Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005739

Physical Location & Seq

Genomic Coordinates Forward (+)

7339450 .. 7346254

Gene Structure 6805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16740

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGACGATTCCGGATTCAGGTTTCATGATGGAGAACGAGGCGAGCTGCTTACCGCACACACCGGAGGAGGAGAAGCGGATCATTGACGAATTGACCCGCCAATCCGAAGCCAATGTTAAAGAAGGCAACTTGTTCTACGTTATTTCTAACAGGTGGTTCTCAAGCTGGAAGATGTATGTTGAACAAGGCACCGGAGAGAATGATAAGTGGGATTCTGAATCCCAACATATGGATCTGCTTTCTTCAAAAATTAACAGACCTGGACCAATTGATAATTCTGATATAGTTGAAAAAGAATCCGAGGGAGGTGGAGGTGATCTACAGCTTCGTAGAATGCTGATGGAAGAGCTTGACTATGTCTTAGTTTCTCAAGAAGTTTGGGAAAAGCTATTTGATTGGTATAAAGGAGGTCCATCATTACCAAGAAAGATGATTTCTCAGGGCGGCATTAATAAGAATTTGATGGTGGAGGTTTACCCATTGTGTCTTAAGATTGTTGATTCTAGAGACAACAGCCAGGCAGTTATCTGGTTAAGCAAAAAGGCTTCTGTCCAGGAGCTTTACGAGAAGGTGCACACAATTAGAGGAATTGAGCAACAAAAGGCCTGTATCTGGGATTACTTCAACAAGCAGAAGCAGTCATTATTGAATGCTTCGAACCAAACGTTGGAGCAGTTGAACTTGCAGATGGATCAAGATGTTCTTCTTGAGGTGCAAGTTGATGGAAACTATTCCTCCCAAATTTCCATGGATTCAACTGGAAATGAGTTAGCATTGGTAACTGTAGAACCATCAAGGTCATCGATGACAATTGCCGGGGGTCCTACTTTGTCGAATGGTCATTCGATGGGTTATAATAATAATTTGCTTCAGGGAAGCACCTTAAGTGGCTCAGCATCAACAGATACAGATGACAGACCTTACGTTTACAATCCAATGAAAAAAGGAGATAAGGGAGGTTTGGCAGGATTGCAGAATCTCGGAAATACTTGCTTTATGAATAGTTCCCTCCAGTGCTTAGTCCATACACCCCCTCTTGTTGATTATTTTTTGCAAGATTACTCTGATGAGATCAACACAGACAATCCCTTAGGGATGCATGGTGAGCTTGCTCTTGCCTTTGGTGAGCTGTTGAGGAAATTGTGGTCCTCTGGGAGAACAACAATTGCTCCACGTGCATTCAAGGGAAAACTTGCTCGATTTGCTCCTCAGTTTAGTGGTTATAATCAGCATGACTCTCAGGAACTTCTTGCTTTCTTACTGGATGGACTGCATGAAGATTTGAATCGTGTCAAAAATAAGCCCTACATTGAAACAAAGGATTCAGATGGTCGTCCGGATGAGGAAGTTGCAGATGAGTGTTGGAAAAATCACAAGGCCCGGAATGATTCATTGATTGTGGATGTTTGCCAAGGTCAATATAAGTCAACTTTGGTATGCCCGTCTTGTGCCAAGGTTTCAATTACCTTTGATCCTTTTATGTACTTATCGGTGCCACTACCTTCAACTGTTACTCGGTCAATGACGGTGACTGTACTTTATGGTGATGGACGGGGTCTTCCAATGCCGTACACTGTAACCTTGATAAAAGATCGCTCCGTTAAAGATCTTGTTGAGGCATTGGGGACTGCATGCTGCTTGAAGAGTGATGAAAGCCTTCTGCTTGCTGAGATATACGAGCATCGAATTTATCGATATTTGGAGAGCCCTTCTGAGCACTTGTCTTCAATTAAGCCTGATGAACGTATTGTGGCCTATCGGTATTCTAAAGGGGCAGGAACAACCAGACTTGAAATAATGCATCGACGGCAGGAAAAATGTGCATTGGATCCTTTGAAGGGTCAGAGAAAACTTTTTGGAACACCTTTGGTTACTTATCTAGGAGAAGACCAAATAAATGGAGTTGATATTGAAAGAGCTGTTTCTACATCTCTGTCCCCTTTGAGGAGAGCTGTTAAGCTTCATAGTACAAAAGAAAATGGCTCAACTTCAGAAGCTGTTGATGAACCATCAAACAGCTACAATTTGAGGTCCATGGACAATACAGAACTAGAGGAAGCATCTAGCAGGGAGTTATCCTTTCACCTATTTCTAGCCCTTGATGAAAGGGGTCACACATGCAAGCCACTTGAGAAGTTTTCTTCCTTAAAGTCTGGTAAAAATATTAAGGTTTTTCTGGACTGGACTGAGAAAGAAGATGAATCATATGATGCTAGTTACCTGGAGAATCTACCTGAGGTACACAAGTCCGGTAATACTGCAAAGAAAACTCGACAAGAAGCTATTTCCTTATTTACTTGCTTAGAGGCATTCTTGAAGGAAGAACCTTTGGGTCCCTCGGATATGTGGTACTGCCCAAGGTGCAAGGAGCATAGACAGGCTACCAAGAAGCTGGACTTGTGGATGTTGCCAGAGGTTCTGGTTTTTCACTTGAAACGATTCTCATACAGCAGATACTCGAAGAACAAACTCGACAGTTTTGTGACTTTTCCAATTCATAATCTTGATTTGAGTAGATATGTGATGAGCAAGGATGGGAAACCGTATATATATGAGCTATACGCCATTAGCAACCATTATGGTGGTCTAGGTGGTGGGCACTACACTGCATATGCGAAGTTGATTGATGAGAACAGATGGTACCATTTCGATGACAGTCATGTTTCTCCAGTCAGTGAAAGCGACATCAAGACTTCGGCTGCCTATGTGCTTTTTTATCGAAGAGTTAAAAGTGGATCAAATACAGGAGAGGGCGATGCATCAGAGACTCATATGGCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUSP UCH

Protein Analysis

927

Amino Acids

104.77

Weight (kDa)

5.53

Isoelectric Point (pI)

47.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUSP	PF06337	43 - 145	7.8e-22	DUSP domain
UCH	PF00443	322 - 906	1.3e-77	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	322 - 498	7.1e-06	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32850 AT4G10570 AT4G10590 AT4G10590 AT4G10590 AT4G10590
fragaria_vesca	FvH4_5g10610 FvH4_5g10610 FvH4_5g10610
malus_domestica	MD06G1121900.v1.1 MD14G1138300.v1.1
prunus_persica	Prupe.5G132600_v2.0.a1 Prupe.5G132600_v2.0.a1 Prupe.5G132600_v2.0.a1
pyrus_communis	pycom06g11300 pycom14g11340
rosa_chinensis	RchiOBHm_Chr7g0187531
rosa_laevigata	RLG00000004773
rosa_multiflora	Rmu_sc0008640.1_g000004 Rmu_sc0014966.1_g000001 Rmu_sc0023622.1_g000001 Rmu_ssc0000110.1_g000024
rosa_roxburghii	Rroxscaffold_3G00267350
rosa_rugosa	Rorug06G0482500
rosa_samantha	Rh7AG087100 Rh7BG088500 Rh7CG087800 Rh7DG089400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	855, 1224
Acc65I	GGTACC	1 cut(s)	2640
AccB1I	GGYRCC	3 cut(s)	188, 1492, 2640
AccB7I	CCANNNNNTGG	2 cut(s)	229, 667
AccIII	TCCGGA	2 cut(s)	10, 1336
AciI	CCGC	4 cut(s)	53, 76, 97, 444
AclI	AACGTT	1 cut(s)	665
AclWI	GGATC	7 cut(s)	86, 240, 699, 1466, 1823, 1836, 2743
AcsI	RAATTY	3 cut(s)	457, 741, 1686
AcuI	CTGAAG	2 cut(s)	854, 1974
AcvI	CACGTG	1 cut(s)	1175
AfaI	GTAC	7 cut(s)	1484, 1536, 1571, 1969, 2241, 2351, 2642
AfiI	CCNNNNNNNGG	6 cut(s)	17, 229, 612, 667, 1838, 1944
AflII	CTTAAG	2 cut(s)	488, 883
AjnI	CCWGG	4 cut(s)	259, 516, 552, 2220
AjuI	GAANNNNNNNTTGG	4 cut(s)	259, 291, 650, 682
Alw21I	GWGCWC	2 cut(s)	576, 1719
Alw26I	GTCTC	2 cut(s)	501, 2759
Alw44I	GTGCAC	1 cut(s)	572
AlwI	GGATC	7 cut(s)	86, 240, 699, 1466, 1823, 1836, 2743
AlwNI	CAGNNNCTG	1 cut(s)	1997
Aor13HI	TCCGGA	2 cut(s)	10, 1336
AoxI	GGCC	3 cut(s)	603, 1377, 1752
ApaLI	GTGCAC	1 cut(s)	572
ApeKI	GCWGC	3 cut(s)	45, 1635, 2699
ApoI	RAATTY	3 cut(s)	457, 741, 1686
AseI	ATTAAT	1 cut(s)	450
Asp700I	GAANNNNTTC	3 cut(s)	730, 1656, 2438
Asp718I	GGTACC	1 cut(s)	2640
AspS9I	GGNCC	7 cut(s)	263, 410, 821, 1146, 1378, 2031, 2333
AsuC2I	CCSGG	2 cut(s)	817, 1381
AsuHPI	GGTGA	6 cut(s)	326, 1115, 1136, 1540, 1556, 2075
AsuII	TTCGAA	1 cut(s)	656
AvaII	GGWCC	6 cut(s)	263, 410, 821, 1146, 2031, 2333
AxyI	CCTNAGG	2 cut(s)	1090, 2235
BaeGI	GKGCMC	2 cut(s)	576, 2601
BaeI	ACNNNNGTAYC	2 cut(s)	2231, 2264
BamHI	GGATCC	1 cut(s)	1828
BanI	GGYRCC	3 cut(s)	188, 1492, 2640
BanII	GRGCYC	1 cut(s)	1709
BbrPI	CACGTG	1 cut(s)	1175
BbsI	GAAGAC	3 cut(s)	1550, 1716, 1893
Bbv12I	GWGCWC	2 cut(s)	576, 1719
BbvI	GCAGC	3 cut(s)	32, 1622, 2686
BceAI	ACGGC	2 cut(s)	1552, 1823
BciT130I	CCWGG	4 cut(s)	261, 518, 554, 2222
BcnI	CCSGG	2 cut(s)	817, 1381
BcoDI	GTCTC	2 cut(s)	501, 2759
BfaI	CTAG	7 cut(s)	504, 1880, 2051, 2064, 2093, 2214, 2588
BfmI	CTRYAG	2 cut(s)	320, 783
BfrI	CTTAAG	2 cut(s)	488, 883
BglII	AGATCT	1 cut(s)	1606
BisI	GCNGC	4 cut(s)	46, 445, 1636, 2700
BlpI	GCTNAGC	1 cut(s)	892
BlsI	GCNGC	4 cut(s)	47, 446, 1637, 2701
Bme1390I	CCNGG	6 cut(s)	261, 518, 554, 817, 1381, 2222
Bme18I	GGWCC	6 cut(s)	263, 410, 821, 1146, 2031, 2333
BmgT120I	GGNCC	7 cut(s)	263, 410, 821, 1146, 1378, 2031, 2333
BmiI	GGNNCC	7 cut(s)	190, 822, 1494, 1830, 2334, 2335, 2642
BmrFI	CCNGG	6 cut(s)	261, 518, 554, 817, 1381, 2222
BmsI	GCATC	8 cut(s)	905, 1086, 1690, 1810, 2069, 2200, 2746, 2768
BpiI	GAAGAC	3 cut(s)	1550, 1716, 1893
BpmI	CTGGAG	3 cut(s)	995, 2243, 2652
Bpu1102I	GCTNAGC	1 cut(s)	892
Bpu14I	TTCGAA	1 cut(s)	656
BpuEI	CTTGAG	4 cut(s)	145, 354, 728, 2150
BpuMI	CCSGG	2 cut(s)	817, 1381
Bsa29I	ATCGAT	2 cut(s)	803, 1693
BsaAI	YACGTR	1 cut(s)	1175
BsaBI	GATNNNNATC	1 cut(s)	1284
BsaJI	CCNNGG	8 cut(s)	300, 747, 816, 1411, 1452, 2034, 2337, 2357
BsaWI	WCCGGW	5 cut(s)	10, 61, 191, 1336, 2249
BsaXI	ACNNNNNCTCC	4 cut(s)	719, 749, 1153, 1183
Bsc4I	CCNNNNNNNGG	6 cut(s)	17, 229, 612, 667, 1838, 1944
Bse1I	ACTGG	5 cut(s)	763, 1012, 1266, 2186, 2669
Bse21I	CCTNAGG	2 cut(s)	1090, 2235
Bse8I	GATNNNNATC	1 cut(s)	1284
BseAI	TCCGGA	2 cut(s)	10, 1336
BseBI	CCWGG	4 cut(s)	261, 518, 554, 2222
BseCI	ATCGAT	2 cut(s)	803, 1693
BseDI	CCNNGG	8 cut(s)	300, 747, 816, 1411, 1452, 2034, 2337, 2357
BseGI	GGATG	6 cut(s)	1101, 1270, 1345, 1408, 2409, 2539
BseJI	GATNNNNATC	1 cut(s)	1284
BseLI	CCNNNNNNNGG	6 cut(s)	17, 229, 612, 667, 1838, 1944
BseMII	CTCAG	8 cut(s)	452, 906, 1223, 1253, 1659, 1704, 2178, 2226
BseNI	ACTGG	5 cut(s)	763, 1012, 1266, 2186, 2669
BseRI	GAGGAG	4 cut(s)	80, 83, 1197, 1960
BseSI	GKGCMC	2 cut(s)	576, 2601
BseXI	GCAGC	3 cut(s)	32, 1622, 2686
BshFI	GGCC	3 cut(s)	605, 1379, 1754
BshNI	GGYRCC	3 cut(s)	188, 1492, 2640
BshVI	ATCGAT	2 cut(s)	803, 1693
BsiHKAI	GWGCWC	2 cut(s)	576, 1719
BsiSI	CCGG	7 cut(s)	11, 62, 192, 816, 1337, 1381, 2250
BslFI	GGGAC	3 cut(s)	1639, 1921, 2319
BslI	CCNNNNNNNGG	6 cut(s)	17, 229, 612, 667, 1838, 1944
BsmAI	GTCTC	2 cut(s)	501, 2759
BsmFI	GGGAC	3 cut(s)	1639, 1921, 2319
BsmI	GAATGC	4 cut(s)	339, 655, 1178, 2309
BsnI	GGCC	3 cut(s)	605, 1379, 1754
Bsp119I	TTCGAA	1 cut(s)	656
Bsp1286I	GDGCHC	4 cut(s)	576, 1709, 1719, 2601
Bsp13I	TCCGGA	2 cut(s)	10, 1336
Bsp1720I	GCTNAGC	1 cut(s)	892
Bsp19I	CCATGG	2 cut(s)	747, 2034
BspACI	CCGC	4 cut(s)	53, 76, 97, 444
BspANI	GGCC	3 cut(s)	605, 1379, 1754
BspCNI	CTCAG	8 cut(s)	451, 905, 1222, 1252, 1660, 1705, 2179, 2227
BspDI	ATCGAT	2 cut(s)	803, 1693
BspEI	TCCGGA	2 cut(s)	10, 1336
BspHI	TCATGA	1 cut(s)	24
BspLI	GGNNCC	7 cut(s)	190, 822, 1494, 1830, 2334, 2335, 2642
BspPI	GGATC	7 cut(s)	86, 240, 699, 1466, 1823, 1836, 2743
BspQI	GCTCTTC	1 cut(s)	339
BspT104I	TTCGAA	1 cut(s)	656
BspT107I	GGYRCC	3 cut(s)	188, 1492, 2640
BspTI	CTTAAG	2 cut(s)	488, 883
BsrI	ACTGG	5 cut(s)	763, 1012, 1266, 2186, 2669
BssECI	CCNNGG	8 cut(s)	300, 747, 816, 1411, 1452, 2034, 2337, 2357
BssT1I	CCWWGG	5 cut(s)	747, 1411, 1452, 2034, 2357
Bst2UI	CCWGG	4 cut(s)	261, 518, 554, 2222
Bst4CI	ACNGT	8 cut(s)	784, 1510, 1528, 1534, 1576, 2477, 2544, 2657
Bst6I	CTCTTC	3 cut(s)	339, 1637, 2716
BstAFI	CTTAAG	2 cut(s)	488, 883
BstBAI	YACGTR	1 cut(s)	1175
BstBI	TTCGAA	1 cut(s)	656
BstC8I	GCNNGC	5 cut(s)	43, 1110, 1633, 1665, 2123
BstDSI	CCRYGG	2 cut(s)	747, 2034
BstF5I	GGATG	6 cut(s)	1101, 1270, 1345, 1408, 2409, 2539
BstMAI	GTCTC	2 cut(s)	501, 2759
BstMWI	GCNNNNNNNGC	5 cut(s)	1105, 1175, 1202, 1807, 2361
BstNI	CCWGG	4 cut(s)	261, 518, 554, 2222
BstNSI	RCATGY	2 cut(s)	1635, 2121
BstSCI	CCNGG	6 cut(s)	259, 516, 552, 815, 1379, 2220
BstSFI	CTRYAG	2 cut(s)	320, 783
BstSLI	GKGCMC	2 cut(s)	576, 2601
BstV1I	GCAGC	3 cut(s)	32, 1622, 2686
BstV2I	GAAGAC	3 cut(s)	1550, 1716, 1893
BstX2I	RGATCY	3 cut(s)	232, 1606, 1828
BstXI	CCANNNNNNTGG	3 cut(s)	1898, 2392, 2582
BstYI	RGATCY	3 cut(s)	232, 1606, 1828
Bsu15I	ATCGAT	2 cut(s)	803, 1693
Bsu36I	CCTNAGG	2 cut(s)	1090, 2235
BsuRI	GGCC	3 cut(s)	605, 1379, 1754
BsuTUI	ATCGAT	2 cut(s)	803, 1693
BtgI	CCRYGG	2 cut(s)	747, 2034
BtgZI	GCGATG	1 cut(s)	2769
BtsCI	GGATG	6 cut(s)	1101, 1270, 1345, 1408, 2409, 2539
BtsI	GCAGTG	1 cut(s)	2604
BtsIMutI	CAGTG	4 cut(s)	1019, 1572, 2604, 2680
Cac8I	GCNNGC	5 cut(s)	43, 1110, 1633, 1665, 2123
CaiI	CAGNNNCTG	1 cut(s)	1997
CciI	TCATGA	1 cut(s)	24
Cfr13I	GGNCC	7 cut(s)	263, 410, 821, 1146, 1378, 2031, 2333
ClaI	ATCGAT	2 cut(s)	803, 1693
Csp6I	GTAC	7 cut(s)	1483, 1535, 1570, 1968, 2240, 2350, 2641
CviAII	CATG	9 cut(s)	25, 748, 1100, 1232, 1274, 1632, 2035, 2118, 2660
CviQI	GTAC	7 cut(s)	1483, 1535, 1570, 1968, 2240, 2350, 2641
Eam1104I	CTCTTC	3 cut(s)	339, 1637, 2716
EarI	CTCTTC	3 cut(s)	339, 1637, 2716
Eco130I	CCWWGG	5 cut(s)	747, 1411, 1452, 2034, 2357
Eco147I	AGGCCT	1 cut(s)	605
Eco24I	GRGCYC	1 cut(s)	1709
Eco47I	GGWCC	6 cut(s)	263, 410, 821, 1146, 2031, 2333
Eco57I	CTGAAG	2 cut(s)	854, 1974
Eco72I	CACGTG	1 cut(s)	1175
Eco81I	CCTNAGG	2 cut(s)	1090, 2235
EcoO109I	RGGNCCY	2 cut(s)	821, 2333
EcoRII	CCWGG	4 cut(s)	259, 516, 552, 2220
EcoT14I	CCWWGG	5 cut(s)	747, 1411, 1452, 2034, 2357
EcoT22I	ATGCAT	3 cut(s)	1101, 1803, 2761
EcoT38I	GRGCYC	1 cut(s)	1709
ErhI	CCWWGG	5 cut(s)	747, 1411, 1452, 2034, 2357
FaeI	CATG	9 cut(s)	28, 751, 1103, 1235, 1277, 1635, 2038, 2121, 2663
FalI	AAGNNNNNCTT	4 cut(s)	687, 719, 2381, 2413
FaqI	GGGAC	3 cut(s)	1639, 1921, 2319
FatI	CATG	9 cut(s)	24, 747, 1099, 1231, 1273, 1631, 2034, 2117, 2659
FauI	CCCGC	1 cut(s)	104
FauNDI	CATATG	4 cut(s)	228, 2206, 2611, 2772
Fnu4HI	GCNGC	4 cut(s)	46, 445, 1636, 2700
FokI	GGATG	6 cut(s)	1108, 1277, 1352, 1415, 2416, 2546
FriOI	GRGCYC	1 cut(s)	1709
Fsp4HI	GCNGC	4 cut(s)	46, 445, 1636, 2700
FspBI	CTAG	7 cut(s)	504, 1880, 2051, 2064, 2093, 2214, 2588
GluI	GCNGC	4 cut(s)	46, 445, 1636, 2700
GsuI	CTGGAG	3 cut(s)	995, 2243, 2652
HaeIII	GGCC	3 cut(s)	605, 1379, 1754
HapII	CCGG	7 cut(s)	11, 62, 192, 816, 1337, 1381, 2250
Hin1II	CATG	9 cut(s)	28, 751, 1103, 1235, 1277, 1635, 2038, 2121, 2663
HincII	GTYRAC	1 cut(s)	1428
HindII	GTYRAC	1 cut(s)	1428
HindIII	AAGCTT	1 cut(s)	1958
HpaII	CCGG	7 cut(s)	11, 62, 192, 816, 1337, 1381, 2250
HphI	GGTGA	6 cut(s)	326, 1115, 1136, 1540, 1556, 2075
Hpy166II	GTNNAC	6 cut(s)	475, 574, 928, 1428, 1572, 2242
Hpy8I	GTNNAC	6 cut(s)	475, 574, 928, 1428, 1572, 2242
Hpy99I	CGWCG	1 cut(s)	1809
HpyAV	CCTTC	7 cut(s)	116, 562, 1512, 1667, 1719, 1831, 2311
HpyCH4III	ACNGT	8 cut(s)	784, 1510, 1528, 1534, 1576, 2477, 2544, 2657
HpyCH4IV	ACGT	5 cut(s)	138, 665, 924, 1174, 1744
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1105, 1175, 1202, 1807, 2361
HpySE526I	ACGT	5 cut(s)	138, 665, 924, 1174, 1744
Hsp92II	CATG	9 cut(s)	28, 751, 1103, 1235, 1277, 1635, 2038, 2121, 2663
KflI	GGGWCCC	1 cut(s)	2333
Kpn2I	TCCGGA	2 cut(s)	10, 1336
KpnI	GGTACC	1 cut(s)	2644
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	6 cut(s)	556, 670, 1174, 1210, 1601, 2368
Lsp1109I	GCAGC	3 cut(s)	32, 1622, 2686
LweI	GCATC	8 cut(s)	905, 1086, 1690, 1810, 2069, 2200, 2746, 2768
MaeI	CTAG	7 cut(s)	504, 1880, 2051, 2064, 2093, 2214, 2588
MaeII	ACGT	5 cut(s)	138, 665, 924, 1174, 1744
MaeIII	GTNAC	8 cut(s)	778, 1510, 1528, 1576, 1870, 2111, 2216, 2482
MfeI	CAATTG	3 cut(s)	267, 810, 1164
MflI	RGATCY	3 cut(s)	232, 1606, 1828
MhlI	GDGCHC	4 cut(s)	576, 1709, 1719, 2601
MlyI	GAGTC	2 cut(s)	1229, 2761
MmeI	TCCRAC	2 cut(s)	648, 1343
Mph1103I	ATGCAT	3 cut(s)	1101, 1803, 2761
MroI	TCCGGA	2 cut(s)	10, 1336
MroXI	GAANNNNTTC	3 cut(s)	730, 1656, 2438
MslI	CAYNNNNRTG	2 cut(s)	2580, 2649
MspCI	CTTAAG	2 cut(s)	488, 883
MspI	CCGG	7 cut(s)	11, 62, 192, 816, 1337, 1381, 2250
MspR9I	CCNGG	6 cut(s)	261, 518, 554, 817, 1381, 2222
MunI	CAATTG	3 cut(s)	267, 810, 1164
Mva1269I	GAATGC	4 cut(s)	339, 655, 1178, 2309
MvaI	CCWGG	4 cut(s)	261, 518, 554, 2222
MwoI	GCNNNNNNNGC	5 cut(s)	1105, 1175, 1202, 1807, 2361
NciI	CCSGG	2 cut(s)	817, 1381
NcoI	CCATGG	2 cut(s)	747, 2034
NdeI	CATATG	4 cut(s)	228, 2206, 2611, 2772
NlaIII	CATG	9 cut(s)	28, 751, 1103, 1235, 1277, 1635, 2038, 2121, 2663
NlaIV	GGNNCC	7 cut(s)	190, 822, 1494, 1830, 2334, 2335, 2642
NmuCI	GTSAC	3 cut(s)	1528, 2111, 2482
NsiI	ATGCAT	3 cut(s)	1101, 1803, 2761
NspI	RCATGY	2 cut(s)	1635, 2121
NspV	TTCGAA	1 cut(s)	656
PaeI	GCATGC	1 cut(s)	1635
PagI	TCATGA	1 cut(s)	24
PceI	AGGCCT	1 cut(s)	605
PciSI	GCTCTTC	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	2 cut(s)	662, 1690
PctI	GAATGC	4 cut(s)	339, 655, 1178, 2309
PdmI	GAANNNNTTC	3 cut(s)	730, 1656, 2438
PflFI	GACNNNGTC	2 cut(s)	356, 1554
PflMI	CCANNNNNTGG	2 cut(s)	229, 667
PfoI	TCCNGGA	1 cut(s)	552
PkrI	GCNGC	4 cut(s)	47, 446, 1637, 2701
PleI	GAGTC	2 cut(s)	1229, 2761
PmaCI	CACGTG	1 cut(s)	1175
PmlI	CACGTG	1 cut(s)	1175
PpsI	GAGTC	2 cut(s)	1229, 2761
Ppu21I	YACGTR	1 cut(s)	1175
PpuMI	RGGWCCY	2 cut(s)	821, 2333
PshBI	ATTAAT	1 cut(s)	450
PsiI	TTATAA	2 cut(s)	855, 1224
Psp1406I	AACGTT	1 cut(s)	665
Psp5II	RGGWCCY	2 cut(s)	821, 2333
Psp6I	CCWGG	4 cut(s)	259, 516, 552, 2220
PspCI	CACGTG	1 cut(s)	1175
PspGI	CCWGG	4 cut(s)	259, 516, 552, 2220
PspN4I	GGNNCC	7 cut(s)	190, 822, 1494, 1830, 2334, 2335, 2642
PspPI	GGNCC	7 cut(s)	263, 410, 821, 1146, 1378, 2031, 2333
PspPPI	RGGWCCY	2 cut(s)	821, 2333
PsrI	GAACNNNNNNTAC	2 cut(s)	2624, 2656
PstNI	CAGNNNCTG	1 cut(s)	1997
PsuI	RGATCY	3 cut(s)	232, 1606, 1828
PsyI	GACNNNGTC	2 cut(s)	356, 1554
RsaI	GTAC	7 cut(s)	1484, 1536, 1571, 1969, 2241, 2351, 2642
RsaNI	GTAC	7 cut(s)	1483, 1535, 1570, 1968, 2240, 2350, 2641
RseI	CAYNNNNRTG	2 cut(s)	2580, 2649
SapI	GCTCTTC	1 cut(s)	339
SatI	GCNGC	4 cut(s)	46, 445, 1636, 2700
Sau96I	GGNCC	7 cut(s)	263, 410, 821, 1146, 1378, 2031, 2333
SchI	GAGTC	2 cut(s)	1229, 2761
ScrFI	CCNGG	6 cut(s)	261, 518, 554, 817, 1381, 2222
SduI	GDGCHC	4 cut(s)	576, 1709, 1719, 2601
SfaNI	GCATC	8 cut(s)	905, 1086, 1690, 1810, 2069, 2200, 2746, 2768
SfcI	CTRYAG	2 cut(s)	320, 783
SfuI	TTCGAA	1 cut(s)	656
SinI	GGWCC	6 cut(s)	263, 410, 821, 1146, 2031, 2333
SmiMI	CAYNNNNRTG	2 cut(s)	2580, 2649
SmlI	CTYRAG	6 cut(s)	160, 369, 488, 707, 883, 2129
SmoI	CTYRAG	6 cut(s)	160, 369, 488, 707, 883, 2129
SphI	GCATGC	1 cut(s)	1635
SseBI	AGGCCT	1 cut(s)	605
SsiI	CCGC	4 cut(s)	53, 76, 97, 444
SspI	AATATT	1 cut(s)	2164
SspMI	CTAG	7 cut(s)	504, 1880, 2051, 2064, 2093, 2214, 2588
StuI	AGGCCT	1 cut(s)	605
StyD4I	CCNGG	6 cut(s)	259, 516, 552, 815, 1379, 2220
StyI	CCWWGG	5 cut(s)	747, 1411, 1452, 2034, 2357
TaaI	ACNGT	8 cut(s)	784, 1510, 1528, 1534, 1576, 2477, 2544, 2657
TaiI	ACGT	5 cut(s)	141, 668, 927, 1177, 1747
TaqII	GACCGA	1 cut(s)	1506
TatI	WGTACW	3 cut(s)	1482, 1534, 1967
TauI	GCSGC	1 cut(s)	447
TscAI	CASTG	4 cut(s)	1019, 1579, 2611, 2680
TseFI	GTSAC	3 cut(s)	1528, 2111, 2482
TseI	GCWGC	3 cut(s)	45, 1635, 2699
Tsp45I	GTSAC	3 cut(s)	1528, 2111, 2482
TspGWI	ACGGA	1 cut(s)	1588
TspRI	CASTG	4 cut(s)	1019, 1579, 2611, 2680
Tth111I	GACNNNGTC	2 cut(s)	356, 1554
Van91I	CCANNNNNTGG	2 cut(s)	229, 667
Vha464I	CTTAAG	2 cut(s)	488, 883
VneI	GTGCAC	1 cut(s)	572
VpaK11BI	GGWCC	6 cut(s)	263, 410, 821, 1146, 2031, 2333
VspI	ATTAAT	1 cut(s)	450
XapI	RAATTY	3 cut(s)	457, 741, 1686
XbaI	TCTAGA	1 cut(s)	503
XceI	RCATGY	2 cut(s)	1635, 2121
XmnI	GAANNNNTTC	3 cut(s)	730, 1656, 2438
XspI	CTAG	7 cut(s)	504, 1880, 2051, 2064, 2093, 2214, 2588
Zsp2I	ATGCAT	3 cut(s)	1101, 1803, 2761

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.