Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005739

Physical Location & Seq

Genomic Coordinates Forward (+)

6631510 .. 6638804

Gene Structure 7295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG087800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2883 bp

ATGTGCGACGTAGAGTTTAACTTGGATACATTTTCGCCTCTGACTCCGCAGTTAAAAGAAAAAGAAAAAAAAAGGACTAGATCGTTGAAAACGACGGTGAGAGATTTCTCTCCGACTCCCCCAACTACCGTCCACCTTCAACAATCTAGGGCTTCCTCTCACATTTCTCTCTTCTCTGCTCCGCGATCTCTTCCCTTCCAAGGTTTGTTTGAATCGTCGTCGTCAATTATGACGATTCCGGATTCAGGTTTCATGATGGAGAACGAGGCGAGCTGCTTACCGCACATACCGGAGGAGGAGAAGCGGATCATTGACGAATTGACCCGCCAATCCGAAGCCAATGTTAAAGAAGGCAACTTGTTCTACGTTATTTCTAACAGGTGGTTCTCAAGCTGGAAGATGTATGTTGGACAAGGCACCAGAGAGAATGATAAGTGGGATTCTGAATCCCAACATATGGATCTGCTTTCTTCAAAAATTAACAGACCTGGACCAATTGATAATTCTGATATAGTTGAAAAAGAATCCGAGGGAGGTGGAGGTGATCTACAGCTTCGTAGAATGCTGATGGAAGAGCTTGACTATGTCTTAGTTTCTCAAGAAGTTTGGGAAAAGCTATTTGATTGGTATAAAGGAGGTCCATCATTACCAAGAAAGATGATTTCTCAGGGCGGCATTAATAAGAATTTGATGGTGGAGGTTTACCCATTGTGTCTTAAGATTGTTGATTCTAGAGACAACAGCCAGGCAGTTATCTGGTTAAGCAAAAAGGCTTCTGTCCAGGAGCTTTACGAGAAGGTGCGCACAATTAGAGGAATTGAGCAACAAAAGGCCTGTATCTGGGATTACTTCAACAAGCAGAAGCAGTCGTTATTGACTGCTTCGAACCAAACGTTGGAGCAGTTGAACTTGCAGATGGATCAAGATGTTCTTCTTGAGGTGCAAGTTGATGGAAACTATTCCTCCCAAAGTTCCATGGATTCAACTGGAAATGAGTTAGCATTGGTAACTGTAGAACCATCAAGGTCATCGATGACAATTGCTGGGGGTCCTACTTTGTCGAATGGTCATTCGACGGGTTATAATAATAATGTGCTTCAGGGAAGCACCTTAAGTGGCTCAGCATCAACAGATACAGATGACAGACCTTACGTTTACAATCCAATGAAAAAAGGAGATAAGGGAGGTTTGGCAGGATTGCAGAATCTCGGAAATACTTGCTTTATGAATAGTTCCCTCCAGTGCTTAGTCCATACACCCCCTCTTGTTGATTATTTTTTGCAAGATTACTCTGATGAGATCAACACAGACAATCCCTTAGGGATGCATGGTGAGCTTGCTCTTGCCTTTGGTGAGCTGTTGAGGAAATTGTGGTCCTCTGGGAGAACAACAATTGCTCCACGTGCATTCAAGGGAAAACTTGCTCGATTTGCTCCTCAGTTTAGTGGTTATAATCAGCATGACTCTCAGGAACTTCTTGCTTTCTTACTGGATGGACTGCATGAAGATTTGAATCGTGTCAAAAATAAGCCCTACATTGAAACAAAGGATTCAGATGGTCGTCCGGATGAGGAAGTTGCAGATGAGTGTTGGAAAAATCACAAGGCCCGGAATGATTCATTGATTGTGGATGTTTGCCAAGGTCAATATAAGTCAACTTTGGTATGCCCATCTTGTGCCAAGGTTTCAATTACCTTTGATCCTTTTATGTACTTATCGGTGCCATTACCTTCAACTGTTACTCGGTCAATGACGGTGACTGTACTTTATGGTGATGGACGGGGTCTTCCAATGCCGTACACTGTAACCTTGATAAAAGATCGCTCCGTTAAAGATCTTGTTGAGGCATTGGGGACTGCATGCTGCTTGAAGAGTGATGAAAGCCTTCTGCTTGCTGAGATATACGAGCATCGAATTTATCGATATTTGGAGAGCCCTTCTGAACACTTGTCTTCAATTAAGCCTGATGAACGTATTGTGGCCTATCGGTATTCTAAAGGGGCAGGAACAACCAGACTTGAAATAATGCATCGACGGCAGGAAAAATGTGCATTGGATCCTTTGAAGGGTCAGAGAAAACTTTTTGGAACACCTTTGGTTACTTATCTAGGAGAAGACCAAATAAATGGAGTTGATATTGAAAGAGCTGTTTCTACATCTCTGTCGCCTTTGAGGAGAGCTGTTAAGCTTCATAGTACAAAAGAAAATGGCTCAACTTCAGAAGCTGTTGATGAACCATCAAACAGCTACAATTTGAGGTCCATGGACAATACAGAACTAGAGGAAGCATCTAGCAGGGAGTTATCCTTTCACCTATTTCTAGCCCTTGATGAAAGGGGTCACACATGCAAGCCACTTGAGAAGTTTTCTTCCTTAAAGTCCGGTAAAAATATCAAGGTTTTTCTGGACTGGACTGAGAAAGAAGATGAATCATATGATGCTAGTTACCTGGAGAATCTACCTGAGGTACACAAGTCTGGTAATACTGCAAAGAAAACTCGACAAGAAGCTATTTCCTTATTTACTTGCTTAGAGGCATTCTTGAAGGAAGAACCTTTGGGTCCCTCGGATATGTGGTACTGCCCAAGGTGCAAGGAGCATAGACAGGCTACCAAGAAGCTGGACTTGTGGATGTTGCCAGAGGTTCTGGTTTTTCACTTGAAACGATTCTCATACAGCAGATACTCGAAGAACAAACTCGACAGTTTTGTGACTTTTCCAATTCATAATCTTGATTTAAGTAGATATGTGATGAGCAAGGATGGGAAACCGTATATATATGAACTATATGCCATTAGCAACCATTATGGTGGTCTAGGTGGTGGGCACTACACTGCATATGCGAAGGTATGGCAAAACTCTAGTGTATCTTATCTTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUSP UCH

Protein Analysis

960

Amino Acids

108.5

Weight (kDa)

5.91

Isoelectric Point (pI)

50.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUSP	PF06337	119 - 221	8.1e-22	DUSP domain
UCH	PF00443	398 - 949	1.6e-64	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	398 - 574	7.5e-06	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32850 AT4G10570 AT4G10590 AT4G10590 AT4G10590 AT4G10590
fragaria_vesca	FvH4_5g10610 FvH4_5g10610 FvH4_5g10610
malus_domestica	MD06G1121900.v1.1 MD14G1138300.v1.1
prunus_persica	Prupe.5G132600_v2.0.a1 Prupe.5G132600_v2.0.a1 Prupe.5G132600_v2.0.a1
pyrus_communis	pycom06g11300 pycom14g11340
rosa_chinensis	RchiOBHm_Chr7g0187531
rosa_laevigata	RLG00000004773
rosa_multiflora	Rmu_sc0008640.1_g000004 Rmu_sc0014966.1_g000001 Rmu_sc0023622.1_g000001 Rmu_ssc0000110.1_g000024
rosa_roxburghii	Rroxscaffold_3G00267350
rosa_rugosa	Rorug06G0482500
rosa_samantha	Rh7AG087100 Rh7BG088500 Rh7CG087800 Rh7DG089400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1083, 1452
Acc16I	TGCGCA	1 cut(s)	803
AccB1I	GGYRCC	2 cut(s)	416, 1720
AccB7I	CCANNNNNTGG	2 cut(s)	457, 895
AccII	CGCG	1 cut(s)	184
AccIII	TCCGGA	2 cut(s)	238, 1564
AciI	CCGC	6 cut(s)	47, 182, 281, 304, 325, 672
AclI	AACGTT	1 cut(s)	893
AclWI	GGATC	6 cut(s)	314, 468, 927, 1694, 2051, 2064
AcsI	RAATTY	2 cut(s)	685, 1914
AcuI	CTGAAG	2 cut(s)	1082, 2202
AcvI	CACGTG	1 cut(s)	1403
AfaI	GTAC	6 cut(s)	1712, 1764, 1799, 2197, 2469, 2579
AfiI	CCNNNNNNNGG	6 cut(s)	200, 245, 457, 840, 895, 2066
AflII	CTTAAG	2 cut(s)	716, 1111
AjnI	CCWGG	4 cut(s)	487, 744, 780, 2448
AjuI	GAANNNNNNNTTGG	4 cut(s)	487, 519, 878, 910
Alw26I	GTCTC	1 cut(s)	729
AlwI	GGATC	6 cut(s)	314, 468, 927, 1694, 2051, 2064
AlwNI	CAGNNNCTG	1 cut(s)	2225
Aor13HI	TCCGGA	2 cut(s)	238, 1564
AoxI	GGCC	3 cut(s)	831, 1605, 1980
ApeKI	GCWGC	2 cut(s)	273, 1863
ApoI	RAATTY	2 cut(s)	685, 1914
AseI	ATTAAT	1 cut(s)	678
Asp700I	GAANNNNTTC	3 cut(s)	958, 1884, 2666
AspLEI	GCGC	1 cut(s)	804
AspS9I	GGNCC	7 cut(s)	491, 638, 1049, 1374, 1606, 2259, 2561
AsuC2I	CCSGG	1 cut(s)	1609
AsuHPI	GGTGA	7 cut(s)	109, 554, 1343, 1364, 1768, 1784, 2303
AsuII	TTCGAA	1 cut(s)	884
AvaII	GGWCC	6 cut(s)	491, 638, 1049, 1374, 2259, 2561
AxyI	CCTNAGG	2 cut(s)	1318, 2463
BaeGI	GKGCMC	1 cut(s)	2829
BaeI	ACNNNNGTAYC	2 cut(s)	2459, 2492
BamHI	GGATCC	1 cut(s)	2056
BanI	GGYRCC	2 cut(s)	416, 1720
BanII	GRGCYC	1 cut(s)	1937
BbrPI	CACGTG	1 cut(s)	1403
BbsI	GAAGAC	3 cut(s)	1778, 1944, 2121
BbvI	GCAGC	2 cut(s)	260, 1850
BceAI	ACGGC	2 cut(s)	1780, 2051
BciT130I	CCWGG	4 cut(s)	489, 746, 782, 2450
BciVI	GTATCC	1 cut(s)	19
BcnI	CCSGG	1 cut(s)	1609
BcoDI	GTCTC	1 cut(s)	729
BfmI	CTRYAG	2 cut(s)	548, 1011
BfrI	CTTAAG	2 cut(s)	716, 1111
BfuI	GTATCC	1 cut(s)	19
BglII	AGATCT	1 cut(s)	1834
BisI	GCNGC	3 cut(s)	274, 673, 1864
BlpI	GCTNAGC	1 cut(s)	1120
BlsI	GCNGC	3 cut(s)	275, 674, 1865
Bme1390I	CCNGG	5 cut(s)	489, 746, 782, 1609, 2450
Bme18I	GGWCC	6 cut(s)	491, 638, 1049, 1374, 2259, 2561
BmgT120I	GGNCC	7 cut(s)	491, 638, 1049, 1374, 1606, 2259, 2561
BmiI	GGNNCC	6 cut(s)	418, 1050, 1722, 2058, 2562, 2563
BmrFI	CCNGG	5 cut(s)	489, 746, 782, 1609, 2450
BmsI	GCATC	6 cut(s)	1133, 1314, 1918, 2038, 2297, 2428
BpiI	GAAGAC	3 cut(s)	1778, 1944, 2121
BpmI	CTGGAG	2 cut(s)	1223, 2471
Bpu1102I	GCTNAGC	1 cut(s)	1120
Bpu14I	TTCGAA	1 cut(s)	884
BpuEI	CTTGAG	4 cut(s)	373, 582, 956, 2378
BpuMI	CCSGG	1 cut(s)	1609
Bsa29I	ATCGAT	2 cut(s)	1031, 1921
BsaAI	YACGTR	1 cut(s)	1403
BsaBI	GATNNNNATC	1 cut(s)	1512
BsaJI	CCNNGG	8 cut(s)	199, 528, 975, 1639, 1680, 2262, 2565, 2585
BsaWI	WCCGGW	4 cut(s)	238, 289, 1564, 2381
BsaXI	ACNNNNNCTCC	4 cut(s)	947, 977, 1381, 1411
Bsc4I	CCNNNNNNNGG	6 cut(s)	200, 245, 457, 840, 895, 2066
Bse1I	ACTGG	4 cut(s)	991, 1240, 1494, 2414
Bse21I	CCTNAGG	2 cut(s)	1318, 2463
Bse8I	GATNNNNATC	1 cut(s)	1512
BseAI	TCCGGA	2 cut(s)	238, 1564
BseBI	CCWGG	4 cut(s)	489, 746, 782, 2450
BseCI	ATCGAT	2 cut(s)	1031, 1921
BseDI	CCNNGG	8 cut(s)	199, 528, 975, 1639, 1680, 2262, 2565, 2585
BseGI	GGATG	6 cut(s)	1329, 1498, 1573, 1636, 2637, 2767
BseJI	GATNNNNATC	1 cut(s)	1512
BseLI	CCNNNNNNNGG	6 cut(s)	200, 245, 457, 840, 895, 2066
BseMII	CTCAG	7 cut(s)	680, 1134, 1451, 1481, 1887, 2406, 2454
BseNI	ACTGG	4 cut(s)	991, 1240, 1494, 2414
BseRI	GAGGAG	4 cut(s)	308, 311, 1425, 2188
BseSI	GKGCMC	1 cut(s)	2829
BseXI	GCAGC	2 cut(s)	260, 1850
BseYI	CCCAGC	1 cut(s)	1043
Bsh1236I	CGCG	1 cut(s)	184
BshFI	GGCC	3 cut(s)	833, 1607, 1982
BshNI	GGYRCC	2 cut(s)	416, 1720
BshVI	ATCGAT	2 cut(s)	1031, 1921
BsiSI	CCGG	5 cut(s)	239, 290, 1565, 1609, 2382
BslFI	GGGAC	2 cut(s)	1867, 2547
BslI	CCNNNNNNNGG	6 cut(s)	200, 245, 457, 840, 895, 2066
BsmAI	GTCTC	1 cut(s)	729
BsmFI	GGGAC	2 cut(s)	1867, 2547
BsmI	GAATGC	3 cut(s)	567, 1406, 2537
BsnI	GGCC	3 cut(s)	833, 1607, 1982
Bsp119I	TTCGAA	1 cut(s)	884
Bsp1286I	GDGCHC	2 cut(s)	1937, 2829
Bsp13I	TCCGGA	2 cut(s)	238, 1564
Bsp1720I	GCTNAGC	1 cut(s)	1120
Bsp19I	CCATGG	2 cut(s)	975, 2262
BspACI	CCGC	6 cut(s)	47, 182, 281, 304, 325, 672
BspANI	GGCC	3 cut(s)	833, 1607, 1982
BspCNI	CTCAG	7 cut(s)	679, 1133, 1450, 1480, 1888, 2407, 2455
BspDI	ATCGAT	2 cut(s)	1031, 1921
BspEI	TCCGGA	2 cut(s)	238, 1564
BspFNI	CGCG	1 cut(s)	184
BspHI	TCATGA	2 cut(s)	252, 2879
BspLI	GGNNCC	6 cut(s)	418, 1050, 1722, 2058, 2562, 2563
BspPI	GGATC	6 cut(s)	314, 468, 927, 1694, 2051, 2064
BspQI	GCTCTTC	1 cut(s)	567
BspT104I	TTCGAA	1 cut(s)	884
BspT107I	GGYRCC	2 cut(s)	416, 1720
BspTI	CTTAAG	2 cut(s)	716, 1111
BsrI	ACTGG	4 cut(s)	991, 1240, 1494, 2414
BssECI	CCNNGG	8 cut(s)	199, 528, 975, 1639, 1680, 2262, 2565, 2585
BssT1I	CCWWGG	6 cut(s)	199, 975, 1639, 1680, 2262, 2585
Bst2UI	CCWGG	4 cut(s)	489, 746, 782, 2450
Bst4CI	ACNGT	9 cut(s)	97, 130, 1012, 1738, 1756, 1762, 1804, 2705, 2772
Bst6I	CTCTTC	4 cut(s)	176, 195, 567, 1865
BstAFI	CTTAAG	2 cut(s)	716, 1111
BstBAI	YACGTR	1 cut(s)	1403
BstBI	TTCGAA	1 cut(s)	884
BstC8I	GCNNGC	5 cut(s)	271, 1338, 1861, 1893, 2351
BstDSI	CCRYGG	2 cut(s)	975, 2262
BstF5I	GGATG	6 cut(s)	1329, 1498, 1573, 1636, 2637, 2767
BstFNI	CGCG	1 cut(s)	184
BstHHI	GCGC	1 cut(s)	804
BstMAI	GTCTC	1 cut(s)	729
BstMWI	GCNNNNNNNGC	5 cut(s)	1333, 1403, 1430, 2035, 2589
BstNI	CCWGG	4 cut(s)	489, 746, 782, 2450
BstNSI	RCATGY	2 cut(s)	1863, 2349
BstSCI	CCNGG	5 cut(s)	487, 744, 780, 1607, 2448
BstSFI	CTRYAG	2 cut(s)	548, 1011
BstSLI	GKGCMC	1 cut(s)	2829
BstUI	CGCG	1 cut(s)	184
BstV1I	GCAGC	2 cut(s)	260, 1850
BstV2I	GAAGAC	3 cut(s)	1778, 1944, 2121
BstX2I	RGATCY	3 cut(s)	460, 1834, 2056
BstXI	CCANNNNNNTGG	3 cut(s)	2126, 2620, 2810
BstYI	RGATCY	3 cut(s)	460, 1834, 2056
Bsu15I	ATCGAT	2 cut(s)	1031, 1921
Bsu36I	CCTNAGG	2 cut(s)	1318, 2463
BsuI	GTATCC	1 cut(s)	19
BsuRI	GGCC	3 cut(s)	833, 1607, 1982
BsuTUI	ATCGAT	2 cut(s)	1031, 1921
BtgI	CCRYGG	2 cut(s)	975, 2262
BtsCI	GGATG	6 cut(s)	1329, 1498, 1573, 1636, 2637, 2767
BtsI	GCAGTG	1 cut(s)	2832
BtsIMutI	CAGTG	3 cut(s)	1247, 1800, 2832
Cac8I	GCNNGC	5 cut(s)	271, 1338, 1861, 1893, 2351
CaiI	CAGNNNCTG	1 cut(s)	2225
CciI	TCATGA	2 cut(s)	252, 2879
CfoI	GCGC	1 cut(s)	804
Cfr13I	GGNCC	7 cut(s)	491, 638, 1049, 1374, 1606, 2259, 2561
ClaI	ATCGAT	2 cut(s)	1031, 1921
Csp6I	GTAC	6 cut(s)	1711, 1763, 1798, 2196, 2468, 2578
CviAII	CATG	9 cut(s)	253, 976, 1328, 1460, 1502, 1860, 2263, 2346, 2880
CviQI	GTAC	6 cut(s)	1711, 1763, 1798, 2196, 2468, 2578
Eam1104I	CTCTTC	4 cut(s)	176, 195, 567, 1865
EarI	CTCTTC	4 cut(s)	176, 195, 567, 1865
Eco130I	CCWWGG	6 cut(s)	199, 975, 1639, 1680, 2262, 2585
Eco147I	AGGCCT	1 cut(s)	833
Eco24I	GRGCYC	1 cut(s)	1937
Eco47I	GGWCC	6 cut(s)	491, 638, 1049, 1374, 2259, 2561
Eco57I	CTGAAG	2 cut(s)	1082, 2202
Eco72I	CACGTG	1 cut(s)	1403
Eco81I	CCTNAGG	2 cut(s)	1318, 2463
EcoO109I	RGGNCCY	2 cut(s)	1049, 2561
EcoRII	CCWGG	4 cut(s)	487, 744, 780, 2448
EcoT14I	CCWWGG	6 cut(s)	199, 975, 1639, 1680, 2262, 2585
EcoT22I	ATGCAT	2 cut(s)	1329, 2031
EcoT38I	GRGCYC	1 cut(s)	1937
ErhI	CCWWGG	6 cut(s)	199, 975, 1639, 1680, 2262, 2585
FaeI	CATG	9 cut(s)	256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2883
FalI	AAGNNNNNCTT	4 cut(s)	915, 947, 2609, 2641
FaqI	GGGAC	2 cut(s)	1867, 2547
FatI	CATG	9 cut(s)	252, 975, 1327, 1459, 1501, 1859, 2262, 2345, 2879
FauI	CCCGC	1 cut(s)	332
FauNDI	CATATG	3 cut(s)	456, 2434, 2839
Fnu4HI	GCNGC	3 cut(s)	274, 673, 1864
FokI	GGATG	6 cut(s)	1336, 1505, 1580, 1643, 2644, 2774
FriOI	GRGCYC	1 cut(s)	1937
Fsp4HI	GCNGC	3 cut(s)	274, 673, 1864
FspAI	RTGCGCAY	1 cut(s)	803
FspI	TGCGCA	1 cut(s)	803
GlaI	GCGC	1 cut(s)	803
GluI	GCNGC	3 cut(s)	274, 673, 1864
GsaI	CCCAGC	1 cut(s)	1047
GsuI	CTGGAG	2 cut(s)	1223, 2471
HaeIII	GGCC	3 cut(s)	833, 1607, 1982
HapII	CCGG	5 cut(s)	239, 290, 1565, 1609, 2382
HhaI	GCGC	1 cut(s)	804
Hin1II	CATG	9 cut(s)	256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2883
Hin6I	GCGC	1 cut(s)	802
HinP1I	GCGC	1 cut(s)	802
HincII	GTYRAC	1 cut(s)	1656
HindII	GTYRAC	1 cut(s)	1656
HindIII	AAGCTT	1 cut(s)	2186
HpaII	CCGG	5 cut(s)	239, 290, 1565, 1609, 2382
HphI	GGTGA	7 cut(s)	109, 554, 1343, 1364, 1768, 1784, 2303
Hpy166II	GTNNAC	6 cut(s)	133, 703, 1156, 1656, 1800, 2470
Hpy8I	GTNNAC	6 cut(s)	133, 703, 1156, 1656, 1800, 2470
Hpy99I	CGWCG	6 cut(s)	11, 97, 220, 223, 1078, 2037
HpyCH4III	ACNGT	9 cut(s)	97, 130, 1012, 1738, 1756, 1762, 1804, 2705, 2772
HpyCH4IV	ACGT	6 cut(s)	9, 366, 893, 1152, 1402, 1972
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1333, 1403, 1430, 2035, 2589
HpySE526I	ACGT	6 cut(s)	9, 366, 893, 1152, 1402, 1972
Hsp92II	CATG	9 cut(s)	256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2883
HspAI	GCGC	1 cut(s)	802
KflI	GGGWCCC	1 cut(s)	2561
Kpn2I	TCCGGA	2 cut(s)	238, 1564
LguI	GCTCTTC	1 cut(s)	567
LmnI	GCTCC	7 cut(s)	184, 784, 898, 1402, 1438, 1829, 2596
Lsp1109I	GCAGC	2 cut(s)	260, 1850
LweI	GCATC	6 cut(s)	1133, 1314, 1918, 2038, 2297, 2428
MaeII	ACGT	6 cut(s)	9, 366, 893, 1152, 1402, 1972
MaeIII	GTNAC	8 cut(s)	1006, 1738, 1756, 1804, 2098, 2339, 2444, 2710
MfeI	CAATTG	3 cut(s)	495, 1038, 1392
MflI	RGATCY	3 cut(s)	460, 1834, 2056
MhlI	GDGCHC	2 cut(s)	1937, 2829
MlyI	GAGTC	3 cut(s)	37, 109, 1457
MmeI	TCCRAC	4 cut(s)	137, 388, 876, 1571
Mph1103I	ATGCAT	2 cut(s)	1329, 2031
MroI	TCCGGA	2 cut(s)	238, 1564
MroXI	GAANNNNTTC	3 cut(s)	958, 1884, 2666
MslI	CAYNNNNRTG	1 cut(s)	2808
MspCI	CTTAAG	2 cut(s)	716, 1111
MspI	CCGG	5 cut(s)	239, 290, 1565, 1609, 2382
MspR9I	CCNGG	5 cut(s)	489, 746, 782, 1609, 2450
MunI	CAATTG	3 cut(s)	495, 1038, 1392
Mva1269I	GAATGC	3 cut(s)	567, 1406, 2537
MvaI	CCWGG	4 cut(s)	489, 746, 782, 2450
MvnI	CGCG	1 cut(s)	184
MwoI	GCNNNNNNNGC	5 cut(s)	1333, 1403, 1430, 2035, 2589
NciI	CCSGG	1 cut(s)	1609
NcoI	CCATGG	2 cut(s)	975, 2262
NdeI	CATATG	3 cut(s)	456, 2434, 2839
NlaIII	CATG	9 cut(s)	256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2883
NlaIV	GGNNCC	6 cut(s)	418, 1050, 1722, 2058, 2562, 2563
NmuCI	GTSAC	3 cut(s)	1756, 2339, 2710
NsbI	TGCGCA	1 cut(s)	803
NsiI	ATGCAT	2 cut(s)	1329, 2031
NspI	RCATGY	2 cut(s)	1863, 2349
NspV	TTCGAA	1 cut(s)	884
PaeI	GCATGC	1 cut(s)	1863
PagI	TCATGA	2 cut(s)	252, 2879
PceI	AGGCCT	1 cut(s)	833
PciSI	GCTCTTC	1 cut(s)	567
PcsI	WCGNNNNNNNCGW	3 cut(s)	89, 890, 1918
PctI	GAATGC	3 cut(s)	567, 1406, 2537
PdmI	GAANNNNTTC	3 cut(s)	958, 1884, 2666
PflFI	GACNNNGTC	2 cut(s)	584, 1782
PflMI	CCANNNNNTGG	2 cut(s)	457, 895
PfoI	TCCNGGA	1 cut(s)	780
PkrI	GCNGC	3 cut(s)	275, 674, 1865
PleI	GAGTC	3 cut(s)	37, 109, 1457
PmaCI	CACGTG	1 cut(s)	1403
PmlI	CACGTG	1 cut(s)	1403
PpsI	GAGTC	3 cut(s)	37, 109, 1457
Ppu21I	YACGTR	1 cut(s)	1403
PpuMI	RGGWCCY	2 cut(s)	1049, 2561
PshBI	ATTAAT	1 cut(s)	678
PsiI	TTATAA	2 cut(s)	1083, 1452
Psp1406I	AACGTT	1 cut(s)	893
Psp5II	RGGWCCY	2 cut(s)	1049, 2561
Psp6I	CCWGG	4 cut(s)	487, 744, 780, 2448
PspCI	CACGTG	1 cut(s)	1403
PspFI	CCCAGC	1 cut(s)	1043
PspGI	CCWGG	4 cut(s)	487, 744, 780, 2448
PspN4I	GGNNCC	6 cut(s)	418, 1050, 1722, 2058, 2562, 2563
PspPI	GGNCC	7 cut(s)	491, 638, 1049, 1374, 1606, 2259, 2561
PspPPI	RGGWCCY	2 cut(s)	1049, 2561
PstNI	CAGNNNCTG	1 cut(s)	2225
PsuI	RGATCY	3 cut(s)	460, 1834, 2056
PsyI	GACNNNGTC	2 cut(s)	584, 1782
RsaI	GTAC	6 cut(s)	1712, 1764, 1799, 2197, 2469, 2579
RsaNI	GTAC	6 cut(s)	1711, 1763, 1798, 2196, 2468, 2578
RseI	CAYNNNNRTG	1 cut(s)	2808
SapI	GCTCTTC	1 cut(s)	567
SatI	GCNGC	3 cut(s)	274, 673, 1864
Sau96I	GGNCC	7 cut(s)	491, 638, 1049, 1374, 1606, 2259, 2561
SchI	GAGTC	3 cut(s)	37, 109, 1457
ScrFI	CCNGG	5 cut(s)	489, 746, 782, 1609, 2450
SduI	GDGCHC	2 cut(s)	1937, 2829
SfaNI	GCATC	6 cut(s)	1133, 1314, 1918, 2038, 2297, 2428
SfcI	CTRYAG	2 cut(s)	548, 1011
SfuI	TTCGAA	1 cut(s)	884
SinI	GGWCC	6 cut(s)	491, 638, 1049, 1374, 2259, 2561
SmiMI	CAYNNNNRTG	1 cut(s)	2808
SmlI	CTYRAG	6 cut(s)	388, 597, 716, 935, 1111, 2357
SmoI	CTYRAG	6 cut(s)	388, 597, 716, 935, 1111, 2357
SphI	GCATGC	1 cut(s)	1863
SseBI	AGGCCT	1 cut(s)	833
SsiI	CCGC	6 cut(s)	47, 182, 281, 304, 325, 672
StuI	AGGCCT	1 cut(s)	833
StyD4I	CCNGG	5 cut(s)	487, 744, 780, 1607, 2448
StyI	CCWWGG	6 cut(s)	199, 975, 1639, 1680, 2262, 2585
TaaI	ACNGT	9 cut(s)	97, 130, 1012, 1738, 1756, 1762, 1804, 2705, 2772
TaiI	ACGT	6 cut(s)	12, 369, 896, 1155, 1405, 1975
TaqII	GACCGA	1 cut(s)	1734
TatI	WGTACW	3 cut(s)	1710, 1762, 2195
TauI	GCSGC	1 cut(s)	675
TscAI	CASTG	3 cut(s)	1247, 1807, 2839
TseFI	GTSAC	3 cut(s)	1756, 2339, 2710
TseI	GCWGC	2 cut(s)	273, 1863
Tsp45I	GTSAC	3 cut(s)	1756, 2339, 2710
TspGWI	ACGGA	1 cut(s)	1816
TspRI	CASTG	3 cut(s)	1247, 1807, 2839
Tth111I	GACNNNGTC	2 cut(s)	584, 1782
Van91I	CCANNNNNTGG	2 cut(s)	457, 895
Vha464I	CTTAAG	2 cut(s)	716, 1111
VpaK11BI	GGWCC	6 cut(s)	491, 638, 1049, 1374, 2259, 2561
VspI	ATTAAT	1 cut(s)	678
XapI	RAATTY	2 cut(s)	685, 1914
XbaI	TCTAGA	1 cut(s)	731
XceI	RCATGY	2 cut(s)	1863, 2349
XmnI	GAANNNNTTC	3 cut(s)	958, 1884, 2666
Zsp2I	ATGCAT	2 cut(s)	1329, 2031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.