Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005321

Physical Location & Seq

Genomic Coordinates Forward (+)

58536981 .. 58544519

Gene Structure 7539 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26644

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGCTTCCGCCGAGCCTAATCTCCAGAGAAACCTCCACCTCCTCTCCGCCGAACAGGTGGAGCTGGCGAAGGTGCTGGTGGAGATGGGGCAGGCTCATCTGTTCGAGCATTGGGCCGAGCCGGCCGTCGAGGATGACGAAAAGAAAGCCTTTTTTGATCAGGTGATTCGGCTCAATTCAAGCTATCCAGGGGGTTTGGCATCATATATCAAAACTGCTAGAGAACTGTTAGCGGATTCAAAAGCCGGAAAGAATCCATTTGATGGCTTTACACCTTCCGTTCCAACAGGTGAAACCTTGAATTTTGGTGATGATAGCTTTATGAGTTTTGAGGAGACTGGTGTCAAAGAAGTTCGGAAAGCTGCATTTGTTCTCGTTGCTGGAGGACTTGGGGAACGTCTGGGATACAACGGAATTAAGGTTGCTCTTCCCAGAGAGACGACCACAGGAGCGTGTTTTTTACAACATTATATCGAGACAATATTGGCTCTTCAAGACGCTAGCTGTAAACTTGCAGAAGGTGAATGCCAAACAAAAATTCCTCTGGTTATAATGACATCAGATGACACACATTCTCATACAGTAGAGCTTTTAAAGTCAAATTCTTATTTTGGAATGGAACCTAATCAAGTAAAGCTTTTAAAGCAGGAAAAAGTTGCATGCTTAGATGATAATGATGCAAGGCTTGCAGTAGACCCACGTAACAAGTACAGGATTCAGACCAAACCTCATGGACACGGTGATGTGCATTCACTACTCTACTCTAGTGGCCTCCTCACTGAATGGCGTGACACTGGTTTGAGATGGGTTCTGTTCTTCCAAGATACAAATGGACTTCTGTTCAATGGAATTCCAGCATCATTGGGTGTTAGTGCTACAAGACAGTACCATGTTAACTCCCTAGCTGTTCCACGCAAAGCAAAAGAAGCAATTGGAGGAATTACCCGACTTACTCATGCTGATGGGAGATCAATGGTGATCAATGTGGAGTACAACCAGCTTGATCCACTGCTTAGAGCAACTGGATTTCCTGACGGTGATGTCAACTGTGAGACTGGCTATTCTCCTTTCCCTGGGAATATCAACCAATTAATCTTGGAACTTGGTCCGTACATTGAGGAGCTCACAAAAACAGGAGGTGCCATACAGGAGTTTGTTAACCCAAAATACAAAGATGCTAGTAAGACTTCATTTAAGTCCTCAACTCGGTTGGAGTGTATGATGCAAGACTATCCAAAAACTCTACCTCCATCTGCTAGGGTGGGATTCACGGTAATGGAGCCATGGCTTGCTTATGCACCTGTTAAGAACAACCCTGAGGATGCTGCTAAGGTACCAAAGGGAAATCCATATCATAGTGCAACTTCTGGAGAAATGTTGGTTTATCGTGCAAACAGTCTCATTCTCAGAAAGGCTGGAGTCCAAGTAGCTGATCCAGTACAACAGGTTTTCAACGGTCAAGAAATTGAAGTGTGGCCTCGTGTCACATGGAAACCAAAATGGGCGGTCACTTTTAAGGAAGTAAAAAATAAAGTCAGTGGAAGTAGCTCAATTTCTCAGAGGTCTACATTGGTTATTAAGGGCCGTAATATATTTGTCAAGGATCTCTGCTTGGATGGGGCACTTGTTATCGATGTTGCTGATGATAAAGAGGTAAAAGTGGAAGGTTCGGTACAGAATAAAGGCTGGATCCTTGAAAATGTCGATTACAATGATACTTCAGTACCTGAGGAACTGAGGATAAGGGGTTTCAGAATCAACAAGATTGAACAATTGGTAAAGTCTGAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003983 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006011 GO:0006082 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009555 GO:0009987 GO:0010035 GO:0010038 GO:0010491 GO:0016740 GO:0016772 GO:0016779 GO:0017103 GO:0018130 GO:0019438 GO:0019752 GO:0032501 GO:0032502 GO:0033356 GO:0034641 GO:0034654 GO:0042221 GO:0042995 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046398 GO:0046483 GO:0046686 GO:0047338 GO:0047350 GO:0048229 GO:0048856 GO:0050896 GO:0051748 GO:0052573 GO:0055086 GO:0070569 GO:0071704 GO:0090406 GO:0120025 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko00052 ko00053 ko00520 ko01100 ko01130 map00040 map00052 map00053 map00520 map01100 map01130

Pfam Domains

Protein Families

UDPGP

Protein Analysis

597

Amino Acids

66.11

Weight (kDa)

5.93

Isoelectric Point (pI)

34.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGP	PF01704	112 - 270	3.7e-16	UTP--glucose-1-phosphate uridylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52560
fragaria_vesca	FvH4_2g28000 FvH4_2g28000
malus_domestica	MD15G1133100.v1.1
prunus_persica	Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1
pyrus_communis	pycom15g12000
rosa_chinensis	RchiOBHm_Chr6g0296821
rosa_laevigata	RLG00000011655
rosa_multiflora	Rmu_sc0009497.1_g000007
rosa_roxburghii	Rroxscaffold_176G00431360 Rroxscaffold_7G00171130 Rroxscaffold_7G00203680 Rroxscaffold_7G00203690
rosa_rugosa	Rorug04G0447400 Rorug04G0447500 Rorug04G0447600 Rorug04G0447600 Rorug04G0447600 Rorug04G0447700 Rorug04G0447800 Rorug06G0266800
rosa_samantha	Rh5BG073600 Rh6BG385800 Rh6DG378100
rosa_wichuraiana	Rw6G033000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	551
AasI	GACNNNNNNGTC	1 cut(s)	1040
Acc65I	GGTACC	1 cut(s)	1333
AccB1I	GGYRCC	2 cut(s)	1139, 1333
AccB7I	CCANNNNNTGG	1 cut(s)	263
AccI	GTMKAC	2 cut(s)	693, 1565
AciI	CCGC	4 cut(s)	9, 48, 233, 1505
AclWI	GGATC	5 cut(s)	998, 1427, 1611, 1684, 1697
AcoI	YGGCCR	1 cut(s)	123
AcsI	RAATTY	4 cut(s)	301, 537, 601, 849
AcuI	CTGAAG	1 cut(s)	1704
AfaI	GTAC	8 cut(s)	710, 887, 992, 1112, 1335, 1440, 1674, 1725
AfiI	CCNNNNNNNGG	3 cut(s)	263, 1073, 1206
AgsI	TTSAA	9 cut(s)	180, 240, 301, 494, 844, 1453, 1469, 1697, 1769
AjnI	CCWGG	2 cut(s)	187, 1072
AjuI	GAANNNNNNNTTGG	2 cut(s)	522, 554
Alw21I	GWGCWC	1 cut(s)	1125
Alw26I	GTCTC	5 cut(s)	329, 431, 470, 1046, 1403
AlwI	GGATC	5 cut(s)	998, 1427, 1611, 1684, 1697
AlwNI	CAGNNNCTG	1 cut(s)	1727
AoxI	GGCC	5 cut(s)	114, 123, 769, 1475, 1582
ApeKI	GCWGC	2 cut(s)	362, 1325
ApoI	RAATTY	4 cut(s)	301, 537, 601, 849
AseI	ATTAAT	1 cut(s)	1091
Asp718I	GGTACC	1 cut(s)	1333
AspS9I	GGNCC	3 cut(s)	114, 1106, 1582
AsuHPI	GGTGA	7 cut(s)	175, 302, 320, 533, 752, 988, 1049
AsuNHI	GCTAGC	1 cut(s)	500
AvaII	GGWCC	1 cut(s)	1106
AxyI	CCTNAGG	2 cut(s)	1317, 1728
BaeGI	GKGCMC	1 cut(s)	1624
BaeI	ACNNNNGTAYC	4 cut(s)	1707, 1707, 1740, 1740
BamHI	GGATCC	1 cut(s)	1689
BanI	GGYRCC	2 cut(s)	1139, 1333
BanII	GRGCYC	1 cut(s)	1125
BarI	GAAGNNNNNNTAC	2 cut(s)	1656, 1688
BauI	CACGAG	1 cut(s)	1479
Bbv12I	GWGCWC	1 cut(s)	1125
BbvI	GCAGC	2 cut(s)	349, 1312
BccI	CCATC	6 cut(s)	79, 257, 798, 956, 1258, 1610
BceAI	ACGGC	2 cut(s)	110, 1569
BciT130I	CCWGG	2 cut(s)	189, 1074
BciVI	GTATCC	1 cut(s)	398
BclI	TGATCA	2 cut(s)	157, 978
BcoDI	GTCTC	5 cut(s)	329, 431, 470, 1046, 1403
BfaI	CTAG	6 cut(s)	219, 501, 765, 902, 1179, 1257
BfuI	GTATCC	1 cut(s)	398
BglI	GCCNNNNNGGC	1 cut(s)	122
BisI	GCNGC	2 cut(s)	363, 1326
BlsI	GCNGC	2 cut(s)	364, 1327
Bme1390I	CCNGG	2 cut(s)	189, 1074
Bme18I	GGWCC	1 cut(s)	1106
BmgT120I	GGNCC	3 cut(s)	114, 1106, 1582
BmiI	GGNNCC	5 cut(s)	621, 1141, 1281, 1335, 1691
BmrFI	CCNGG	2 cut(s)	189, 1074
BmsI	GCATC	6 cut(s)	209, 667, 866, 1165, 1212, 1312
BmtI	GCTAGC	1 cut(s)	504
BoxI	GACNNNNGTC	1 cut(s)	341
BpmI	CTGGAG	4 cut(s)	8, 402, 1389, 1437
Bpu10I	CCTNAGC	1 cut(s)	1329
Bsa29I	ATCGAT	1 cut(s)	1632
BsaAI	YACGTR	1 cut(s)	701
BsaJI	CCNNGG	4 cut(s)	188, 1072, 1073, 1283
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 1231, 1261, 1410, 1440
Bsc4I	CCNNNNNNNGG	3 cut(s)	263, 1073, 1206
Bse118I	RCCGGY	1 cut(s)	121
Bse1I	ACTGG	5 cut(s)	343, 799, 1027, 1060, 1436
Bse21I	CCTNAGG	2 cut(s)	1317, 1728
BseBI	CCWGG	2 cut(s)	189, 1074
BseCI	ATCGAT	1 cut(s)	1632
BseDI	CCNNGG	4 cut(s)	188, 1072, 1073, 1283
BseGI	GGATG	3 cut(s)	139, 1327, 1621
BseLI	CCNNNNNNNGG	3 cut(s)	263, 1073, 1206
BseMII	CTCAG	6 cut(s)	1308, 1420, 1571, 1719, 1727, 1776
BseNI	ACTGG	5 cut(s)	343, 799, 1027, 1060, 1436
BseRI	GAGGAG	4 cut(s)	32, 347, 764, 1133
BseSI	GKGCMC	1 cut(s)	1624
BseX3I	CGGCCG	1 cut(s)	123
BseXI	GCAGC	2 cut(s)	349, 1312
Bsh1285I	CGRYCG	1 cut(s)	126
BshFI	GGCC	5 cut(s)	116, 125, 771, 1477, 1584
BshNI	GGYRCC	2 cut(s)	1139, 1333
BshVI	ATCGAT	1 cut(s)	1632
BsiEI	CGRYCG	1 cut(s)	126
BsiHKAI	GWGCWC	1 cut(s)	1125
BsiSI	CCGG	2 cut(s)	122, 246
BslI	CCNNNNNNNGG	3 cut(s)	263, 1073, 1206
BsmAI	GTCTC	5 cut(s)	329, 431, 470, 1046, 1403
BsmBI	CGTCTC	1 cut(s)	431
BsmI	GAATGC	2 cut(s)	530, 748
BsnI	GGCC	5 cut(s)	116, 125, 771, 1477, 1584
Bsp1286I	GDGCHC	2 cut(s)	1125, 1624
Bsp143I	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
Bsp19I	CCATGG	1 cut(s)	1283
BspACI	CCGC	4 cut(s)	9, 48, 233, 1505
BspANI	GGCC	5 cut(s)	116, 125, 771, 1477, 1584
BspCNI	CTCAG	6 cut(s)	1309, 1419, 1570, 1720, 1728, 1777
BspDI	ATCGAT	1 cut(s)	1632
BspLI	GGNNCC	5 cut(s)	621, 1141, 1281, 1335, 1691
BspOI	GCTAGC	1 cut(s)	504
BspPI	GGATC	5 cut(s)	998, 1427, 1611, 1684, 1697
BspQI	GCTCTTC	2 cut(s)	432, 495
BspT107I	GGYRCC	2 cut(s)	1139, 1333
BsrFI	RCCGGY	1 cut(s)	121
BsrI	ACTGG	5 cut(s)	343, 799, 1027, 1060, 1436
BssAI	RCCGGY	1 cut(s)	121
BssECI	CCNNGG	4 cut(s)	188, 1072, 1073, 1283
BssMI	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
BssSI	CACGAG	1 cut(s)	1479
BssT1I	CCWWGG	1 cut(s)	1283
Bst2BI	CACGAG	1 cut(s)	1479
Bst2UI	CCWGG	2 cut(s)	189, 1074
Bst4CI	ACNGT	9 cut(s)	228, 583, 740, 885, 1037, 1049, 1273, 1397, 1457
Bst6I	CTCTTC	2 cut(s)	432, 495
BstAPI	GCANNNNNTGC	1 cut(s)	686
BstBAI	YACGTR	1 cut(s)	701
BstC8I	GCNNGC	7 cut(s)	66, 93, 123, 502, 661, 687, 1290
BstDEI	CTNAG	9 cut(s)	664, 1013, 1317, 1329, 1406, 1557, 1728, 1736, 1785
BstDSI	CCRYGG	1 cut(s)	1283
BstF5I	GGATG	3 cut(s)	139, 1327, 1621
BstKTI	GATC	7 cut(s)	160, 971, 981, 1006, 1435, 1606, 1692
BstMAI	GTCTC	5 cut(s)	329, 431, 470, 1046, 1403
BstMBI	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
BstMCI	CGRYCG	1 cut(s)	126
BstMWI	GCNNNNNNNGC	4 cut(s)	122, 643, 686, 926
BstNI	CCWGG	2 cut(s)	189, 1074
BstNSI	RCATGY	1 cut(s)	663
BstPAI	GACNNNNGTC	1 cut(s)	341
BstSCI	CCNGG	2 cut(s)	187, 1072
BstSLI	GKGCMC	1 cut(s)	1624
BstV1I	GCAGC	2 cut(s)	349, 1312
BstX2I	RGATCY	2 cut(s)	1603, 1689
BstYI	RGATCY	2 cut(s)	1603, 1689
BstZI	CGGCCG	1 cut(s)	123
Bsu15I	ATCGAT	1 cut(s)	1632
Bsu36I	CCTNAGG	2 cut(s)	1317, 1728
BsuI	GTATCC	1 cut(s)	398
BsuRI	GGCC	5 cut(s)	116, 125, 771, 1477, 1584
BsuTUI	ATCGAT	1 cut(s)	1632
BtgI	CCRYGG	1 cut(s)	1283
BtsCI	GGATG	3 cut(s)	139, 1327, 1621
BtsI	GCAGTG	1 cut(s)	1007
BtsIMutI	CAGTG	4 cut(s)	777, 792, 1007, 1543
Cac8I	GCNNGC	7 cut(s)	66, 93, 123, 502, 661, 687, 1290
CaiI	CAGNNNCTG	1 cut(s)	1727
Cfr10I	RCCGGY	1 cut(s)	121
Cfr13I	GGNCC	3 cut(s)	114, 1106, 1582
ClaI	ATCGAT	1 cut(s)	1632
CseI	GACGC	1 cut(s)	506
Csp6I	GTAC	8 cut(s)	709, 886, 991, 1111, 1334, 1439, 1673, 1724
CviAII	CATG	6 cut(s)	660, 731, 890, 956, 1284, 1488
CviQI	GTAC	8 cut(s)	709, 886, 991, 1111, 1334, 1439, 1673, 1724
DdeI	CTNAG	9 cut(s)	664, 1013, 1317, 1329, 1406, 1557, 1728, 1736, 1785
DpnI	GATC	7 cut(s)	159, 970, 980, 1005, 1434, 1605, 1691
DpnII	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
DraI	TTTAAA	2 cut(s)	594, 642
DrdI	GACNNNNNNGTC	1 cut(s)	1040
DseDI	GACNNNNNNGTC	1 cut(s)	1040
EaeI	YGGCCR	1 cut(s)	123
EagI	CGGCCG	1 cut(s)	123
Eam1104I	CTCTTC	2 cut(s)	432, 495
EarI	CTCTTC	2 cut(s)	432, 495
EciI	GGCGGA	1 cut(s)	37
Ecl136II	GAGCTC	1 cut(s)	1123
EclXI	CGGCCG	1 cut(s)	123
Eco130I	CCWWGG	1 cut(s)	1283
Eco24I	GRGCYC	1 cut(s)	1125
Eco47I	GGWCC	1 cut(s)	1106
Eco52I	CGGCCG	1 cut(s)	123
Eco53kI	GAGCTC	1 cut(s)	1123
Eco57I	CTGAAG	1 cut(s)	1704
Eco81I	CCTNAGG	2 cut(s)	1317, 1728
EcoICRI	GAGCTC	1 cut(s)	1123
EcoRI	GAATTC	1 cut(s)	849
EcoRII	CCWGG	2 cut(s)	187, 1072
EcoT14I	CCWWGG	1 cut(s)	1283
EcoT38I	GRGCYC	1 cut(s)	1125
ErhI	CCWWGG	1 cut(s)	1283
Esp3I	CGTCTC	1 cut(s)	431
FaeI	CATG	6 cut(s)	663, 734, 893, 959, 1287, 1491
FalI	AAGNNNNNCTT	4 cut(s)	134, 166, 621, 653
FatI	CATG	6 cut(s)	659, 730, 889, 955, 1283, 1487
FbaI	TGATCA	2 cut(s)	157, 978
FblI	GTMKAC	2 cut(s)	693, 1565
Fnu4HI	GCNGC	2 cut(s)	363, 1326
FokI	GGATG	3 cut(s)	146, 1334, 1628
FriOI	GRGCYC	1 cut(s)	1125
Fsp4HI	GCNGC	2 cut(s)	363, 1326
FspBI	CTAG	6 cut(s)	219, 501, 765, 902, 1179, 1257
GluI	GCNGC	2 cut(s)	363, 1326
GsuI	CTGGAG	4 cut(s)	8, 402, 1389, 1437
HaeIII	GGCC	5 cut(s)	116, 125, 771, 1477, 1584
HapII	CCGG	2 cut(s)	122, 246
HgaI	GACGC	1 cut(s)	506
Hin1II	CATG	6 cut(s)	663, 734, 893, 959, 1287, 1491
HincII	GTYRAC	3 cut(s)	895, 1045, 1159
HindII	GTYRAC	3 cut(s)	895, 1045, 1159
HindIII	AAGCTT	1 cut(s)	635
HinfI	GANTC	7 cut(s)	166, 236, 253, 715, 1266, 1419, 1755
HpaI	GTTAAC	2 cut(s)	895, 1159
HpaII	CCGG	2 cut(s)	122, 246
HphI	GGTGA	7 cut(s)	175, 302, 320, 533, 752, 988, 1049
Hpy166II	GTNNAC	6 cut(s)	509, 694, 895, 1045, 1159, 1566
Hpy188I	TCNGA	7 cut(s)	357, 562, 720, 1409, 1560, 1754, 1786
Hpy188III	TCNNGA	6 cut(s)	25, 475, 494, 1031, 1368, 1460
Hpy8I	GTNNAC	6 cut(s)	509, 694, 895, 1045, 1159, 1566
Hpy99I	CGWCG	1 cut(s)	131
HpyAV	CCTTC	4 cut(s)	64, 285, 512, 1658
HpyCH4III	ACNGT	9 cut(s)	228, 583, 740, 885, 1037, 1049, 1273, 1397, 1457
HpyCH4IV	ACGT	2 cut(s)	397, 700
HpyF10VI	GCNNNNNNNGC	4 cut(s)	122, 643, 686, 926
HpyF3I	CTNAG	9 cut(s)	664, 1013, 1317, 1329, 1406, 1557, 1728, 1736, 1785
HpySE526I	ACGT	2 cut(s)	397, 700
Hsp92II	CATG	6 cut(s)	663, 734, 893, 959, 1287, 1491
KpnI	GGTACC	1 cut(s)	1337
KroI	GCCGGC	1 cut(s)	121
KroNI	GCCGGC	1 cut(s)	123
Ksp22I	TGATCA	2 cut(s)	157, 978
KspAI	GTTAAC	2 cut(s)	895, 1159
Kzo9I	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
LguI	GCTCTTC	2 cut(s)	432, 495
LmnI	GCTCC	4 cut(s)	61, 449, 1120, 1279
Lsp1109I	GCAGC	2 cut(s)	349, 1312
LweI	GCATC	6 cut(s)	209, 667, 866, 1165, 1212, 1312
MaeI	CTAG	6 cut(s)	219, 501, 765, 902, 1179, 1257
MaeII	ACGT	2 cut(s)	397, 700
MaeIII	GTNAC	4 cut(s)	701, 788, 1483, 1507
MalI	GATC	7 cut(s)	159, 970, 980, 1005, 1434, 1605, 1691
MboI	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
MboII	GAAGA	3 cut(s)	419, 482, 808
MfeI	CAATTG	2 cut(s)	930, 1772
MflI	RGATCY	2 cut(s)	1603, 1689
MhlI	GDGCHC	2 cut(s)	1125, 1624
MlyI	GAGTC	1 cut(s)	1428
MmeI	TCCRAC	2 cut(s)	308, 1191
MroNI	GCCGGC	1 cut(s)	121
MslI	CAYNNNNRTG	3 cut(s)	741, 960, 1274
MspI	CCGG	2 cut(s)	122, 246
MspR9I	CCNGG	2 cut(s)	189, 1074
MunI	CAATTG	2 cut(s)	930, 1772
Mva1269I	GAATGC	2 cut(s)	530, 748
MvaI	CCWGG	2 cut(s)	189, 1074
MwoI	GCNNNNNNNGC	4 cut(s)	122, 643, 686, 926
NaeI	GCCGGC	1 cut(s)	123
NcoI	CCATGG	1 cut(s)	1283
NdeII	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
NgoMIV	GCCGGC	1 cut(s)	121
NheI	GCTAGC	1 cut(s)	500
NlaIII	CATG	6 cut(s)	663, 734, 893, 959, 1287, 1491
NlaIV	GGNNCC	5 cut(s)	621, 1141, 1281, 1335, 1691
NmeAIII	GCCGAG	2 cut(s)	37, 142
NmuCI	GTSAC	3 cut(s)	788, 1483, 1507
NspI	RCATGY	1 cut(s)	663
PaeI	GCATGC	1 cut(s)	663
PasI	CCCWGGG	1 cut(s)	1073
PciSI	GCTCTTC	2 cut(s)	432, 495
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PctI	GAATGC	2 cut(s)	530, 748
PdiI	GCCGGC	1 cut(s)	123
PfeI	GAWTC	6 cut(s)	166, 236, 253, 715, 1266, 1755
PflMI	CCANNNNNTGG	1 cut(s)	263
PkrI	GCNGC	2 cut(s)	364, 1327
PleI	GAGTC	1 cut(s)	1427
PpsI	GAGTC	1 cut(s)	1427
Ppu21I	YACGTR	1 cut(s)	701
PshAI	GACNNNNGTC	1 cut(s)	341
PshBI	ATTAAT	1 cut(s)	1091
PsiI	TTATAA	1 cut(s)	551
Psp124BI	GAGCTC	1 cut(s)	1125
Psp6I	CCWGG	2 cut(s)	187, 1072
PspGI	CCWGG	2 cut(s)	187, 1072
PspN4I	GGNNCC	5 cut(s)	621, 1141, 1281, 1335, 1691
PspPI	GGNCC	3 cut(s)	114, 1106, 1582
PstNI	CAGNNNCTG	1 cut(s)	1727
PsuI	RGATCY	2 cut(s)	1603, 1689
RsaI	GTAC	8 cut(s)	710, 887, 992, 1112, 1335, 1440, 1674, 1725
RsaNI	GTAC	8 cut(s)	709, 886, 991, 1111, 1334, 1439, 1673, 1724
RseI	CAYNNNNRTG	3 cut(s)	741, 960, 1274
SacI	GAGCTC	1 cut(s)	1125
SapI	GCTCTTC	2 cut(s)	432, 495
SatI	GCNGC	2 cut(s)	363, 1326
Sau3AI	GATC	7 cut(s)	157, 968, 978, 1003, 1432, 1603, 1689
Sau96I	GGNCC	3 cut(s)	114, 1106, 1582
SchI	GAGTC	1 cut(s)	1428
ScrFI	CCNGG	2 cut(s)	189, 1074
SduI	GDGCHC	2 cut(s)	1125, 1624
SfaNI	GCATC	6 cut(s)	209, 667, 866, 1165, 1212, 1312
SfiI	GGCCNNNNNGGCC	1 cut(s)	122
SinI	GGWCC	1 cut(s)	1106
SmiMI	CAYNNNNRTG	3 cut(s)	741, 960, 1274
SphI	GCATGC	1 cut(s)	663
SsiI	CCGC	4 cut(s)	9, 48, 233, 1505
SspI	AATATT	1 cut(s)	483
SspMI	CTAG	6 cut(s)	219, 501, 765, 902, 1179, 1257
SstI	GAGCTC	1 cut(s)	1125
StyD4I	CCNGG	2 cut(s)	187, 1072
StyI	CCWWGG	1 cut(s)	1283
TaaI	ACNGT	9 cut(s)	228, 583, 740, 885, 1037, 1049, 1273, 1397, 1457
TaiI	ACGT	2 cut(s)	400, 703
TaqI	TCGA	5 cut(s)	105, 129, 474, 1632, 1704
TatI	WGTACW	3 cut(s)	708, 990, 1438
TfiI	GAWTC	6 cut(s)	166, 236, 253, 715, 1266, 1755
TscAI	CASTG	4 cut(s)	784, 799, 1014, 1543
TseFI	GTSAC	3 cut(s)	788, 1483, 1507
TseI	GCWGC	2 cut(s)	362, 1325
Tsp45I	GTSAC	3 cut(s)	788, 1483, 1507
TspDTI	ATGAA	1 cut(s)	1179
TspGWI	ACGGA	3 cut(s)	268, 426, 1098
TspRI	CASTG	4 cut(s)	784, 799, 1014, 1543
Van91I	CCANNNNNTGG	1 cut(s)	263
VpaK11BI	GGWCC	1 cut(s)	1106
VspI	ATTAAT	1 cut(s)	1091
XapI	RAATTY	4 cut(s)	301, 537, 601, 849
XceI	RCATGY	1 cut(s)	663
XcmI	CCANNNNNNNNNTGG	1 cut(s)	827
XmiI	GTMKAC	2 cut(s)	693, 1565
XspI	CTAG	6 cut(s)	219, 501, 765, 902, 1179, 1257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.