Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0005321

Physical Location & Seq

Genomic Coordinates Reverse (-)

11481063 .. 11488539

Gene Structure 7477 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00171130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGCTTCCGCCGTCACCGAGCCTAATCTCCAGAGAAACCTCCACCTCCTCTCCGCCGAACAGGTGGAGCTGGCGAAGGTGCTGGTGGAGATGGGGCAGGCTCATCTGTTCGAGCATTGGGCCGAGCCGGGCGTCGACGATGACGAAAAGAAAGCCTTTTTTTATCAGGTGAGTCGCCTCAATTCAAGCTATCCAGGGGGTTTGGCATCATATATCAAAACTGCTAGAGAACTGTTAGCGGATTCAAAAGCCGGAAAGAATCCATTTGATGGCTTTACACCTTCTGTTCCAACAGGTGAAACCTTGACTTTTGGTGATGATAGCTTTATGAGTTTTGAGGAGACTGGTGTCAAAGAAGTTCAGAAAGCTGCATTTGTTCTTGTTGCTGGAGGACTTGGGGAACGTCTGGGATACAACGGAATTAAGCTTGCTCTTCCCAGAGAGACTGTCACAGGAGCGTGTTTTTTACAACATTATATCGAGACAATATTGGCTCTTCAAGAAGCTAGCTGTAAACTTGCAGAAGGTGAATGCCAAACAAAAATTCCTCTGGTTATAATGACATCAGATGACACACATTCTCGTACAGTAGAGCTTTTAGAGTCAAATTCTTATTTTGGAATGGAACCTAATCAAGTAAAGCTTTTAAAGCAGGAAAAAGTTGCATGCTTAGATGATAATGATGCGAGGCTTGCAGTAGACCCACGTAACAAGTACAGGATTCAGACCAAACCTCATGGACATGGTGATGTGCATTCACTACTCTACTCTAGTGGCCTCCTCACTGAATGGCGTGACGCTGGTTTGAGATGGGTTCTGTTCTTCCAAGATACAAATGGACTTCTGTTCAATGGAATTCCAGCATCATTGGGTGTTAGTGCTACAAGACAGTACCATGTTAACTCCCTAGCTGTTCCGCGCAAAGCAAAAGAAGCAATTGGAGGAATTACGCGACTTACTCATGCTGATGGGAGATCAATGGTGATCAATGTGGAGTACAACCAGCTTGATCCACTGCTTAGAGCAACTGGATTTCCTGACGGTGATGTCAACTGTGAGACTGGCTATTCTCCTTTCCCTGGGAATATCAACCAATTAATCTTGGAACTTGGTCCGTACATTGAGGAGCTCACAAAAACAGGAGGTGCCATACAGGAGTTTGTTAACCCAAAATACAAAGATGCTAGTAAGACTTCATTTAAGTCCTCAACTCGGTTAGAGTGTATGATGCAAGACTATCCAAAAACTTTACCTCCATCTGCTAGGGTGGGATTCACGGTAATGGAGCCATGGCTTGCTTATGCACCTGTTAAGAACAACCCTGAGGATGCTGCTAAGGTACCAAAGGGAAATCCGTATCATAGTGCAACTTCTGGAGAAATGTTGGTTTATCGTGCAAACAGTCTCATTCTCAGAAAGGCTGGAGTCCAAGTAGCTGATCCAGTACAACAGGTGTTCAACGGTCAAGAAATTGAAGTGTGGCCTCGTGTCACATGGAAACCAAAATGGGCGGTCACTTTTAAAGAAGTAAAAAACAAAGTCTGTGGAAGTAGCTCAATTTCTCAGAGGTCTACATTGGTTATTAAGGGCCGTAATATATTTGTCAAGGATCTCTGCTTGGATGGGGCACTTGTTATCGATGTTGCTGATAATAAAGAGGTAAAAGTGGAAGGTTCGGTACAGAATAAAAGCTGGATCCTTGAAAATGTCGATTACAAAGATACTTCAGTACCTGAGGAACTGAGGATAAGGGGTTTCAGAATCAACAAGATTGAACAATTGGTAAAGTCTGAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003983 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006011 GO:0006082 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009555 GO:0009987 GO:0010035 GO:0010038 GO:0010491 GO:0016740 GO:0016772 GO:0016779 GO:0017103 GO:0018130 GO:0019438 GO:0019752 GO:0032501 GO:0032502 GO:0033356 GO:0034641 GO:0034654 GO:0042221 GO:0042995 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046398 GO:0046483 GO:0046686 GO:0047338 GO:0047350 GO:0048229 GO:0048856 GO:0050896 GO:0051748 GO:0052573 GO:0055086 GO:0070569 GO:0071704 GO:0090406 GO:0120025 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko00052 ko00053 ko00520 ko01100 ko01130 map00040 map00052 map00053 map00520 map01100 map01130

Pfam Domains

Protein Families

UDPGP

Protein Analysis

599

Amino Acids

66.34

Weight (kDa)

5.98

Isoelectric Point (pI)

36.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGP	PF01704	113 - 272	1.3e-15	UTP--glucose-1-phosphate uridylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52560
fragaria_vesca	FvH4_2g28000 FvH4_2g28000
malus_domestica	MD15G1133100.v1.1
prunus_persica	Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1
pyrus_communis	pycom15g12000
rosa_chinensis	RchiOBHm_Chr6g0296821
rosa_laevigata	RLG00000011655
rosa_multiflora	Rmu_sc0009497.1_g000007
rosa_roxburghii	Rroxscaffold_176G00431360 Rroxscaffold_7G00171130 Rroxscaffold_7G00203680 Rroxscaffold_7G00203690
rosa_rugosa	Rorug04G0447400 Rorug04G0447500 Rorug04G0447600 Rorug04G0447600 Rorug04G0447600 Rorug04G0447700 Rorug04G0447800 Rorug06G0266800
rosa_samantha	Rh5BG073600 Rh6BG385800 Rh6DG378100
rosa_wichuraiana	Rw6G033000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	557
AasI	GACNNNNNNGTC	1 cut(s)	1046
Acc65I	GGTACC	1 cut(s)	1339
AccB1I	GGYRCC	2 cut(s)	1145, 1339
AccB7I	CCANNNNNTGG	1 cut(s)	269
AccI	GTMKAC	3 cut(s)	135, 699, 1571
AccII	CGCG	2 cut(s)	919, 952
AciI	CCGC	5 cut(s)	9, 54, 239, 917, 1511
AclWI	GGATC	5 cut(s)	1004, 1433, 1617, 1690, 1703
AcsI	RAATTY	3 cut(s)	543, 607, 855
AcuI	CTGAAG	1 cut(s)	1710
AcyI	GRCGYC	1 cut(s)	132
AfaI	GTAC	9 cut(s)	586, 716, 893, 998, 1118, 1341, 1446, 1680, 1731
AfiI	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
AgsI	TTSAA	8 cut(s)	186, 246, 500, 850, 1459, 1475, 1703, 1775
AjnI	CCWGG	2 cut(s)	193, 1078
AjuI	GAANNNNNNNTTGG	2 cut(s)	528, 560
Alw21I	GWGCWC	1 cut(s)	1131
Alw26I	GTCTC	5 cut(s)	335, 437, 476, 1052, 1409
AlwI	GGATC	5 cut(s)	1004, 1433, 1617, 1690, 1703
AlwNI	CAGNNNCTG	1 cut(s)	1733
AoxI	GGCC	4 cut(s)	120, 775, 1481, 1588
ApeKI	GCWGC	2 cut(s)	368, 1331
ApoI	RAATTY	3 cut(s)	543, 607, 855
AseI	ATTAAT	1 cut(s)	1097
Asp718I	GGTACC	1 cut(s)	1339
AspLEI	GCGC	1 cut(s)	921
AspS9I	GGNCC	3 cut(s)	120, 1112, 1588
AsuC2I	CCSGG	1 cut(s)	129
AsuHPI	GGTGA	8 cut(s)	7, 181, 308, 326, 539, 758, 994, 1055
AsuNHI	GCTAGC	1 cut(s)	506
AvaII	GGWCC	1 cut(s)	1112
AxyI	CCTNAGG	2 cut(s)	1323, 1734
BaeGI	GKGCMC	1 cut(s)	1630
BaeI	ACNNNNGTAYC	4 cut(s)	1713, 1713, 1746, 1746
BamHI	GGATCC	1 cut(s)	1695
BanI	GGYRCC	2 cut(s)	1145, 1339
BanII	GRGCYC	1 cut(s)	1131
BarI	GAAGNNNNNNTAC	2 cut(s)	1662, 1694
BauI	CACGAG	1 cut(s)	1485
Bbv12I	GWGCWC	1 cut(s)	1131
BbvI	GCAGC	2 cut(s)	355, 1318
BccI	CCATC	6 cut(s)	85, 263, 804, 962, 1264, 1616
BceAI	ACGGC	1 cut(s)	1575
BciT130I	CCWGG	2 cut(s)	195, 1080
BciVI	GTATCC	1 cut(s)	404
BclI	TGATCA	1 cut(s)	984
BcnI	CCSGG	1 cut(s)	129
BcoDI	GTCTC	5 cut(s)	335, 437, 476, 1052, 1409
BfaI	CTAG	6 cut(s)	225, 507, 771, 908, 1185, 1263
BfuI	GTATCC	1 cut(s)	404
BisI	GCNGC	2 cut(s)	369, 1332
BlsI	GCNGC	2 cut(s)	370, 1333
Bme1390I	CCNGG	3 cut(s)	129, 195, 1080
Bme18I	GGWCC	1 cut(s)	1112
BmgT120I	GGNCC	3 cut(s)	120, 1112, 1588
BmiI	GGNNCC	5 cut(s)	627, 1147, 1287, 1341, 1697
BmrFI	CCNGG	3 cut(s)	129, 195, 1080
BmsI	GCATC	6 cut(s)	215, 673, 872, 1171, 1218, 1318
BmtI	GCTAGC	1 cut(s)	510
BoxI	GACNNNNGTC	1 cut(s)	347
BpmI	CTGGAG	4 cut(s)	14, 408, 1395, 1443
Bpu10I	CCTNAGC	1 cut(s)	1335
BpuMI	CCSGG	1 cut(s)	129
Bsa29I	ATCGAT	1 cut(s)	1638
BsaAI	YACGTR	1 cut(s)	707
BsaHI	GRCGYC	1 cut(s)	132
BsaJI	CCNNGG	4 cut(s)	194, 1078, 1079, 1289
BsaXI	ACNNNNNCTCC	6 cut(s)	35, 65, 1237, 1267, 1416, 1446
Bsc4I	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
Bse1I	ACTGG	4 cut(s)	349, 1033, 1066, 1442
Bse21I	CCTNAGG	2 cut(s)	1323, 1734
BseBI	CCWGG	2 cut(s)	195, 1080
BseCI	ATCGAT	1 cut(s)	1638
BseDI	CCNNGG	4 cut(s)	194, 1078, 1079, 1289
BseGI	GGATG	2 cut(s)	1333, 1627
BseLI	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
BseMII	CTCAG	6 cut(s)	1314, 1426, 1577, 1725, 1733, 1782
BseNI	ACTGG	4 cut(s)	349, 1033, 1066, 1442
BseRI	GAGGAG	4 cut(s)	38, 353, 770, 1139
BseSI	GKGCMC	1 cut(s)	1630
BseXI	GCAGC	2 cut(s)	355, 1318
Bsh1236I	CGCG	2 cut(s)	919, 952
BshFI	GGCC	4 cut(s)	122, 777, 1483, 1590
BshNI	GGYRCC	2 cut(s)	1145, 1339
BshVI	ATCGAT	1 cut(s)	1638
BsiHKAI	GWGCWC	1 cut(s)	1131
BsiSI	CCGG	2 cut(s)	128, 252
BslI	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
BsmAI	GTCTC	5 cut(s)	335, 437, 476, 1052, 1409
BsmI	GAATGC	2 cut(s)	536, 754
BsnI	GGCC	4 cut(s)	122, 777, 1483, 1590
Bsp1286I	GDGCHC	2 cut(s)	1131, 1630
Bsp143I	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
Bsp19I	CCATGG	1 cut(s)	1289
BspACI	CCGC	5 cut(s)	9, 54, 239, 917, 1511
BspANI	GGCC	4 cut(s)	122, 777, 1483, 1590
BspCNI	CTCAG	6 cut(s)	1315, 1425, 1576, 1726, 1734, 1783
BspDI	ATCGAT	1 cut(s)	1638
BspFNI	CGCG	2 cut(s)	919, 952
BspLI	GGNNCC	5 cut(s)	627, 1147, 1287, 1341, 1697
BspOI	GCTAGC	1 cut(s)	510
BspPI	GGATC	5 cut(s)	1004, 1433, 1617, 1690, 1703
BspQI	GCTCTTC	2 cut(s)	438, 501
BspT107I	GGYRCC	2 cut(s)	1145, 1339
BsrI	ACTGG	4 cut(s)	349, 1033, 1066, 1442
BssECI	CCNNGG	4 cut(s)	194, 1078, 1079, 1289
BssMI	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
BssNI	GRCGYC	1 cut(s)	132
BssSI	CACGAG	1 cut(s)	1485
BssT1I	CCWWGG	1 cut(s)	1289
Bst2BI	CACGAG	1 cut(s)	1485
Bst2UI	CCWGG	2 cut(s)	195, 1080
Bst4CI	ACNGT	9 cut(s)	234, 448, 589, 891, 1043, 1055, 1279, 1403, 1463
Bst6I	CTCTTC	2 cut(s)	438, 501
BstACI	GRCGYC	1 cut(s)	132
BstBAI	YACGTR	1 cut(s)	707
BstC8I	GCNNGC	7 cut(s)	72, 99, 429, 508, 667, 693, 1296
BstDEI	CTNAG	9 cut(s)	670, 1019, 1323, 1335, 1412, 1563, 1734, 1742, 1791
BstDSI	CCRYGG	1 cut(s)	1289
BstF5I	GGATG	2 cut(s)	1333, 1627
BstFNI	CGCG	2 cut(s)	919, 952
BstHHI	GCGC	1 cut(s)	921
BstKTI	GATC	6 cut(s)	977, 987, 1012, 1441, 1612, 1698
BstMAI	GTCTC	5 cut(s)	335, 437, 476, 1052, 1409
BstMBI	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
BstMWI	GCNNNNNNNGC	3 cut(s)	649, 692, 932
BstNI	CCWGG	2 cut(s)	195, 1080
BstNSI	RCATGY	1 cut(s)	669
BstPAI	GACNNNNGTC	1 cut(s)	347
BstSCI	CCNGG	3 cut(s)	127, 193, 1078
BstSLI	GKGCMC	1 cut(s)	1630
BstUI	CGCG	2 cut(s)	919, 952
BstV1I	GCAGC	2 cut(s)	355, 1318
BstX2I	RGATCY	2 cut(s)	1609, 1695
BstYI	RGATCY	2 cut(s)	1609, 1695
Bsu15I	ATCGAT	1 cut(s)	1638
Bsu36I	CCTNAGG	2 cut(s)	1323, 1734
BsuI	GTATCC	1 cut(s)	404
BsuRI	GGCC	4 cut(s)	122, 777, 1483, 1590
BsuTUI	ATCGAT	1 cut(s)	1638
BtgI	CCRYGG	1 cut(s)	1289
BtsCI	GGATG	2 cut(s)	1333, 1627
BtsI	GCAGTG	1 cut(s)	1013
BtsIMutI	CAGTG	2 cut(s)	783, 1013
Cac8I	GCNNGC	7 cut(s)	72, 99, 429, 508, 667, 693, 1296
CaiI	CAGNNNCTG	1 cut(s)	1733
CfoI	GCGC	1 cut(s)	921
Cfr13I	GGNCC	3 cut(s)	120, 1112, 1588
ClaI	ATCGAT	1 cut(s)	1638
CseI	GACGC	2 cut(s)	121, 806
Csp6I	GTAC	9 cut(s)	585, 715, 892, 997, 1117, 1340, 1445, 1679, 1730
CspCI	CAANNNNNGTGG	2 cut(s)	1525, 1560
CviAII	CATG	7 cut(s)	666, 737, 743, 896, 962, 1290, 1494
CviQI	GTAC	9 cut(s)	585, 715, 892, 997, 1117, 1340, 1445, 1679, 1730
DdeI	CTNAG	9 cut(s)	670, 1019, 1323, 1335, 1412, 1563, 1734, 1742, 1791
DpnI	GATC	6 cut(s)	976, 986, 1011, 1440, 1611, 1697
DpnII	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
DraI	TTTAAA	2 cut(s)	648, 1522
DrdI	GACNNNNNNGTC	1 cut(s)	1046
DseDI	GACNNNNNNGTC	1 cut(s)	1046
Eam1104I	CTCTTC	2 cut(s)	438, 501
EarI	CTCTTC	2 cut(s)	438, 501
EciI	GGCGGA	1 cut(s)	43
Ecl136II	GAGCTC	1 cut(s)	1129
Eco130I	CCWWGG	1 cut(s)	1289
Eco24I	GRGCYC	1 cut(s)	1131
Eco47I	GGWCC	1 cut(s)	1112
Eco53kI	GAGCTC	1 cut(s)	1129
Eco57I	CTGAAG	1 cut(s)	1710
Eco81I	CCTNAGG	2 cut(s)	1323, 1734
EcoICRI	GAGCTC	1 cut(s)	1129
EcoRI	GAATTC	1 cut(s)	855
EcoRII	CCWGG	2 cut(s)	193, 1078
EcoT14I	CCWWGG	1 cut(s)	1289
EcoT38I	GRGCYC	1 cut(s)	1131
ErhI	CCWWGG	1 cut(s)	1289
FaeI	CATG	7 cut(s)	669, 740, 746, 899, 965, 1293, 1497
FalI	AAGNNNNNCTT	4 cut(s)	140, 172, 627, 659
FatI	CATG	7 cut(s)	665, 736, 742, 895, 961, 1289, 1493
FbaI	TGATCA	1 cut(s)	984
FblI	GTMKAC	3 cut(s)	135, 699, 1571
Fnu4HI	GCNGC	2 cut(s)	369, 1332
FokI	GGATG	2 cut(s)	1340, 1634
FriOI	GRGCYC	1 cut(s)	1131
Fsp4HI	GCNGC	2 cut(s)	369, 1332
FspBI	CTAG	6 cut(s)	225, 507, 771, 908, 1185, 1263
GlaI	GCGC	1 cut(s)	920
GluI	GCNGC	2 cut(s)	369, 1332
GsuI	CTGGAG	4 cut(s)	14, 408, 1395, 1443
HaeIII	GGCC	4 cut(s)	122, 777, 1483, 1590
HapII	CCGG	2 cut(s)	128, 252
HgaI	GACGC	2 cut(s)	121, 806
HhaI	GCGC	1 cut(s)	921
Hin1I	GRCGYC	1 cut(s)	132
Hin1II	CATG	7 cut(s)	669, 740, 746, 899, 965, 1293, 1497
Hin6I	GCGC	1 cut(s)	919
HinP1I	GCGC	1 cut(s)	919
HincII	GTYRAC	4 cut(s)	136, 901, 1051, 1165
HindII	GTYRAC	4 cut(s)	136, 901, 1051, 1165
HindIII	AAGCTT	2 cut(s)	425, 641
HinfI	GANTC	8 cut(s)	172, 242, 259, 602, 721, 1272, 1425, 1761
HpaI	GTTAAC	2 cut(s)	901, 1165
HpaII	CCGG	2 cut(s)	128, 252
HphI	GGTGA	8 cut(s)	7, 181, 308, 326, 539, 758, 994, 1055
Hpy166II	GTNNAC	7 cut(s)	136, 515, 700, 901, 1051, 1165, 1572
Hpy188I	TCNGA	7 cut(s)	363, 568, 726, 1415, 1566, 1760, 1792
Hpy188III	TCNNGA	6 cut(s)	31, 481, 500, 1037, 1374, 1466
Hpy8I	GTNNAC	7 cut(s)	136, 515, 700, 901, 1051, 1165, 1572
Hpy99I	CGWCG	2 cut(s)	137, 140
HpyAV	CCTTC	4 cut(s)	70, 291, 518, 1664
HpyCH4III	ACNGT	9 cut(s)	234, 448, 589, 891, 1043, 1055, 1279, 1403, 1463
HpyCH4IV	ACGT	2 cut(s)	403, 706
HpyCH4V	TGCA	9 cut(s)	371, 521, 665, 695, 754, 1231, 1304, 1367, 1397
HpyF10VI	GCNNNNNNNGC	3 cut(s)	649, 692, 932
HpyF3I	CTNAG	9 cut(s)	670, 1019, 1323, 1335, 1412, 1563, 1734, 1742, 1791
HpySE526I	ACGT	2 cut(s)	403, 706
Hsp92I	GRCGYC	1 cut(s)	132
Hsp92II	CATG	7 cut(s)	669, 740, 746, 899, 965, 1293, 1497
HspAI	GCGC	1 cut(s)	919
KpnI	GGTACC	1 cut(s)	1343
Ksp22I	TGATCA	1 cut(s)	984
KspAI	GTTAAC	2 cut(s)	901, 1165
Kzo9I	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
LguI	GCTCTTC	2 cut(s)	438, 501
LmnI	GCTCC	4 cut(s)	67, 455, 1126, 1285
Lsp1109I	GCAGC	2 cut(s)	355, 1318
LweI	GCATC	6 cut(s)	215, 673, 872, 1171, 1218, 1318
MaeI	CTAG	6 cut(s)	225, 507, 771, 908, 1185, 1263
MaeII	ACGT	2 cut(s)	403, 706
MaeIII	GTNAC	6 cut(s)	13, 448, 707, 794, 1489, 1513
MalI	GATC	6 cut(s)	976, 986, 1011, 1440, 1611, 1697
MboI	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
MboII	GAAGA	3 cut(s)	425, 488, 814
MfeI	CAATTG	2 cut(s)	936, 1778
MflI	RGATCY	2 cut(s)	1609, 1695
MhlI	GDGCHC	2 cut(s)	1131, 1630
MlyI	GAGTC	3 cut(s)	181, 611, 1434
MmeI	TCCRAC	1 cut(s)	314
MseI	TTAA	9 cut(s)	423, 647, 900, 1097, 1164, 1200, 1311, 1521, 1584
MslI	CAYNNNNRTG	4 cut(s)	741, 747, 966, 1280
MspI	CCGG	2 cut(s)	128, 252
MspR9I	CCNGG	3 cut(s)	129, 195, 1080
MunI	CAATTG	2 cut(s)	936, 1778
Mva1269I	GAATGC	2 cut(s)	536, 754
MvaI	CCWGG	2 cut(s)	195, 1080
MvnI	CGCG	2 cut(s)	919, 952
MwoI	GCNNNNNNNGC	3 cut(s)	649, 692, 932
NciI	CCSGG	1 cut(s)	129
NcoI	CCATGG	1 cut(s)	1289
NdeII	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
NheI	GCTAGC	1 cut(s)	506
NlaIII	CATG	7 cut(s)	669, 740, 746, 899, 965, 1293, 1497
NlaIV	GGNNCC	5 cut(s)	627, 1147, 1287, 1341, 1697
NmeAIII	GCCGAG	1 cut(s)	148
NmuCI	GTSAC	5 cut(s)	13, 448, 794, 1489, 1513
NspI	RCATGY	1 cut(s)	669
PaeI	GCATGC	1 cut(s)	669
PasI	CCCWGGG	1 cut(s)	1079
PciSI	GCTCTTC	2 cut(s)	438, 501
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	2 cut(s)	536, 754
PfeI	GAWTC	5 cut(s)	242, 259, 721, 1272, 1761
PflMI	CCANNNNNTGG	1 cut(s)	269
PkrI	GCNGC	2 cut(s)	370, 1333
PleI	GAGTC	3 cut(s)	180, 610, 1433
PpsI	GAGTC	3 cut(s)	180, 610, 1433
Ppu21I	YACGTR	1 cut(s)	707
PshAI	GACNNNNGTC	1 cut(s)	347
PshBI	ATTAAT	1 cut(s)	1097
PsiI	TTATAA	1 cut(s)	557
Psp124BI	GAGCTC	1 cut(s)	1131
Psp6I	CCWGG	2 cut(s)	193, 1078
PspGI	CCWGG	2 cut(s)	193, 1078
PspN4I	GGNNCC	5 cut(s)	627, 1147, 1287, 1341, 1697
PspPI	GGNCC	3 cut(s)	120, 1112, 1588
PstNI	CAGNNNCTG	1 cut(s)	1733
PsuI	RGATCY	2 cut(s)	1609, 1695
RsaI	GTAC	9 cut(s)	586, 716, 893, 998, 1118, 1341, 1446, 1680, 1731
RsaNI	GTAC	9 cut(s)	585, 715, 892, 997, 1117, 1340, 1445, 1679, 1730
RseI	CAYNNNNRTG	4 cut(s)	741, 747, 966, 1280
SacI	GAGCTC	1 cut(s)	1131
SalI	GTCGAC	1 cut(s)	134
SapI	GCTCTTC	2 cut(s)	438, 501
SaqAI	TTAA	9 cut(s)	423, 647, 900, 1097, 1164, 1200, 1311, 1521, 1584
SatI	GCNGC	2 cut(s)	369, 1332
Sau3AI	GATC	6 cut(s)	974, 984, 1009, 1438, 1609, 1695
Sau96I	GGNCC	3 cut(s)	120, 1112, 1588
SchI	GAGTC	3 cut(s)	181, 611, 1434
ScrFI	CCNGG	3 cut(s)	129, 195, 1080
SduI	GDGCHC	2 cut(s)	1131, 1630
SfaNI	GCATC	6 cut(s)	215, 673, 872, 1171, 1218, 1318
SgrDI	CGTCGACG	1 cut(s)	134
SinI	GGWCC	1 cut(s)	1112
SmiMI	CAYNNNNRTG	4 cut(s)	741, 747, 966, 1280
SphI	GCATGC	1 cut(s)	669
SsiI	CCGC	5 cut(s)	9, 54, 239, 917, 1511
SspI	AATATT	1 cut(s)	489
SspMI	CTAG	6 cut(s)	225, 507, 771, 908, 1185, 1263
SstI	GAGCTC	1 cut(s)	1131
StyD4I	CCNGG	3 cut(s)	127, 193, 1078
StyI	CCWWGG	1 cut(s)	1289
TaaI	ACNGT	9 cut(s)	234, 448, 589, 891, 1043, 1055, 1279, 1403, 1463
TaiI	ACGT	2 cut(s)	406, 709
TaqI	TCGA	5 cut(s)	111, 135, 480, 1638, 1710
TatI	WGTACW	3 cut(s)	714, 996, 1444
TfiI	GAWTC	5 cut(s)	242, 259, 721, 1272, 1761
Tru1I	TTAA	9 cut(s)	423, 647, 900, 1097, 1164, 1200, 1311, 1521, 1584
Tru9I	TTAA	9 cut(s)	423, 647, 900, 1097, 1164, 1200, 1311, 1521, 1584
TscAI	CASTG	2 cut(s)	790, 1020
TseFI	GTSAC	5 cut(s)	13, 448, 794, 1489, 1513
TseI	GCWGC	2 cut(s)	368, 1331
Tsp45I	GTSAC	5 cut(s)	13, 448, 794, 1489, 1513
TspDTI	ATGAA	1 cut(s)	1185
TspGWI	ACGGA	3 cut(s)	432, 1104, 1344
TspRI	CASTG	2 cut(s)	790, 1020
Van91I	CCANNNNNTGG	1 cut(s)	269
VpaK11BI	GGWCC	1 cut(s)	1112
VspI	ATTAAT	1 cut(s)	1097
XapI	RAATTY	3 cut(s)	543, 607, 855
XceI	RCATGY	1 cut(s)	669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	833
XmiI	GTMKAC	3 cut(s)	135, 699, 1571
XspI	CTAG	6 cut(s)	225, 507, 771, 908, 1185, 1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.