Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0005321

Physical Location & Seq

Genomic Coordinates Forward (+)

61392194 .. 61399291

Gene Structure 7098 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG385800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGCTTCCCCCGCCGTCACCGAGCCTAATCTCCACAGAAACCTCCACCTCCTCTCCGCCGAACAGGTGGAGCTGGCCAAGGTGCTGGTGGAGATGGGGCAGACTCATCTGTTCGAGCATTGGGCCGAGCCGGACGTCGACGATGACGAAAAGATAGCCTTTTTTGATCAGGTGAGTCGGCTCAATTCAAGCTATCCAGGGGGTTTGGCATCATATATCAAAACTGCTAGAGAACTGTTAGCGGATTCAAAAGCCGGAAAGAATCCATTTGATGGCTTTACACCTTCCGTTCCAACAGGTGAAACCTTGACTTTTGGTGATGATAGCTTTATGAGTTTTGAGGAGACTGGTGTCAAAGAAGTTCGGAAAGCTGCATTTGTTCTTGTTGCTGGAGGACTTGGGGAACGTCTGGGATACAACGGAATTAAGGTTGCTCTTCCCAGAGAGACGACTACAGGAGCGTGTTTTTTACAACATTATATCGAGACAATATTGGCTCTTCAAGATGCTAGCTGTGAACTCGCAGAAGGTGAATGCCAAACAAAAATTCCTCTGGTTATAATGACATCAGATGACACACATTCTCGTACAGTAGAGCTTTTAGAGTCAAATTCTTATTTTGGAATGGAACCTAATCAAGTAAAGCTTTTAAAGCAGGAAAAAGTTGCATGCTTAGATGATAATGATGCGAGGCTTGCAATAGACCCACGTAACAAGTACAGGATTCAGACCAAACCTCATGGACATGGTGATGTGCATTCACTACTCTACTCTAGTGGCCTCCTCACTGAATGGCGTGACGCTGGTTTAAGTTGGGTTCTGTTCTTCCAAGATACAAATGGACTTCTGTTCAATGCAATTCCAGCATCATTGGGTGTTAGTGCTACAAGACAGTACCATGTTAACTCCCTAGCTGTTCCGCGCAAAGCAAAAGAAGCAATTGGAGGAATTACCCGACTTACTCATGCTGATGGGAGATCAATGGTGATCAATGTGGAGTACAACCAGCTTGATCCACTGCTTAGAGCAACTGGATTTCCTGACGGTGATGTCAACAGTGAGACTGGCTATTCTCCTTTCCCTGGGAACATCAACCAATTAATCTTGGAACTTGGTCCGTACATTGAGGAGCTCACAAAAACAGGAGGTGCCATACAGGAGTTTGTTAACCCAAAATACAAAGATGCTAGTAAGACTTCATTTAAGTCCTCAACTCGGTTAGAGTGTATGATGCAAGACTATCCAAAAACTTTGCCTCCATCTGCTAGGGTGGGATTCACAGTAATGGAGCCATGGCTTGCTTATGCACCTGTTAAGAACAACCCTGAGGATGCTGCTAAGGTACCAAAGGGAAATCCATATCATAGTGCAACTTCTGGAGAAATGTTGGTTTATCGTGCAAACAGTCTCATTCTCAGAGAGGCTGGAGTCCAAGTAGCTGATCCAGTACAACAGGTGTTCAACGGTCAAGAAATTGAAGTGTGGCCTCGTGTCACATGGAAACCAAAATGGGCGGTCACTTTTAAAGAAGTAAAAAACAAAGTCAGTGGAAGTAGCTCAATTTCTCAGAGGTCTACATTGGTTATTAAGGGCCGTAATATATTTGTCAAGGATCTCTGCTTGGATGGGGCACTTGTTATCGATGTTGCTGATGTTAAAGAGGTAAAAGTGGAAGGTTCGGTACAGAATAAAGGCTGGATCCTTGAAAATGTTGATTACAAAGATACTTCAGTACCTGAGGAACTGAGGATAAGGGGTTTCAGAATCAACAAGATTGAACAATTGGTAAAGTCTGAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003983 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006011 GO:0006082 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009555 GO:0009987 GO:0010035 GO:0010038 GO:0010491 GO:0016740 GO:0016772 GO:0016779 GO:0017103 GO:0018130 GO:0019438 GO:0019752 GO:0032501 GO:0032502 GO:0033356 GO:0034641 GO:0034654 GO:0042221 GO:0042995 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046398 GO:0046483 GO:0046686 GO:0047338 GO:0047350 GO:0048229 GO:0048856 GO:0050896 GO:0051748 GO:0052573 GO:0055086 GO:0070569 GO:0071704 GO:0090406 GO:0120025 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko00052 ko00053 ko00520 ko01100 ko01130 map00040 map00052 map00053 map00520 map01100 map01130

Pfam Domains

Protein Families

UDPGP

Protein Analysis

600

Amino Acids

66.35

Weight (kDa)

5.49

Isoelectric Point (pI)

36.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGP	PF01704	114 - 273	9e-16	UTP--glucose-1-phosphate uridylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52560
fragaria_vesca	FvH4_2g28000 FvH4_2g28000
malus_domestica	MD15G1133100.v1.1
prunus_persica	Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1 Prupe.1G488700_v2.0.a1
pyrus_communis	pycom15g12000
rosa_chinensis	RchiOBHm_Chr6g0296821
rosa_laevigata	RLG00000011655
rosa_multiflora	Rmu_sc0009497.1_g000007
rosa_roxburghii	Rroxscaffold_176G00431360 Rroxscaffold_7G00171130 Rroxscaffold_7G00203680 Rroxscaffold_7G00203690
rosa_rugosa	Rorug04G0447400 Rorug04G0447500 Rorug04G0447600 Rorug04G0447600 Rorug04G0447600 Rorug04G0447700 Rorug04G0447800 Rorug06G0266800
rosa_samantha	Rh5BG073600 Rh6BG385800 Rh6DG378100
rosa_wichuraiana	Rw6G033000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	560
AasI	GACNNNNNNGTC	1 cut(s)	1049
AatII	GACGTC	1 cut(s)	138
Acc65I	GGTACC	1 cut(s)	1342
AccB1I	GGYRCC	2 cut(s)	1148, 1342
AccB7I	CCANNNNNTGG	1 cut(s)	272
AccI	GTMKAC	2 cut(s)	138, 1574
AccII	CGCG	1 cut(s)	922
AciI	CCGC	5 cut(s)	12, 57, 242, 920, 1514
AclWI	GGATC	5 cut(s)	1007, 1436, 1620, 1693, 1706
AcoI	YGGCCR	1 cut(s)	75
AcsI	RAATTY	2 cut(s)	546, 610
AcuI	CTGAAG	1 cut(s)	1713
AcyI	GRCGYC	1 cut(s)	135
AfaI	GTAC	9 cut(s)	589, 719, 896, 1001, 1121, 1344, 1449, 1683, 1734
AfiI	CCNNNNNNNGG	3 cut(s)	272, 1082, 1215
AgsI	TTSAA	8 cut(s)	189, 249, 503, 853, 1462, 1478, 1706, 1778
AjnI	CCWGG	2 cut(s)	196, 1081
AjuI	GAANNNNNNNTTGG	2 cut(s)	531, 563
Alw21I	GWGCWC	1 cut(s)	1134
Alw26I	GTCTC	5 cut(s)	338, 440, 479, 1055, 1412
AlwI	GGATC	5 cut(s)	1007, 1436, 1620, 1693, 1706
AlwNI	CAGNNNCTG	1 cut(s)	1736
AoxI	GGCC	5 cut(s)	75, 123, 778, 1484, 1591
ApeKI	GCWGC	2 cut(s)	371, 1334
ApoI	RAATTY	2 cut(s)	546, 610
AseI	ATTAAT	1 cut(s)	1100
Asp718I	GGTACC	1 cut(s)	1342
AspLEI	GCGC	1 cut(s)	924
AspS9I	GGNCC	3 cut(s)	123, 1115, 1591
AsuHPI	GGTGA	8 cut(s)	10, 184, 311, 329, 542, 761, 997, 1058
AsuNHI	GCTAGC	1 cut(s)	509
AvaII	GGWCC	1 cut(s)	1115
AxyI	CCTNAGG	2 cut(s)	1326, 1737
BaeGI	GKGCMC	1 cut(s)	1633
BaeI	ACNNNNGTAYC	4 cut(s)	1716, 1716, 1749, 1749
BalI	TGGCCA	1 cut(s)	77
BamHI	GGATCC	1 cut(s)	1698
BanI	GGYRCC	2 cut(s)	1148, 1342
BanII	GRGCYC	1 cut(s)	1134
BarI	GAAGNNNNNNTAC	2 cut(s)	1665, 1697
BauI	CACGAG	1 cut(s)	1488
Bbv12I	GWGCWC	1 cut(s)	1134
BbvI	GCAGC	2 cut(s)	358, 1321
BccI	CCATC	5 cut(s)	88, 266, 965, 1267, 1619
BceAI	ACGGC	1 cut(s)	1578
BciT130I	CCWGG	2 cut(s)	198, 1083
BciVI	GTATCC	1 cut(s)	407
BclI	TGATCA	2 cut(s)	166, 987
BcoDI	GTCTC	5 cut(s)	338, 440, 479, 1055, 1412
BfaI	CTAG	6 cut(s)	228, 510, 774, 911, 1188, 1266
BfmI	CTRYAG	1 cut(s)	453
BfuI	GTATCC	1 cut(s)	407
BisI	GCNGC	2 cut(s)	372, 1335
BlsI	GCNGC	2 cut(s)	373, 1336
Bme1390I	CCNGG	2 cut(s)	198, 1083
Bme18I	GGWCC	1 cut(s)	1115
BmgT120I	GGNCC	3 cut(s)	123, 1115, 1591
BmiI	GGNNCC	5 cut(s)	630, 1150, 1290, 1344, 1700
BmrFI	CCNGG	2 cut(s)	198, 1083
BmsI	GCATC	7 cut(s)	218, 496, 676, 875, 1174, 1221, 1321
BmtI	GCTAGC	1 cut(s)	513
BoxI	GACNNNNGTC	1 cut(s)	350
BpmI	CTGGAG	3 cut(s)	411, 1398, 1446
Bpu10I	CCTNAGC	1 cut(s)	1338
Bsa29I	ATCGAT	1 cut(s)	1641
BsaAI	YACGTR	1 cut(s)	710
BsaHI	GRCGYC	1 cut(s)	135
BsaJI	CCNNGG	5 cut(s)	78, 197, 1081, 1082, 1292
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 1240, 1270, 1419, 1449
Bsc4I	CCNNNNNNNGG	3 cut(s)	272, 1082, 1215
Bse1I	ACTGG	4 cut(s)	352, 1036, 1069, 1445
Bse21I	CCTNAGG	2 cut(s)	1326, 1737
BseBI	CCWGG	2 cut(s)	198, 1083
BseCI	ATCGAT	1 cut(s)	1641
BseDI	CCNNGG	5 cut(s)	78, 197, 1081, 1082, 1292
BseGI	GGATG	2 cut(s)	1336, 1630
BseLI	CCNNNNNNNGG	3 cut(s)	272, 1082, 1215
BseMII	CTCAG	6 cut(s)	1317, 1429, 1580, 1728, 1736, 1785
BseNI	ACTGG	4 cut(s)	352, 1036, 1069, 1445
BseRI	GAGGAG	4 cut(s)	41, 356, 773, 1142
BseSI	GKGCMC	1 cut(s)	1633
BseXI	GCAGC	2 cut(s)	358, 1321
Bsh1236I	CGCG	1 cut(s)	922
BshFI	GGCC	5 cut(s)	77, 125, 780, 1486, 1593
BshNI	GGYRCC	2 cut(s)	1148, 1342
BshVI	ATCGAT	1 cut(s)	1641
BsiHKAI	GWGCWC	1 cut(s)	1134
BsiSI	CCGG	2 cut(s)	131, 255
BslI	CCNNNNNNNGG	3 cut(s)	272, 1082, 1215
BsmAI	GTCTC	5 cut(s)	338, 440, 479, 1055, 1412
BsmBI	CGTCTC	1 cut(s)	440
BsmI	GAATGC	2 cut(s)	539, 757
BsnI	GGCC	5 cut(s)	77, 125, 780, 1486, 1593
Bsp1286I	GDGCHC	2 cut(s)	1134, 1633
Bsp143I	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
Bsp19I	CCATGG	1 cut(s)	1292
BspACI	CCGC	5 cut(s)	12, 57, 242, 920, 1514
BspANI	GGCC	5 cut(s)	77, 125, 780, 1486, 1593
BspCNI	CTCAG	6 cut(s)	1318, 1428, 1579, 1729, 1737, 1786
BspDI	ATCGAT	1 cut(s)	1641
BspFNI	CGCG	1 cut(s)	922
BspLI	GGNNCC	5 cut(s)	630, 1150, 1290, 1344, 1700
BspOI	GCTAGC	1 cut(s)	513
BspPI	GGATC	5 cut(s)	1007, 1436, 1620, 1693, 1706
BspQI	GCTCTTC	2 cut(s)	441, 504
BspT107I	GGYRCC	2 cut(s)	1148, 1342
BsrI	ACTGG	4 cut(s)	352, 1036, 1069, 1445
BssECI	CCNNGG	5 cut(s)	78, 197, 1081, 1082, 1292
BssMI	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
BssNI	GRCGYC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	1488
BssT1I	CCWWGG	2 cut(s)	78, 1292
Bst2BI	CACGAG	1 cut(s)	1488
Bst2UI	CCWGG	2 cut(s)	198, 1083
Bst4CI	ACNGT	8 cut(s)	237, 592, 894, 1046, 1058, 1282, 1406, 1466
Bst6I	CTCTTC	2 cut(s)	441, 504
BstACI	GRCGYC	1 cut(s)	135
BstBAI	YACGTR	1 cut(s)	710
BstC8I	GCNNGC	5 cut(s)	75, 511, 670, 696, 1299
BstDEI	CTNAG	9 cut(s)	673, 1022, 1326, 1338, 1415, 1566, 1737, 1745, 1794
BstDSI	CCRYGG	1 cut(s)	1292
BstF5I	GGATG	2 cut(s)	1336, 1630
BstFNI	CGCG	1 cut(s)	922
BstHHI	GCGC	1 cut(s)	924
BstKTI	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
BstMAI	GTCTC	5 cut(s)	338, 440, 479, 1055, 1412
BstMBI	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 652, 695, 863, 935
BstNI	CCWGG	2 cut(s)	198, 1083
BstNSI	RCATGY	1 cut(s)	672
BstPAI	GACNNNNGTC	1 cut(s)	350
BstSCI	CCNGG	2 cut(s)	196, 1081
BstSFI	CTRYAG	1 cut(s)	453
BstSLI	GKGCMC	1 cut(s)	1633
BstUI	CGCG	1 cut(s)	922
BstV1I	GCAGC	2 cut(s)	358, 1321
BstX2I	RGATCY	2 cut(s)	1612, 1698
BstXI	CCANNNNNNTGG	1 cut(s)	85
BstYI	RGATCY	2 cut(s)	1612, 1698
Bsu15I	ATCGAT	1 cut(s)	1641
Bsu36I	CCTNAGG	2 cut(s)	1326, 1737
BsuI	GTATCC	1 cut(s)	407
BsuRI	GGCC	5 cut(s)	77, 125, 780, 1486, 1593
BsuTUI	ATCGAT	1 cut(s)	1641
BtgI	CCRYGG	1 cut(s)	1292
BtsCI	GGATG	2 cut(s)	1336, 1630
BtsI	GCAGTG	1 cut(s)	1016
BtsIMutI	CAGTG	4 cut(s)	786, 1016, 1063, 1552
Cac8I	GCNNGC	5 cut(s)	75, 511, 670, 696, 1299
CaiI	CAGNNNCTG	1 cut(s)	1736
CfoI	GCGC	1 cut(s)	924
Cfr13I	GGNCC	3 cut(s)	123, 1115, 1591
ClaI	ATCGAT	1 cut(s)	1641
CseI	GACGC	1 cut(s)	809
Csp6I	GTAC	9 cut(s)	588, 718, 895, 1000, 1120, 1343, 1448, 1682, 1733
CspCI	CAANNNNNGTGG	2 cut(s)	1528, 1563
CviAII	CATG	7 cut(s)	669, 740, 746, 899, 965, 1293, 1497
CviQI	GTAC	9 cut(s)	588, 718, 895, 1000, 1120, 1343, 1448, 1682, 1733
DdeI	CTNAG	9 cut(s)	673, 1022, 1326, 1338, 1415, 1566, 1737, 1745, 1794
DpnI	GATC	7 cut(s)	168, 979, 989, 1014, 1443, 1614, 1700
DpnII	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
DraI	TTTAAA	2 cut(s)	651, 1525
DrdI	GACNNNNNNGTC	1 cut(s)	1049
DseDI	GACNNNNNNGTC	1 cut(s)	1049
EaeI	YGGCCR	1 cut(s)	75
Eam1104I	CTCTTC	2 cut(s)	441, 504
EarI	CTCTTC	2 cut(s)	441, 504
EciI	GGCGGA	1 cut(s)	46
Ecl136II	GAGCTC	1 cut(s)	1132
Eco130I	CCWWGG	2 cut(s)	78, 1292
Eco24I	GRGCYC	1 cut(s)	1134
Eco47I	GGWCC	1 cut(s)	1115
Eco53kI	GAGCTC	1 cut(s)	1132
Eco57I	CTGAAG	1 cut(s)	1713
Eco81I	CCTNAGG	2 cut(s)	1326, 1737
EcoICRI	GAGCTC	1 cut(s)	1132
EcoRII	CCWGG	2 cut(s)	196, 1081
EcoT14I	CCWWGG	2 cut(s)	78, 1292
EcoT38I	GRGCYC	1 cut(s)	1134
ErhI	CCWWGG	2 cut(s)	78, 1292
Esp3I	CGTCTC	1 cut(s)	440
FaeI	CATG	7 cut(s)	672, 743, 749, 902, 968, 1296, 1500
FalI	AAGNNNNNCTT	4 cut(s)	143, 175, 630, 662
FatI	CATG	7 cut(s)	668, 739, 745, 898, 964, 1292, 1496
FauI	CCCGC	1 cut(s)	19
FbaI	TGATCA	2 cut(s)	166, 987
FblI	GTMKAC	2 cut(s)	138, 1574
Fnu4HI	GCNGC	2 cut(s)	372, 1335
FokI	GGATG	2 cut(s)	1343, 1637
FriOI	GRGCYC	1 cut(s)	1134
Fsp4HI	GCNGC	2 cut(s)	372, 1335
FspBI	CTAG	6 cut(s)	228, 510, 774, 911, 1188, 1266
GlaI	GCGC	1 cut(s)	923
GluI	GCNGC	2 cut(s)	372, 1335
GsuI	CTGGAG	3 cut(s)	411, 1398, 1446
HaeIII	GGCC	5 cut(s)	77, 125, 780, 1486, 1593
HapII	CCGG	2 cut(s)	131, 255
HgaI	GACGC	1 cut(s)	809
HhaI	GCGC	1 cut(s)	924
Hin1I	GRCGYC	1 cut(s)	135
Hin1II	CATG	7 cut(s)	672, 743, 749, 902, 968, 1296, 1500
Hin6I	GCGC	1 cut(s)	922
HinP1I	GCGC	1 cut(s)	922
HincII	GTYRAC	4 cut(s)	139, 904, 1054, 1168
HindII	GTYRAC	4 cut(s)	139, 904, 1054, 1168
HindIII	AAGCTT	1 cut(s)	644
HinfI	GANTC	9 cut(s)	103, 175, 245, 262, 605, 724, 1275, 1428, 1764
HpaI	GTTAAC	2 cut(s)	904, 1168
HpaII	CCGG	2 cut(s)	131, 255
HphI	GGTGA	8 cut(s)	10, 184, 311, 329, 542, 761, 997, 1058
Hpy166II	GTNNAC	6 cut(s)	139, 518, 904, 1054, 1168, 1575
Hpy188I	TCNGA	7 cut(s)	366, 571, 729, 1418, 1569, 1763, 1795
Hpy188III	TCNNGA	5 cut(s)	484, 503, 1040, 1377, 1469
Hpy8I	GTNNAC	6 cut(s)	139, 518, 904, 1054, 1168, 1575
Hpy99I	CGWCG	2 cut(s)	140, 143
HpyAV	CCTTC	3 cut(s)	294, 521, 1667
HpyCH4III	ACNGT	8 cut(s)	237, 592, 894, 1046, 1058, 1282, 1406, 1466
HpyCH4IV	ACGT	3 cut(s)	135, 406, 709
HpyCH4V	TGCA	9 cut(s)	374, 668, 698, 757, 857, 1234, 1307, 1370, 1400
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 652, 695, 863, 935
HpyF3I	CTNAG	9 cut(s)	673, 1022, 1326, 1338, 1415, 1566, 1737, 1745, 1794
HpySE526I	ACGT	3 cut(s)	135, 406, 709
Hsp92I	GRCGYC	1 cut(s)	135
Hsp92II	CATG	7 cut(s)	672, 743, 749, 902, 968, 1296, 1500
HspAI	GCGC	1 cut(s)	922
KpnI	GGTACC	1 cut(s)	1346
Ksp22I	TGATCA	2 cut(s)	166, 987
KspAI	GTTAAC	2 cut(s)	904, 1168
Kzo9I	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
LguI	GCTCTTC	2 cut(s)	441, 504
LmnI	GCTCC	4 cut(s)	70, 458, 1129, 1288
Lsp1109I	GCAGC	2 cut(s)	358, 1321
LweI	GCATC	7 cut(s)	218, 496, 676, 875, 1174, 1221, 1321
MaeI	CTAG	6 cut(s)	228, 510, 774, 911, 1188, 1266
MaeII	ACGT	3 cut(s)	135, 406, 709
MaeIII	GTNAC	5 cut(s)	16, 710, 797, 1492, 1516
MalI	GATC	7 cut(s)	168, 979, 989, 1014, 1443, 1614, 1700
MboI	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
MboII	GAAGA	3 cut(s)	428, 491, 817
MfeI	CAATTG	2 cut(s)	939, 1781
MflI	RGATCY	2 cut(s)	1612, 1698
MhlI	GDGCHC	2 cut(s)	1134, 1633
MlsI	TGGCCA	1 cut(s)	77
MluNI	TGGCCA	1 cut(s)	77
MlyI	GAGTC	4 cut(s)	97, 184, 614, 1437
MmeI	TCCRAC	1 cut(s)	317
Mox20I	TGGCCA	1 cut(s)	77
MscI	TGGCCA	1 cut(s)	77
MslI	CAYNNNNRTG	4 cut(s)	744, 750, 969, 1283
Msp20I	TGGCCA	1 cut(s)	77
MspI	CCGG	2 cut(s)	131, 255
MspR9I	CCNGG	2 cut(s)	198, 1083
MunI	CAATTG	2 cut(s)	939, 1781
Mva1269I	GAATGC	2 cut(s)	539, 757
MvaI	CCWGG	2 cut(s)	198, 1083
MvnI	CGCG	1 cut(s)	922
MwoI	GCNNNNNNNGC	5 cut(s)	11, 652, 695, 863, 935
NcoI	CCATGG	1 cut(s)	1292
NdeII	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
NheI	GCTAGC	1 cut(s)	509
NlaIII	CATG	7 cut(s)	672, 743, 749, 902, 968, 1296, 1500
NlaIV	GGNNCC	5 cut(s)	630, 1150, 1290, 1344, 1700
NmeAIII	GCCGAG	1 cut(s)	151
NmuCI	GTSAC	4 cut(s)	16, 797, 1492, 1516
NspI	RCATGY	1 cut(s)	672
PaeI	GCATGC	1 cut(s)	672
PasI	CCCWGGG	1 cut(s)	1082
PciSI	GCTCTTC	2 cut(s)	441, 504
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	2 cut(s)	539, 757
PfeI	GAWTC	5 cut(s)	245, 262, 724, 1275, 1764
PflMI	CCANNNNNTGG	1 cut(s)	272
PkrI	GCNGC	2 cut(s)	373, 1336
PleI	GAGTC	4 cut(s)	97, 183, 613, 1436
PpsI	GAGTC	4 cut(s)	97, 183, 613, 1436
Ppu21I	YACGTR	1 cut(s)	710
PshAI	GACNNNNGTC	1 cut(s)	350
PshBI	ATTAAT	1 cut(s)	1100
PsiI	TTATAA	1 cut(s)	560
Psp124BI	GAGCTC	1 cut(s)	1134
Psp6I	CCWGG	2 cut(s)	196, 1081
PspGI	CCWGG	2 cut(s)	196, 1081
PspN4I	GGNNCC	5 cut(s)	630, 1150, 1290, 1344, 1700
PspPI	GGNCC	3 cut(s)	123, 1115, 1591
PstNI	CAGNNNCTG	1 cut(s)	1736
PsuI	RGATCY	2 cut(s)	1612, 1698
RsaI	GTAC	9 cut(s)	589, 719, 896, 1001, 1121, 1344, 1449, 1683, 1734
RsaNI	GTAC	9 cut(s)	588, 718, 895, 1000, 1120, 1343, 1448, 1682, 1733
RseI	CAYNNNNRTG	4 cut(s)	744, 750, 969, 1283
SacI	GAGCTC	1 cut(s)	1134
SalI	GTCGAC	1 cut(s)	137
SapI	GCTCTTC	2 cut(s)	441, 504
SatI	GCNGC	2 cut(s)	372, 1335
Sau3AI	GATC	7 cut(s)	166, 977, 987, 1012, 1441, 1612, 1698
Sau96I	GGNCC	3 cut(s)	123, 1115, 1591
SchI	GAGTC	4 cut(s)	97, 184, 614, 1437
ScrFI	CCNGG	2 cut(s)	198, 1083
SduI	GDGCHC	2 cut(s)	1134, 1633
SfaNI	GCATC	7 cut(s)	218, 496, 676, 875, 1174, 1221, 1321
SfcI	CTRYAG	1 cut(s)	453
SgrDI	CGTCGACG	1 cut(s)	137
SinI	GGWCC	1 cut(s)	1115
SmiMI	CAYNNNNRTG	4 cut(s)	744, 750, 969, 1283
SphI	GCATGC	1 cut(s)	672
SsiI	CCGC	5 cut(s)	12, 57, 242, 920, 1514
SspI	AATATT	1 cut(s)	492
SspMI	CTAG	6 cut(s)	228, 510, 774, 911, 1188, 1266
SstI	GAGCTC	1 cut(s)	1134
StyD4I	CCNGG	2 cut(s)	196, 1081
StyI	CCWWGG	2 cut(s)	78, 1292
TaaI	ACNGT	8 cut(s)	237, 592, 894, 1046, 1058, 1282, 1406, 1466
TaiI	ACGT	3 cut(s)	138, 409, 712
TaqI	TCGA	4 cut(s)	114, 138, 483, 1641
TatI	WGTACW	3 cut(s)	717, 999, 1447
TfiI	GAWTC	5 cut(s)	245, 262, 724, 1275, 1764
TscAI	CASTG	4 cut(s)	793, 1023, 1063, 1552
TseFI	GTSAC	4 cut(s)	16, 797, 1492, 1516
TseI	GCWGC	2 cut(s)	371, 1334
Tsp45I	GTSAC	4 cut(s)	16, 797, 1492, 1516
TspDTI	ATGAA	1 cut(s)	1188
TspGWI	ACGGA	3 cut(s)	277, 435, 1107
TspRI	CASTG	4 cut(s)	793, 1023, 1063, 1552
Van91I	CCANNNNNTGG	1 cut(s)	272
VpaK11BI	GGWCC	1 cut(s)	1115
VspI	ATTAAT	1 cut(s)	1100
XapI	RAATTY	2 cut(s)	546, 610
XceI	RCATGY	1 cut(s)	672
XcmI	CCANNNNNNNNNTGG	2 cut(s)	85, 836
XmiI	GTMKAC	2 cut(s)	138, 1574
XspI	CTAG	6 cut(s)	228, 510, 774, 911, 1188, 1266
ZraI	GACGTC	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.