Rh7AG087100

Ubiquitin carboxyl-terminal hydrolase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
6624520 .. 6631309
6790 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG087100.1

Sequence Viewer

Length: 3012 bp
ATGTGCGACGTAGAGTTTAACTTGGATACATTTTCGCCTCTGACTCCGCAGTTAAAAGAAAAAGAAAAAAAAAGGACTAGATCGTTGAAAACGACGGTGAGAGATTTCTCTCCGACTCCCCCAACTACCGTCCACCTTCAACAATCTAGGGCTTCCTCTCACATTTCTCCCTTCTCTGCTCCGCGATCTCTTCCCTTCCAAGGTTTGTTTGAAACGTCGTCGTCAATTATGACGATTCCGGATTCAGGTTTCATGATGGAGAACGAGGCGAGCTGCTTACCGCACACACCGGAGGAGGAGAAGCGGATCATTGACGAATTGACCCGCCAATCCGAAGCCAATGTTAAAGAAGGCAACTTGTTCTACGTTATTTCTAACAGGTGGTTCTCAAGCTGGAAGATGTATGTTGAACAAGGCACCGGAGAGAATGATAAGTGGGATTCTGAATCCCAACATATGGATCTGCTTTCTTCAAAAATTAACAGACCTGGACCAATTGATAATTCTGATATAGTTGAAAAAGAATCCGAGGGAGGTGGAGGTGATCTACAGCTTCGTAGAATGCTGATGGAAGAGCTTGACTATGTCCTAGTTTCTCAAGAAGTTTGGGAAAAGCTATTTGATTGGTATAAAGGAGGTCCATCATTACCAAGAAAGATGATTTCTCAGGGCGGCATTAATAAGAATTTGATGGTGGAGGTTTACCCATTGTGTCTTAAGATTGTTGATTCTAGAGACAACAGCCAGGCAGTTATCTGGTTAAGCAAAAAGGCTTCTGTCCAGGAGCTTTACGAGAAGGTGTGCACAATTAGAGGAATTGAGCAACAAAAGGCCTGTATCTGGGATTACTTCAACAAGCAGAAGCAGTCATTATTGAATGCTTCGAACCAAACGTTGGAGCAGTTGAACTTGCAGATGGATCAAGATGTTCTTCTTGAGGTACAAGTTGATGGAAACTATTCCTCCCAAATTTCCATGGATTCAACTGGAAATGAGTTAGCATTGGTAACTGTAGAACCATCAAGGTCATCGATGACAATTGCCGGGGGTCCTACTTTGTCGAATGGTCATTCGATGGGTTATAATAATAATGTGCTTCAGGGAAGCACCTTAAGTGGCTCAGCATCAACAGATACAGATGACAGACCTTACGTTTACAATCCAATGAAAAAAGGAGATAAGGGAGGTTTGGCAGGATTGCAGAATCTCGGAAATACTTGCTTTATGAATAGTTCCCTCCAGTGCTTAGTCCATACACCCCCTCTTGTTGATTATTTTTTGCAAGATTACTCTGATGAGATCAACACAGACAATCCCTTGGGGATGCATGGTGAGCTTGCTCTTGCGTTTGGTGAGCTGTTAAGGAAATTGTGGTCCTCTGGGAGAACAACAATTGCTCCACGTGCATTCAAGGGAAAACTTGCTCGATTTGCTCCTCAGTTTAGTGGTTATAATCAGCATGACTCTCAGGAACTTCTTGCTTTCTTACTGGATGGACTGCATGAAGATTTGAATCGTGTCAAAAATAAGCCCTACATTGAAACAAAGGATTCAGATGGTCGTCCGGATGAGGAAGTTGCAGATGAGTGTTGGAAAAATCACAAGGCCCGGAATGATTCATTGATTGTGGATGTTTGCCAAGGTCAATATAAGTCAACTTTGGTATGCCCATCTTGTGCCAAGGTTTCAATTACCTTTGATCCTTTTATGTACTTATCGGTGCCACTACCTTCAACTGTTACTCGGTCAATGACGGTGACTGTACTTTATGGTGATGGACGGGGTCTTCCAATGCCGTACACTGTAACCTTGATAAAAGATCGCTCCGTTAAAGATCTTGTTGAGGCATTGGGGACTGCATGCTGCTTGAAGAGTGATGAAAGCCTTCTGCTTGCTGAGATATACGAGCATCGAATTTATCGATATTTGGAGAGCCCTTCTGAACACTTGTCTTCAATTAAGCCTGATGAACGTATTGTGGCCTATCGGTATTCCAAAGGGGCAGGAACTACCAGACTTGAAATAATGCATCGACGGCAGGAAAAATGTGCATTGGATCCTTTGAAGGGTCAGAGAAAACTTTTTGGAACACCTTTGGTTACTTATCTAGGAGAAGACCAAATAAATGGAGTTGATATTGAAAGAGCTGTTTCTACATCTCTGTTGCCTTTGAGGAGAGCTGTTAAGCTTCATAGTACAAAAGAAAATGGCTCAACTTCAGAAGCTGTTGATGAACCATCAAACAGCTACAATTTGAGGTCCATGGACAATACAGAACTAGAGGAAGCATCTAGCAGGGAGTTATCCTTTCACCTATTTCTCGCCCTTGATGAAAGGGGTCACACATGCAAGCCACTTGAGAAGTTTTCTTCCTTAAAGTCCGGTAAAAATATTAAGGTTTTTCTGGACTGGACTGAGAAAGAAGATGAATCATATGATGCTAGTTACCTGGAGAATCTACCTGAGGTACACAAGTCCGGTAATACTGCAAAGAAAACTCGACAAGAAGCTATTTCCTTATTTACTTGCTTAGAGGCATTCTTGAAGGAAGAACCTTTGGGTCCCTCGGATATGTGGTACTGCCCAAGGTGCAAGGAGCATAGACAGGCTACCAAGAAGCTGGACTTGTGGATGTTGCCAGAGGTTCTGGTTTTTCACTTGAAACGATTCTCATACAGCAGATACTCGAAGAACAAACTCGACAGTTTTGTGACTTTTCCAATTCATAATCTTGATTTGAGTAGATATGTGATGAGCAAGGATGGGAAACCGTATATATATGAGCTATACGCCATTAGCAACCATTATGGTGGTCTAGGTGGTGGGCACTACACTGCATATGCGAAGTTGATTGATGAGAACAGATGGTACCATTTCGATGACAGTCATGTTTCTCCAGTCAGTGAAAGCGACATCAAGACTTCGGCTGCCTATGTGCTTTTTTATCGAAGAGTTAAAAGTGGATCAAATACAGGAGAGGGCGATGCATCAGAGACTCATATGGCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1003

Amino Acids

113.29

Weight (kDa)

5.69

Isoelectric Point (pI)

50.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUSP PF06337 119 - 221 8.7e-22 DUSP domain
UCH PF00443 398 - 982 1.6e-77 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 398 - 574 8e-06 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1083, 1452
Acc65I GGTACC 1 cut(s) 2868
AccB1I GGYRCC 3 cut(s) 416, 1720, 2868
AccB7I CCANNNNNTGG 2 cut(s) 457, 895
AccII CGCG 1 cut(s) 184
AccIII TCCGGA 2 cut(s) 238, 1564
AciI CCGC 6 cut(s) 47, 182, 281, 304, 325, 672
AclI AACGTT 1 cut(s) 893
AclWI GGATC 7 cut(s) 314, 468, 927, 1694, 2051, 2064, 2971
AcsI RAATTY 3 cut(s) 685, 969, 1914
AcuI CTGAAG 2 cut(s) 1082, 2202
AcvI CACGTG 1 cut(s) 1403
AfaI GTAC 8 cut(s) 942, 1712, 1764, 1799, 2197, 2469, 2579, 2870
AfiI CCNNNNNNNGG 6 cut(s) 200, 245, 457, 840, 895, 2066
AflII CTTAAG 2 cut(s) 716, 1111
AjnI CCWGG 4 cut(s) 487, 744, 780, 2448
AjuI GAANNNNNNNTTGG 4 cut(s) 487, 519, 878, 910
Alw21I GWGCWC 1 cut(s) 806
Alw26I GTCTC 2 cut(s) 729, 2987
Alw44I GTGCAC 1 cut(s) 802
AlwI GGATC 7 cut(s) 314, 468, 927, 1694, 2051, 2064, 2971
AlwNI CAGNNNCTG 1 cut(s) 2225
Aor13HI TCCGGA 2 cut(s) 238, 1564
AoxI GGCC 3 cut(s) 831, 1605, 1980
ApaLI GTGCAC 1 cut(s) 802
ApeKI GCWGC 3 cut(s) 273, 1863, 2927
ApoI RAATTY 3 cut(s) 685, 969, 1914
AseI ATTAAT 1 cut(s) 678
Asp700I GAANNNNTTC 3 cut(s) 958, 1884, 2666
Asp718I GGTACC 1 cut(s) 2868
AspS9I GGNCC 7 cut(s) 491, 638, 1049, 1374, 1606, 2259, 2561
AsuC2I CCSGG 2 cut(s) 1045, 1609
AsuHPI GGTGA 7 cut(s) 109, 554, 1343, 1364, 1768, 1784, 2303
AsuII TTCGAA 1 cut(s) 884
AvaII GGWCC 6 cut(s) 491, 638, 1049, 1374, 2259, 2561
AxyI CCTNAGG 1 cut(s) 2463
BaeGI GKGCMC 2 cut(s) 806, 2829
BaeI ACNNNNGTAYC 2 cut(s) 2459, 2492
BamHI GGATCC 1 cut(s) 2056
BanI GGYRCC 3 cut(s) 416, 1720, 2868
BanII GRGCYC 1 cut(s) 1937
BbrPI CACGTG 1 cut(s) 1403
BbsI GAAGAC 3 cut(s) 1778, 1944, 2121
Bbv12I GWGCWC 1 cut(s) 806
BbvI GCAGC 3 cut(s) 260, 1850, 2914
BceAI ACGGC 2 cut(s) 1780, 2051
BciT130I CCWGG 4 cut(s) 489, 746, 782, 2450
BciVI GTATCC 1 cut(s) 19
BcnI CCSGG 2 cut(s) 1045, 1609
BcoDI GTCTC 2 cut(s) 729, 2987
BfaI CTAG 9 cut(s) 78, 147, 590, 732, 2108, 2279, 2292, 2442, 2816
BfmI CTRYAG 2 cut(s) 548, 1011
BfrI CTTAAG 2 cut(s) 716, 1111
BfuI GTATCC 1 cut(s) 19
BglII AGATCT 1 cut(s) 1834
BisI GCNGC 4 cut(s) 274, 673, 1864, 2928
BlpI GCTNAGC 1 cut(s) 1120
BlsI GCNGC 4 cut(s) 275, 674, 1865, 2929
Bme1390I CCNGG 6 cut(s) 489, 746, 782, 1045, 1609, 2450
Bme18I GGWCC 6 cut(s) 491, 638, 1049, 1374, 2259, 2561
BmgT120I GGNCC 7 cut(s) 491, 638, 1049, 1374, 1606, 2259, 2561
BmiI GGNNCC 7 cut(s) 418, 1050, 1722, 2058, 2562, 2563, 2870
BmrFI CCNGG 6 cut(s) 489, 746, 782, 1045, 1609, 2450
BmsI GCATC 8 cut(s) 1133, 1314, 1918, 2038, 2297, 2428, 2974, 2996
BpiI GAAGAC 3 cut(s) 1778, 1944, 2121
BpmI CTGGAG 3 cut(s) 1223, 2471, 2880
Bpu1102I GCTNAGC 1 cut(s) 1120
Bpu14I TTCGAA 1 cut(s) 884
BpuEI CTTGAG 4 cut(s) 373, 582, 956, 2378
BpuMI CCSGG 2 cut(s) 1045, 1609
Bsa29I ATCGAT 2 cut(s) 1031, 1921
BsaAI YACGTR 1 cut(s) 1403
BsaBI GATNNNNATC 1 cut(s) 1512
BsaWI WCCGGW 6 cut(s) 238, 289, 419, 1564, 2381, 2477
BsaXI ACNNNNNCTCC 4 cut(s) 947, 977, 1381, 1411
Bsc4I CCNNNNNNNGG 6 cut(s) 200, 245, 457, 840, 895, 2066
Bse1I ACTGG 5 cut(s) 991, 1240, 1494, 2414, 2897
Bse21I CCTNAGG 1 cut(s) 2463
Bse8I GATNNNNATC 1 cut(s) 1512
BseAI TCCGGA 2 cut(s) 238, 1564
BseBI CCWGG 4 cut(s) 489, 746, 782, 2450
BseCI ATCGAT 2 cut(s) 1031, 1921
BseGI GGATG 6 cut(s) 1329, 1498, 1573, 1636, 2637, 2767
BseJI GATNNNNATC 1 cut(s) 1512
BseLI CCNNNNNNNGG 6 cut(s) 200, 245, 457, 840, 895, 2066
BseMII CTCAG 7 cut(s) 680, 1134, 1451, 1481, 1887, 2406, 2454
BseNI ACTGG 5 cut(s) 991, 1240, 1494, 2414, 2897
BseRI GAGGAG 4 cut(s) 308, 311, 1425, 2188
BseSI GKGCMC 2 cut(s) 806, 2829
BseXI GCAGC 3 cut(s) 260, 1850, 2914
Bsh1236I CGCG 1 cut(s) 184
BshFI GGCC 3 cut(s) 833, 1607, 1982
BshNI GGYRCC 3 cut(s) 416, 1720, 2868
BshVI ATCGAT 2 cut(s) 1031, 1921
BsiHKAI GWGCWC 1 cut(s) 806
BsiSI CCGG 8 cut(s) 239, 290, 420, 1044, 1565, 1609, 2382, 2478
BslFI GGGAC 2 cut(s) 1867, 2547
BslI CCNNNNNNNGG 6 cut(s) 200, 245, 457, 840, 895, 2066
BsmAI GTCTC 2 cut(s) 729, 2987
BsmFI GGGAC 2 cut(s) 1867, 2547
BsmI GAATGC 4 cut(s) 567, 883, 1406, 2537
BsnI GGCC 3 cut(s) 833, 1607, 1982
Bsp119I TTCGAA 1 cut(s) 884
Bsp1286I GDGCHC 3 cut(s) 806, 1937, 2829
Bsp13I TCCGGA 2 cut(s) 238, 1564
Bsp1720I GCTNAGC 1 cut(s) 1120
Bsp19I CCATGG 2 cut(s) 975, 2262
BspACI CCGC 6 cut(s) 47, 182, 281, 304, 325, 672
BspANI GGCC 3 cut(s) 833, 1607, 1982
BspCNI CTCAG 7 cut(s) 679, 1133, 1450, 1480, 1888, 2407, 2455
BspDI ATCGAT 2 cut(s) 1031, 1921
BspEI TCCGGA 2 cut(s) 238, 1564
BspFNI CGCG 1 cut(s) 184
BspHI TCATGA 1 cut(s) 252
BspLI GGNNCC 7 cut(s) 418, 1050, 1722, 2058, 2562, 2563, 2870
BspPI GGATC 7 cut(s) 314, 468, 927, 1694, 2051, 2064, 2971
BspQI GCTCTTC 1 cut(s) 567
BspT104I TTCGAA 1 cut(s) 884
BspT107I GGYRCC 3 cut(s) 416, 1720, 2868
BspTI CTTAAG 2 cut(s) 716, 1111
BsrI ACTGG 5 cut(s) 991, 1240, 1494, 2414, 2897
BssT1I CCWWGG 7 cut(s) 199, 975, 1317, 1639, 1680, 2262, 2585
Bst2UI CCWGG 4 cut(s) 489, 746, 782, 2450
Bst6I CTCTTC 4 cut(s) 195, 567, 1865, 2944
BstAFI CTTAAG 2 cut(s) 716, 1111
BstBAI YACGTR 1 cut(s) 1403
BstBI TTCGAA 1 cut(s) 884
BstC8I GCNNGC 5 cut(s) 271, 1338, 1861, 1893, 2351
BstDEI CTNAG 9 cut(s) 666, 1120, 1246, 1437, 1467, 1896, 2415, 2463, 2530
BstDSI CCRYGG 2 cut(s) 975, 2262
BstF5I GGATG 6 cut(s) 1329, 1498, 1573, 1636, 2637, 2767
BstFNI CGCG 1 cut(s) 184
BstMAI GTCTC 2 cut(s) 729, 2987
BstMWI GCNNNNNNNGC 5 cut(s) 1333, 1403, 1430, 2035, 2589
BstNI CCWGG 4 cut(s) 489, 746, 782, 2450
BstNSI RCATGY 2 cut(s) 1863, 2349
BstSCI CCNGG 6 cut(s) 487, 744, 780, 1043, 1607, 2448
BstSFI CTRYAG 2 cut(s) 548, 1011
BstSLI GKGCMC 2 cut(s) 806, 2829
BstUI CGCG 1 cut(s) 184
BstV1I GCAGC 3 cut(s) 260, 1850, 2914
BstV2I GAAGAC 3 cut(s) 1778, 1944, 2121
BstX2I RGATCY 3 cut(s) 460, 1834, 2056
BstXI CCANNNNNNTGG 3 cut(s) 2126, 2620, 2810
BstYI RGATCY 3 cut(s) 460, 1834, 2056
Bsu15I ATCGAT 2 cut(s) 1031, 1921
Bsu36I CCTNAGG 1 cut(s) 2463
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 3 cut(s) 833, 1607, 1982
BsuTUI ATCGAT 2 cut(s) 1031, 1921
BtgI CCRYGG 2 cut(s) 975, 2262
BtgZI GCGATG 1 cut(s) 2997
BtsCI GGATG 6 cut(s) 1329, 1498, 1573, 1636, 2637, 2767
BtsI GCAGTG 1 cut(s) 2832
BtsIMutI CAGTG 4 cut(s) 1247, 1800, 2832, 2908
Cac8I GCNNGC 5 cut(s) 271, 1338, 1861, 1893, 2351
CaiI CAGNNNCTG 1 cut(s) 2225
CciI TCATGA 1 cut(s) 252
Cfr13I GGNCC 7 cut(s) 491, 638, 1049, 1374, 1606, 2259, 2561
ClaI ATCGAT 2 cut(s) 1031, 1921
Csp6I GTAC 8 cut(s) 941, 1711, 1763, 1798, 2196, 2468, 2578, 2869
CviAII CATG 9 cut(s) 253, 976, 1328, 1460, 1502, 1860, 2263, 2346, 2888
CviQI GTAC 8 cut(s) 941, 1711, 1763, 1798, 2196, 2468, 2578, 2869
DdeI CTNAG 9 cut(s) 666, 1120, 1246, 1437, 1467, 1896, 2415, 2463, 2530
Eam1104I CTCTTC 4 cut(s) 195, 567, 1865, 2944
EarI CTCTTC 4 cut(s) 195, 567, 1865, 2944
Eco130I CCWWGG 7 cut(s) 199, 975, 1317, 1639, 1680, 2262, 2585
Eco147I AGGCCT 1 cut(s) 833
Eco24I GRGCYC 1 cut(s) 1937
Eco47I GGWCC 6 cut(s) 491, 638, 1049, 1374, 2259, 2561
Eco57I CTGAAG 2 cut(s) 1082, 2202
Eco72I CACGTG 1 cut(s) 1403
Eco81I CCTNAGG 1 cut(s) 2463
EcoO109I RGGNCCY 2 cut(s) 1049, 2561
EcoRII CCWGG 4 cut(s) 487, 744, 780, 2448
EcoT14I CCWWGG 7 cut(s) 199, 975, 1317, 1639, 1680, 2262, 2585
EcoT22I ATGCAT 3 cut(s) 1329, 2031, 2989
EcoT38I GRGCYC 1 cut(s) 1937
ErhI CCWWGG 7 cut(s) 199, 975, 1317, 1639, 1680, 2262, 2585
FaeI CATG 9 cut(s) 256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2891
FalI AAGNNNNNCTT 4 cut(s) 915, 947, 2609, 2641
FaqI GGGAC 2 cut(s) 1867, 2547
FatI CATG 9 cut(s) 252, 975, 1327, 1459, 1501, 1859, 2262, 2345, 2887
FauI CCCGC 1 cut(s) 332
FauNDI CATATG 4 cut(s) 456, 2434, 2839, 3000
Fnu4HI GCNGC 4 cut(s) 274, 673, 1864, 2928
FokI GGATG 6 cut(s) 1336, 1505, 1580, 1643, 2644, 2774
FriOI GRGCYC 1 cut(s) 1937
Fsp4HI GCNGC 4 cut(s) 274, 673, 1864, 2928
FspBI CTAG 9 cut(s) 78, 147, 590, 732, 2108, 2279, 2292, 2442, 2816
GluI GCNGC 4 cut(s) 274, 673, 1864, 2928
GsuI CTGGAG 3 cut(s) 1223, 2471, 2880
HaeIII GGCC 3 cut(s) 833, 1607, 1982
HapII CCGG 8 cut(s) 239, 290, 420, 1044, 1565, 1609, 2382, 2478
Hin1II CATG 9 cut(s) 256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2891
HincII GTYRAC 1 cut(s) 1656
HindII GTYRAC 1 cut(s) 1656
HindIII AAGCTT 1 cut(s) 2186
HpaII CCGG 8 cut(s) 239, 290, 420, 1044, 1565, 1609, 2382, 2478
HphI GGTGA 7 cut(s) 109, 554, 1343, 1364, 1768, 1784, 2303
Hpy166II GTNNAC 7 cut(s) 133, 703, 804, 1156, 1656, 1800, 2470
Hpy8I GTNNAC 7 cut(s) 133, 703, 804, 1156, 1656, 1800, 2470
Hpy99I CGWCG 5 cut(s) 11, 97, 220, 223, 2037
HpyCH4IV ACGT 7 cut(s) 9, 215, 366, 893, 1152, 1402, 1972
HpyF10VI GCNNNNNNNGC 5 cut(s) 1333, 1403, 1430, 2035, 2589
HpyF3I CTNAG 9 cut(s) 666, 1120, 1246, 1437, 1467, 1896, 2415, 2463, 2530
HpySE526I ACGT 7 cut(s) 9, 215, 366, 893, 1152, 1402, 1972
Hsp92II CATG 9 cut(s) 256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2891
KflI GGGWCCC 1 cut(s) 2561
Kpn2I TCCGGA 2 cut(s) 238, 1564
KpnI GGTACC 1 cut(s) 2872
LguI GCTCTTC 1 cut(s) 567
LmnI GCTCC 7 cut(s) 184, 784, 898, 1402, 1438, 1829, 2596
Lsp1109I GCAGC 3 cut(s) 260, 1850, 2914
LweI GCATC 8 cut(s) 1133, 1314, 1918, 2038, 2297, 2428, 2974, 2996
MaeI CTAG 9 cut(s) 78, 147, 590, 732, 2108, 2279, 2292, 2442, 2816
MaeII ACGT 7 cut(s) 9, 215, 366, 893, 1152, 1402, 1972
MaeIII GTNAC 8 cut(s) 1006, 1738, 1756, 1804, 2098, 2339, 2444, 2710
MfeI CAATTG 3 cut(s) 495, 1038, 1392
MflI RGATCY 3 cut(s) 460, 1834, 2056
MhlI GDGCHC 3 cut(s) 806, 1937, 2829
MlyI GAGTC 4 cut(s) 37, 109, 1457, 2989
MmeI TCCRAC 3 cut(s) 137, 876, 1571
Mph1103I ATGCAT 3 cut(s) 1329, 2031, 2989
MroI TCCGGA 2 cut(s) 238, 1564
MroXI GAANNNNTTC 3 cut(s) 958, 1884, 2666
MslI CAYNNNNRTG 2 cut(s) 2808, 2877
MspCI CTTAAG 2 cut(s) 716, 1111
MspI CCGG 8 cut(s) 239, 290, 420, 1044, 1565, 1609, 2382, 2478
MspR9I CCNGG 6 cut(s) 489, 746, 782, 1045, 1609, 2450
MunI CAATTG 3 cut(s) 495, 1038, 1392
Mva1269I GAATGC 4 cut(s) 567, 883, 1406, 2537
MvaI CCWGG 4 cut(s) 489, 746, 782, 2450
MvnI CGCG 1 cut(s) 184
MwoI GCNNNNNNNGC 5 cut(s) 1333, 1403, 1430, 2035, 2589
NciI CCSGG 2 cut(s) 1045, 1609
NcoI CCATGG 2 cut(s) 975, 2262
NdeI CATATG 4 cut(s) 456, 2434, 2839, 3000
NlaIII CATG 9 cut(s) 256, 979, 1331, 1463, 1505, 1863, 2266, 2349, 2891
NlaIV GGNNCC 7 cut(s) 418, 1050, 1722, 2058, 2562, 2563, 2870
NmuCI GTSAC 3 cut(s) 1756, 2339, 2710
NsiI ATGCAT 3 cut(s) 1329, 2031, 2989
NspI RCATGY 2 cut(s) 1863, 2349
NspV TTCGAA 1 cut(s) 884
PaeI GCATGC 1 cut(s) 1863
PagI TCATGA 1 cut(s) 252
PceI AGGCCT 1 cut(s) 833
PciSI GCTCTTC 1 cut(s) 567
PcsI WCGNNNNNNNCGW 3 cut(s) 89, 890, 1918
PctI GAATGC 4 cut(s) 567, 883, 1406, 2537
PdmI GAANNNNTTC 3 cut(s) 958, 1884, 2666
PflFI GACNNNGTC 2 cut(s) 584, 1782
PflMI CCANNNNNTGG 2 cut(s) 457, 895
PfoI TCCNGGA 1 cut(s) 780
PkrI GCNGC 4 cut(s) 275, 674, 1865, 2929
PleI GAGTC 4 cut(s) 37, 109, 1457, 2989
PmaCI CACGTG 1 cut(s) 1403
PmlI CACGTG 1 cut(s) 1403
PpsI GAGTC 4 cut(s) 37, 109, 1457, 2989
Ppu21I YACGTR 1 cut(s) 1403
PpuMI RGGWCCY 2 cut(s) 1049, 2561
PshBI ATTAAT 1 cut(s) 678
PsiI TTATAA 2 cut(s) 1083, 1452
Psp1406I AACGTT 1 cut(s) 893
Psp5II RGGWCCY 2 cut(s) 1049, 2561
Psp6I CCWGG 4 cut(s) 487, 744, 780, 2448
PspCI CACGTG 1 cut(s) 1403
PspGI CCWGG 4 cut(s) 487, 744, 780, 2448
PspN4I GGNNCC 7 cut(s) 418, 1050, 1722, 2058, 2562, 2563, 2870
PspPI GGNCC 7 cut(s) 491, 638, 1049, 1374, 1606, 2259, 2561
PspPPI RGGWCCY 2 cut(s) 1049, 2561
PsrI GAACNNNNNNTAC 2 cut(s) 2852, 2884
PstNI CAGNNNCTG 1 cut(s) 2225
PsuI RGATCY 3 cut(s) 460, 1834, 2056
PsyI GACNNNGTC 2 cut(s) 584, 1782
RsaI GTAC 8 cut(s) 942, 1712, 1764, 1799, 2197, 2469, 2579, 2870
RsaNI GTAC 8 cut(s) 941, 1711, 1763, 1798, 2196, 2468, 2578, 2869
RseI CAYNNNNRTG 2 cut(s) 2808, 2877
SapI GCTCTTC 1 cut(s) 567
SatI GCNGC 4 cut(s) 274, 673, 1864, 2928
Sau96I GGNCC 7 cut(s) 491, 638, 1049, 1374, 1606, 2259, 2561
SchI GAGTC 4 cut(s) 37, 109, 1457, 2989
ScrFI CCNGG 6 cut(s) 489, 746, 782, 1045, 1609, 2450
SduI GDGCHC 3 cut(s) 806, 1937, 2829
SfaNI GCATC 8 cut(s) 1133, 1314, 1918, 2038, 2297, 2428, 2974, 2996
SfcI CTRYAG 2 cut(s) 548, 1011
SfuI TTCGAA 1 cut(s) 884
SinI GGWCC 6 cut(s) 491, 638, 1049, 1374, 2259, 2561
SmiMI CAYNNNNRTG 2 cut(s) 2808, 2877
SmlI CTYRAG 6 cut(s) 388, 597, 716, 935, 1111, 2357
SmoI CTYRAG 6 cut(s) 388, 597, 716, 935, 1111, 2357
SphI GCATGC 1 cut(s) 1863
SseBI AGGCCT 1 cut(s) 833
SsiI CCGC 6 cut(s) 47, 182, 281, 304, 325, 672
SspI AATATT 1 cut(s) 2392
SspMI CTAG 9 cut(s) 78, 147, 590, 732, 2108, 2279, 2292, 2442, 2816
StuI AGGCCT 1 cut(s) 833
StyD4I CCNGG 6 cut(s) 487, 744, 780, 1043, 1607, 2448
StyI CCWWGG 7 cut(s) 199, 975, 1317, 1639, 1680, 2262, 2585
TaiI ACGT 7 cut(s) 12, 218, 369, 896, 1155, 1405, 1975
TaqII GACCGA 1 cut(s) 1734
TatI WGTACW 3 cut(s) 1710, 1762, 2195
TauI GCSGC 1 cut(s) 675
TscAI CASTG 4 cut(s) 1247, 1807, 2839, 2908
TseFI GTSAC 3 cut(s) 1756, 2339, 2710
TseI GCWGC 3 cut(s) 273, 1863, 2927
Tsp45I GTSAC 3 cut(s) 1756, 2339, 2710
TspGWI ACGGA 1 cut(s) 1816
TspRI CASTG 4 cut(s) 1247, 1807, 2839, 2908
Tth111I GACNNNGTC 2 cut(s) 584, 1782
Van91I CCANNNNNTGG 2 cut(s) 457, 895
Vha464I CTTAAG 2 cut(s) 716, 1111
VneI GTGCAC 1 cut(s) 802
VpaK11BI GGWCC 6 cut(s) 491, 638, 1049, 1374, 2259, 2561
VspI ATTAAT 1 cut(s) 678
XapI RAATTY 3 cut(s) 685, 969, 1914
XbaI TCTAGA 1 cut(s) 731
XceI RCATGY 2 cut(s) 1863, 2349
XmnI GAANNNNTTC 3 cut(s) 958, 1884, 2666
XspI CTAG 9 cut(s) 78, 147, 590, 732, 2108, 2279, 2292, 2442, 2816
Zsp2I ATGCAT 3 cut(s) 1329, 2031, 2989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.