Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32850 AT4G10570 AT4G10590 AT4G10590 AT4G10590 AT4G10590 |
| fragaria_vesca | FvH4_5g10610 FvH4_5g10610 FvH4_5g10610 |
| malus_domestica | MD06G1121900.v1.1 MD14G1138300.v1.1 |
| prunus_persica | Prupe.5G132600_v2.0.a1 Prupe.5G132600_v2.0.a1 Prupe.5G132600_v2.0.a1 |
| pyrus_communis | pycom06g11300 pycom14g11340 |
| rosa_chinensis | RchiOBHm_Chr7g0187531 |
| rosa_laevigata | RLG00000004773 |
| rosa_multiflora | Rmu_sc0008640.1_g000004 Rmu_sc0014966.1_g000001 Rmu_sc0023622.1_g000001 Rmu_ssc0000110.1_g000024 |
| rosa_roxburghii | Rroxscaffold_3G00267350 |
| rosa_rugosa | Rorug06G0482500 |
| rosa_samantha | Rh7AG087100 Rh7BG088500 Rh7CG087800 Rh7DG089400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 717, 1086 |
| AccB1I | GGYRCC | 2 cut(s) | 17, 1354 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 58, 529 |
| AccIII | TCCGGA | 1 cut(s) | 1198 |
| AciI | CCGC | 1 cut(s) | 273 |
| AclI | AACGTT | 1 cut(s) | 527 |
| AclWI | GGATC | 3 cut(s) | 69, 561, 1328 |
| AcsI | RAATTY | 2 cut(s) | 286, 603 |
| AcuI | CTGAAG | 1 cut(s) | 716 |
| AcvI | CACGTG | 1 cut(s) | 1037 |
| AfaI | GTAC | 4 cut(s) | 576, 1346, 1398, 1433 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 58, 403, 474, 529 |
| AflII | CTTAAG | 2 cut(s) | 317, 745 |
| AjnI | CCWGG | 2 cut(s) | 345, 414 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 88, 120, 512, 544 |
| AluBI | AGCT | 6 cut(s) | 154, 178, 217, 421, 970, 991 |
| AluI | AGCT | 6 cut(s) | 154, 178, 217, 421, 970, 991 |
| Alw21I | GWGCWC | 1 cut(s) | 440 |
| Alw26I | GTCTC | 1 cut(s) | 330 |
| Alw44I | GTGCAC | 1 cut(s) | 436 |
| AlwI | GGATC | 3 cut(s) | 69, 561, 1328 |
| Aor13HI | TCCGGA | 1 cut(s) | 1198 |
| AoxI | GGCC | 2 cut(s) | 465, 1239 |
| ApaLI | GTGCAC | 1 cut(s) | 436 |
| ApeKI | GCWGC | 1 cut(s) | 1497 |
| ApoI | RAATTY | 2 cut(s) | 286, 603 |
| AseI | ATTAAT | 1 cut(s) | 279 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 592, 1518 |
| AspS9I | GGNCC | 5 cut(s) | 92, 239, 683, 1008, 1240 |
| AsuC2I | CCSGG | 2 cut(s) | 679, 1243 |
| AsuHPI | GGTGA | 5 cut(s) | 155, 977, 998, 1402, 1418 |
| AsuII | TTCGAA | 1 cut(s) | 518 |
| AvaII | GGWCC | 4 cut(s) | 92, 239, 683, 1008 |
| BaeGI | GKGCMC | 1 cut(s) | 440 |
| BanI | GGYRCC | 2 cut(s) | 17, 1354 |
| BbrPI | CACGTG | 1 cut(s) | 1037 |
| BbsI | GAAGAC | 1 cut(s) | 1412 |
| Bbv12I | GWGCWC | 1 cut(s) | 440 |
| BbvI | GCAGC | 1 cut(s) | 1484 |
| BceAI | ACGGC | 1 cut(s) | 1414 |
| BciT130I | CCWGG | 2 cut(s) | 347, 416 |
| BcnI | CCSGG | 2 cut(s) | 679, 1243 |
| BcoDI | GTCTC | 1 cut(s) | 330 |
| BfaI | CTAG | 2 cut(s) | 191, 333 |
| BfmI | CTRYAG | 2 cut(s) | 149, 645 |
| BfrI | CTTAAG | 2 cut(s) | 317, 745 |
| BglII | AGATCT | 2 cut(s) | 86, 1468 |
| BisI | GCNGC | 2 cut(s) | 274, 1498 |
| BlpI | GCTNAGC | 1 cut(s) | 754 |
| BlsI | GCNGC | 2 cut(s) | 275, 1499 |
| Bme1390I | CCNGG | 4 cut(s) | 347, 416, 679, 1243 |
| Bme18I | GGWCC | 4 cut(s) | 92, 239, 683, 1008 |
| BmgT120I | GGNCC | 5 cut(s) | 92, 239, 683, 1008, 1240 |
| BmiI | GGNNCC | 3 cut(s) | 19, 684, 1356 |
| BmrFI | CCNGG | 4 cut(s) | 347, 416, 679, 1243 |
| BmsI | GCATC | 2 cut(s) | 767, 948 |
| BpiI | GAAGAC | 1 cut(s) | 1412 |
| BpmI | CTGGAG | 1 cut(s) | 857 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 754 |
| Bpu14I | TTCGAA | 1 cut(s) | 518 |
| BpuEI | CTTGAG | 2 cut(s) | 183, 590 |
| BpuMI | CCSGG | 2 cut(s) | 679, 1243 |
| Bsa29I | ATCGAT | 1 cut(s) | 665 |
| BsaAI | YACGTR | 1 cut(s) | 1037 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1146 |
| BsaJI | CCNNGG | 6 cut(s) | 129, 609, 678, 951, 1273, 1314 |
| BsaWI | WCCGGW | 2 cut(s) | 20, 1198 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 581, 611, 1015, 1045 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 58, 403, 474, 529 |
| Bse1I | ACTGG | 3 cut(s) | 625, 874, 1128 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1146 |
| BseAI | TCCGGA | 1 cut(s) | 1198 |
| BseBI | CCWGG | 2 cut(s) | 347, 416 |
| BseCI | ATCGAT | 1 cut(s) | 665 |
| BseDI | CCNNGG | 6 cut(s) | 129, 609, 678, 951, 1273, 1314 |
| BseGI | GGATG | 4 cut(s) | 963, 1132, 1207, 1270 |
| BseJI | GATNNNNATC | 1 cut(s) | 1146 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 58, 403, 474, 529 |
| BseMII | CTCAG | 5 cut(s) | 281, 768, 1085, 1115, 1521 |
| BseNI | ACTGG | 3 cut(s) | 625, 874, 1128 |
| BseRI | GAGGAG | 1 cut(s) | 1059 |
| BseSI | GKGCMC | 1 cut(s) | 440 |
| BseXI | GCAGC | 1 cut(s) | 1484 |
| BshFI | GGCC | 2 cut(s) | 467, 1241 |
| BshNI | GGYRCC | 2 cut(s) | 17, 1354 |
| BshVI | ATCGAT | 1 cut(s) | 665 |
| BsiHKAI | GWGCWC | 1 cut(s) | 440 |
| BsiSI | CCGG | 4 cut(s) | 21, 678, 1199, 1243 |
| BslFI | GGGAC | 1 cut(s) | 1501 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 58, 403, 474, 529 |
| BsmAI | GTCTC | 1 cut(s) | 330 |
| BsmFI | GGGAC | 1 cut(s) | 1501 |
| BsmI | GAATGC | 4 cut(s) | 168, 379, 517, 1040 |
| BsnI | GGCC | 2 cut(s) | 467, 1241 |
| Bsp119I | TTCGAA | 1 cut(s) | 518 |
| Bsp1286I | GDGCHC | 1 cut(s) | 440 |
| Bsp13I | TCCGGA | 1 cut(s) | 1198 |
| Bsp143I | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 754 |
| Bsp19I | CCATGG | 1 cut(s) | 609 |
| BspACI | CCGC | 1 cut(s) | 273 |
| BspANI | GGCC | 2 cut(s) | 467, 1241 |
| BspCNI | CTCAG | 5 cut(s) | 280, 767, 1084, 1114, 1522 |
| BspDI | ATCGAT | 1 cut(s) | 665 |
| BspEI | TCCGGA | 1 cut(s) | 1198 |
| BspLI | GGNNCC | 3 cut(s) | 19, 684, 1356 |
| BspPI | GGATC | 3 cut(s) | 69, 561, 1328 |
| BspQI | GCTCTTC | 1 cut(s) | 168 |
| BspT104I | TTCGAA | 1 cut(s) | 518 |
| BspT107I | GGYRCC | 2 cut(s) | 17, 1354 |
| BspTI | CTTAAG | 2 cut(s) | 317, 745 |
| BsrI | ACTGG | 3 cut(s) | 625, 874, 1128 |
| BssECI | CCNNGG | 6 cut(s) | 129, 609, 678, 951, 1273, 1314 |
| BssMI | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| BssT1I | CCWWGG | 4 cut(s) | 609, 951, 1273, 1314 |
| Bst2UI | CCWGG | 2 cut(s) | 347, 416 |
| Bst4CI | ACNGT | 5 cut(s) | 646, 1372, 1390, 1396, 1438 |
| Bst6I | CTCTTC | 2 cut(s) | 168, 1499 |
| BstAFI | CTTAAG | 2 cut(s) | 317, 745 |
| BstBAI | YACGTR | 1 cut(s) | 1037 |
| BstBI | TTCGAA | 1 cut(s) | 518 |
| BstC8I | GCNNGC | 3 cut(s) | 972, 1495, 1527 |
| BstDEI | CTNAG | 6 cut(s) | 267, 754, 880, 1071, 1101, 1530 |
| BstDSI | CCRYGG | 1 cut(s) | 609 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 401 |
| BstF5I | GGATG | 4 cut(s) | 963, 1132, 1207, 1270 |
| BstKTI | GATC | 9 cut(s) | 64, 89, 148, 556, 936, 1336, 1382, 1456, 1471 |
| BstMAI | GTCTC | 1 cut(s) | 330 |
| BstMBI | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 967, 1037, 1064 |
| BstNI | CCWGG | 2 cut(s) | 347, 416 |
| BstNSI | RCATGY | 1 cut(s) | 1497 |
| BstSCI | CCNGG | 4 cut(s) | 345, 414, 677, 1241 |
| BstSFI | CTRYAG | 2 cut(s) | 149, 645 |
| BstSLI | GKGCMC | 1 cut(s) | 440 |
| BstV1I | GCAGC | 1 cut(s) | 1484 |
| BstV2I | GAAGAC | 1 cut(s) | 1412 |
| BstX2I | RGATCY | 3 cut(s) | 61, 86, 1468 |
| BstYI | RGATCY | 3 cut(s) | 61, 86, 1468 |
| Bsu15I | ATCGAT | 1 cut(s) | 665 |
| BsuRI | GGCC | 2 cut(s) | 467, 1241 |
| BsuTUI | ATCGAT | 1 cut(s) | 665 |
| BtgI | CCRYGG | 1 cut(s) | 609 |
| BtsCI | GGATG | 4 cut(s) | 963, 1132, 1207, 1270 |
| BtsIMutI | CAGTG | 2 cut(s) | 881, 1434 |
| Cac8I | GCNNGC | 3 cut(s) | 972, 1495, 1527 |
| Cfr13I | GGNCC | 5 cut(s) | 92, 239, 683, 1008, 1240 |
| ClaI | ATCGAT | 1 cut(s) | 665 |
| Csp6I | GTAC | 4 cut(s) | 575, 1345, 1397, 1432 |
| CviAII | CATG | 5 cut(s) | 610, 962, 1094, 1136, 1494 |
| CviQI | GTAC | 4 cut(s) | 575, 1345, 1397, 1432 |
| DdeI | CTNAG | 6 cut(s) | 267, 754, 880, 1071, 1101, 1530 |
| DpnI | GATC | 9 cut(s) | 63, 88, 147, 555, 935, 1335, 1381, 1455, 1470 |
| DpnII | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| Eam1104I | CTCTTC | 2 cut(s) | 168, 1499 |
| EarI | CTCTTC | 2 cut(s) | 168, 1499 |
| Eco130I | CCWWGG | 4 cut(s) | 609, 951, 1273, 1314 |
| Eco147I | AGGCCT | 1 cut(s) | 467 |
| Eco47I | GGWCC | 4 cut(s) | 92, 239, 683, 1008 |
| Eco57I | CTGAAG | 1 cut(s) | 716 |
| Eco72I | CACGTG | 1 cut(s) | 1037 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 401 |
| EcoO109I | RGGNCCY | 1 cut(s) | 683 |
| EcoRII | CCWGG | 2 cut(s) | 345, 414 |
| EcoT14I | CCWWGG | 4 cut(s) | 609, 951, 1273, 1314 |
| EcoT22I | ATGCAT | 1 cut(s) | 963 |
| ErhI | CCWWGG | 4 cut(s) | 609, 951, 1273, 1314 |
| FaeI | CATG | 5 cut(s) | 613, 965, 1097, 1139, 1497 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 549, 581 |
| FaqI | GGGAC | 1 cut(s) | 1501 |
| FatI | CATG | 5 cut(s) | 609, 961, 1093, 1135, 1493 |
| FauNDI | CATATG | 1 cut(s) | 57 |
| Fnu4HI | GCNGC | 2 cut(s) | 274, 1498 |
| FokI | GGATG | 4 cut(s) | 970, 1139, 1214, 1277 |
| Fsp4HI | GCNGC | 2 cut(s) | 274, 1498 |
| FspBI | CTAG | 2 cut(s) | 191, 333 |
| GluI | GCNGC | 2 cut(s) | 274, 1498 |
| GsuI | CTGGAG | 1 cut(s) | 857 |
| HaeIII | GGCC | 2 cut(s) | 467, 1241 |
| HapII | CCGG | 4 cut(s) | 21, 678, 1199, 1243 |
| Hin1II | CATG | 5 cut(s) | 613, 965, 1097, 1139, 1497 |
| HincII | GTYRAC | 1 cut(s) | 1290 |
| HindII | GTYRAC | 1 cut(s) | 1290 |
| HpaII | CCGG | 4 cut(s) | 21, 678, 1199, 1243 |
| HphI | GGTGA | 5 cut(s) | 155, 977, 998, 1402, 1418 |
| Hpy166II | GTNNAC | 5 cut(s) | 304, 438, 790, 1290, 1434 |
| Hpy188I | TCNGA | 7 cut(s) | 46, 109, 130, 385, 845, 928, 1189 |
| Hpy188III | TCNNGA | 7 cut(s) | 90, 200, 333, 557, 569, 1103, 1199 |
| Hpy8I | GTNNAC | 5 cut(s) | 304, 438, 790, 1290, 1434 |
| HpyAV | CCTTC | 3 cut(s) | 424, 1374, 1529 |
| HpyCH4III | ACNGT | 5 cut(s) | 646, 1372, 1390, 1396, 1438 |
| HpyCH4IV | ACGT | 3 cut(s) | 527, 786, 1036 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 967, 1037, 1064 |
| HpyF3I | CTNAG | 6 cut(s) | 267, 754, 880, 1071, 1101, 1530 |
| HpySE526I | ACGT | 3 cut(s) | 527, 786, 1036 |
| Hsp92II | CATG | 5 cut(s) | 613, 965, 1097, 1139, 1497 |
| Kpn2I | TCCGGA | 1 cut(s) | 1198 |
| Kzo9I | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| LguI | GCTCTTC | 1 cut(s) | 168 |
| LmnI | GCTCC | 5 cut(s) | 418, 532, 1036, 1072, 1463 |
| Lsp1109I | GCAGC | 1 cut(s) | 1484 |
| LweI | GCATC | 2 cut(s) | 767, 948 |
| MaeI | CTAG | 2 cut(s) | 191, 333 |
| MaeII | ACGT | 3 cut(s) | 527, 786, 1036 |
| MaeIII | GTNAC | 4 cut(s) | 640, 1372, 1390, 1438 |
| MalI | GATC | 9 cut(s) | 63, 88, 147, 555, 935, 1335, 1381, 1455, 1470 |
| MboI | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| MboII | GAAGA | 6 cut(s) | 63, 185, 557, 1151, 1412, 1516 |
| MfeI | CAATTG | 3 cut(s) | 96, 672, 1026 |
| MflI | RGATCY | 3 cut(s) | 61, 86, 1468 |
| MhlI | GDGCHC | 1 cut(s) | 440 |
| MlyI | GAGTC | 1 cut(s) | 1091 |
| MmeI | TCCRAC | 2 cut(s) | 510, 1205 |
| Mph1103I | ATGCAT | 1 cut(s) | 963 |
| MroI | TCCGGA | 1 cut(s) | 1198 |
| MroXI | GAANNNNTTC | 2 cut(s) | 592, 1518 |
| MseI | TTAA | 6 cut(s) | 81, 279, 318, 362, 746, 1464 |
| MspCI | CTTAAG | 2 cut(s) | 317, 745 |
| MspI | CCGG | 4 cut(s) | 21, 678, 1199, 1243 |
| MspR9I | CCNGG | 4 cut(s) | 347, 416, 679, 1243 |
| MunI | CAATTG | 3 cut(s) | 96, 672, 1026 |
| Mva1269I | GAATGC | 4 cut(s) | 168, 379, 517, 1040 |
| MvaI | CCWGG | 2 cut(s) | 347, 416 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 967, 1037, 1064 |
| NciI | CCSGG | 2 cut(s) | 679, 1243 |
| NcoI | CCATGG | 1 cut(s) | 609 |
| NdeI | CATATG | 1 cut(s) | 57 |
| NdeII | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| NlaIII | CATG | 5 cut(s) | 613, 965, 1097, 1139, 1497 |
| NlaIV | GGNNCC | 3 cut(s) | 19, 684, 1356 |
| NmuCI | GTSAC | 1 cut(s) | 1390 |
| NsiI | ATGCAT | 1 cut(s) | 963 |
| NspI | RCATGY | 1 cut(s) | 1497 |
| NspV | TTCGAA | 1 cut(s) | 518 |
| PaeI | GCATGC | 1 cut(s) | 1497 |
| PceI | AGGCCT | 1 cut(s) | 467 |
| PciSI | GCTCTTC | 1 cut(s) | 168 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 524 |
| PctI | GAATGC | 4 cut(s) | 168, 379, 517, 1040 |
| PdmI | GAANNNNTTC | 2 cut(s) | 592, 1518 |
| PfeI | GAWTC | 9 cut(s) | 41, 47, 125, 329, 614, 838, 1147, 1184, 1250 |
| PflFI | GACNNNGTC | 2 cut(s) | 185, 1416 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 58, 529 |
| PfoI | TCCNGGA | 1 cut(s) | 414 |
| PkrI | GCNGC | 2 cut(s) | 275, 1499 |
| PleI | GAGTC | 1 cut(s) | 1091 |
| PmaCI | CACGTG | 1 cut(s) | 1037 |
| PmlI | CACGTG | 1 cut(s) | 1037 |
| PpsI | GAGTC | 1 cut(s) | 1091 |
| Ppu21I | YACGTR | 1 cut(s) | 1037 |
| PpuMI | RGGWCCY | 1 cut(s) | 683 |
| PshBI | ATTAAT | 1 cut(s) | 279 |
| PsiI | TTATAA | 2 cut(s) | 717, 1086 |
| Psp1406I | AACGTT | 1 cut(s) | 527 |
| Psp5II | RGGWCCY | 1 cut(s) | 683 |
| Psp6I | CCWGG | 2 cut(s) | 345, 414 |
| PspCI | CACGTG | 1 cut(s) | 1037 |
| PspGI | CCWGG | 2 cut(s) | 345, 414 |
| PspN4I | GGNNCC | 3 cut(s) | 19, 684, 1356 |
| PspPI | GGNCC | 5 cut(s) | 92, 239, 683, 1008, 1240 |
| PspPPI | RGGWCCY | 1 cut(s) | 683 |
| PsuI | RGATCY | 3 cut(s) | 61, 86, 1468 |
| PsyI | GACNNNGTC | 2 cut(s) | 185, 1416 |
| RsaI | GTAC | 4 cut(s) | 576, 1346, 1398, 1433 |
| RsaNI | GTAC | 4 cut(s) | 575, 1345, 1397, 1432 |
| SapI | GCTCTTC | 1 cut(s) | 168 |
| SaqAI | TTAA | 6 cut(s) | 81, 279, 318, 362, 746, 1464 |
| SatI | GCNGC | 2 cut(s) | 274, 1498 |
| Sau3AI | GATC | 9 cut(s) | 61, 86, 145, 553, 933, 1333, 1379, 1453, 1468 |
| Sau96I | GGNCC | 5 cut(s) | 92, 239, 683, 1008, 1240 |
| SchI | GAGTC | 1 cut(s) | 1091 |
| ScrFI | CCNGG | 4 cut(s) | 347, 416, 679, 1243 |
| SduI | GDGCHC | 1 cut(s) | 440 |
| SfaNI | GCATC | 2 cut(s) | 767, 948 |
| SfcI | CTRYAG | 2 cut(s) | 149, 645 |
| SfuI | TTCGAA | 1 cut(s) | 518 |
| SinI | GGWCC | 4 cut(s) | 92, 239, 683, 1008 |
| SmlI | CTYRAG | 4 cut(s) | 198, 317, 569, 745 |
| SmoI | CTYRAG | 4 cut(s) | 198, 317, 569, 745 |
| SphI | GCATGC | 1 cut(s) | 1497 |
| SseBI | AGGCCT | 1 cut(s) | 467 |
| SsiI | CCGC | 1 cut(s) | 273 |
| SspMI | CTAG | 2 cut(s) | 191, 333 |
| StuI | AGGCCT | 1 cut(s) | 467 |
| StyD4I | CCNGG | 4 cut(s) | 345, 414, 677, 1241 |
| StyI | CCWWGG | 4 cut(s) | 609, 951, 1273, 1314 |
| TaaI | ACNGT | 5 cut(s) | 646, 1372, 1390, 1396, 1438 |
| TaiI | ACGT | 3 cut(s) | 530, 789, 1039 |
| TaqI | TCGA | 6 cut(s) | 518, 665, 695, 707, 1060, 1378 |
| TatI | WGTACW | 2 cut(s) | 1344, 1396 |
| TauI | GCSGC | 1 cut(s) | 276 |
| TfiI | GAWTC | 9 cut(s) | 41, 47, 125, 329, 614, 838, 1147, 1184, 1250 |
| Tru1I | TTAA | 6 cut(s) | 81, 279, 318, 362, 746, 1464 |
| Tru9I | TTAA | 6 cut(s) | 81, 279, 318, 362, 746, 1464 |
| TscAI | CASTG | 2 cut(s) | 881, 1441 |
| TseFI | GTSAC | 1 cut(s) | 1390 |
| TseI | GCWGC | 1 cut(s) | 1497 |
| Tsp45I | GTSAC | 1 cut(s) | 1390 |
| TspDTI | ATGAA | 5 cut(s) | 815, 875, 1152, 1242, 1527 |
| TspGWI | ACGGA | 1 cut(s) | 1450 |
| TspRI | CASTG | 2 cut(s) | 881, 1441 |
| Tth111I | GACNNNGTC | 2 cut(s) | 185, 1416 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 58, 529 |
| Vha464I | CTTAAG | 2 cut(s) | 317, 745 |
| VneI | GTGCAC | 1 cut(s) | 436 |
| VpaK11BI | GGWCC | 4 cut(s) | 92, 239, 683, 1008 |
| VspI | ATTAAT | 1 cut(s) | 279 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 401 |
| XapI | RAATTY | 2 cut(s) | 286, 603 |
| XbaI | TCTAGA | 1 cut(s) | 332 |
| XceI | RCATGY | 1 cut(s) | 1497 |
| XmnI | GAANNNNTTC | 2 cut(s) | 592, 1518 |
| XspI | CTAG | 2 cut(s) | 191, 333 |
| Zsp2I | ATGCAT | 1 cut(s) | 963 |