Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009497.1

Orthogroup ID

OG0005321

Physical Location & Seq

Genomic Coordinates Reverse (-)

29434 .. 38625

Gene Structure 9192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009497.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

atggcttccgccgtcgccgagcctaatctccacagaaacctccacctcctctccgccgaacaggtggagctggcgaaggtgctggtggagatggggcaggctcatctgttcgagcattgggccgagccggccgtcgacgatgacgaaaagaaagccttttttgatcaggtgagtcggctcaattcaagctatccagggggtttggcatcatatatcaaaactgctagagaactgttggcagattcaaaagccggaaagaatccatttgatggctttacaccttccgttccaacaggtgaaaccttgaattttggtgatgatagctttatgagttttgaggagactggtgtcaaagaagttcggaaagctgcatttgttctcgttgctggaggacttggggaacgtcttggatacaacggaattaaggttgctcttcccagagagacgaccacaggagcgtgttttttacaacattatatcgagacaatattggctcttcaagacgctagctgtaaacttgcagaaggtgaatgccaaacaaaaattcctctggttataatgacatcagatgacacacattctcgtacagaagagcttttaaagacaaattcttattttggaatggaacctaatcaagtaaagcttttaaagcaggaaaaagttgcatgcttagatgataatgatgcaaggcttgcagtagacccacgtaacaagtacaggattcagaccaaacctcatggacacggtgatgtgcattcactactctactctagtggcctcctcactgaatggcgtgacactggtttgagatgggttctgttcttccaagatacaaatggacttctgttcaatggaattccagcatcattgggtgttagtgctacaagacagtaccatgttaactccctagctgttccacgcaaagcaaaagaagcaattggaggaattacccgacttactcatgctgatgggagatcaatggtgatcaatgtggagtacaaccagcttgacccactgcttagagcaactggatttcctgacggtgatgtcaactgtgagactggctattctcctttccctgggaatatcaaccaattaatcttggaacttggtccgtacattgaggagctcacaaaaacaggaggtgccatacaggagtttgttaacccaaaatacaaagatgctagtaagacttcatttaagtcctcaactcggttggagtgtatgatgcaagactatccaaaaactctacctccatctgctagggtgggattcacggtaatggagccatggcttgcttatgcacctgttaagaacaaccctgaggatgctgctaaggtaccaaagggaaatccatatcatagtgcaacttctggagaaatgttggtttatcgtgcaaacagtctcattctcagaaaggctggagtccaagtagctgatccagtacaacaggtgttcaacggtcaagaaattgaagtgtggcctcgtgtcacatggaaaccaaaatgggcggtcacttttaaagaagtaaaaaataaagtcagtggaagtagctcaatttctcagaggtctacattggttattaagggccgtaatatatttgtcaaggatctctgcttggatggggcacttgttatcgatgttgctgatgataaagaggtaaaagtggaaggttcggtacagaataaaggctggatccttgaaaatgtcgattacaaagatacttcagtacctgaggaactgaggataaggggtttcagaatcaacaagattgaacaattgcctagtatgtctcccctgagcagcaatgatctagagcgaattttcgagaagcttgacaagaacggagatggccaagtgagtctagaggagctcaactggctcctcgagagaattggggtcgagttcagcttgcaggagatcgagtccctggtgggcaaaccgagcctcgactggaatgacttcttgttcttctacaagtccatatctacgccggatagtaatgacggcgacgatggccatggagatggtagtgccaatgatcatgacgatgagagtgatcttgtgaaggcgttcaatgtgttcgacataaacggcgacggcttcatttcttgtgaggagcttgagaacgttctgaggagattaggagtaatggaagagaatagttgccgtgactgcagatccatgattcacgtgtacgacaccaatttggacgggctacttgatttccaggaattcaaacacatgatgttgcataataccatttcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003983 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006011 GO:0006082 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009555 GO:0009987 GO:0010035 GO:0010038 GO:0010491 GO:0016740 GO:0016772 GO:0016779 GO:0017103 GO:0018130 GO:0019438 GO:0019752 GO:0032501 GO:0032502 GO:0033356 GO:0034641 GO:0034654 GO:0042221 GO:0042995 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046398 GO:0046483 GO:0046686 GO:0047338 GO:0047350 GO:0048229 GO:0048856 GO:0050896 GO:0051748 GO:0052573 GO:0055086 GO:0070569 GO:0071704 GO:0090406 GO:0120025 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko00052 ko00053 ko00520 ko01100 ko01130 map00040 map00052 map00053 map00520 map01100 map01130

Pfam Domains

Protein Families

UDPGP

Protein Analysis

756

Amino Acids

84.15

Weight (kDa)

5.09

Isoelectric Point (pI)

36.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52560
fragaria_vesca	FvH4_2g28000 FvH4_2g28000
malus_domestica	MD15G1133100.v1.1
prunus_persica	Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1
pyrus_communis	pycom15g12000
rosa_chinensis	RchiOBHm_Chr6g0296821
rosa_laevigata	RLG00000011655
rosa_multiflora	Rmu_sc0009497.1_g000007
rosa_roxburghii	Rroxscaffold_176G00431360 Rroxscaffold_7G00171130 Rroxscaffold_7G00203680 Rroxscaffold_7G00203690
rosa_rugosa	Rorug04G0447400 Rorug04G0447500 Rorug04G0447600 Rorug04G0447600 Rorug04G0447600 Rorug04G0447700 Rorug04G0447800 Rorug06G0266800
rosa_samantha	Rh5BG073600 Rh6BG385800 Rh6DG378100
rosa_wichuraiana	Rw6G033000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	557
AasI	GACNNNNNNGTC	1 cut(s)	1046
Acc65I	GGTACC	1 cut(s)	1339
AccB1I	GGYRCC	2 cut(s)	1145, 1339
AccB7I	CCANNNNNTGG	1 cut(s)	269
AccI	GTMKAC	3 cut(s)	135, 699, 1571
AciI	CCGC	3 cut(s)	9, 54, 1511
AclI	AACGTT	1 cut(s)	2130
AclWI	GGATC	5 cut(s)	1433, 1617, 1690, 1703, 2175
AcoI	YGGCCR	3 cut(s)	129, 1852, 2017
AcsI	RAATTY	6 cut(s)	307, 543, 607, 855, 1821, 2234
AcuI	CTGAAG	1 cut(s)	1710
AcvI	CACGTG	1 cut(s)	2194
AfiI	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
AflIII	ACRYGT	1 cut(s)	2193
AjnI	CCWGG	4 cut(s)	193, 1078, 1929, 2229
AjuI	GAANNNNNNNTTGG	2 cut(s)	528, 560
Alw21I	GWGCWC	2 cut(s)	1131, 1875
Alw26I	GTCTC	6 cut(s)	335, 437, 476, 1052, 1409, 1797
AlwI	GGATC	5 cut(s)	1433, 1617, 1690, 1703, 2175
AlwNI	CAGNNNCTG	1 cut(s)	1733
Ama87I	CYCGRG	1 cut(s)	1886
AoxI	GGCC	7 cut(s)	120, 129, 775, 1481, 1588, 1852, 2017
ApeKI	GCWGC	3 cut(s)	368, 1331, 1803
ApoI	RAATTY	6 cut(s)	307, 543, 607, 855, 1821, 2234
AseI	ATTAAT	1 cut(s)	1097
Asp700I	GAANNNNTTC	2 cut(s)	1961, 2072
Asp718I	GGTACC	1 cut(s)	1339
AspS9I	GGNCC	3 cut(s)	120, 1112, 1588
AsuHPI	GGTGA	7 cut(s)	181, 308, 326, 539, 758, 994, 1055
AsuNHI	GCTAGC	1 cut(s)	506
AvaI	CYCGRG	1 cut(s)	1886
AvaII	GGWCC	1 cut(s)	1112
AxyI	CCTNAGG	2 cut(s)	1323, 1734
BaeGI	GKGCMC	1 cut(s)	1630
BaeI	ACNNNNGTAYC	4 cut(s)	1713, 1713, 1746, 1746
BalI	TGGCCA	2 cut(s)	1854, 2019
BamHI	GGATCC	1 cut(s)	1695
BanI	GGYRCC	2 cut(s)	1145, 1339
BanII	GRGCYC	2 cut(s)	1131, 1875
BarI	GAAGNNNNNNTAC	2 cut(s)	1662, 1694
BauI	CACGAG	1 cut(s)	1485
BbrPI	CACGTG	1 cut(s)	2194
Bbv12I	GWGCWC	2 cut(s)	1131, 1875
BbvI	GCAGC	3 cut(s)	355, 1318, 1815
BccI	CCATC	9 cut(s)	85, 263, 804, 962, 1264, 1616, 1844, 2009, 2021
BceAI	ACGGC	6 cut(s)	116, 1575, 2023, 2110, 2116, 2154
BciT130I	CCWGG	4 cut(s)	195, 1080, 1931, 2231
BciVI	GTATCC	1 cut(s)	404
BclI	TGATCA	3 cut(s)	163, 984, 2041
BcoDI	GTCTC	6 cut(s)	335, 437, 476, 1052, 1409, 1797
BfaI	CTAG	9 cut(s)	225, 507, 771, 908, 1185, 1263, 1785, 1814, 1865
BfmI	CTRYAG	1 cut(s)	2176
BfuI	GTATCC	1 cut(s)	404
BglI	GCCNNNNNGGC	1 cut(s)	128
BisI	GCNGC	3 cut(s)	369, 1332, 1804
BlsI	GCNGC	3 cut(s)	370, 1333, 1805
Bme1390I	CCNGG	4 cut(s)	195, 1080, 1931, 2231
Bme18I	GGWCC	1 cut(s)	1112
BmeT110I	CYCGRG	1 cut(s)	1886
BmgT120I	GGNCC	3 cut(s)	120, 1112, 1588
BmiI	GGNNCC	6 cut(s)	627, 1147, 1287, 1341, 1697, 1883
BmrFI	CCNGG	4 cut(s)	195, 1080, 1931, 2231
BmsI	GCATC	6 cut(s)	215, 673, 872, 1171, 1218, 1318
BmtI	GCTAGC	1 cut(s)	510
BoxI	GACNNNNGTC	1 cut(s)	347
BpmI	CTGGAG	3 cut(s)	408, 1395, 1443
Bpu10I	CCTNAGC	2 cut(s)	1335, 1799
BpuEI	CTTGAG	1 cut(s)	2144
Bsa29I	ATCGAT	1 cut(s)	1638
BsaAI	YACGTR	2 cut(s)	707, 2194
BsaJI	CCNNGG	6 cut(s)	194, 1078, 1079, 1289, 1929, 2020
BsaXI	ACNNNNNCTCC	8 cut(s)	35, 65, 1237, 1267, 1416, 1446, 1910, 1940
Bsc4I	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
Bse118I	RCCGGY	1 cut(s)	127
Bse1I	ACTGG	7 cut(s)	349, 805, 1033, 1066, 1442, 1883, 1958
Bse21I	CCTNAGG	2 cut(s)	1323, 1734
Bse3DI	GCAATG	1 cut(s)	1813
BseBI	CCWGG	4 cut(s)	195, 1080, 1931, 2231
BseCI	ATCGAT	1 cut(s)	1638
BseDI	CCNNGG	6 cut(s)	194, 1078, 1079, 1289, 1929, 2020
BseGI	GGATG	2 cut(s)	1333, 1627
BseLI	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
BseMI	GCAATG	1 cut(s)	1813
BseMII	CTCAG	7 cut(s)	1314, 1426, 1577, 1725, 1733, 1790, 2126
BseNI	ACTGG	7 cut(s)	349, 805, 1033, 1066, 1442, 1883, 1958
BseRI	GAGGAG	8 cut(s)	38, 353, 770, 1139, 1874, 1883, 2132, 2152
BseSI	GKGCMC	1 cut(s)	1630
BseX3I	CGGCCG	1 cut(s)	129
BseXI	GCAGC	3 cut(s)	355, 1318, 1815
Bsh1285I	CGRYCG	1 cut(s)	132
BshFI	GGCC	7 cut(s)	122, 131, 777, 1483, 1590, 1854, 2019
BshNI	GGYRCC	2 cut(s)	1145, 1339
BshVI	ATCGAT	1 cut(s)	1638
BsiEI	CGRYCG	1 cut(s)	132
BsiHKAI	GWGCWC	2 cut(s)	1131, 1875
BsiHKCI	CYCGRG	1 cut(s)	1886
BsiSI	CCGG	3 cut(s)	128, 252, 1994
BslFI	GGGAC	1 cut(s)	1912
BslI	CCNNNNNNNGG	3 cut(s)	269, 1079, 1212
BsmAI	GTCTC	6 cut(s)	335, 437, 476, 1052, 1409, 1797
BsmBI	CGTCTC	1 cut(s)	437
BsmFI	GGGAC	1 cut(s)	1912
BsmI	GAATGC	2 cut(s)	536, 754
BsnI	GGCC	7 cut(s)	122, 131, 777, 1483, 1590, 1854, 2019
BsoBI	CYCGRG	1 cut(s)	1886
Bsp1286I	GDGCHC	3 cut(s)	1131, 1630, 1875
Bsp19I	CCATGG	2 cut(s)	1289, 2020
BspACI	CCGC	3 cut(s)	9, 54, 1511
BspANI	GGCC	7 cut(s)	122, 131, 777, 1483, 1590, 1854, 2019
BspCNI	CTCAG	7 cut(s)	1315, 1425, 1576, 1726, 1734, 1791, 2127
BspDI	ATCGAT	1 cut(s)	1638
BspHI	TCATGA	1 cut(s)	2044
BspLI	GGNNCC	6 cut(s)	627, 1147, 1287, 1341, 1697, 1883
BspMAI	CTGCAG	1 cut(s)	2180
BspOI	GCTAGC	1 cut(s)	510
BspPI	GGATC	5 cut(s)	1433, 1617, 1690, 1703, 2175
BspQI	GCTCTTC	3 cut(s)	438, 501, 585
BspT107I	GGYRCC	2 cut(s)	1145, 1339
BsrDI	GCAATG	1 cut(s)	1813
BsrFI	RCCGGY	1 cut(s)	127
BsrI	ACTGG	7 cut(s)	349, 805, 1033, 1066, 1442, 1883, 1958
BssAI	RCCGGY	1 cut(s)	127
BssECI	CCNNGG	6 cut(s)	194, 1078, 1079, 1289, 1929, 2020
BssSI	CACGAG	1 cut(s)	1485
BssT1I	CCWWGG	2 cut(s)	1289, 2020
Bst2BI	CACGAG	1 cut(s)	1485
Bst2UI	CCWGG	4 cut(s)	195, 1080, 1931, 2231
Bst4CI	ACNGT	8 cut(s)	234, 746, 891, 1043, 1055, 1279, 1403, 1463
Bst6I	CTCTTC	4 cut(s)	438, 501, 585, 2151
BstAPI	GCANNNNNTGC	1 cut(s)	692
BstBAI	YACGTR	2 cut(s)	707, 2194
BstC8I	GCNNGC	8 cut(s)	72, 99, 129, 508, 667, 693, 1296, 1913
BstDSI	CCRYGG	2 cut(s)	1289, 2020
BstF5I	GGATG	2 cut(s)	1333, 1627
BstMAI	GTCTC	6 cut(s)	335, 437, 476, 1052, 1409, 1797
BstMCI	CGRYCG	1 cut(s)	132
BstMWI	GCNNNNNNNGC	8 cut(s)	128, 649, 692, 932, 1879, 1944, 2016, 2175
BstNI	CCWGG	4 cut(s)	195, 1080, 1931, 2231
BstNSI	RCATGY	1 cut(s)	669
BstPAI	GACNNNNGTC	1 cut(s)	347
BstSCI	CCNGG	4 cut(s)	193, 1078, 1929, 2229
BstSFI	CTRYAG	1 cut(s)	2176
BstSLI	GKGCMC	1 cut(s)	1630
BstV1I	GCAGC	3 cut(s)	355, 1318, 1815
BstX2I	RGATCY	3 cut(s)	1609, 1695, 2180
BstXI	CCANNNNNNTGG	1 cut(s)	2027
BstYI	RGATCY	3 cut(s)	1609, 1695, 2180
BstZI	CGGCCG	1 cut(s)	129
Bsu15I	ATCGAT	1 cut(s)	1638
Bsu36I	CCTNAGG	2 cut(s)	1323, 1734
BsuI	GTATCC	1 cut(s)	404
BsuRI	GGCC	7 cut(s)	122, 131, 777, 1483, 1590, 1854, 2019
BsuTUI	ATCGAT	1 cut(s)	1638
BtgI	CCRYGG	2 cut(s)	1289, 2020
BtsCI	GGATG	2 cut(s)	1333, 1627
BtsI	GCAGTG	1 cut(s)	1013
BtsIMutI	CAGTG	4 cut(s)	783, 798, 1013, 1549
Cac8I	GCNNGC	8 cut(s)	72, 99, 129, 508, 667, 693, 1296, 1913
CaiI	CAGNNNCTG	1 cut(s)	1733
CciI	TCATGA	1 cut(s)	2044
Cfr10I	RCCGGY	1 cut(s)	127
Cfr13I	GGNCC	3 cut(s)	120, 1112, 1588
ClaI	ATCGAT	1 cut(s)	1638
CseI	GACGC	1 cut(s)	512
DraI	TTTAAA	3 cut(s)	600, 648, 1522
DrdI	GACNNNNNNGTC	1 cut(s)	1046
DseDI	GACNNNNNNGTC	1 cut(s)	1046
EaeI	YGGCCR	3 cut(s)	129, 1852, 2017
EagI	CGGCCG	1 cut(s)	129
Eam1104I	CTCTTC	4 cut(s)	438, 501, 585, 2151
EarI	CTCTTC	4 cut(s)	438, 501, 585, 2151
EciI	GGCGGA	1 cut(s)	43
Ecl136II	GAGCTC	2 cut(s)	1129, 1873
EclXI	CGGCCG	1 cut(s)	129
Eco130I	CCWWGG	2 cut(s)	1289, 2020
Eco24I	GRGCYC	2 cut(s)	1131, 1875
Eco47I	GGWCC	1 cut(s)	1112
Eco52I	CGGCCG	1 cut(s)	129
Eco53kI	GAGCTC	2 cut(s)	1129, 1873
Eco57I	CTGAAG	1 cut(s)	1710
Eco72I	CACGTG	1 cut(s)	2194
Eco81I	CCTNAGG	2 cut(s)	1323, 1734
Eco88I	CYCGRG	1 cut(s)	1886
EcoICRI	GAGCTC	2 cut(s)	1129, 1873
EcoRI	GAATTC	2 cut(s)	855, 2234
EcoRII	CCWGG	4 cut(s)	193, 1078, 1929, 2229
EcoT14I	CCWWGG	2 cut(s)	1289, 2020
EcoT38I	GRGCYC	2 cut(s)	1131, 1875
ErhI	CCWWGG	2 cut(s)	1289, 2020
Esp3I	CGTCTC	1 cut(s)	437
FalI	AAGNNNNNCTT	4 cut(s)	140, 172, 627, 659
FaqI	GGGAC	1 cut(s)	1912
FbaI	TGATCA	3 cut(s)	163, 984, 2041
FblI	GTMKAC	3 cut(s)	135, 699, 1571
Fnu4HI	GCNGC	3 cut(s)	369, 1332, 1804
FokI	GGATG	2 cut(s)	1340, 1634
FriOI	GRGCYC	2 cut(s)	1131, 1875
Fsp4HI	GCNGC	3 cut(s)	369, 1332, 1804
FspBI	CTAG	9 cut(s)	225, 507, 771, 908, 1185, 1263, 1785, 1814, 1865
GluI	GCNGC	3 cut(s)	369, 1332, 1804
GsuI	CTGGAG	3 cut(s)	408, 1395, 1443
HaeIII	GGCC	7 cut(s)	122, 131, 777, 1483, 1590, 1854, 2019
HapII	CCGG	3 cut(s)	128, 252, 1994
HgaI	GACGC	1 cut(s)	512
HincII	GTYRAC	4 cut(s)	136, 901, 1051, 1165
HindII	GTYRAC	4 cut(s)	136, 901, 1051, 1165
HindIII	AAGCTT	2 cut(s)	641, 1832
HpaI	GTTAAC	2 cut(s)	901, 1165
HpaII	CCGG	3 cut(s)	128, 252, 1994
HphI	GGTGA	7 cut(s)	181, 308, 326, 539, 758, 994, 1055
Hpy166II	GTNNAC	8 cut(s)	136, 515, 700, 901, 1051, 1165, 1572, 2197
Hpy188I	TCNGA	7 cut(s)	363, 568, 726, 1415, 1566, 1760, 2136
Hpy8I	GTNNAC	8 cut(s)	136, 515, 700, 901, 1051, 1165, 1572, 2197
Hpy99I	CGWCG	5 cut(s)	17, 137, 140, 2015, 2102
HpyAV	CCTTC	5 cut(s)	70, 291, 518, 1664, 2062
HpyCH4III	ACNGT	8 cut(s)	234, 746, 891, 1043, 1055, 1279, 1403, 1463
HpyCH4IV	ACGT	4 cut(s)	403, 706, 2130, 2193
HpyF10VI	GCNNNNNNNGC	8 cut(s)	128, 649, 692, 932, 1879, 1944, 2016, 2175
HpySE526I	ACGT	4 cut(s)	403, 706, 2130, 2193
KpnI	GGTACC	1 cut(s)	1343
KroI	GCCGGC	1 cut(s)	127
KroNI	GCCGGC	1 cut(s)	129
Ksp22I	TGATCA	3 cut(s)	163, 984, 2041
KspAI	GTTAAC	2 cut(s)	901, 1165
LguI	GCTCTTC	3 cut(s)	438, 501, 585
LmnI	GCTCC	7 cut(s)	67, 455, 1126, 1285, 1870, 1887, 2119
Lsp1109I	GCAGC	3 cut(s)	355, 1318, 1815
LweI	GCATC	6 cut(s)	215, 673, 872, 1171, 1218, 1318
MaeI	CTAG	9 cut(s)	225, 507, 771, 908, 1185, 1263, 1785, 1814, 1865
MaeII	ACGT	4 cut(s)	403, 706, 2130, 2193
MaeIII	GTNAC	5 cut(s)	707, 794, 1489, 1513, 2171
MboII	GAAGA	6 cut(s)	425, 488, 602, 814, 1963, 2168
MfeI	CAATTG	2 cut(s)	936, 1778
MflI	RGATCY	3 cut(s)	1609, 1695, 2180
MhlI	GDGCHC	3 cut(s)	1131, 1630, 1875
MlsI	TGGCCA	2 cut(s)	1854, 2019
MluNI	TGGCCA	2 cut(s)	1854, 2019
MlyI	GAGTC	4 cut(s)	181, 1434, 1870, 1934
MmeI	TCCRAC	2 cut(s)	314, 1197
Mox20I	TGGCCA	2 cut(s)	1854, 2019
MroNI	GCCGGC	1 cut(s)	127
MroXI	GAANNNNTTC	2 cut(s)	1961, 2072
MscI	TGGCCA	2 cut(s)	1854, 2019
MslI	CAYNNNNRTG	5 cut(s)	747, 966, 1280, 2025, 2049
Msp20I	TGGCCA	2 cut(s)	1854, 2019
MspI	CCGG	3 cut(s)	128, 252, 1994
MspR9I	CCNGG	4 cut(s)	195, 1080, 1931, 2231
MunI	CAATTG	2 cut(s)	936, 1778
Mva1269I	GAATGC	2 cut(s)	536, 754
MvaI	CCWGG	4 cut(s)	195, 1080, 1931, 2231
MwoI	GCNNNNNNNGC	8 cut(s)	128, 649, 692, 932, 1879, 1944, 2016, 2175
NaeI	GCCGGC	1 cut(s)	129
NcoI	CCATGG	2 cut(s)	1289, 2020
NgoMIV	GCCGGC	1 cut(s)	127
NheI	GCTAGC	1 cut(s)	506
NlaIV	GGNNCC	6 cut(s)	627, 1147, 1287, 1341, 1697, 1883
NmeAIII	GCCGAG	2 cut(s)	43, 148
NmuCI	GTSAC	4 cut(s)	794, 1489, 1513, 2171
NspI	RCATGY	1 cut(s)	669
PaeI	GCATGC	1 cut(s)	669
PaeR7I	CTCGAG	1 cut(s)	1886
PagI	TCATGA	1 cut(s)	2044
PasI	CCCWGGG	1 cut(s)	1079
PciSI	GCTCTTC	3 cut(s)	438, 501, 585
PcsI	WCGNNNNNNNCGW	1 cut(s)	141
PctI	GAATGC	2 cut(s)	536, 754
PdiI	GCCGGC	1 cut(s)	129
PdmI	GAANNNNTTC	2 cut(s)	1961, 2072
PfeI	GAWTC	6 cut(s)	242, 259, 721, 1272, 1761, 2188
PflMI	CCANNNNNTGG	1 cut(s)	269
PfoI	TCCNGGA	1 cut(s)	2229
PkrI	GCNGC	3 cut(s)	370, 1333, 1805
PleI	GAGTC	4 cut(s)	180, 1433, 1869, 1933
PmaCI	CACGTG	1 cut(s)	2194
PmlI	CACGTG	1 cut(s)	2194
PpsI	GAGTC	4 cut(s)	180, 1433, 1869, 1933
Ppu21I	YACGTR	2 cut(s)	707, 2194
PshAI	GACNNNNGTC	1 cut(s)	347
PshBI	ATTAAT	1 cut(s)	1097
PsiI	TTATAA	1 cut(s)	557
Psp124BI	GAGCTC	2 cut(s)	1131, 1875
Psp1406I	AACGTT	1 cut(s)	2130
Psp6I	CCWGG	4 cut(s)	193, 1078, 1929, 2229
PspCI	CACGTG	1 cut(s)	2194
PspGI	CCWGG	4 cut(s)	193, 1078, 1929, 2229
PspN4I	GGNNCC	6 cut(s)	627, 1147, 1287, 1341, 1697, 1883
PspPI	GGNCC	3 cut(s)	120, 1112, 1588
PstI	CTGCAG	1 cut(s)	2180
PstNI	CAGNNNCTG	1 cut(s)	1733
PsuI	RGATCY	3 cut(s)	1609, 1695, 2180
RseI	CAYNNNNRTG	5 cut(s)	747, 966, 1280, 2025, 2049
SacI	GAGCTC	2 cut(s)	1131, 1875
SalI	GTCGAC	1 cut(s)	134
SapI	GCTCTTC	3 cut(s)	438, 501, 585
SatI	GCNGC	3 cut(s)	369, 1332, 1804
Sau96I	GGNCC	3 cut(s)	120, 1112, 1588
SchI	GAGTC	4 cut(s)	181, 1434, 1870, 1934
ScrFI	CCNGG	4 cut(s)	195, 1080, 1931, 2231
SduI	GDGCHC	3 cut(s)	1131, 1630, 1875
SfaNI	GCATC	6 cut(s)	215, 673, 872, 1171, 1218, 1318
SfcI	CTRYAG	1 cut(s)	2176
SfiI	GGCCNNNNNGGCC	1 cut(s)	128
Sfr274I	CTCGAG	1 cut(s)	1886
SgrDI	CGTCGACG	1 cut(s)	134
SinI	GGWCC	1 cut(s)	1112
SlaI	CTCGAG	1 cut(s)	1886
SmiMI	CAYNNNNRTG	5 cut(s)	747, 966, 1280, 2025, 2049
SmlI	CTYRAG	2 cut(s)	1886, 2123
SmoI	CTYRAG	2 cut(s)	1886, 2123
SphI	GCATGC	1 cut(s)	669
SsiI	CCGC	3 cut(s)	9, 54, 1511
SspI	AATATT	1 cut(s)	489
SspMI	CTAG	9 cut(s)	225, 507, 771, 908, 1185, 1263, 1785, 1814, 1865
SstI	GAGCTC	2 cut(s)	1131, 1875
StyD4I	CCNGG	4 cut(s)	193, 1078, 1929, 2229
StyI	CCWWGG	2 cut(s)	1289, 2020
TaaI	ACNGT	8 cut(s)	234, 746, 891, 1043, 1055, 1279, 1403, 1463
TaiI	ACGT	4 cut(s)	406, 709, 2133, 2196
TatI	WGTACW	3 cut(s)	714, 996, 1444
TfiI	GAWTC	6 cut(s)	242, 259, 721, 1272, 1761, 2188
TscAI	CASTG	4 cut(s)	790, 805, 1020, 1549
TseFI	GTSAC	4 cut(s)	794, 1489, 1513, 2171
TseI	GCWGC	3 cut(s)	368, 1331, 1803
Tsp45I	GTSAC	4 cut(s)	794, 1489, 1513, 2171
TspDTI	ATGAA	2 cut(s)	1185, 2095
TspGWI	ACGGA	4 cut(s)	274, 432, 1104, 1860
TspRI	CASTG	4 cut(s)	790, 805, 1020, 1549
Van91I	CCANNNNNTGG	1 cut(s)	269
VpaK11BI	GGWCC	1 cut(s)	1112
VspI	ATTAAT	1 cut(s)	1097
XapI	RAATTY	6 cut(s)	307, 543, 607, 855, 1821, 2234
XbaI	TCTAGA	2 cut(s)	1813, 1864
XceI	RCATGY	1 cut(s)	669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	833
XhoI	CTCGAG	1 cut(s)	1886
XmiI	GTMKAC	3 cut(s)	135, 699, 1571
XmnI	GAANNNNTTC	2 cut(s)	1961, 2072
XspI	CTAG	9 cut(s)	225, 507, 771, 908, 1185, 1263, 1785, 1814, 1865

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.