Spermatogenesis-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G03200 AT4G03200 |
| fragaria_vesca | FvH4_2g25030 |
| malus_domestica | MD03G1280600.v1.1 |
| prunus_persica | Prupe.8G255100_v2.0.a1 |
| pyrus_communis | pycom03g22230 |
| rosa_chinensis | RchiOBHm_Chr6g0293001 |
| rosa_laevigata | RLG00000011975 |
| rosa_multiflora | Rmu_sc0001788.1_g000005 Rmu_sc0003615.1_g000002 Rmu_sc0028741.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00174480 |
| rosa_rugosa | Rorug06G0231900 Rorug06G0232000 |
| rosa_samantha | Rh6AG344700 Rh6BG352100 Rh6CG359300 Rh6DG344800 |
| rosa_wichuraiana | Rw6G030080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 779 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1694 |
| AccI | GTMKAC | 3 cut(s) | 546, 1140, 1567 |
| AccII | CGCG | 1 cut(s) | 1708 |
| AciI | CCGC | 7 cut(s) | 1094, 1706, 1708, 1956, 1959, 2135, 2274 |
| AclWI | GGATC | 8 cut(s) | 522, 895, 1418, 1697, 1872, 2315, 2460, 2473 |
| AcoI | YGGCCR | 5 cut(s) | 587, 1617, 1882, 2163, 2239 |
| AcsI | RAATTY | 6 cut(s) | 964, 1032, 1436, 1490, 1647, 1874 |
| AcuI | CTGAAG | 2 cut(s) | 1299, 2487 |
| AcvI | CACGTG | 1 cut(s) | 423 |
| AdeI | CACNNNGTG | 1 cut(s) | 1979 |
| AfaI | GTAC | 4 cut(s) | 561, 1092, 1715, 2175 |
| AfeI | AGCGCT | 1 cut(s) | 128 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 334, 629, 1694 |
| AflIII | ACRYGT | 1 cut(s) | 2125 |
| AjnI | CCWGG | 5 cut(s) | 670, 707, 1819, 1975, 2469 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1157, 1189, 1329, 1361 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 251, 283, 628, 660, 1661, 1693 |
| AluBI | AGCT | 8 cut(s) | 377, 925, 1546, 1794, 1893, 2120, 2279, 2507 |
| AluI | AGCT | 8 cut(s) | 377, 925, 1546, 1794, 1893, 2120, 2279, 2507 |
| Alw21I | GWGCWC | 1 cut(s) | 303 |
| Alw26I | GTCTC | 3 cut(s) | 707, 1212, 2138 |
| AlwI | GGATC | 8 cut(s) | 522, 895, 1418, 1697, 1872, 2315, 2460, 2473 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 568 |
| Ama87I | CYCGRG | 1 cut(s) | 1191 |
| Aor51HI | AGCGCT | 1 cut(s) | 128 |
| AoxI | GGCC | 8 cut(s) | 587, 975, 1123, 1617, 1804, 1882, 2163, 2239 |
| ApeKI | GCWGC | 6 cut(s) | 293, 1736, 2192, 2276, 2399, 2414 |
| ApoI | RAATTY | 6 cut(s) | 964, 1032, 1436, 1490, 1647, 1874 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1938, 2127 |
| AspLEI | GCGC | 4 cut(s) | 129, 1819, 2377, 2449 |
| AspS9I | GGNCC | 3 cut(s) | 1123, 1229, 1805 |
| AsuC2I | CCSGG | 2 cut(s) | 335, 2463 |
| AsuHPI | GGTGA | 5 cut(s) | 36, 156, 236, 600, 1991 |
| AsuII | TTCGAA | 1 cut(s) | 257 |
| AvaI | CYCGRG | 1 cut(s) | 1191 |
| AvaII | GGWCC | 1 cut(s) | 1229 |
| AxyI | CCTNAGG | 1 cut(s) | 1665 |
| BaeGI | GKGCMC | 1 cut(s) | 396 |
| BalI | TGGCCA | 5 cut(s) | 589, 1619, 1884, 2165, 2241 |
| BamHI | GGATCC | 1 cut(s) | 2465 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 2034 |
| BbrPI | CACGTG | 1 cut(s) | 423 |
| BbsI | GAAGAC | 3 cut(s) | 673, 1344, 2361 |
| Bbv12I | GWGCWC | 1 cut(s) | 303 |
| BbvI | GCAGC | 6 cut(s) | 280, 1748, 2179, 2288, 2386, 2401 |
| BccI | CCATC | 7 cut(s) | 404, 622, 803, 1229, 1628, 1816, 2015 |
| BceAI | ACGGC | 1 cut(s) | 1819 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 266, 300, 1760, 1794 |
| BciT130I | CCWGG | 5 cut(s) | 672, 709, 1821, 1977, 2471 |
| BciVI | GTATCC | 2 cut(s) | 357, 407 |
| BclI | TGATCA | 2 cut(s) | 1117, 2055 |
| BcnI | CCSGG | 2 cut(s) | 335, 2463 |
| BcoDI | GTCTC | 3 cut(s) | 707, 1212, 2138 |
| BfaI | CTAG | 6 cut(s) | 906, 1145, 1323, 1898, 1989, 2250 |
| BfmI | CTRYAG | 2 cut(s) | 2193, 2400 |
| BfoI | RGCGCY | 2 cut(s) | 130, 1820 |
| BfuAI | ACCTGC | 1 cut(s) | 779 |
| BfuI | GTATCC | 2 cut(s) | 357, 407 |
| BisI | GCNGC | 9 cut(s) | 294, 1737, 1957, 1960, 2193, 2274, 2277, 2400, 2415 |
| BlpI | GCTNAGC | 1 cut(s) | 843 |
| BlsI | GCNGC | 9 cut(s) | 295, 1738, 1958, 1961, 2194, 2275, 2278, 2401, 2416 |
| Bme1390I | CCNGG | 7 cut(s) | 335, 672, 709, 1821, 1977, 2463, 2471 |
| Bme18I | GGWCC | 1 cut(s) | 1229 |
| BmeT110I | CYCGRG | 1 cut(s) | 1191 |
| BmgT120I | GGNCC | 3 cut(s) | 1123, 1229, 1805 |
| BmiI | GGNNCC | 3 cut(s) | 6, 745, 2467 |
| BmrFI | CCNGG | 7 cut(s) | 335, 672, 709, 1821, 1977, 2463, 2471 |
| BpiI | GAAGAC | 3 cut(s) | 673, 1344, 2361 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1411, 1443 |
| BpmI | CTGGAG | 2 cut(s) | 1396, 2492 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 843 |
| Bpu14I | TTCGAA | 1 cut(s) | 257 |
| BpuMI | CCSGG | 2 cut(s) | 335, 2463 |
| BsaAI | YACGTR | 1 cut(s) | 423 |
| BsaBI | GATNNNNATC | 2 cut(s) | 345, 2074 |
| BsaI | GGTCTC | 1 cut(s) | 707 |
| BsaJI | CCNNGG | 9 cut(s) | 225, 237, 350, 708, 1479, 1706, 2166, 2461, 2469 |
| BsaWI | WCCGGW | 1 cut(s) | 1394 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 437, 467, 1661, 1691 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 334, 629, 1694 |
| Bse118I | RCCGGY | 1 cut(s) | 1501 |
| Bse1I | ACTGG | 4 cut(s) | 911, 964, 1620, 1688 |
| Bse21I | CCTNAGG | 1 cut(s) | 1665 |
| Bse3DI | GCAATG | 2 cut(s) | 1019, 2370 |
| Bse8I | GATNNNNATC | 2 cut(s) | 345, 2074 |
| BseBI | CCWGG | 5 cut(s) | 672, 709, 1821, 1977, 2471 |
| BseDI | CCNNGG | 9 cut(s) | 225, 237, 350, 708, 1479, 1706, 2166, 2461, 2469 |
| BseGI | GGATG | 7 cut(s) | 469, 730, 1081, 1201, 1286, 1591, 1936 |
| BseJI | GATNNNNATC | 2 cut(s) | 345, 2074 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 334, 629, 1694 |
| BseMI | GCAATG | 2 cut(s) | 1019, 2370 |
| BseMII | CTCAG | 5 cut(s) | 137, 834, 1202, 1638, 2091 |
| BseNI | ACTGG | 4 cut(s) | 911, 964, 1620, 1688 |
| BseRI | GAGGAG | 3 cut(s) | 66, 151, 1228 |
| BseSI | GKGCMC | 1 cut(s) | 396 |
| BseXI | GCAGC | 6 cut(s) | 280, 1748, 2179, 2288, 2386, 2401 |
| BsgI | GTGCAG | 1 cut(s) | 807 |
| Bsh1236I | CGCG | 1 cut(s) | 1708 |
| BshFI | GGCC | 8 cut(s) | 589, 977, 1125, 1619, 1806, 1884, 2165, 2241 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 1 cut(s) | 303 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1191 |
| BsiSI | CCGG | 4 cut(s) | 335, 1395, 1502, 2463 |
| BslFI | GGGAC | 1 cut(s) | 2483 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 334, 629, 1694 |
| BsmAI | GTCTC | 3 cut(s) | 707, 1212, 2138 |
| BsmFI | GGGAC | 1 cut(s) | 2483 |
| BsmI | GAATGC | 2 cut(s) | 829, 1307 |
| BsnI | GGCC | 8 cut(s) | 589, 977, 1125, 1619, 1806, 1884, 2165, 2241 |
| Bso31I | GGTCTC | 1 cut(s) | 707 |
| BsoBI | CYCGRG | 1 cut(s) | 1191 |
| Bsp119I | TTCGAA | 1 cut(s) | 257 |
| Bsp1286I | GDGCHC | 3 cut(s) | 303, 396, 2034 |
| Bsp1407I | TGTACA | 1 cut(s) | 559 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 843 |
| Bsp19I | CCATGG | 3 cut(s) | 237, 350, 2166 |
| BspACI | CCGC | 7 cut(s) | 1094, 1706, 1708, 1956, 1959, 2135, 2274 |
| BspANI | GGCC | 8 cut(s) | 589, 977, 1125, 1619, 1806, 1884, 2165, 2241 |
| BspCNI | CTCAG | 5 cut(s) | 136, 835, 1203, 1637, 2092 |
| BspFNI | CGCG | 1 cut(s) | 1708 |
| BspHI | TCATGA | 1 cut(s) | 2017 |
| BspLI | GGNNCC | 3 cut(s) | 6, 745, 2467 |
| BspMAI | CTGCAG | 2 cut(s) | 2197, 2404 |
| BspMI | ACCTGC | 1 cut(s) | 779 |
| BspPI | GGATC | 8 cut(s) | 522, 895, 1418, 1697, 1872, 2315, 2460, 2473 |
| BspT104I | TTCGAA | 1 cut(s) | 257 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTNI | GGTCTC | 1 cut(s) | 707 |
| BsrDI | GCAATG | 2 cut(s) | 1019, 2370 |
| BsrFI | RCCGGY | 1 cut(s) | 1501 |
| BsrGI | TGTACA | 1 cut(s) | 559 |
| BsrI | ACTGG | 4 cut(s) | 911, 964, 1620, 1688 |
| BssAI | RCCGGY | 1 cut(s) | 1501 |
| BssECI | CCNNGG | 9 cut(s) | 225, 237, 350, 708, 1479, 1706, 2166, 2461, 2469 |
| BssNAI | GTATAC | 1 cut(s) | 547 |
| BssT1I | CCWWGG | 4 cut(s) | 225, 237, 350, 2166 |
| Bst1107I | GTATAC | 1 cut(s) | 547 |
| Bst2UI | CCWGG | 5 cut(s) | 672, 709, 1821, 1977, 2471 |
| Bst4CI | ACNGT | 5 cut(s) | 598, 762, 1403, 2209, 2308 |
| Bst6I | CTCTTC | 7 cut(s) | 58, 64, 88, 142, 189, 354, 2331 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1187, 1259, 2282 |
| BstAUI | TGTACA | 1 cut(s) | 559 |
| BstBAI | YACGTR | 1 cut(s) | 423 |
| BstBI | TTCGAA | 1 cut(s) | 257 |
| BstC8I | GCNNGC | 5 cut(s) | 587, 1085, 1538, 1895, 2271 |
| BstDEI | CTNAG | 6 cut(s) | 123, 843, 1211, 1624, 1665, 2100 |
| BstDSI | CCRYGG | 4 cut(s) | 237, 350, 1706, 2166 |
| BstF5I | GGATG | 7 cut(s) | 469, 730, 1081, 1201, 1286, 1591, 1936 |
| BstFNI | CGCG | 1 cut(s) | 1708 |
| BstH2I | RGCGCY | 2 cut(s) | 130, 1820 |
| BstHHI | GCGC | 4 cut(s) | 129, 1819, 2377, 2449 |
| BstMAI | GTCTC | 3 cut(s) | 707, 1212, 2138 |
| BstNI | CCWGG | 5 cut(s) | 672, 709, 1821, 1977, 2471 |
| BstNSI | RCATGY | 4 cut(s) | 1091, 2129, 2203, 2269 |
| BstSCI | CCNGG | 7 cut(s) | 333, 670, 707, 1819, 1975, 2461, 2469 |
| BstSFI | CTRYAG | 2 cut(s) | 2193, 2400 |
| BstSLI | GKGCMC | 1 cut(s) | 396 |
| BstUI | CGCG | 1 cut(s) | 1708 |
| BstV1I | GCAGC | 6 cut(s) | 280, 1748, 2179, 2288, 2386, 2401 |
| BstV2I | GAAGAC | 3 cut(s) | 673, 1344, 2361 |
| BstX2I | RGATCY | 4 cut(s) | 887, 1864, 2320, 2465 |
| BstYI | RGATCY | 4 cut(s) | 887, 1864, 2320, 2465 |
| BstZ17I | GTATAC | 1 cut(s) | 547 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1665 |
| BsuI | GTATCC | 2 cut(s) | 357, 407 |
| BsuRI | GGCC | 8 cut(s) | 589, 977, 1125, 1619, 1806, 1884, 2165, 2241 |
| BtgI | CCRYGG | 4 cut(s) | 237, 350, 1706, 2166 |
| BtsCI | GGATG | 7 cut(s) | 469, 730, 1081, 1201, 1286, 1591, 1936 |
| BtsI | GCAGTG | 1 cut(s) | 2449 |
| BtsIMutI | CAGTG | 3 cut(s) | 590, 2205, 2449 |
| BveI | ACCTGC | 1 cut(s) | 779 |
| Cac8I | GCNNGC | 5 cut(s) | 587, 1085, 1538, 1895, 2271 |
| CaiI | CAGNNNCTG | 1 cut(s) | 568 |
| CciI | TCATGA | 1 cut(s) | 2017 |
| CfoI | GCGC | 4 cut(s) | 129, 1819, 2377, 2449 |
| Cfr10I | RCCGGY | 1 cut(s) | 1501 |
| Cfr13I | GGNCC | 3 cut(s) | 1123, 1229, 1805 |
| Cfr42I | CCGCGG | 1 cut(s) | 1709 |
| CseI | GACGC | 1 cut(s) | 821 |
| CsiI | ACCWGGT | 1 cut(s) | 1975 |
| Csp6I | GTAC | 4 cut(s) | 560, 1091, 1714, 2174 |
| CviQI | GTAC | 4 cut(s) | 560, 1091, 1714, 2174 |
| DdeI | CTNAG | 6 cut(s) | 123, 843, 1211, 1624, 1665, 2100 |
| DraIII | CACNNNGTG | 1 cut(s) | 1979 |
| EaeI | YGGCCR | 5 cut(s) | 587, 1617, 1882, 2163, 2239 |
| Eam1104I | CTCTTC | 7 cut(s) | 58, 64, 88, 142, 189, 354, 2331 |
| EarI | CTCTTC | 7 cut(s) | 58, 64, 88, 142, 189, 354, 2331 |
| Eco130I | CCWWGG | 4 cut(s) | 225, 237, 350, 2166 |
| Eco24I | GRGCYC | 1 cut(s) | 2034 |
| Eco31I | GGTCTC | 1 cut(s) | 707 |
| Eco47I | GGWCC | 1 cut(s) | 1229 |
| Eco47III | AGCGCT | 1 cut(s) | 128 |
| Eco57I | CTGAAG | 2 cut(s) | 1299, 2487 |
| Eco72I | CACGTG | 1 cut(s) | 423 |
| Eco81I | CCTNAGG | 1 cut(s) | 1665 |
| Eco88I | CYCGRG | 1 cut(s) | 1191 |
| EcoRI | GAATTC | 2 cut(s) | 1032, 1436 |
| EcoRII | CCWGG | 5 cut(s) | 670, 707, 1819, 1975, 2469 |
| EcoT14I | CCWWGG | 4 cut(s) | 225, 237, 350, 2166 |
| EcoT22I | ATGCAT | 3 cut(s) | 1019, 1183, 2287 |
| EcoT38I | GRGCYC | 1 cut(s) | 2034 |
| ErhI | CCWWGG | 4 cut(s) | 225, 237, 350, 2166 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1329, 1361, 1667, 1699 |
| FaqI | GGGAC | 1 cut(s) | 2483 |
| FauI | CCCGC | 1 cut(s) | 1701 |
| FauNDI | CATATG | 1 cut(s) | 2290 |
| FbaI | TGATCA | 2 cut(s) | 1117, 2055 |
| FblI | GTMKAC | 3 cut(s) | 546, 1140, 1567 |
| Fnu4HI | GCNGC | 9 cut(s) | 294, 1737, 1957, 1960, 2193, 2274, 2277, 2400, 2415 |
| FokI | GGATG | 7 cut(s) | 476, 737, 1088, 1208, 1273, 1598, 1943 |
| FriOI | GRGCYC | 1 cut(s) | 2034 |
| Fsp4HI | GCNGC | 9 cut(s) | 294, 1737, 1957, 1960, 2193, 2274, 2277, 2400, 2415 |
| FspBI | CTAG | 6 cut(s) | 906, 1145, 1323, 1898, 1989, 2250 |
| GlaI | GCGC | 4 cut(s) | 128, 1818, 2376, 2448 |
| GluI | GCNGC | 9 cut(s) | 294, 1737, 1957, 1960, 2193, 2274, 2277, 2400, 2415 |
| GsuI | CTGGAG | 2 cut(s) | 1396, 2492 |
| HaeII | RGCGCY | 2 cut(s) | 130, 1820 |
| HaeIII | GGCC | 8 cut(s) | 589, 977, 1125, 1619, 1806, 1884, 2165, 2241 |
| HapII | CCGG | 4 cut(s) | 335, 1395, 1502, 2463 |
| HgaI | GACGC | 1 cut(s) | 821 |
| HhaI | GCGC | 4 cut(s) | 129, 1819, 2377, 2449 |
| Hin6I | GCGC | 4 cut(s) | 127, 1817, 2375, 2447 |
| HinP1I | GCGC | 4 cut(s) | 127, 1817, 2375, 2447 |
| HincII | GTYRAC | 2 cut(s) | 780, 1568 |
| HindII | GTYRAC | 2 cut(s) | 780, 1568 |
| HindIII | AAGCTT | 1 cut(s) | 1544 |
| HinfI | GANTC | 6 cut(s) | 452, 814, 866, 919, 1274, 2389 |
| HpaII | CCGG | 4 cut(s) | 335, 1395, 1502, 2463 |
| HphI | GGTGA | 5 cut(s) | 36, 156, 236, 600, 1991 |
| Hpy166II | GTNNAC | 5 cut(s) | 547, 780, 1005, 1141, 1568 |
| Hpy8I | GTNNAC | 5 cut(s) | 547, 780, 1005, 1141, 1568 |
| HpyCH4III | ACNGT | 5 cut(s) | 598, 762, 1403, 2209, 2308 |
| HpyCH4IV | ACGT | 2 cut(s) | 422, 438 |
| HpyF3I | CTNAG | 6 cut(s) | 123, 843, 1211, 1624, 1665, 2100 |
| HpySE526I | ACGT | 2 cut(s) | 422, 438 |
| HspAI | GCGC | 4 cut(s) | 127, 1817, 2375, 2447 |
| Ksp22I | TGATCA | 2 cut(s) | 1117, 2055 |
| KspI | CCGCGG | 1 cut(s) | 1709 |
| LmnI | GCTCC | 3 cut(s) | 743, 1304, 1791 |
| Lsp1109I | GCAGC | 6 cut(s) | 280, 1748, 2179, 2288, 2386, 2401 |
| MabI | ACCWGGT | 1 cut(s) | 1975 |
| MaeI | CTAG | 6 cut(s) | 906, 1145, 1323, 1898, 1989, 2250 |
| MaeII | ACGT | 2 cut(s) | 422, 438 |
| MaeIII | GTNAC | 3 cut(s) | 434, 1397, 1403 |
| MfeI | CAATTG | 2 cut(s) | 753, 1908 |
| MflI | RGATCY | 4 cut(s) | 887, 1864, 2320, 2465 |
| MhlI | GDGCHC | 3 cut(s) | 303, 396, 2034 |
| MlsI | TGGCCA | 5 cut(s) | 589, 1619, 1884, 2165, 2241 |
| MluNI | TGGCCA | 5 cut(s) | 589, 1619, 1884, 2165, 2241 |
| MlyI | GAGTC | 1 cut(s) | 461 |
| MmeI | TCCRAC | 3 cut(s) | 930, 1027, 2348 |
| Mox20I | TGGCCA | 5 cut(s) | 589, 1619, 1884, 2165, 2241 |
| Mph1103I | ATGCAT | 3 cut(s) | 1019, 1183, 2287 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1938, 2127 |
| MscI | TGGCCA | 5 cut(s) | 589, 1619, 1884, 2165, 2241 |
| MseI | TTAA | 5 cut(s) | 678, 1368, 1968, 2153, 2180 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1041, 1584, 2165 |
| Msp20I | TGGCCA | 5 cut(s) | 589, 1619, 1884, 2165, 2241 |
| MspA1I | CMGCKG | 3 cut(s) | 925, 1708, 1893 |
| MspI | CCGG | 4 cut(s) | 335, 1395, 1502, 2463 |
| MspR9I | CCNGG | 7 cut(s) | 335, 672, 709, 1821, 1977, 2463, 2471 |
| MunI | CAATTG | 2 cut(s) | 753, 1908 |
| Mva1269I | GAATGC | 2 cut(s) | 829, 1307 |
| MvaI | CCWGG | 5 cut(s) | 672, 709, 1821, 1977, 2471 |
| MvnI | CGCG | 1 cut(s) | 1708 |
| NciI | CCSGG | 2 cut(s) | 335, 2463 |
| NcoI | CCATGG | 3 cut(s) | 237, 350, 2166 |
| NdeI | CATATG | 1 cut(s) | 2290 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 745, 2467 |
| NmeAIII | GCCGAG | 1 cut(s) | 322 |
| NmuCI | GTSAC | 2 cut(s) | 434, 1403 |
| NsiI | ATGCAT | 3 cut(s) | 1019, 1183, 2287 |
| NspI | RCATGY | 4 cut(s) | 1091, 2129, 2203, 2269 |
| NspV | TTCGAA | 1 cut(s) | 257 |
| PagI | TCATGA | 1 cut(s) | 2017 |
| PciI | ACATGT | 1 cut(s) | 2125 |
| PctI | GAATGC | 2 cut(s) | 829, 1307 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1938, 2127 |
| PfeI | GAWTC | 5 cut(s) | 814, 866, 919, 1274, 2389 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1694 |
| PkrI | GCNGC | 9 cut(s) | 295, 1738, 1958, 1961, 2194, 2275, 2278, 2401, 2416 |
| PleI | GAGTC | 1 cut(s) | 460 |
| PmaCI | CACGTG | 1 cut(s) | 423 |
| PmlI | CACGTG | 1 cut(s) | 423 |
| PpsI | GAGTC | 1 cut(s) | 460 |
| Ppu21I | YACGTR | 1 cut(s) | 423 |
| PscI | ACATGT | 1 cut(s) | 2125 |
| Psp6I | CCWGG | 5 cut(s) | 670, 707, 1819, 1975, 2469 |
| PspCI | CACGTG | 1 cut(s) | 423 |
| PspGI | CCWGG | 5 cut(s) | 670, 707, 1819, 1975, 2469 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 745, 2467 |
| PspPI | GGNCC | 3 cut(s) | 1123, 1229, 1805 |
| PstI | CTGCAG | 2 cut(s) | 2197, 2404 |
| PstNI | CAGNNNCTG | 1 cut(s) | 568 |
| PsuI | RGATCY | 4 cut(s) | 887, 1864, 2320, 2465 |
| PvuII | CAGCTG | 2 cut(s) | 925, 1893 |
| RsaI | GTAC | 4 cut(s) | 561, 1092, 1715, 2175 |
| RsaNI | GTAC | 4 cut(s) | 560, 1091, 1714, 2174 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1041, 1584, 2165 |
| SacII | CCGCGG | 1 cut(s) | 1709 |
| SalI | GTCGAC | 1 cut(s) | 1566 |
| SaqAI | TTAA | 5 cut(s) | 678, 1368, 1968, 2153, 2180 |
| SatI | GCNGC | 9 cut(s) | 294, 1737, 1957, 1960, 2193, 2274, 2277, 2400, 2415 |
| Sau96I | GGNCC | 3 cut(s) | 1123, 1229, 1805 |
| SchI | GAGTC | 1 cut(s) | 461 |
| ScrFI | CCNGG | 7 cut(s) | 335, 672, 709, 1821, 1977, 2463, 2471 |
| SduI | GDGCHC | 3 cut(s) | 303, 396, 2034 |
| SexAI | ACCWGGT | 1 cut(s) | 1975 |
| SfcI | CTRYAG | 2 cut(s) | 2193, 2400 |
| Sfr303I | CCGCGG | 1 cut(s) | 1709 |
| SfuI | TTCGAA | 1 cut(s) | 257 |
| SgrBI | CCGCGG | 1 cut(s) | 1709 |
| SinI | GGWCC | 1 cut(s) | 1229 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1041, 1584, 2165 |
| SsiI | CCGC | 7 cut(s) | 1094, 1706, 1708, 1956, 1959, 2135, 2274 |
| SspI | AATATT | 1 cut(s) | 1938 |
| SspMI | CTAG | 6 cut(s) | 906, 1145, 1323, 1898, 1989, 2250 |
| StyD4I | CCNGG | 7 cut(s) | 333, 670, 707, 1819, 1975, 2461, 2469 |
| StyI | CCWWGG | 4 cut(s) | 225, 237, 350, 2166 |
| TaaI | ACNGT | 5 cut(s) | 598, 762, 1403, 2209, 2308 |
| TaiI | ACGT | 2 cut(s) | 425, 441 |
| TaqI | TCGA | 7 cut(s) | 208, 257, 379, 450, 1518, 1567, 1780 |
| TatI | WGTACW | 2 cut(s) | 559, 1713 |
| TauI | GCSGC | 3 cut(s) | 1959, 1962, 2276 |
| TfiI | GAWTC | 5 cut(s) | 814, 866, 919, 1274, 2389 |
| Tru1I | TTAA | 5 cut(s) | 678, 1368, 1968, 2153, 2180 |
| Tru9I | TTAA | 5 cut(s) | 678, 1368, 1968, 2153, 2180 |
| TscAI | CASTG | 3 cut(s) | 597, 2212, 2449 |
| TseFI | GTSAC | 2 cut(s) | 434, 1403 |
| TseI | GCWGC | 6 cut(s) | 293, 1736, 2192, 2276, 2399, 2414 |
| Tsp45I | GTSAC | 2 cut(s) | 434, 1403 |
| TspDTI | ATGAA | 7 cut(s) | 121, 480, 996, 1449, 1674, 1887, 1947 |
| TspGWI | ACGGA | 1 cut(s) | 1804 |
| TspRI | CASTG | 3 cut(s) | 597, 2212, 2449 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1694 |
| VpaK11BI | GGWCC | 1 cut(s) | 1229 |
| XapI | RAATTY | 6 cut(s) | 964, 1032, 1436, 1490, 1647, 1874 |
| XceI | RCATGY | 4 cut(s) | 1091, 2129, 2203, 2269 |
| XmiI | GTMKAC | 3 cut(s) | 546, 1140, 1567 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1938, 2127 |
| XspI | CTAG | 6 cut(s) | 906, 1145, 1323, 1898, 1989, 2250 |
| Zsp2I | ATGCAT | 3 cut(s) | 1019, 1183, 2287 |