Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0004278

Physical Location & Seq

Genomic Coordinates Reverse (-)

5237186 .. 5243863

Gene Structure 6678 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG073500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGGATTCCTCTTCTGATAACCACAAAACTCAAAAGGGAGGAACCTCGACCTCAAGTGTTCCTGCTAATGGGGATATGTTTGGACGAGTTGTAAATGGTACTGGTGAGACTGAAGGCAAGCGGCTAGCGTTTTTAGTGGAGTGGTTAAATAGTATACTTCCTGATTTAGGTTTACCAGAAACTGCTTCAGATGAGGACTTGAGATCAGTATTGATTGATGGTACCATTTTATGTCGGCTATTGAACAGGCTTAGACCTTGTTCTGTTGATGAGGTTAATAGATCCGATCAGAACTCAGTGCCAAGCTCAGAAAATGTCGCAAGGTTCTTGGCTGCTGTTGATTCATTAGGCCTGCCCCAGTTTAATATGGCGGATCTAGAGAAGGGATCTATGAAGACTGTTATAGATTGTCTTTTAACACTTAGAACACGACTTGGGTCAAGTGTTGCAGCAGACGGTTTTTCTCTGTTTAGTCCAACTGGTAACTATGACAGCCCTCGAAGAGATTTATCTTCCCGTGGATTTAGTTCTCCGTTAACTGTAGAAGAGAGGCAGAAGGTCTTGTCTGAGTCAAAATTTCAACGTTCATTACGTAGTCCTGTTATGTCAGAGCCATCAGCAGGATTAATGCATCATGTTGGACATAAGTTCCATGAGGTATTTCAGGTGAAACAAGGACGCTACGCAGATCTTCCTGCTGCAAAGATCTCAGAAATGATGAAATCCAACAGTTTAGATAATGCTCCGACTCAGTCCCTTTTGAGCGTTGTAAATGGAATTCTTGACGAAAGCGTTGAAAGAAATAATAGTGAAATACCTCATCGTGTGGCTTGTCTACTGAGAAAAGTTGTCCAGGAAATTGAGCGCCGCATATCAACTCAAGCAGAGCATTTAAGAACTCAAAACAATCTTTTCAAGGCTCGCGAAGAGAAATACCAGTCAAGAATCAGAGTACTTGAAGCCCTTGCATCCGGAACCAATGAGGAAAGCGAGCTTTTTAGGAACCATCTTCAGCAAATGAAGAGTGAGAGGACCAAAATTGAAGAAAAAAGGAACACTGATGATGAGGATGTGATCAGATTGAAGAAAGAGAAGGAGCATAGTAACCTTCAAATTTCAGGACTGAAGCAAGAGTTGGATATAGCCAAAAAGACATATGACTTGCGTTGCTTGCAAATGGAAACAGACGCGAGAGGTGTTAAAGCAGCACTTGAAGAAAGGGTAAAAGACCTTGAACGCCTCTTGGCAGATTCAAGGAATAAGGTGAAAGAGCTGGAGGAAAACTCTGAGTCAAAACATCAGGTTTCTAACGAAACTTTAAAGCTTGAAGAAAAGGTAAAAGAACTTGAACGCCTCTTGGAAGCTTCAAGGAATAAAGTGAAAGAACTTGAGGAAAGCTCAGAGTCAAAATATCAGTTTTCCCAAGGTCAGCTTGAAGAGCGGGTGAAAGAACTTGAAAATCTCTTGGCAGATTCAAGGAAAAAGGAGAAAGAGCTTCAGGCAAATTCTGAGTCAAAATGTCAGAGTTGGATTAAGAAAGAGCGTGTTTACCATAACTTTATGGAATTTCAACTTGGTTCTTTGAAGGAATTGAGGCTATCTTCTGTGTCCATTAAGCAAGAAATAATGAAGGCAGAACGAAGCTACACGAGTGAATTTGATCATTTAGGAGTGAAGCTTCAAGCATTAGCAGATGCAGCCGAGAATTATCATTCACTTTTGGCTGAAAATAGGAGGCTGTTTAATGAAATTCAGGATTTAAAAGGAAACATCAGAGTATATTGCCGAATAAGACCATTTCTGCCTGGACAGAAGGAGAAAAGAACATTGGTAGAACATGTTGGTGACAATGGAGAACTGGTAGTTGCAGACCGCTCCAGACCAGGGAAAGATGGTCATCGATTGTTCAAGTTTAATAAGACTGGTCCTAACAATGCAACTAAGGAGAACTGGGGGGTCAACTATAGAGCCTTAAATGACCTTTTTGATGATTCTCAGCAAAGAAAAAGCTCCATTATGTATGAAATTGGTGTTCAAATGGTTGAAATATACAATGAACAAGTGCGCGATTTGTTATCAAGTGATGCTGTGCCGGATGCTACTATGCACCCTGTCAAATCAACCTCAGATGTCATTAAATTAATGGATATAGGATTTAAGAACCGAGCTGTTAGTGCCACTGCCCTCAACGAAAGAAGTAGTCGCTCTCATAGTGTTCTTACAGTTCATGTACGAGGGACGGATCTGAAGACTAGTTCTGCTTTGGTCGGCAATCTTCATCTTGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAGGTTACTGGAGATAGACTTAAGGAAGCACAACATATAAACAAATCATTATCTTCACTTGGAGATGTCATATTTGCTCTTGCACAGAAGAGCCCTCATGTACCATACAGAAATAGCAAGCTTACTCAAGTCCTTCAAAGCTCTCTCGGTGGACAAGCAAAAACACTTATGTTTGTGCAGCTTAATCCTGAAACAAGTTCATATTCTGAAAGTTTAAGTACTCTAAAGTTTGCTGAGAGGGTTGCTGGAGTAGAGCTAGGGGCGGCAAAAAGCAACAAAGAGGGCAGGGATGCTAGGGAGTTGATGGAACAGGTCCTCATTTTATACATCATTTCTTGCATCACAAGCAAATTGGGGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

893

Amino Acids

100.54

Weight (kDa)

7.09

Isoelectric Point (pI)

50.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	45 - 143	3.7e-12	Calponin homology (CH) domain
Microtub_bd	PF16796	576 - 655	6.3e-09	Microtubule binding
Kinesin	PF00225	647 - 855	1.4e-70	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18410 AT1G18410 AT1G18410 AT1G18410 AT1G18410 AT1G73860 AT1G73860
fragaria_vesca	FvH4_5g12130 FvH4_5g12130
malus_domestica	MD06G1216000.v1.1 MD14G1226600.v1.1
prunus_persica	Prupe.5G221200_v2.0.a1 Prupe.5G221200_v2.0.a1 Prupe.5G221200_v2.0.a1 Prupe.5G221200_v2.0.a1
pyrus_communis	pycom06g19260 pycom14g18800
rosa_chinensis	RchiOBHm_Chr7g0185441 RchiOBHm_Chr7g0185451
rosa_laevigata	RLG00000004912
rosa_multiflora	Rmu_sc0010190.1_g000028
rosa_roxburghii	Rroxscaffold_3G00268930
rosa_rugosa	Rorug06G0469100 Rorug06G0469200 Rorug06G0469300 Rorug06G0469400 Rorug06G0469500
rosa_samantha	Rh7AG073500 Rh7BG074100 Rh7CG074300 Rh7DG074200
rosa_wichuraiana	Rw7G006170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	221
AccB1I	GGYRCC	1 cut(s)	221
AccBSI	CCGCTC	2 cut(s)	1441, 1875
AccI	GTMKAC	2 cut(s)	154, 835
AccII	CGCG	3 cut(s)	924, 1190, 2067
AccIII	TCCGGA	1 cut(s)	971
AciI	CCGC	6 cut(s)	121, 371, 868, 1441, 1873, 2582
AclI	AACGTT	1 cut(s)	583
AclWI	GGATC	4 cut(s)	276, 381, 394, 2250
AcsI	RAATTY	7 cut(s)	575, 777, 1113, 1504, 1565, 1655, 1749
AcuI	CTGAAG	6 cut(s)	132, 171, 995, 1145, 1481, 2267
AfaI	GTAC	6 cut(s)	100, 223, 954, 2232, 2421, 2539
AfiI	CCNNNNNNNGG	4 cut(s)	68, 167, 620, 1884
AflII	CTTAAG	1 cut(s)	2339
AflIII	ACRYGT	1 cut(s)	1837
AhlI	ACTAGT	1 cut(s)	2252
AjnI	CCWGG	3 cut(s)	852, 1804, 1882
AjuI	GAANNNNNNNTTGG	6 cut(s)	1118, 1150, 1557, 1589, 1811, 1843
Alw26I	GTCTC	1 cut(s)	101
AlwI	GGATC	4 cut(s)	276, 381, 394, 2250
AlwNI	CAGNNNCTG	1 cut(s)	182
Aor13HI	TCCGGA	1 cut(s)	971
AoxI	GGCC	1 cut(s)	349
ApeKI	GCWGC	6 cut(s)	332, 449, 698, 1205, 1697, 2497
ApoI	RAATTY	7 cut(s)	575, 777, 1113, 1504, 1565, 1655, 1749
ArsI	GACNNNNNNTTYG	2 cut(s)	1496, 1528
AseI	ATTAAT	2 cut(s)	626, 2141
Asp718I	GGTACC	1 cut(s)	221
AspLEI	GCGC	2 cut(s)	867, 2067
AspS9I	GGNCC	3 cut(s)	1032, 1925, 2632
AsuHPI	GGTGA	5 cut(s)	116, 679, 1276, 1456, 1856
AsuNHI	GCTAGC	1 cut(s)	124
AvaII	GGWCC	3 cut(s)	1032, 1925, 2632
BanI	GGYRCC	1 cut(s)	221
BanII	GRGCYC	1 cut(s)	2414
BauI	CACGAG	1 cut(s)	1648
BbsI	GAAGAC	2 cut(s)	401, 2255
BbvI	GCAGC	6 cut(s)	319, 461, 685, 1217, 1709, 2509
BccI	CCATC	5 cut(s)	212, 622, 1014, 1886, 2617
BciT130I	CCWGG	3 cut(s)	854, 1806, 1884
BclI	TGATCA	2 cut(s)	1074, 1660
BcoDI	GTCTC	1 cut(s)	101
BcuI	ACTAGT	1 cut(s)	2252
BfaI	CTAG	5 cut(s)	125, 377, 2253, 2576, 2613
BfmI	CTRYAG	2 cut(s)	540, 1963
BfoI	RGCGCY	1 cut(s)	868
BfrI	CTTAAG	1 cut(s)	2339
BglII	AGATCT	2 cut(s)	688, 705
BisI	GCNGC	9 cut(s)	122, 333, 450, 699, 868, 1206, 1698, 2498, 2583
BlsI	GCNGC	9 cut(s)	123, 334, 451, 700, 869, 1207, 1699, 2499, 2584
BmcAI	AGTACT	2 cut(s)	954, 2539
Bme1390I	CCNGG	3 cut(s)	854, 1806, 1884
Bme18I	GGWCC	3 cut(s)	1032, 1925, 2632
BmgT120I	GGNCC	3 cut(s)	1032, 1925, 2632
BmiI	GGNNCC	4 cut(s)	43, 223, 976, 1004
BmrFI	CCNGG	3 cut(s)	854, 1806, 1884
BmrI	ACTGGG	2 cut(s)	352, 1960
BmsI	GCATC	7 cut(s)	640, 977, 1684, 2074, 2086, 2599, 2667
BmtI	GCTAGC	1 cut(s)	128
BmuI	ACTGGG	2 cut(s)	352, 1960
BoxI	GACNNNNGTC	1 cut(s)	436
BpiI	GAAGAC	2 cut(s)	401, 2255
BplI	GAGNNNNNCTC	4 cut(s)	1268, 1300, 1382, 1414
BpmI	CTGGAG	4 cut(s)	1295, 1861, 2349, 2586
BpuEI	CTTGAG	5 cut(s)	37, 220, 864, 1409, 2430
Bsa29I	ATCGAT	1 cut(s)	1900
BsaAI	YACGTR	1 cut(s)	593
BsaBI	GATNNNNATC	1 cut(s)	1896
BsaJI	CCNNGG	3 cut(s)	517, 1423, 1883
BsaWI	WCCGGW	1 cut(s)	971
BsaXI	ACNNNNNCTCC	2 cut(s)	1845, 1875
Bsc4I	CCNNNNNNNGG	4 cut(s)	68, 167, 620, 1884
Bse1I	ACTGG	8 cut(s)	106, 358, 484, 937, 1863, 1927, 1955, 2332
Bse8I	GATNNNNATC	1 cut(s)	1896
BseAI	TCCGGA	1 cut(s)	971
BseBI	CCWGG	3 cut(s)	854, 1806, 1884
BseCI	ATCGAT	1 cut(s)	1900
BseDI	CCNNGG	3 cut(s)	517, 1423, 1883
BseGI	GGATG	4 cut(s)	968, 1075, 2101, 2614
BseJI	GATNNNNATC	1 cut(s)	1896
BseLI	CCNNNNNNNGG	4 cut(s)	68, 167, 620, 1884
BseNI	ACTGG	8 cut(s)	106, 358, 484, 937, 1863, 1927, 1955, 2332
BseXI	GCAGC	6 cut(s)	319, 461, 685, 1217, 1709, 2509
BsgI	GTGCAG	1 cut(s)	2516
Bsh1236I	CGCG	3 cut(s)	924, 1190, 2067
BshFI	GGCC	1 cut(s)	351
BshNI	GGYRCC	1 cut(s)	221
BshVI	ATCGAT	1 cut(s)	1900
BsiSI	CCGG	2 cut(s)	972, 2093
BslFI	GGGAC	2 cut(s)	739, 2251
BslI	CCNNNNNNNGG	4 cut(s)	68, 167, 620, 1884
BsmAI	GTCTC	1 cut(s)	101
BsmFI	GGGAC	2 cut(s)	739, 2251
BsnI	GGCC	1 cut(s)	351
Bsp1286I	GDGCHC	1 cut(s)	2414
Bsp13I	TCCGGA	1 cut(s)	971
Bsp68I	TCGCGA	1 cut(s)	924
BspACI	CCGC	6 cut(s)	121, 371, 868, 1441, 1873, 2582
BspANI	GGCC	1 cut(s)	351
BspDI	ATCGAT	1 cut(s)	1900
BspEI	TCCGGA	1 cut(s)	971
BspFNI	CGCG	3 cut(s)	924, 1190, 2067
BspLI	GGNNCC	4 cut(s)	43, 223, 976, 1004
BspOI	GCTAGC	1 cut(s)	128
BspPI	GGATC	4 cut(s)	276, 381, 394, 2250
BspQI	GCTCTTC	2 cut(s)	1431, 2402
BspT107I	GGYRCC	1 cut(s)	221
BspTI	CTTAAG	1 cut(s)	2339
BsrBI	CCGCTC	2 cut(s)	1441, 1875
BsrI	ACTGG	8 cut(s)	106, 358, 484, 937, 1863, 1927, 1955, 2332
BssECI	CCNNGG	3 cut(s)	517, 1423, 1883
BssNAI	GTATAC	1 cut(s)	155
BssSI	CACGAG	1 cut(s)	1648
BssT1I	CCWWGG	1 cut(s)	1423
Bst1107I	GTATAC	1 cut(s)	155
Bst2BI	CACGAG	1 cut(s)	1648
Bst2UI	CCWGG	3 cut(s)	854, 1806, 1884
Bst4CI	ACNGT	5 cut(s)	400, 458, 541, 731, 2224
Bst6I	CTCTTC	7 cut(s)	16, 496, 540, 921, 1016, 1431, 2402
BstAFI	CTTAAG	1 cut(s)	2339
BstBAI	YACGTR	1 cut(s)	593
BstC8I	GCNNGC	7 cut(s)	119, 126, 353, 922, 992, 1172, 2438
BstDSI	CCRYGG	1 cut(s)	517
BstENI	CCTNNNNNAGG	1 cut(s)	165
BstF5I	GGATG	4 cut(s)	968, 1075, 2101, 2614
BstFNI	CGCG	3 cut(s)	924, 1190, 2067
BstH2I	RGCGCY	1 cut(s)	868
BstHHI	GCGC	2 cut(s)	867, 2067
BstMAI	GTCTC	1 cut(s)	101
BstMWI	GCNNNNNNNGC	5 cut(s)	1171, 1438, 1697, 2174, 2664
BstNI	CCWGG	3 cut(s)	854, 1806, 1884
BstNSI	RCATGY	1 cut(s)	1841
BstPAI	GACNNNNGTC	1 cut(s)	436
BstSCI	CCNGG	3 cut(s)	852, 1804, 1882
BstSFI	CTRYAG	2 cut(s)	540, 1963
BstSNI	TACGTA	1 cut(s)	593
BstUI	CGCG	3 cut(s)	924, 1190, 2067
BstV1I	GCAGC	6 cut(s)	319, 461, 685, 1217, 1709, 2509
BstV2I	GAAGAC	2 cut(s)	401, 2255
BstX2I	RGATCY	6 cut(s)	281, 373, 386, 688, 705, 2242
BstYI	RGATCY	6 cut(s)	281, 373, 386, 688, 705, 2242
BstZ17I	GTATAC	1 cut(s)	155
Bsu15I	ATCGAT	1 cut(s)	1900
BsuRI	GGCC	1 cut(s)	351
BsuTUI	ATCGAT	1 cut(s)	1900
BtgI	CCRYGG	1 cut(s)	517
BtsCI	GGATG	4 cut(s)	968, 1075, 2101, 2614
BtsI	GCAGTG	1 cut(s)	2178
BtsIMutI	CAGTG	3 cut(s)	303, 1056, 2178
BtuMI	TCGCGA	1 cut(s)	924
Cac8I	GCNNGC	7 cut(s)	119, 126, 353, 922, 992, 1172, 2438
CaiI	CAGNNNCTG	1 cut(s)	182
CfoI	GCGC	2 cut(s)	867, 2067
Cfr13I	GGNCC	3 cut(s)	1032, 1925, 2632
ClaI	ATCGAT	1 cut(s)	1900
CseI	GACGC	2 cut(s)	687, 1196
Csp6I	GTAC	6 cut(s)	99, 222, 953, 2231, 2420, 2538
CviAII	CATG	5 cut(s)	635, 653, 1838, 2228, 2417
CviQI	GTAC	6 cut(s)	99, 222, 953, 2231, 2420, 2538
DraI	TTTAAA	2 cut(s)	1320, 1761
Eam1104I	CTCTTC	7 cut(s)	16, 496, 540, 921, 1016, 1431, 2402
EarI	CTCTTC	7 cut(s)	16, 496, 540, 921, 1016, 1431, 2402
EciI	GGCGGA	1 cut(s)	386
Eco105I	TACGTA	1 cut(s)	593
Eco130I	CCWWGG	1 cut(s)	1423
Eco147I	AGGCCT	1 cut(s)	351
Eco24I	GRGCYC	1 cut(s)	2414
Eco47I	GGWCC	3 cut(s)	1032, 1925, 2632
Eco57I	CTGAAG	6 cut(s)	132, 171, 995, 1145, 1481, 2267
EcoNI	CCTNNNNNAGG	1 cut(s)	165
EcoO109I	RGGNCCY	1 cut(s)	2632
EcoRI	GAATTC	1 cut(s)	777
EcoRII	CCWGG	3 cut(s)	852, 1804, 1882
EcoT14I	CCWWGG	1 cut(s)	1423
EcoT22I	ATGCAT	1 cut(s)	633
EcoT38I	GRGCYC	1 cut(s)	2414
ErhI	CCWWGG	1 cut(s)	1423
FaeI	CATG	5 cut(s)	638, 656, 1841, 2231, 2420
FalI	AAGNNNNNCTT	4 cut(s)	1194, 1226, 1416, 1448
FaqI	GGGAC	2 cut(s)	739, 2251
FatI	CATG	5 cut(s)	634, 652, 1837, 2227, 2416
FauI	CCCGC	1 cut(s)	1434
FauNDI	CATATG	1 cut(s)	1156
FbaI	TGATCA	2 cut(s)	1074, 1660
FblI	GTMKAC	2 cut(s)	154, 835
Fnu4HI	GCNGC	9 cut(s)	122, 333, 450, 699, 868, 1206, 1698, 2498, 2583
FokI	GGATG	4 cut(s)	955, 1082, 2108, 2621
FriOI	GRGCYC	1 cut(s)	2414
Fsp4HI	GCNGC	9 cut(s)	122, 333, 450, 699, 868, 1206, 1698, 2498, 2583
FspBI	CTAG	5 cut(s)	125, 377, 2253, 2576, 2613
GlaI	GCGC	2 cut(s)	866, 2066
GluI	GCNGC	9 cut(s)	122, 333, 450, 699, 868, 1206, 1698, 2498, 2583
GsuI	CTGGAG	4 cut(s)	1295, 1861, 2349, 2586
HaeII	RGCGCY	1 cut(s)	868
HaeIII	GGCC	1 cut(s)	351
HapII	CCGG	2 cut(s)	972, 2093
HgaI	GACGC	2 cut(s)	687, 1196
HhaI	GCGC	2 cut(s)	867, 2067
Hin1II	CATG	5 cut(s)	638, 656, 1841, 2231, 2420
Hin6I	GCGC	2 cut(s)	865, 2065
HinP1I	GCGC	2 cut(s)	865, 2065
HincII	GTYRAC	2 cut(s)	537, 1960
HindII	GTYRAC	2 cut(s)	537, 1960
HindIII	AAGCTT	4 cut(s)	1322, 1362, 1676, 2438
HpaI	GTTAAC	1 cut(s)	537
HpaII	CCGG	2 cut(s)	972, 2093
HphI	GGTGA	5 cut(s)	116, 679, 1276, 1456, 1856
Hpy166II	GTNNAC	7 cut(s)	155, 173, 537, 836, 1549, 1960, 2471
Hpy8I	GTNNAC	7 cut(s)	155, 173, 537, 836, 1549, 1960, 2471
HpyAV	CCTTC	9 cut(s)	107, 376, 550, 1087, 1118, 1579, 1624, 1807, 2462
HpyCH4III	ACNGT	5 cut(s)	400, 458, 541, 731, 2224
HpyCH4IV	ACGT	2 cut(s)	583, 592
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1171, 1438, 1697, 2174, 2664
HpySE526I	ACGT	2 cut(s)	583, 592
Hsp92II	CATG	5 cut(s)	638, 656, 1841, 2231, 2420
HspAI	GCGC	2 cut(s)	865, 2065
Kpn2I	TCCGGA	1 cut(s)	971
KpnI	GGTACC	1 cut(s)	225
Ksp22I	TGATCA	2 cut(s)	1074, 1660
KspAI	GTTAAC	1 cut(s)	537
LguI	GCTCTTC	2 cut(s)	1431, 2402
LmnI	GCTCC	4 cut(s)	748, 1096, 1880, 2015
Lsp1109I	GCAGC	6 cut(s)	319, 461, 685, 1217, 1709, 2509
LweI	GCATC	7 cut(s)	640, 977, 1684, 2074, 2086, 2599, 2667
MaeI	CTAG	5 cut(s)	125, 377, 2253, 2576, 2613
MaeII	ACGT	2 cut(s)	583, 592
MaeIII	GTNAC	4 cut(s)	482, 1103, 1844, 2323
MbiI	CCGCTC	2 cut(s)	1441, 1875
MflI	RGATCY	6 cut(s)	281, 373, 386, 688, 705, 2242
MhlI	GDGCHC	1 cut(s)	2414
MlyI	GAGTC	5 cut(s)	578, 742, 1298, 1412, 1520
MmeI	TCCRAC	6 cut(s)	500, 619, 750, 770, 1116, 1508
Mph1103I	ATGCAT	1 cut(s)	633
MroI	TCCGGA	1 cut(s)	971
MslI	CAYNNNNRTG	1 cut(s)	1842
MspCI	CTTAAG	1 cut(s)	2339
MspI	CCGG	2 cut(s)	972, 2093
MspR9I	CCNGG	3 cut(s)	854, 1806, 1884
MvaI	CCWGG	3 cut(s)	854, 1806, 1884
MvnI	CGCG	3 cut(s)	924, 1190, 2067
MwoI	GCNNNNNNNGC	5 cut(s)	1171, 1438, 1697, 2174, 2664
NdeI	CATATG	1 cut(s)	1156
NheI	GCTAGC	1 cut(s)	124
NlaIII	CATG	5 cut(s)	638, 656, 1841, 2231, 2420
NlaIV	GGNNCC	4 cut(s)	43, 223, 976, 1004
NmeAIII	GCCGAG	1 cut(s)	1726
NmuCI	GTSAC	1 cut(s)	1844
NruI	TCGCGA	1 cut(s)	924
NsiI	ATGCAT	1 cut(s)	633
NspI	RCATGY	1 cut(s)	1841
PceI	AGGCCT	1 cut(s)	351
PciI	ACATGT	1 cut(s)	1837
PciSI	GCTCTTC	2 cut(s)	1431, 2402
PcsI	WCGNNNNNNNCGW	1 cut(s)	589
PfeI	GAWTC	6 cut(s)	5, 341, 945, 1250, 1472, 1991
PflFI	GACNNNGTC	1 cut(s)	751
PfoI	TCCNGGA	1 cut(s)	852
PkrI	GCNGC	9 cut(s)	123, 334, 451, 700, 869, 1207, 1699, 2499, 2584
PleI	GAGTC	5 cut(s)	577, 742, 1297, 1411, 1519
PpsI	GAGTC	5 cut(s)	577, 742, 1297, 1411, 1519
Ppu21I	YACGTR	1 cut(s)	593
PpuMI	RGGWCCY	1 cut(s)	2632
PscI	ACATGT	1 cut(s)	1837
PshAI	GACNNNNGTC	1 cut(s)	436
PshBI	ATTAAT	2 cut(s)	626, 2141
Psp1406I	AACGTT	1 cut(s)	583
Psp5II	RGGWCCY	1 cut(s)	2632
Psp6I	CCWGG	3 cut(s)	852, 1804, 1882
PspGI	CCWGG	3 cut(s)	852, 1804, 1882
PspN4I	GGNNCC	4 cut(s)	43, 223, 976, 1004
PspPI	GGNCC	3 cut(s)	1032, 1925, 2632
PspPPI	RGGWCCY	1 cut(s)	2632
PstNI	CAGNNNCTG	1 cut(s)	182
PsuI	RGATCY	6 cut(s)	281, 373, 386, 688, 705, 2242
PsyI	GACNNNGTC	1 cut(s)	751
RruI	TCGCGA	1 cut(s)	924
RsaI	GTAC	6 cut(s)	100, 223, 954, 2232, 2421, 2539
RsaNI	GTAC	6 cut(s)	99, 222, 953, 2231, 2420, 2538
RseI	CAYNNNNRTG	1 cut(s)	1842
SapI	GCTCTTC	2 cut(s)	1431, 2402
SatI	GCNGC	9 cut(s)	122, 333, 450, 699, 868, 1206, 1698, 2498, 2583
Sau96I	GGNCC	3 cut(s)	1032, 1925, 2632
ScaI	AGTACT	2 cut(s)	954, 2539
SchI	GAGTC	5 cut(s)	578, 742, 1298, 1412, 1520
ScrFI	CCNGG	3 cut(s)	854, 1806, 1884
SduI	GDGCHC	1 cut(s)	2414
SfaNI	GCATC	7 cut(s)	640, 977, 1684, 2074, 2086, 2599, 2667
SfcI	CTRYAG	2 cut(s)	540, 1963
SinI	GGWCC	3 cut(s)	1032, 1925, 2632
SmiMI	CAYNNNNRTG	1 cut(s)	1842
SmlI	CTYRAG	6 cut(s)	52, 199, 879, 1388, 2339, 2445
SmoI	CTYRAG	6 cut(s)	52, 199, 879, 1388, 2339, 2445
SnaBI	TACGTA	1 cut(s)	593
SpeI	ACTAGT	1 cut(s)	2252
SseBI	AGGCCT	1 cut(s)	351
SsiI	CCGC	6 cut(s)	121, 371, 868, 1441, 1873, 2582
SspMI	CTAG	5 cut(s)	125, 377, 2253, 2576, 2613
StuI	AGGCCT	1 cut(s)	351
StyD4I	CCNGG	3 cut(s)	852, 1804, 1882
StyI	CCWWGG	1 cut(s)	1423
TaaI	ACNGT	5 cut(s)	400, 458, 541, 731, 2224
TaiI	ACGT	2 cut(s)	586, 595
TaqI	TCGA	3 cut(s)	47, 499, 1900
TatI	WGTACW	2 cut(s)	952, 2537
TauI	GCSGC	3 cut(s)	124, 870, 2585
TfiI	GAWTC	6 cut(s)	5, 341, 945, 1250, 1472, 1991
TscAI	CASTG	3 cut(s)	303, 1063, 2185
TseFI	GTSAC	1 cut(s)	1844
TseI	GCWGC	6 cut(s)	332, 449, 698, 1205, 1697, 2497
Tsp45I	GTSAC	1 cut(s)	1844
TspGWI	ACGGA	2 cut(s)	522, 2255
TspRI	CASTG	3 cut(s)	303, 1063, 2185
Tth111I	GACNNNGTC	1 cut(s)	751
Vha464I	CTTAAG	1 cut(s)	2339
VpaK11BI	GGWCC	3 cut(s)	1032, 1925, 2632
VspI	ATTAAT	2 cut(s)	626, 2141
XagI	CCTNNNNNAGG	1 cut(s)	165
XapI	RAATTY	7 cut(s)	575, 777, 1113, 1504, 1565, 1655, 1749
XbaI	TCTAGA	1 cut(s)	376
XceI	RCATGY	1 cut(s)	1841
XmiI	GTMKAC	2 cut(s)	154, 835
XspI	CTAG	5 cut(s)	125, 377, 2253, 2576, 2613
ZrmI	AGTACT	2 cut(s)	954, 2539
Zsp2I	ATGCAT	1 cut(s)	633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.