RchiOBHm_Chr7g0185451
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0004278
Physical Location & Seq
Forward (+)
5586367 .. 5588106
1740 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16550

Sequence Viewer

Length: 1098 bp
ATGACTCATTCTCAACCCACTGGGTTAGCTGTGCCGGATGCTACTATGCACCCTGTCAAATCAACCTCAGATGTCATTAAATTAATGGATATAGGATTTAAGAACCGAGCTGTTAGTGCCACTGCCCTCAACGAAAGAAGTAGTCGCTCTCATAGTGTTCTTACAGTTCATGTACGAGGGACGGATCTGAAGACTAGTTCTGCTTTGGTCGGCAATCTTCATCTTGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAGGTTACTGGAGATAGACTTAAGGAAGCACAACATATAAACAAATCATTATCTTCACTTGGAGATGTCATATTTGCTCTTGCACAGAAGAGCCCTCATGTACCATACAGAAATAGCAAGCTTACTCAAGTCCTTCAAAGCTCTCTCGGTGGACAAGCAAAAACACTTATGTTTGTGCAGCTTAATCCTGAAACAAGTTCATATTCTGAAAGTTTAAGTACTCTAAAGTTTGCTGAGAGGGTTGCTGGAGTAGAGCTAGGGGCGGCAAAAAGCAACAAAGAGGGCAGGGATGCTAGGGAGTTGATGGAACAGGTGGCAATTCTCAAAGACACTATATCGAAGAAGGATAATGAGATAGAACGACTGCATTTACTTAAAGATATCCGAGTGGAGAAGCGTCGGACAGGCTCGTTAAGTTCTGAAACTGATTCCCAGCAGTCCATGCATGACCTTAAACACCAAAATAATACACTCCGGCGATCAAAGGTTGCCGGAGGTGACATAGGTCAGAATAATTCTGCGGATGCTGAGATGTTAGGATTTGGAGAGGCAGATTATGAGGAGAAATTAAGTGACTTATCTGACGGTGGTCTTTCTGGTGGAACAGAAACTGATGGCTCTGCCTCTGCTGACAGTACGAGCTATTCTGAAAGCACAAAATCAGATAGCTTAGAAAAGCCGAGAGGGGTTACTAGGATTCCCCGACCTTGGTCAAAACCAGCAGTAACTTCCTCATCTATGATGTTAGGATCAAAAAGCTCTCCGAAAGTTTCATCAGGTCTAAAAAAAAGTAGCAGCTCTTCCTCACTGAAACCAGCTTCTAAACGATGGCAATAA

Protein Analysis

365

Amino Acids

39.31

Weight (kDa)

9.25

Isoelectric Point (pI)

45.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 4 - 169 3.5e-62 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 524, 782
AclWI GGATC 2 cut(s) 192, 1018
AcuI CTGAAG 1 cut(s) 209
AfaI GTAC 4 cut(s) 174, 363, 481, 898
AfiI CCNNNNNNNGG 1 cut(s) 969
AflII CTTAAG 1 cut(s) 281
AgsI TTSAA 1 cut(s) 398
AhlI ACTAGT 1 cut(s) 194
AlwI GGATC 2 cut(s) 192, 1018
AlwNI CAGNNNCTG 1 cut(s) 872
ApeKI GCWGC 2 cut(s) 439, 1056
AseI ATTAAT 1 cut(s) 83
AsuHPI GGTGA 1 cut(s) 770
BanII GRGCYC 1 cut(s) 356
BarI GAAGNNNNNNTAC 2 cut(s) 1045, 1077
BbsI GAAGAC 1 cut(s) 197
BbvI GCAGC 2 cut(s) 451, 1068
BccI CCATC 3 cut(s) 559, 869, 1083
BcuI ACTAGT 1 cut(s) 194
BfaI CTAG 4 cut(s) 195, 518, 555, 954
BfrI CTTAAG 1 cut(s) 281
BisI GCNGC 3 cut(s) 440, 525, 1057
BlsI GCNGC 3 cut(s) 441, 526, 1058
BmcAI AGTACT 1 cut(s) 481
BmrI ACTGGG 1 cut(s) 30
BmsI GCATC 3 cut(s) 28, 541, 775
BmuI ACTGGG 1 cut(s) 30
BoxI GACNNNNGTC 3 cut(s) 765, 849, 970
BpiI GAAGAC 1 cut(s) 197
BpmI CTGGAG 2 cut(s) 291, 528
BpuEI CTTGAG 1 cut(s) 372
BsaJI CCNNGG 1 cut(s) 968
Bsc4I CCNNNNNNNGG 1 cut(s) 969
Bse1I ACTGG 2 cut(s) 25, 274
BseDI CCNNGG 1 cut(s) 968
BseGI GGATG 3 cut(s) 43, 556, 790
BseLI CCNNNNNNNGG 1 cut(s) 969
BseMII CTCAG 4 cut(s) 81, 252, 486, 780
BseNI ACTGG 2 cut(s) 25, 274
BseRI GAGGAG 1 cut(s) 836
BseXI GCAGC 2 cut(s) 451, 1068
BseYI CCCAGC 1 cut(s) 693
BsgI GTGCAG 1 cut(s) 458
BsiSI CCGG 3 cut(s) 35, 736, 753
BslFI GGGAC 1 cut(s) 193
BslI CCNNNNNNNGG 1 cut(s) 969
BsmFI GGGAC 1 cut(s) 193
Bsp1286I GDGCHC 1 cut(s) 356
Bsp143I GATC 4 cut(s) 184, 253, 740, 1010
BspACI CCGC 2 cut(s) 524, 782
BspCNI CTCAG 4 cut(s) 80, 253, 487, 781
BspPI GGATC 2 cut(s) 192, 1018
BspQI GCTCTTC 2 cut(s) 344, 1066
BspTI CTTAAG 1 cut(s) 281
BsrI ACTGG 2 cut(s) 25, 274
BssECI CCNNGG 1 cut(s) 968
BssMI GATC 4 cut(s) 184, 253, 740, 1010
BssT1I CCWWGG 1 cut(s) 968
Bst4CI ACNGT 3 cut(s) 166, 848, 896
Bst6I CTCTTC 2 cut(s) 344, 1066
BstAFI CTTAAG 1 cut(s) 281
BstAPI GCANNNNNTGC 1 cut(s) 703
BstC8I GCNNGC 1 cut(s) 380
BstDEI CTNAG 5 cut(s) 67, 261, 495, 789, 931
BstF5I GGATG 3 cut(s) 43, 556, 790
BstKTI GATC 4 cut(s) 187, 256, 743, 1013
BstMBI GATC 4 cut(s) 184, 253, 740, 1010
BstMWI GCNNNNNNNGC 2 cut(s) 116, 703
BstPAI GACNNNNGTC 3 cut(s) 765, 849, 970
BstV1I GCAGC 2 cut(s) 451, 1068
BstV2I GAAGAC 1 cut(s) 197
BstX2I RGATCY 1 cut(s) 184
BstYI RGATCY 1 cut(s) 184
BtsCI GGATG 3 cut(s) 43, 556, 790
BtsI GCAGTG 1 cut(s) 120
BtsIMutI CAGTG 3 cut(s) 18, 120, 1067
Cac8I GCNNGC 1 cut(s) 380
CaiI CAGNNNCTG 1 cut(s) 872
CseI GACGC 1 cut(s) 647
Csp6I GTAC 4 cut(s) 173, 362, 480, 897
CviAII CATG 4 cut(s) 170, 359, 703, 707
CviQI GTAC 4 cut(s) 173, 362, 480, 897
DdeI CTNAG 5 cut(s) 67, 261, 495, 789, 931
DpnI GATC 4 cut(s) 186, 255, 742, 1012
DpnII GATC 4 cut(s) 184, 253, 740, 1010
Eam1104I CTCTTC 2 cut(s) 344, 1066
EarI CTCTTC 2 cut(s) 344, 1066
Eco130I CCWWGG 1 cut(s) 968
Eco24I GRGCYC 1 cut(s) 356
Eco32I GATATC 1 cut(s) 643
Eco57I CTGAAG 1 cut(s) 209
EcoRV GATATC 1 cut(s) 643
EcoT14I CCWWGG 1 cut(s) 968
EcoT22I ATGCAT 1 cut(s) 708
EcoT38I GRGCYC 1 cut(s) 356
ErhI CCWWGG 1 cut(s) 968
FaeI CATG 4 cut(s) 173, 362, 706, 710
FaqI GGGAC 1 cut(s) 193
FatI CATG 4 cut(s) 169, 358, 702, 706
Fnu4HI GCNGC 3 cut(s) 440, 525, 1057
FokI GGATG 3 cut(s) 50, 563, 797
FriOI GRGCYC 1 cut(s) 356
Fsp4HI GCNGC 3 cut(s) 440, 525, 1057
FspBI CTAG 4 cut(s) 195, 518, 555, 954
GluI GCNGC 3 cut(s) 440, 525, 1057
GsaI CCCAGC 1 cut(s) 697
GsuI CTGGAG 2 cut(s) 291, 528
HapII CCGG 3 cut(s) 35, 736, 753
HgaI GACGC 1 cut(s) 647
Hin1II CATG 4 cut(s) 173, 362, 706, 710
HindIII AAGCTT 1 cut(s) 380
HinfI GANTC 3 cut(s) 4, 689, 958
HpaII CCGG 3 cut(s) 35, 736, 753
HphI GGTGA 1 cut(s) 770
Hpy166II GTNNAC 1 cut(s) 413
Hpy188III TCNNGA 1 cut(s) 449
Hpy8I GTNNAC 1 cut(s) 413
Hpy99I CGWCG 1 cut(s) 663
HpyAV CCTTC 2 cut(s) 404, 598
HpyCH4III ACNGT 3 cut(s) 166, 848, 896
HpyCH4V TGCA 5 cut(s) 49, 344, 439, 628, 706
HpyF10VI GCNNNNNNNGC 2 cut(s) 116, 703
HpyF3I CTNAG 5 cut(s) 67, 261, 495, 789, 931
Hsp92II CATG 4 cut(s) 173, 362, 706, 710
Kzo9I GATC 4 cut(s) 184, 253, 740, 1010
LguI GCTCTTC 2 cut(s) 344, 1066
Lsp1109I GCAGC 2 cut(s) 451, 1068
LweI GCATC 3 cut(s) 28, 541, 775
MaeI CTAG 4 cut(s) 195, 518, 555, 954
MaeIII GTNAC 5 cut(s) 265, 758, 833, 949, 985
MalI GATC 4 cut(s) 186, 255, 742, 1012
MboI GATC 4 cut(s) 184, 253, 740, 1010
MboII GAAGA 6 cut(s) 202, 209, 306, 361, 613, 1053
MflI RGATCY 1 cut(s) 184
MhlI GDGCHC 1 cut(s) 356
MluCI AATT 4 cut(s) 80, 579, 775, 827
MmeI TCCRAC 1 cut(s) 641
Mph1103I ATGCAT 1 cut(s) 708
MspCI CTTAAG 1 cut(s) 281
MspI CCGG 3 cut(s) 35, 736, 753
MwoI GCNNNNNNNGC 2 cut(s) 116, 703
NdeII GATC 4 cut(s) 184, 253, 740, 1010
NlaIII CATG 4 cut(s) 173, 362, 706, 710
NmeAIII GCCGAG 1 cut(s) 966
NmuCI GTSAC 2 cut(s) 758, 833
NsiI ATGCAT 1 cut(s) 708
PciSI GCTCTTC 2 cut(s) 344, 1066
PfeI GAWTC 2 cut(s) 689, 958
PkrI GCNGC 3 cut(s) 441, 526, 1058
PshAI GACNNNNGTC 3 cut(s) 765, 849, 970
PshBI ATTAAT 1 cut(s) 83
PspFI CCCAGC 1 cut(s) 693
PstNI CAGNNNCTG 1 cut(s) 872
PsuI RGATCY 1 cut(s) 184
RsaI GTAC 4 cut(s) 174, 363, 481, 898
RsaNI GTAC 4 cut(s) 173, 362, 480, 897
SapI GCTCTTC 2 cut(s) 344, 1066
SatI GCNGC 3 cut(s) 440, 525, 1057
Sau3AI GATC 4 cut(s) 184, 253, 740, 1010
ScaI AGTACT 1 cut(s) 481
SduI GDGCHC 1 cut(s) 356
SfaNI GCATC 3 cut(s) 28, 541, 775
SmlI CTYRAG 2 cut(s) 281, 387
SmoI CTYRAG 2 cut(s) 281, 387
SpeI ACTAGT 1 cut(s) 194
Sse9I AATT 4 cut(s) 80, 579, 775, 827
SsiI CCGC 2 cut(s) 524, 782
SspMI CTAG 4 cut(s) 195, 518, 555, 954
StyI CCWWGG 1 cut(s) 968
TaaI ACNGT 3 cut(s) 166, 848, 896
TaqI TCGA 1 cut(s) 599
TasI AATT 4 cut(s) 80, 579, 775, 827
TatI WGTACW 1 cut(s) 479
TauI GCSGC 1 cut(s) 527
TfiI GAWTC 2 cut(s) 689, 958
TscAI CASTG 3 cut(s) 25, 127, 1074
TseFI GTSAC 2 cut(s) 758, 833
TseI GCWGC 2 cut(s) 439, 1056
Tsp45I GTSAC 2 cut(s) 758, 833
TspDTI ATGAA 4 cut(s) 158, 209, 450, 1023
TspGWI ACGGA 1 cut(s) 197
TspRI CASTG 3 cut(s) 25, 127, 1074
Vha464I CTTAAG 1 cut(s) 281
VspI ATTAAT 1 cut(s) 83
XspI CTAG 4 cut(s) 195, 518, 555, 954
ZrmI AGTACT 1 cut(s) 481
Zsp2I ATGCAT 1 cut(s) 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.