Rmu_sc0001788.1_g000005

Spermatogenesis-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001788.1
OG0012290
Physical Location & Seq
Reverse (-)
26443 .. 33539
7097 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001788.1_g000005.1.cds

Sequence Viewer

Length: 2853 bp
atggtgtcggcttgttgggacttcgatggcggccttttgttcgtcggcgatggctatcgcagtttggcagtctcctccattgcaggtcatagggccgcgtccgacggtgctgctgtccagattgctggcactaggatccagatttgggatctaggtgggcttggaaaatggagctggatctgggatccgggtggagtttggttttggcctgtgacccacaatctttgttgggctttttatgatttgctagaatggattagggctcctgtgctttactggggctgctatatcctgattcctgagaacatagatgtaagatcaaggctgggccacctgttagttaacacagtcaagtccactccaactgtcaaacaagcccagcttccacatggctctcttcacctcttcacctcttcaccacttccctacacatggcaccaccaacttcctccattccagctttctcagcgcttcatcttttcacacccaacaaaactactctcctcacccagaaaagcacaccctcttcctcactctttgatttctcatcgacccttttacgcttccaaggttttagccatggctcaccaacacacttcgaacccaacttcccacaagcacaccaatcgcctcgctgccgagcacagtccctatctccttcaacacgcccacaacccggttgattggtatccatggagtgaagaggctttcgccgaagctcgaaagagagatgtgcccatcttcttatcaattgggtacagcacatgccattggtgtcacgttatggaggtcgagtcttttgaggatgaaggcattgccaagttgctgaatgagtggtttgttagtatcaaggtggatcgggaggaaagaccagatgtggataaggtatacatgacctatgtacaggctctgtatggtggtggaggctggccactgacggtgttcctttcaccagatttgaaacctttgatgggtggaacttactttcccccagaggacaagtatggaagaccaggatttaagactatacttggaaaagtgaaagaagcctgggagaccaagagggatgtgcttgtcaagagtggagcctttgcaattgaacagttgtcagaagcattgtcaacaagtgcaggttctaaaaaattgtcagatgggatcccaaagaatgctttgcgtctatgtgctgagcaactttctcaaagttttgattcaaagtttggtgggtttggatctgccccaaagtttcctagaccagttgagattcagctgatgctttattactcaaagaagtcggaggaaactgtaaattctggcaaggccaatgaagttctgaaaaaggttctgtttaccttgcaatgcatggcaaaagggggaattcacgatcacgtcggaggtggcttccaccgatatagcgtggatgagtgctggcatgtaccgcactttgagaagatgttgtatgatcagggccaacttgctaatgtctacctagatgccttttctattgccaaagatgtattctatgcatctattgctcgggatgttcttgattatctgaggagagacatgattggaccagatggcgaaatatattcagcagaagatgctgacagtgctgaatctgaaggtgcatccagaaaaaaggaaggagcattctatgtttggtctagcaaagaggttgaagacatacttggagaagatgcaactctttttaagaaccactactatataaagccttccggtaactgtgacctttccagaataagtgatcctcataatgaattcaagaggaagaatgtgctgattgagagaaaaagtcattccgaggcatcaaaatttgccatgccggttgagaaatacctcgacattctgggtcagagcaggcgaaagctttttgaaataagatgtagtcgaccaagaccacatttggatgataaggtaattgtagcatggaatggactggccatctcagcctttgcaagagcctctaaaattctaaagaatgaacctaaggagatcaagttcaactttcctgttgttggttgtgatccgcgggagtacattgaagttgcagaaaaggcagcatcttttatcaggcgacacctttacaatgaacaatctcatcgactgcaacgcagctttaggaacggcccatctaaagcacctggatttttagatgattatgcttttcttatttcagggttattggatctttatgaatttggtggccaaaccagctggctagtttgggcaattgaactgcaagacacgcaggatgaaatatttcttgataaagagggaggcggctattttaataccccaggtgatgaccctagtgttctccttcgtgtgaaggaagatcatgatggggcagagccctctggaaattcggtttctgtgatcaaccttgtgagattggcatcaatactatctggcaacaggtctgagcattacagacaggaagctgaacatgttctggctgttttcgagacaagattaaacgacatggccatggcagtacctttaatgtgttgtgctgcagacatgctcactgttccttctcggaagcaagttgtcttggttggccagaaaactagagagtttgaaaacatgcttgccgcagctcatgcatcatatgataccaacaaaacggttattcacatagatccaactaattcggaagagttgcaattctgggaagacaaaaacagcgacattgcgctcatggcaaagaatcatgttgctgcagacaaagtggtcgctctcgtctgccaaaactttacttgcagtgcgcctgtcgctgaccctggatccctggaggctctgctctccaagaaatcagtcccttcagcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00240 ko01100 map00240 map01100
Pfam Domains
Protein Families
Thioredox_DsbH

Protein Analysis

950

Amino Acids

106.76

Weight (kDa)

6.34

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012290)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03200 AT4G03200
fragaria_vesca FvH4_2g25030
malus_domestica MD03G1280600.v1.1
prunus_persica Prupe.8G255100_v2.0.a1
pyrus_communis pycom03g22230
rosa_chinensis RchiOBHm_Chr6g0293001
rosa_laevigata RLG00000011975
rosa_multiflora Rmu_sc0001788.1_g000005 Rmu_sc0003615.1_g000002 Rmu_sc0028741.1_g000001
rosa_roxburghii Rroxscaffold_7G00174480
rosa_rugosa Rorug06G0231900 Rorug06G0232000
rosa_samantha Rh6AG344700 Rh6BG352100 Rh6CG359300 Rh6DG344800
rosa_wichuraiana Rw6G030080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2753
Acc36I ACCTGC 2 cut(s) 74, 1121
AccB1I GGYRCC 1 cut(s) 435
AccI GTMKAC 3 cut(s) 888, 1482, 1909
AccII CGCG 2 cut(s) 98, 2050
AciI CCGC 7 cut(s) 30, 96, 1436, 2048, 2050, 2301, 2616
AcoI YGGCCR 5 cut(s) 929, 1959, 2224, 2505, 2581
AcsI RAATTY 7 cut(s) 1306, 1374, 1778, 1832, 1989, 2216, 2383
AcuI CTGAAG 2 cut(s) 1641, 2829
AfaI GTAC 5 cut(s) 758, 903, 1434, 2057, 2517
AfeI AGCGCT 1 cut(s) 470
AfiI CCNNNNNNNGG 5 cut(s) 145, 432, 676, 971, 2036
AflIII ACRYGT 1 cut(s) 2467
AjiI CACGTC 1 cut(s) 1387
AjnI CCWGG 6 cut(s) 1012, 1049, 2161, 2317, 2803, 2811
AjuI GAANNNNNNNTTGG 4 cut(s) 1499, 1531, 1671, 1703
AloI GAACNNNNNNTCC 6 cut(s) 593, 625, 970, 1002, 2003, 2035
Alw21I GWGCWC 1 cut(s) 645
Alw26I GTCTC 4 cut(s) 76, 1049, 1554, 2480
AlwNI CAGNNNCTG 1 cut(s) 910
Ama87I CYCGRG 1 cut(s) 1533
Aor51HI AGCGCT 1 cut(s) 470
ApeKI GCWGC 8 cut(s) 110, 282, 635, 2078, 2133, 2534, 2618, 2741
ApoI RAATTY 7 cut(s) 1306, 1374, 1778, 1832, 1989, 2216, 2383
Asp700I GAANNNNTTC 2 cut(s) 2280, 2469
AspLEI GCGC 3 cut(s) 471, 2719, 2791
AspS9I GGNCC 5 cut(s) 93, 328, 1465, 1571, 2147
AsuC2I CCSGG 2 cut(s) 189, 677
AsuHPI GGTGA 7 cut(s) 392, 400, 408, 498, 578, 942, 2333
AsuII TTCGAA 1 cut(s) 599
AvaI CYCGRG 1 cut(s) 1533
AvaII GGWCC 1 cut(s) 1571
AxyI CCTNAGG 1 cut(s) 2007
BaeGI GKGCMC 1 cut(s) 738
BalI TGGCCA 5 cut(s) 931, 1961, 2226, 2507, 2583
BamHI GGATCC 4 cut(s) 135, 184, 1155, 2807
BanI GGYRCC 1 cut(s) 435
BanII GRGCYC 2 cut(s) 265, 2376
BbsI GAAGAC 3 cut(s) 1015, 1686, 2703
Bbv12I GWGCWC 1 cut(s) 645
BbvI GCAGC 8 cut(s) 97, 269, 622, 2090, 2145, 2521, 2630, 2728
BccI CCATC 9 cut(s) 20, 44, 746, 964, 1145, 1571, 1970, 2158, 2357
BceAI ACGGC 1 cut(s) 2161
BcgI CGANNNNNNTGC 4 cut(s) 92, 126, 608, 642
BciT130I CCWGG 6 cut(s) 1014, 1051, 2163, 2319, 2805, 2813
BciVI GTATCC 1 cut(s) 699
BclI TGATCA 2 cut(s) 1459, 2397
BcnI CCSGG 2 cut(s) 189, 677
BcoDI GTCTC 4 cut(s) 76, 1049, 1554, 2480
BfaI CTAG 9 cut(s) 132, 152, 248, 1248, 1487, 1665, 2240, 2331, 2592
BfmI CTRYAG 2 cut(s) 2535, 2742
BfoI RGCGCY 1 cut(s) 472
BfuAI ACCTGC 2 cut(s) 74, 1121
BfuI GTATCC 1 cut(s) 699
BlpI GCTNAGC 1 cut(s) 1185
Bme1390I CCNGG 8 cut(s) 189, 677, 1014, 1051, 2163, 2319, 2805, 2813
Bme18I GGWCC 1 cut(s) 1571
BmeT110I CYCGRG 1 cut(s) 1533
BmgBI CACGTC 1 cut(s) 1387
BmgT120I GGNCC 5 cut(s) 93, 328, 1465, 1571, 2147
BmiI GGNNCC 7 cut(s) 137, 186, 264, 437, 1087, 1157, 2809
BmrFI CCNGG 8 cut(s) 189, 677, 1014, 1051, 2163, 2319, 2805, 2813
BmrI ACTGGG 1 cut(s) 286
BmuI ACTGGG 1 cut(s) 286
BpiI GAAGAC 3 cut(s) 1015, 1686, 2703
BpmI CTGGAG 1 cut(s) 2834
Bpu1102I GCTNAGC 1 cut(s) 1185
Bpu14I TTCGAA 1 cut(s) 599
BpuMI CCSGG 2 cut(s) 189, 677
BsaBI GATNNNNATC 3 cut(s) 54, 687, 2416
BsaI GGTCTC 1 cut(s) 1049
BsaWI WCCGGW 1 cut(s) 1736
BsaXI ACNNNNNCTCC 4 cut(s) 779, 809, 2003, 2033
Bsc4I CCNNNNNNNGG 5 cut(s) 145, 432, 676, 971, 2036
Bse118I RCCGGY 1 cut(s) 1843
Bse1I ACTGG 3 cut(s) 281, 1253, 1962
Bse21I CCTNAGG 1 cut(s) 2007
Bse3DI GCAATG 4 cut(s) 78, 813, 1361, 2712
Bse8I GATNNNNATC 3 cut(s) 54, 687, 2416
BseBI CCWGG 6 cut(s) 1014, 1051, 2163, 2319, 2805, 2813
BseGI GGATG 7 cut(s) 811, 1072, 1423, 1543, 1628, 1933, 2278
BseJI GATNNNNATC 3 cut(s) 54, 687, 2416
BseLI CCNNNNNNNGG 5 cut(s) 145, 432, 676, 971, 2036
BseMI GCAATG 4 cut(s) 78, 813, 1361, 2712
BseMII CTCAG 6 cut(s) 291, 479, 1176, 1544, 1980, 2433
BseNI ACTGG 3 cut(s) 281, 1253, 1962
BseRI GAGGAG 3 cut(s) 64, 493, 1570
BseSI GKGCMC 1 cut(s) 738
BseXI GCAGC 8 cut(s) 97, 269, 622, 2090, 2145, 2521, 2630, 2728
BseYI CCCAGC 2 cut(s) 325, 378
BsgI GTGCAG 1 cut(s) 1149
Bsh1236I CGCG 2 cut(s) 98, 2050
BshNI GGYRCC 1 cut(s) 435
BsiHKAI GWGCWC 1 cut(s) 645
BsiHKCI CYCGRG 1 cut(s) 1533
BsiSI CCGG 4 cut(s) 188, 677, 1737, 1844
BslFI GGGAC 3 cut(s) 32, 633, 2825
BslI CCNNNNNNNGG 5 cut(s) 145, 432, 676, 971, 2036
BsmAI GTCTC 4 cut(s) 76, 1049, 1554, 2480
BsmFI GGGAC 3 cut(s) 32, 633, 2825
BsmI GAATGC 2 cut(s) 1171, 1649
Bso31I GGTCTC 1 cut(s) 1049
BsoBI CYCGRG 1 cut(s) 1533
Bsp119I TTCGAA 1 cut(s) 599
Bsp1286I GDGCHC 4 cut(s) 265, 645, 738, 2376
Bsp1407I TGTACA 1 cut(s) 901
Bsp1720I GCTNAGC 1 cut(s) 1185
Bsp19I CCATGG 3 cut(s) 579, 692, 2508
BspACI CCGC 7 cut(s) 30, 96, 1436, 2048, 2050, 2301, 2616
BspCNI CTCAG 6 cut(s) 292, 478, 1177, 1545, 1979, 2434
BspFNI CGCG 2 cut(s) 98, 2050
BspHI TCATGA 1 cut(s) 2359
BspLI GGNNCC 7 cut(s) 137, 186, 264, 437, 1087, 1157, 2809
BspMAI CTGCAG 2 cut(s) 2539, 2746
BspMI ACCTGC 2 cut(s) 74, 1121
BspT104I TTCGAA 1 cut(s) 599
BspT107I GGYRCC 1 cut(s) 435
BspTNI GGTCTC 1 cut(s) 1049
BsrDI GCAATG 4 cut(s) 78, 813, 1361, 2712
BsrFI RCCGGY 1 cut(s) 1843
BsrGI TGTACA 1 cut(s) 901
BsrI ACTGG 3 cut(s) 281, 1253, 1962
BssAI RCCGGY 1 cut(s) 1843
BssNAI GTATAC 1 cut(s) 889
BssT1I CCWWGG 4 cut(s) 567, 579, 692, 2508
Bst1107I GTATAC 1 cut(s) 889
Bst2UI CCWGG 6 cut(s) 1014, 1051, 2163, 2319, 2805, 2813
Bst6I CTCTTC 6 cut(s) 402, 410, 418, 531, 696, 2673
BstAPI GCANNNNNTGC 3 cut(s) 1529, 1601, 2624
BstAUI TGTACA 1 cut(s) 901
BstBI TTCGAA 1 cut(s) 599
BstC8I GCNNGC 6 cut(s) 127, 929, 1427, 1880, 2237, 2613
BstDEI CTNAG 7 cut(s) 300, 465, 1185, 1553, 1966, 2007, 2442
BstDSI CCRYGG 4 cut(s) 579, 692, 2048, 2508
BstF5I GGATG 7 cut(s) 811, 1072, 1423, 1543, 1628, 1933, 2278
BstFNI CGCG 2 cut(s) 98, 2050
BstH2I RGCGCY 1 cut(s) 472
BstHHI GCGC 3 cut(s) 471, 2719, 2791
BstMAI GTCTC 4 cut(s) 76, 1049, 1554, 2480
BstNI CCWGG 6 cut(s) 1014, 1051, 2163, 2319, 2805, 2813
BstNSI RCATGY 5 cut(s) 768, 1433, 2471, 2545, 2611
BstSCI CCNGG 8 cut(s) 187, 675, 1012, 1049, 2161, 2317, 2803, 2811
BstSFI CTRYAG 2 cut(s) 2535, 2742
BstSLI GKGCMC 1 cut(s) 738
BstUI CGCG 2 cut(s) 98, 2050
BstV1I GCAGC 8 cut(s) 97, 269, 622, 2090, 2145, 2521, 2630, 2728
BstV2I GAAGAC 3 cut(s) 1015, 1686, 2703
BstX2I RGATCY 9 cut(s) 135, 148, 177, 184, 1155, 1229, 2206, 2662, 2807
BstXI CCANNNNNNTGG 1 cut(s) 125
BstYI RGATCY 9 cut(s) 135, 148, 177, 184, 1155, 1229, 2206, 2662, 2807
BstZ17I GTATAC 1 cut(s) 889
Bsu36I CCTNAGG 1 cut(s) 2007
BsuI GTATCC 1 cut(s) 699
BtgI CCRYGG 4 cut(s) 579, 692, 2048, 2508
BtgZI GCGATG 1 cut(s) 63
BtrI CACGTC 1 cut(s) 1387
BtsCI GGATG 7 cut(s) 811, 1072, 1423, 1543, 1628, 1933, 2278
BtsI GCAGTG 1 cut(s) 2791
BtsIMutI CAGTG 4 cut(s) 932, 1615, 2547, 2791
BveI ACCTGC 2 cut(s) 74, 1121
Cac8I GCNNGC 6 cut(s) 127, 929, 1427, 1880, 2237, 2613
CaiI CAGNNNCTG 1 cut(s) 910
CciI TCATGA 1 cut(s) 2359
CfoI GCGC 3 cut(s) 471, 2719, 2791
Cfr10I RCCGGY 1 cut(s) 1843
Cfr13I GGNCC 5 cut(s) 93, 328, 1465, 1571, 2147
Cfr42I CCGCGG 1 cut(s) 2051
CseI GACGC 2 cut(s) 87, 1163
Csp6I GTAC 5 cut(s) 757, 902, 1433, 2056, 2516
CspCI CAANNNNNGTGG 2 cut(s) 206, 241
CviQI GTAC 5 cut(s) 757, 902, 1433, 2056, 2516
DdeI CTNAG 7 cut(s) 300, 465, 1185, 1553, 1966, 2007, 2442
DrdI GACNNNNNNGTC 1 cut(s) 2753
DseDI GACNNNNNNGTC 1 cut(s) 2753
EaeI YGGCCR 5 cut(s) 929, 1959, 2224, 2505, 2581
Eam1104I CTCTTC 6 cut(s) 402, 410, 418, 531, 696, 2673
EarI CTCTTC 6 cut(s) 402, 410, 418, 531, 696, 2673
Eco130I CCWWGG 4 cut(s) 567, 579, 692, 2508
Eco24I GRGCYC 2 cut(s) 265, 2376
Eco31I GGTCTC 1 cut(s) 1049
Eco47I GGWCC 1 cut(s) 1571
Eco47III AGCGCT 1 cut(s) 470
Eco57I CTGAAG 2 cut(s) 1641, 2829
Eco81I CCTNAGG 1 cut(s) 2007
Eco88I CYCGRG 1 cut(s) 1533
EcoRI GAATTC 2 cut(s) 1374, 1778
EcoRII CCWGG 6 cut(s) 1012, 1049, 2161, 2317, 2803, 2811
EcoT14I CCWWGG 4 cut(s) 567, 579, 692, 2508
EcoT22I ATGCAT 3 cut(s) 1361, 1525, 2629
EcoT38I GRGCYC 2 cut(s) 265, 2376
ErhI CCWWGG 4 cut(s) 567, 579, 692, 2508
FalI AAGNNNNNCTT 6 cut(s) 366, 398, 1671, 1703, 2009, 2041
FaqI GGGAC 3 cut(s) 32, 633, 2825
FauI CCCGC 1 cut(s) 2043
FauNDI CATATG 1 cut(s) 2632
FbaI TGATCA 2 cut(s) 1459, 2397
FblI GTMKAC 3 cut(s) 888, 1482, 1909
FokI GGATG 7 cut(s) 818, 1079, 1430, 1550, 1615, 1940, 2285
FriOI GRGCYC 2 cut(s) 265, 2376
FspBI CTAG 9 cut(s) 132, 152, 248, 1248, 1487, 1665, 2240, 2331, 2592
GlaI GCGC 3 cut(s) 470, 2718, 2790
GsaI CCCAGC 2 cut(s) 329, 382
GsuI CTGGAG 1 cut(s) 2834
HaeII RGCGCY 1 cut(s) 472
HapII CCGG 4 cut(s) 188, 677, 1737, 1844
HgaI GACGC 2 cut(s) 87, 1163
HhaI GCGC 3 cut(s) 471, 2719, 2791
Hin6I GCGC 3 cut(s) 469, 2717, 2789
HinP1I GCGC 3 cut(s) 469, 2717, 2789
HincII GTYRAC 3 cut(s) 343, 1122, 1910
HindII GTYRAC 3 cut(s) 343, 1122, 1910
HindIII AAGCTT 1 cut(s) 1886
HinfI GANTC 6 cut(s) 295, 794, 1208, 1261, 1616, 2731
HpaI GTTAAC 1 cut(s) 343
HpaII CCGG 4 cut(s) 188, 677, 1737, 1844
HphI GGTGA 7 cut(s) 392, 400, 408, 498, 578, 942, 2333
Hpy166II GTNNAC 7 cut(s) 343, 357, 889, 1122, 1347, 1483, 1910
Hpy8I GTNNAC 7 cut(s) 343, 357, 889, 1122, 1347, 1483, 1910
Hpy99I CGWCG 3 cut(s) 47, 107, 1391
HpyAV CCTTC 9 cut(s) 668, 803, 1616, 1637, 1743, 2344, 2351, 2565, 2853
HpyCH4IV ACGT 2 cut(s) 780, 1386
HpyF3I CTNAG 7 cut(s) 300, 465, 1185, 1553, 1966, 2007, 2442
HpySE526I ACGT 2 cut(s) 780, 1386
HspAI GCGC 3 cut(s) 469, 2717, 2789
Ksp22I TGATCA 2 cut(s) 1459, 2397
KspAI GTTAAC 1 cut(s) 343
KspI CCGCGG 1 cut(s) 2051
LmnI GCTCC 4 cut(s) 171, 268, 1085, 1646
Lsp1109I GCAGC 8 cut(s) 97, 269, 622, 2090, 2145, 2521, 2630, 2728
MaeI CTAG 9 cut(s) 132, 152, 248, 1248, 1487, 1665, 2240, 2331, 2592
MaeII ACGT 2 cut(s) 780, 1386
MaeIII GTNAC 4 cut(s) 211, 776, 1739, 1745
MfeI CAATTG 3 cut(s) 750, 1095, 2250
MflI RGATCY 9 cut(s) 135, 148, 177, 184, 1155, 1229, 2206, 2662, 2807
MhlI GDGCHC 4 cut(s) 265, 645, 738, 2376
MlsI TGGCCA 5 cut(s) 931, 1961, 2226, 2507, 2583
MluNI TGGCCA 5 cut(s) 931, 1961, 2226, 2507, 2583
MlyI GAGTC 1 cut(s) 803
MmeI TCCRAC 5 cut(s) 126, 386, 1272, 1369, 2690
Mox20I TGGCCA 5 cut(s) 931, 1961, 2226, 2507, 2583
Mph1103I ATGCAT 3 cut(s) 1361, 1525, 2629
MroXI GAANNNNTTC 2 cut(s) 2280, 2469
MscI TGGCCA 5 cut(s) 931, 1961, 2226, 2507, 2583
MseI TTAA 6 cut(s) 342, 1020, 1710, 2310, 2495, 2522
MslI CAYNNNNRTG 2 cut(s) 1926, 2507
Msp20I TGGCCA 5 cut(s) 931, 1961, 2226, 2507, 2583
MspA1I CMGCKG 3 cut(s) 1267, 2050, 2235
MspI CCGG 4 cut(s) 188, 677, 1737, 1844
MspR9I CCNGG 8 cut(s) 189, 677, 1014, 1051, 2163, 2319, 2805, 2813
MunI CAATTG 3 cut(s) 750, 1095, 2250
Mva1269I GAATGC 2 cut(s) 1171, 1649
MvaI CCWGG 6 cut(s) 1014, 1051, 2163, 2319, 2805, 2813
MvnI CGCG 2 cut(s) 98, 2050
NciI CCSGG 2 cut(s) 189, 677
NcoI CCATGG 3 cut(s) 579, 692, 2508
NdeI CATATG 1 cut(s) 2632
NlaIV GGNNCC 7 cut(s) 137, 186, 264, 437, 1087, 1157, 2809
NmeAIII GCCGAG 1 cut(s) 664
NmuCI GTSAC 3 cut(s) 211, 776, 1745
NsiI ATGCAT 3 cut(s) 1361, 1525, 2629
NspI RCATGY 5 cut(s) 768, 1433, 2471, 2545, 2611
NspV TTCGAA 1 cut(s) 599
PagI TCATGA 1 cut(s) 2359
PciI ACATGT 1 cut(s) 2467
PctI GAATGC 2 cut(s) 1171, 1649
PdmI GAANNNNTTC 2 cut(s) 2280, 2469
PfeI GAWTC 5 cut(s) 295, 1208, 1261, 1616, 2731
PleI GAGTC 1 cut(s) 802
PpsI GAGTC 1 cut(s) 802
PscI ACATGT 1 cut(s) 2467
Psp6I CCWGG 6 cut(s) 1012, 1049, 2161, 2317, 2803, 2811
PspFI CCCAGC 2 cut(s) 325, 378
PspGI CCWGG 6 cut(s) 1012, 1049, 2161, 2317, 2803, 2811
PspN4I GGNNCC 7 cut(s) 137, 186, 264, 437, 1087, 1157, 2809
PspPI GGNCC 5 cut(s) 93, 328, 1465, 1571, 2147
PstI CTGCAG 2 cut(s) 2539, 2746
PstNI CAGNNNCTG 1 cut(s) 910
PsuI RGATCY 9 cut(s) 135, 148, 177, 184, 1155, 1229, 2206, 2662, 2807
PvuII CAGCTG 2 cut(s) 1267, 2235
RsaI GTAC 5 cut(s) 758, 903, 1434, 2057, 2517
RsaNI GTAC 5 cut(s) 757, 902, 1433, 2056, 2516
RseI CAYNNNNRTG 2 cut(s) 1926, 2507
SacII CCGCGG 1 cut(s) 2051
SalI GTCGAC 1 cut(s) 1908
SaqAI TTAA 6 cut(s) 342, 1020, 1710, 2310, 2495, 2522
Sau96I GGNCC 5 cut(s) 93, 328, 1465, 1571, 2147
SchI GAGTC 1 cut(s) 803
ScrFI CCNGG 8 cut(s) 189, 677, 1014, 1051, 2163, 2319, 2805, 2813
SduI GDGCHC 4 cut(s) 265, 645, 738, 2376
SfcI CTRYAG 2 cut(s) 2535, 2742
Sfr303I CCGCGG 1 cut(s) 2051
SfuI TTCGAA 1 cut(s) 599
SgrBI CCGCGG 1 cut(s) 2051
SinI GGWCC 1 cut(s) 1571
SmiMI CAYNNNNRTG 2 cut(s) 1926, 2507
SsiI CCGC 7 cut(s) 30, 96, 1436, 2048, 2050, 2301, 2616
SspI AATATT 1 cut(s) 2280
SspMI CTAG 9 cut(s) 132, 152, 248, 1248, 1487, 1665, 2240, 2331, 2592
StyD4I CCNGG 8 cut(s) 187, 675, 1012, 1049, 2161, 2317, 2803, 2811
StyI CCWWGG 4 cut(s) 567, 579, 692, 2508
TaiI ACGT 2 cut(s) 783, 1389
TaqI TCGA 9 cut(s) 24, 550, 599, 721, 792, 1860, 1909, 2122, 2484
TatI WGTACW 2 cut(s) 901, 2055
TauI GCSGC 4 cut(s) 33, 98, 2304, 2618
TfiI GAWTC 5 cut(s) 295, 1208, 1261, 1616, 2731
Tru1I TTAA 6 cut(s) 342, 1020, 1710, 2310, 2495, 2522
Tru9I TTAA 6 cut(s) 342, 1020, 1710, 2310, 2495, 2522
TscAI CASTG 4 cut(s) 939, 1615, 2554, 2791
TseFI GTSAC 3 cut(s) 211, 776, 1745
TseI GCWGC 8 cut(s) 110, 282, 635, 2078, 2133, 2534, 2618, 2741
Tsp45I GTSAC 3 cut(s) 211, 776, 1745
TspDTI ATGAA 8 cut(s) 463, 822, 1338, 1791, 2016, 2124, 2229, 2289
TspRI CASTG 4 cut(s) 939, 1615, 2554, 2791
VpaK11BI GGWCC 1 cut(s) 1571
XapI RAATTY 7 cut(s) 1306, 1374, 1778, 1832, 1989, 2216, 2383
XceI RCATGY 5 cut(s) 768, 1433, 2471, 2545, 2611
XcmI CCANNNNNNNNNTGG 1 cut(s) 386
XmiI GTMKAC 3 cut(s) 888, 1482, 1909
XmnI GAANNNNTTC 2 cut(s) 2280, 2469
XspI CTAG 9 cut(s) 132, 152, 248, 1248, 1487, 1665, 2240, 2331, 2592
Zsp2I ATGCAT 3 cut(s) 1361, 1525, 2629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.