120, 1226, 1802 |
| BmiI | GGNNCC | 4 cut(s) | 6, 742, 812, 2464 |
| BmrFI | CCNGG | 7 cut(s) | 332, 669, 706, 1818, 1974, 2460, 2468 |
| BpiI | GAAGAC | 3 cut(s) | 670, 1341, 2358 |
| BpmI | CTGGAG | 1 cut(s) | 2489 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 840 |
| Bpu14I | TTCGAA | 1 cut(s) | 254 |
| BpuMI | CCSGG | 1 cut(s) | 332 |
| BsaBI | GATNNNNATC | 2 cut(s) | 342, 2071 |
| BsaI | GGTCTC | 1 cut(s) | 704 |
| BsaWI | WCCGGW | 1 cut(s) | 1391 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 434, 464, 1658, 1688 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 331, 626, 1691 |
| Bse118I | RCCGGY | 1 cut(s) | 1498 |
| Bse1I | ACTGG | 4 cut(s) | 26, 908, 961, 1617 |
| Bse21I | CCTNAGG | 1 cut(s) | 1662 |
| Bse3DI | GCAATG | 3 cut(s) | 468, 1016, 2367 |
| Bse8I | GATNNNNATC | 2 cut(s) | 342, 2071 |
| BseBI | CCWGG | 6 cut(s) | 669, 706, 1818, 1974, 2460, 2468 |
| BseGI | GGATG | 7 cut(s) | 466, 727, 1078, 1198, 1283, 1588, 1933 |
| BseJI | GATNNNNATC | 2 cut(s) | 342, 2071 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 331, 626, 1691 |
| BseMI | GCAATG | 3 cut(s) | 468, 1016, 2367 |
| BseMII | CTCAG | 4 cut(s) | 831, 1199, 1635, 2088 |
| BseNI | ACTGG | 4 cut(s) | 26, 908, 961, 1617 |
| BseRI | GAGGAG | 3 cut(s) | 63, 148, 1225 |
| BseSI | GKGCMC | 1 cut(s) | 393 |
| BseXI | GCAGC | 6 cut(s) | 277, 1745, 1800, 2176, 2285, 2383 |
| BsgI | GTGCAG | 1 cut(s) | 804 |
| Bsh1236I | CGCG | 1 cut(s) | 1705 |
| BshFI | GGCC | 8 cut(s) | 586, 974, 1122, 1616, 1803, 1881, 2162, 2238 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 1 cut(s) | 300 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1188 |
| BsiSI | CCGG | 3 cut(s) | 332, 1392, 1499 |
| BslFI | GGGAC | 2 cut(s) | 288, 2480 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 331, 626, 1691 |
| BsmAI | GTCTC | 3 cut(s) | 704, 1209, 2135 |
| BsmFI | GGGAC | 2 cut(s) | 288, 2480 |
| BsmI | GAATGC | 2 cut(s) | 826, 1304 |
| BsnI | GGCC | 8 cut(s) | 586, 974, 1122, 1616, 1803, 1881, 2162, 2238 |
| Bso31I | GGTCTC | 1 cut(s) | 704 |
| BsoBI | CYCGRG | 1 cut(s) | 1188 |
| Bsp119I | TTCGAA | 1 cut(s) | 254 |
| Bsp1286I | GDGCHC | 3 cut(s) | 300, 393, 2031 |
| Bsp1407I | TGTACA | 1 cut(s) | 556 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 840 |
| Bsp19I | CCATGG | 3 cut(s) | 234, 347, 2163 |
| BspACI | CCGC | 6 cut(s) | 124, 1091, 1703, 1705, 1956, 2271 |
| BspANI | GGCC | 8 cut(s) | 586, 974, 1122, 1616, 1803, 1881, 2162, 2238 |
| BspCNI | CTCAG | 4 cut(s) | 832, 1200, 1634, 2089 |
| BspFNI | CGCG | 1 cut(s) | 1705 |
| BspHI | TCATGA | 1 cut(s) | 2014 |
| BspLI | GGNNCC | 4 cut(s) | 6, 742, 812, 2464 |
| BspMAI | CTGCAG | 2 cut(s) | 2194, 2401 |
| BspMI | ACCTGC | 1 cut(s) | 776 |
| BspT104I | TTCGAA | 1 cut(s) | 254 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTNI | GGTCTC | 1 cut(s) | 704 |
| BsrDI | GCAATG | 3 cut(s) | 468, 1016, 2367 |
| BsrFI | RCCGGY | 1 cut(s) | 1498 |
| BsrGI | TGTACA | 1 cut(s) | 556 |
| BsrI | ACTGG | 4 cut(s) | 26, 908, 961, 1617 |
| BssAI | RCCGGY | 1 cut(s) | 1498 |
| BssNAI | GTATAC | 1 cut(s) | 544 |
| BssT1I | CCWWGG | 4 cut(s) | 222, 234, 347, 2163 |
| Bst1107I | GTATAC | 1 cut(s) | 544 |
| Bst2UI | CCWGG | 6 cut(s) | 669, 706, 1818, 1974, 2460, 2468 |
| Bst4CI | ACNGT | 5 cut(s) | 302, 595, 1400, 2206, 2305 |
| Bst6I | CTCTTC | 5 cut(s) | 58, 85, 186, 351, 2328 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1184, 1256, 2279 |
| BstAUI | TGTACA | 1 cut(s) | 556 |
| BstBI | TTCGAA | 1 cut(s) | 254 |
| BstC8I | GCNNGC | 5 cut(s) | 584, 1082, 1535, 1892, 2268 |
| BstDEI | CTNAG | 5 cut(s) | 840, 1208, 1621, 1662, 2097 |
| BstDSI | CCRYGG | 4 cut(s) | 234, 347, 1703, 2163 |
| BstF5I | GGATG | 7 cut(s) | 466, 727, 1078, 1198, 1283, 1588, 1933 |
| BstFNI | CGCG | 1 cut(s) | 1705 |
| BstH2I | RGCGCY | 1 cut(s) | 1817 |
| BstHHI | GCGC | 3 cut(s) | 1816, 2374, 2446 |
| BstMAI | GTCTC | 3 cut(s) | 704, 1209, 2135 |
| BstNI | CCWGG | 6 cut(s) | 669, 706, 1818, 1974, 2460, 2468 |
| BstNSI | RCATGY | 5 cut(s) | 423, 1088, 2126, 2200, 2266 |
| BstSCI | CCNGG | 7 cut(s) | 330, 667, 704, 1816, 1972, 2458, 2466 |
| BstSFI | CTRYAG | 2 cut(s) | 2190, 2397 |
| BstSLI | GKGCMC | 1 cut(s) | 393 |
| BstUI | CGCG | 1 cut(s) | 1705 |
| BstV1I | GCAGC | 6 cut(s) | 277, 1745, 1800, 2176, 2285, 2383 |
| BstV2I | GAAGAC | 3 cut(s) | 670, 1341, 2358 |
| BstX2I | RGATCY | 5 cut(s) | 810, 884, 1861, 2317, 2462 |
| BstYI | RGATCY | 5 cut(s) | 810, 884, 1861, 2317, 2462 |
| BstZ17I | GTATAC | 1 cut(s) | 544 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1662 |
| BsuI | GTATCC | 1 cut(s) | 354 |
| BsuRI | GGCC | 8 cut(s) | 586, 974, 1122, 1616, 1803, 1881, 2162, 2238 |
| BtgI | CCRYGG | 4 cut(s) | 234, 347, 1703, 2163 |
| BtrI | CACGTC | 1 cut(s) | 1042 |
| BtsCI | GGATG | 7 cut(s) | 466, 727, 1078, 1198, 1283, 1588, 1933 |
| BtsI | GCAGTG | 1 cut(s) | 2446 |
| BtsIMutI | CAGTG | 4 cut(s) | 587, 600, 2202, 2446 |
| BveI | ACCTGC | 1 cut(s) | 776 |
| Cac8I | GCNNGC | 5 cut(s) | 584, 1082, 1535, 1892, 2268 |
| CaiI | CAGNNNCTG | 1 cut(s) | 565 |
| CciI | TCATGA | 1 cut(s) | 2014 |
| CfoI | GCGC | 3 cut(s) | 1816, 2374, 2446 |
| Cfr10I | RCCGGY | 1 cut(s) | 1498 |
| Cfr13I | GGNCC | 3 cut(s) | 1120, 1226, 1802 |
| Cfr42I | CCGCGG | 1 cut(s) | 1706 |
| CseI | GACGC | 1 cut(s) | 818 |
| Csp6I | GTAC | 5 cut(s) | 412, 557, 1088, 1711, 2171 |
| CviQI | GTAC | 5 cut(s) | 412, 557, 1088, 1711, 2171 |
| DdeI | CTNAG | 5 cut(s) | 840, 1208, 1621, 1662, 2097 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2408 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2408 |
| EaeI | YGGCCR | 5 cut(s) | 584, 1614, 1879, 2160, 2236 |
| Eam1104I | CTCTTC | 5 cut(s) | 58, 85, 186, 351, 2328 |
| EarI | CTCTTC | 5 cut(s) | 58, 85, 186, 351, 2328 |
| Eco130I | CCWWGG | 4 cut(s) | 222, 234, 347, 2163 |
| Eco24I | GRGCYC | 1 cut(s) | 2031 |
| Eco31I | GGTCTC | 1 cut(s) | 704 |
| Eco47I | GGWCC | 1 cut(s) | 1226 |
| Eco57I | CTGAAG | 2 cut(s) | 1296, 2484 |
| Eco81I | CCTNAGG | 1 cut(s) | 1662 |
| Eco88I | CYCGRG | 1 cut(s) | 1188 |
| EcoRI | GAATTC | 2 cut(s) | 1029, 1433 |
| EcoRII | CCWGG | 6 cut(s) | 667, 704, 1816, 1972, 2458, 2466 |
| EcoT14I | CCWWGG | 4 cut(s) | 222, 234, 347, 2163 |
| EcoT22I | ATGCAT | 3 cut(s) | 1016, 1180, 2284 |
| EcoT38I | GRGCYC | 1 cut(s) | 2031 |
| ErhI | CCWWGG | 4 cut(s) | 222, 234, 347, 2163 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1326, 1358, 1664, 1696 |
| FaqI | GGGAC | 2 cut(s) | 288, 2480 |
| FauI | CCCGC | 1 cut(s) | 1698 |
| FauNDI | CATATG | 1 cut(s) | 2287 |
| FbaI | TGATCA | 2 cut(s) | 1114, 2052 |
| FblI | GTMKAC | 3 cut(s) | 543, 1137, 1564 |
| Fnu4HI | GCNGC | 8 cut(s) | 291, 1734, 1789, 1957, 2190, 2271, 2274, 2397 |
| FokI | GGATG | 7 cut(s) | 473, 734, 1085, 1205, 1270, 1595, 1940 |
| FriOI | GRGCYC | 1 cut(s) | 2031 |
| Fsp4HI | GCNGC | 8 cut(s) | 291, 1734, 1789, 1957, 2190, 2271, 2274, 2397 |
| FspBI | CTAG | 6 cut(s) | 903, 1142, 1320, 1895, 1986, 2247 |
| GlaI | GCGC | 3 cut(s) | 1815, 2373, 2445 |
| GluI | GCNGC | 8 cut(s) | 291, 1734, 1789, 1957, 2190, 2271, 2274, 2397 |
| GsuI | CTGGAG | 1 cut(s) | 2489 |
| HaeII | RGCGCY | 1 cut(s) | 1817 |
| HaeIII | GGCC | 8 cut(s) | 586, 974, 1122, 1616, 1803, 1881, 2162, 2238 |
| HapII | CCGG | 3 cut(s) | 332, 1392, 1499 |
| HgaI | GACGC | 1 cut(s) | 818 |
| HhaI | GCGC | 3 cut(s) | 1816, 2374, 2446 |
| Hin6I | GCGC | 3 cut(s) | 1814, 2372, 2444 |
| HinP1I | GCGC | 3 cut(s) | 1814, 2372, 2444 |
| HincII | GTYRAC | 2 cut(s) | 777, 1565 |
| HindII | GTYRAC | 2 cut(s) | 777, 1565 |
| HindIII | AAGCTT | 1 cut(s) | 1541 |
| HinfI | GANTC | 5 cut(s) | 449, 863, 916, 1271, 2386 |
| HpaII | CCGG | 3 cut(s) | 332, 1392, 1499 |
| HphI | GGTGA | 6 cut(s) | 36, 113, 153, 233, 597, 1988 |
| Hpy166II | GTNNAC | 5 cut(s) | 544, 777, 1002, 1138, 1565 |
| Hpy8I | GTNNAC | 5 cut(s) | 544, 777, 1002, 1138, 1565 |
| Hpy99I | CGWCG | 1 cut(s) | 1046 |
| HpyCH4III | ACNGT | 5 cut(s) | 302, 595, 1400, 2206, 2305 |
| HpyCH4IV | ACGT | 2 cut(s) | 435, 1041 |
| HpyF3I | CTNAG | 5 cut(s) | 840, 1208, 1621, 1662, 2097 |
| HpySE526I | ACGT | 2 cut(s) | 435, 1041 |
| HspAI | GCGC | 3 cut(s) | 1814, 2372, 2444 |
| Ksp22I | TGATCA | 2 cut(s) | 1114, 2052 |
| KspI | CCGCGG | 1 cut(s) | 1706 |
| LmnI | GCTCC | 2 cut(s) | 740, 1301 |
| Lsp1109I | GCAGC | 6 cut(s) | 277, 1745, 1800, 2176, 2285, 2383 |
| MaeI | CTAG | 6 cut(s) | 903, 1142, 1320, 1895, 1986, 2247 |
| MaeII | ACGT | 2 cut(s) | 435, 1041 |
| MaeIII | GTNAC | 3 cut(s) | 431, 1394, 1400 |
| MfeI | CAATTG | 3 cut(s) | 405, 750, 1905 |
| MflI | RGATCY | 5 cut(s) | 810, 884, 1861, 2317, 2462 |
| MhlI | GDGCHC | 3 cut(s) | 300, 393, 2031 |
| MlsI | TGGCCA | 5 cut(s) | 586, 1616, 1881, 2162, 2238 |
| MluNI | TGGCCA | 5 cut(s) | 586, 1616, 1881, 2162, 2238 |
| MlyI | GAGTC | 1 cut(s) | 458 |
| MmeI | TCCRAC | 3 cut(s) | 927, 1024, 2345 |
| Mox20I | TGGCCA | 5 cut(s) | 586, 1616, 1881, 2162, 2238 |
| Mph1103I | ATGCAT | 3 cut(s) | 1016, 1180, 2284 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1935, 2124 |
| MscI | TGGCCA | 5 cut(s) | 586, 1616, 1881, 2162, 2238 |
| MseI | TTAA | 5 cut(s) | 675, 1365, 1965, 2150, 2177 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1581, 2162 |
| Msp20I | TGGCCA | 5 cut(s) | 586, 1616, 1881, 2162, 2238 |
| MspA1I | CMGCKG | 4 cut(s) | 760, 922, 1705, 1890 |
| MspI | CCGG | 3 cut(s) | 332, 1392, 1499 |
| MspR9I | CCNGG | 7 cut(s) | 332, 669, 706, 1818, 1974, 2460, 2468 |
| MunI | CAATTG | 3 cut(s) | 405, 750, 1905 |
| Mva1269I | GAATGC | 2 cut(s) | 826, 1304 |
| MvaI | CCWGG | 6 cut(s) | 669, 706, 1818, 1974, 2460, 2468 |
| MvnI | CGCG | 1 cut(s) | 1705 |
| NciI | CCSGG | 1 cut(s) | 332 |
| NcoI | CCATGG | 3 cut(s) | 234, 347, 2163 |
| NdeI | CATATG | 1 cut(s) | 2287 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 742, 812, 2464 |
| NmeAIII | GCCGAG | 1 cut(s) | 319 |
| NmuCI | GTSAC | 2 cut(s) | 431, 1400 |
| NsiI | ATGCAT | 3 cut(s) | 1016, 1180, 2284 |
| NspI | RCATGY | 5 cut(s) | 423, 1088, 2126, 2200, 2266 |
| NspV | TTCGAA | 1 cut(s) | 254 |
| PagI | TCATGA | 1 cut(s) | 2014 |
| PciI | ACATGT | 1 cut(s) | 2122 |
| PctI | GAATGC | 2 cut(s) | 826, 1304 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1935, 2124 |
| PfeI | GAWTC | 4 cut(s) | 863, 916, 1271, 2386 |
| PkrI | GCNGC | 8 cut(s) | 292, 1735, 1790, 1958, 2191, 2272, 2275, 2398 |
| PleI | GAGTC | 1 cut(s) | 457 |
| PpsI | GAGTC | 1 cut(s) | 457 |
| PscI | ACATGT | 1 cut(s) | 2122 |
| Psp6I | CCWGG | 6 cut(s) | 667, 704, 1816, 1972, 2458, 2466 |
| PspGI | CCWGG | 6 cut(s) | 667, 704, 1816, 1972, 2458, 2466 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 742, 812, 2464 |
| PspPI | GGNCC | 3 cut(s) | 1120, 1226, 1802 |
| PstI | CTGCAG | 2 cut(s) | 2194, 2401 |
| PstNI | CAGNNNCTG | 1 cut(s) | 565 |
| PsuI | RGATCY | 5 cut(s) | 810, 884, 1861, 2317, 2462 |
| PvuII | CAGCTG | 3 cut(s) | 760, 922, 1890 |
| RsaI | GTAC | 5 cut(s) | 413, 558, 1089, 1712, 2172 |
| RsaNI | GTAC | 5 cut(s) | 412, 557, 1088, 1711, 2171 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1581, 2162 |
| SacII | CCGCGG | 1 cut(s) | 1706 |
| SalI | GTCGAC | 1 cut(s) | 1563 |
| SaqAI | TTAA | 5 cut(s) | 675, 1365, 1965, 2150, 2177 |
| SatI | GCNGC | 8 cut(s) | 291, 1734, 1789, 1957, 2190, 2271, 2274, 2397 |
| Sau96I | GGNCC | 3 cut(s) | 1120, 1226, 1802 |
| SchI | GAGTC | 1 cut(s) | 458 |
| ScrFI | CCNGG | 7 cut(s) | 332, 669, 706, 1818, 1974, 2460, 2468 |
| SduI | GDGCHC | 3 cut(s) | 300, 393, 2031 |
| SfcI | CTRYAG | 2 cut(s) | 2190, 2397 |
| Sfr303I | CCGCGG | 1 cut(s) | 1706 |
| SfuI | TTCGAA | 1 cut(s) | 254 |
| SgrBI | CCGCGG | 1 cut(s) | 1706 |
| SinI | GGWCC | 1 cut(s) | 1226 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1581, 2162 |
| SsiI | CCGC | 6 cut(s) | 124, 1091, 1703, 1705, 1956, 2271 |
| SspI | AATATT | 1 cut(s) | 1935 |
| SspMI | CTAG | 6 cut(s) | 903, 1142, 1320, 1895, 1986, 2247 |
| StyD4I | CCNGG | 7 cut(s) | 330, 667, 704, 1816, 1972, 2458, 2466 |
| StyI | CCWWGG | 4 cut(s) | 222, 234, 347, 2163 |
| TaaI | ACNGT | 5 cut(s) | 302, 595, 1400, 2206, 2305 |
| TaiI | ACGT | 2 cut(s) | 438, 1044 |
| TaqI | TCGA | 7 cut(s) | 205, 254, 376, 447, 1515, 1564, 1777 |
| TatI | WGTACW | 2 cut(s) | 556, 1710 |
| TauI | GCSGC | 2 cut(s) | 1959, 2273 |
| TfiI | GAWTC | 4 cut(s) | 863, 916, 1271, 2386 |
| Tru1I | TTAA | 5 cut(s) | 675, 1365, 1965, 2150, 2177 |
| Tru9I | TTAA | 5 cut(s) | 675, 1365, 1965, 2150, 2177 |
| TscAI | CASTG | 4 cut(s) | 594, 600, 2209, 2446 |
| TseFI | GTSAC | 2 cut(s) | 431, 1400 |
| TseI | GCWGC | 6 cut(s) | 290, 1733, 1788, 2189, 2273, 2396 |
| Tsp45I | GTSAC | 2 cut(s) | 431, 1400 |
| TspDTI | ATGAA | 7 cut(s) | 118, 477, 993, 1446, 1671, 1884, 1944 |
| TspRI | CASTG | 4 cut(s) | 594, 600, 2209, 2446 |
| VpaK11BI | GGWCC | 1 cut(s) | 1226 |
| XapI | RAATTY | 5 cut(s) | 961, 1029, 1433, 1644, 1871 |
| XceI | RCATGY | 5 cut(s) | 423, 1088, 2126, 2200, 2266 |
| XmiI | GTMKAC | 3 cut(s) | 543, 1137, 1564 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1935, 2124 |
| XspI | CTAG | 6 cut(s) | 903, 1142, 1320, 1895, 1986, 2247 |
| Zsp2I | ATGCAT | 3 cut(s) | 1016, 1180, 2284 |