Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008447

Physical Location & Seq

Genomic Coordinates Forward (+)

14584044 .. 14586023

Gene Structure 1980 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17585

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1146 bp

ATGGAGGACGCCTGCAAATCGGCGCTGAACTTCTTCTCCGATCAGCAGCTCTGCTACGCCGACATCCTCACCCCGCCGGAGGTTATAGCTCGAATCCAAGTCGCCGTCCTCAACTTCCTCCGAATCCTGACCTCGCCGGACCCCGCAATCTCCGACCTCCCTCTCGTCGCTAGAAGCTCAAGCAATAGTCGAGTGAGCCGGGGCCTGGTGACTCGGACTTCATGGATTTTCCTGACGCGCTCGTTCTGCACCAGATCGCTTCTGAGGCCCAATGCCGCCAAAGCCTTTATCAGAGTGTGGAAGGTGATGGCGATGTGCTCTGAGATTTTGGGGCAAGGAAAGAGAGTCACGCAGCGGGAGCTCTTCTACAAGTTGCTTTGCGACTCGCCGGAGTATTTCTCGTCGCAATCGCAGGTCAATCGGACTATCCAAGATGTAGTGGCATTGCTTCGCTGCAGCCGTTACAGCCTCGGAATCATGGCCTCTAGCCGAGGACTTGTTGCCGGCCGTTTGCTGTTGCAGCCAAACCAAGAGGTTGTGGACTGTGCTGCCTGTGGATTTTCCGGGCATGCTATCACTGGTGACTTGAATTCGATAGATAAGTTGATGATGAAAACAGATGCGCGGTACATCATTGTAGTCGAAAAGCATGCAATATACCAGCGGCTGGTTGAGGACCATGTGTTCAACCAAATTCCCAGCATTCTTATCACTGCCAAAGGGTACCCAGATATTGCCACGAGGCTGCTGCTTCATCGATTGAGCCATGCATTTCCTGATTTGCCGATTTTAGCACTAGTCGACTGGAACCCAGCGGGTTTAGCTATTTTATGCACTTTCAAGTTCGGAAGTATAGGGATGGGACTGGAAGCTTACAGATATGCTTGCAATGTCAAGTGGTTGGGAATGCGAGCTGATGACATAGATCTCATACCCGCAGAAGCTTTGGTTCCATTGAAACCAAAGGACATCCAAATTGCTAAAAGCTTGATGTCATCGGACATGTTGCAGGAGAGCTACAGAGAAGAGCTGACACTGATGGTTGAGAGCGGCCAGAGAGCAGAAATTGAAGCACTTTATTGTCATGGATATGATTACTTGGGAAAGTTCATGGCAAAGAAAATTGTACGAGCCAATTACATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000706 GO:0000729 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0003916 GO:0003918 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007275 GO:0008094 GO:0008150 GO:0008152 GO:0009553 GO:0009555 GO:0009791 GO:0009987 GO:0010154 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0016889 GO:0016894 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0035825 GO:0042138 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061458 GO:0061505 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04113 map04113

Pfam Domains

Protein Families

TP6A_N

Protein Analysis

381

Amino Acids

42.7

Weight (kDa)

8.69

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TP6A_N	PF04406	95 - 159	3.2e-17	Type IIB DNA topoisomerase
TOP6A-Spo11_Toprim	PF21180	210 - 375	9.3e-41	Topoisomerase 6 subunit A/Spo11, Toprim domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63990 AT1G63990
fragaria_vesca	FvH4_5g03200 FvH4_5g03200 FvH4_5g03200 FvH4_5g03200 FvH4_5g03200
malus_domestica	MD14G1112000.v1.1
prunus_persica	Prupe.5G106600_v2.0.a1
pyrus_communis	pycom14g10670
rosa_chinensis	RchiOBHm_Chr7g0196581
rosa_multiflora	Rmu_co8280957.1_g000001 Rmu_sc0006080.1_g000002 Rmu_sc0040598.1_g000001 Rmu_sc0040599.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259190
rosa_rugosa	Rorug07G0034800 Rorug07G0034900
rosa_samantha	Rh7AG158900 Rh7BG160900 Rh7CG167300 Rh7DG160100
rosa_wichuraiana	Rw7G013890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	403
Acc65I	GGTACC	1 cut(s)	723
AccB1I	GGYRCC	1 cut(s)	723
AccB7I	CCANNNNNTGG	1 cut(s)	667
AccBSI	CCGCTC	1 cut(s)	1050
AccI	GTMKAC	1 cut(s)	801
AccII	CGCG	2 cut(s)	238, 625
AciI	CCGC	9 cut(s)	74, 144, 276, 355, 625, 664, 815, 936, 1050
AcoI	YGGCCR	2 cut(s)	505, 1051
AcsI	RAATTY	2 cut(s)	589, 693
AcyI	GRCGYC	1 cut(s)	9
AfaI	GTAC	3 cut(s)	629, 725, 1128
AfiI	CCNNNNNNNGG	3 cut(s)	79, 205, 667
AflIII	ACRYGT	1 cut(s)	1002
AgsI	TTSAA	5 cut(s)	589, 688, 841, 958, 1070
AhlI	ACTAGT	1 cut(s)	796
AjnI	CCWGG	1 cut(s)	204
AloI	GAACNNNNNNTCC	4 cut(s)	20, 52, 668, 700
Alw21I	GWGCWC	2 cut(s)	320, 363
AlwNI	CAGNNNCTG	1 cut(s)	667
AoxI	GGCC	5 cut(s)	202, 266, 480, 505, 1051
ApeKI	GCWGC	8 cut(s)	46, 352, 453, 456, 520, 548, 745, 748
ApoI	RAATTY	2 cut(s)	589, 693
Asp700I	GAANNNNTTC	1 cut(s)	32
Asp718I	GGTACC	1 cut(s)	723
AspLEI	GCGC	3 cut(s)	25, 240, 625
AspS9I	GGNCC	4 cut(s)	139, 202, 267, 676
AsuC2I	CCSGG	2 cut(s)	200, 565
AsuHPI	GGTGA	4 cut(s)	61, 220, 316, 593
AvaII	GGWCC	2 cut(s)	139, 676
BanI	GGYRCC	1 cut(s)	723
BanII	GRGCYC	1 cut(s)	363
BauI	CACGAG	1 cut(s)	739
Bbv12I	GWGCWC	2 cut(s)	320, 363
BbvI	GCAGC	8 cut(s)	58, 364, 440, 468, 532, 535, 732, 735
BccI	CCATC	3 cut(s)	301, 853, 1033
BceAI	ACGGC	3 cut(s)	89, 444, 492
BcgI	CGANNNNNNTGC	6 cut(s)	401, 435, 632, 666, 730, 764
BciT130I	CCWGG	1 cut(s)	206
BcnI	CCSGG	2 cut(s)	200, 565
BcuI	ACTAGT	1 cut(s)	796
BfaI	CTAG	4 cut(s)	171, 486, 797, 1144
BfmI	CTRYAG	2 cut(s)	454, 1018
BfoI	RGCGCY	1 cut(s)	26
BfuAI	ACCTGC	1 cut(s)	403
BglII	AGATCT	1 cut(s)	925
Bme1390I	CCNGG	3 cut(s)	200, 206, 565
Bme18I	GGWCC	2 cut(s)	139, 676
BmgT120I	GGNCC	4 cut(s)	139, 202, 267, 676
BmiI	GGNNCC	5 cut(s)	141, 203, 725, 809, 951
BmrFI	CCNGG	3 cut(s)	200, 206, 565
BmsI	GCATC	1 cut(s)	610
BplI	GAGNNNNNCTC	2 cut(s)	383, 415
BpuEI	CTTGAG	1 cut(s)	163
BpuMI	CCSGG	2 cut(s)	200, 565
Bsa29I	ATCGAT	1 cut(s)	757
BsaHI	GRCGYC	1 cut(s)	9
BsaJI	CCNNGG	3 cut(s)	199, 469, 490
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	3 cut(s)	79, 205, 667
Bse118I	RCCGGY	1 cut(s)	503
Bse1I	ACTGG	3 cut(s)	583, 809, 870
Bse3DI	GCAATG	2 cut(s)	443, 895
BseBI	CCWGG	1 cut(s)	206
BseCI	ATCGAT	1 cut(s)	757
BseDI	CCNNGG	3 cut(s)	199, 469, 490
BseGI	GGATG	3 cut(s)	63, 864, 969
BseLI	CCNNNNNNNGG	3 cut(s)	79, 205, 667
BseMI	GCAATG	2 cut(s)	443, 895
BseMII	CTCAG	2 cut(s)	254, 312
BseNI	ACTGG	3 cut(s)	583, 809, 870
BseX3I	CGGCCG	1 cut(s)	505
BseXI	GCAGC	8 cut(s)	58, 364, 440, 468, 532, 535, 732, 735
BseYI	CCCAGC	2 cut(s)	698, 811
BsgI	GTGCAG	1 cut(s)	232
Bsh1236I	CGCG	2 cut(s)	238, 625
Bsh1285I	CGRYCG	1 cut(s)	508
BshFI	GGCC	5 cut(s)	204, 268, 482, 507, 1053
BshNI	GGYRCC	1 cut(s)	723
BshVI	ATCGAT	1 cut(s)	757
BsiEI	CGRYCG	1 cut(s)	508
BsiHKAI	GWGCWC	2 cut(s)	320, 363
BsiSI	CCGG	6 cut(s)	77, 137, 199, 389, 504, 564
BslFI	GGGAC	1 cut(s)	876
BslI	CCNNNNNNNGG	3 cut(s)	79, 205, 667
BsmFI	GGGAC	1 cut(s)	876
BsmI	GAATGC	2 cut(s)	702, 912
BsnI	GGCC	5 cut(s)	204, 268, 482, 507, 1053
Bsp1286I	GDGCHC	2 cut(s)	320, 363
Bsp143I	GATC	3 cut(s)	40, 254, 925
BspACI	CCGC	9 cut(s)	74, 144, 276, 355, 625, 664, 815, 936, 1050
BspANI	GGCC	5 cut(s)	204, 268, 482, 507, 1053
BspCNI	CTCAG	2 cut(s)	255, 313
BspDI	ATCGAT	1 cut(s)	757
BspFNI	CGCG	2 cut(s)	238, 625
BspLI	GGNNCC	5 cut(s)	141, 203, 725, 809, 951
BspMAI	CTGCAG	1 cut(s)	458
BspMI	ACCTGC	1 cut(s)	403
BspQI	GCTCTTC	2 cut(s)	368, 1020
BspT107I	GGYRCC	1 cut(s)	723
BsrBI	CCGCTC	1 cut(s)	1050
BsrDI	GCAATG	2 cut(s)	443, 895
BsrFI	RCCGGY	1 cut(s)	503
BsrI	ACTGG	3 cut(s)	583, 809, 870
BssAI	RCCGGY	1 cut(s)	503
BssECI	CCNNGG	3 cut(s)	199, 469, 490
BssMI	GATC	3 cut(s)	40, 254, 925
BssNI	GRCGYC	1 cut(s)	9
BssSI	CACGAG	1 cut(s)	739
Bst2BI	CACGAG	1 cut(s)	739
Bst2UI	CCWGG	1 cut(s)	206
Bst4CI	ACNGT	1 cut(s)	545
Bst6I	CTCTTC	2 cut(s)	368, 1020
BstACI	GRCGYC	1 cut(s)	9
BstC8I	GCNNGC	6 cut(s)	13, 505, 570, 651, 886, 912
BstDEI	CTNAG	2 cut(s)	263, 321
BstF5I	GGATG	3 cut(s)	63, 864, 969
BstFNI	CGCG	2 cut(s)	238, 625
BstH2I	RGCGCY	1 cut(s)	26
BstHHI	GCGC	3 cut(s)	25, 240, 625
BstKTI	GATC	3 cut(s)	43, 257, 928
BstMBI	GATC	3 cut(s)	40, 254, 925
BstMCI	CGRYCG	1 cut(s)	508
BstMWI	GCNNNNNNNGC	7 cut(s)	246, 265, 281, 358, 465, 520, 821
BstNI	CCWGG	1 cut(s)	206
BstNSI	RCATGY	3 cut(s)	572, 653, 1006
BstSCI	CCNGG	3 cut(s)	198, 204, 563
BstSFI	CTRYAG	2 cut(s)	454, 1018
BstUI	CGCG	2 cut(s)	238, 625
BstV1I	GCAGC	8 cut(s)	58, 364, 440, 468, 532, 535, 732, 735
BstX2I	RGATCY	1 cut(s)	925
BstYI	RGATCY	1 cut(s)	925
BstZI	CGGCCG	1 cut(s)	505
Bsu15I	ATCGAT	1 cut(s)	757
BsuRI	GGCC	5 cut(s)	204, 268, 482, 507, 1053
BsuTUI	ATCGAT	1 cut(s)	757
BtgZI	GCGATG	1 cut(s)	326
BtsCI	GGATG	3 cut(s)	63, 864, 969
BtsI	GCAGTG	1 cut(s)	711
BtsIMutI	CAGTG	3 cut(s)	576, 711, 1034
BveI	ACCTGC	1 cut(s)	403
Cac8I	GCNNGC	6 cut(s)	13, 505, 570, 651, 886, 912
CaiI	CAGNNNCTG	1 cut(s)	667
CfoI	GCGC	3 cut(s)	25, 240, 625
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	4 cut(s)	139, 202, 267, 676
ClaI	ATCGAT	1 cut(s)	757
CseI	GACGC	2 cut(s)	17, 244
Csp6I	GTAC	3 cut(s)	628, 724, 1127
CviAII	CATG	9 cut(s)	222, 478, 569, 650, 680, 767, 1003, 1085, 1111
CviQI	GTAC	3 cut(s)	628, 724, 1127
DdeI	CTNAG	2 cut(s)	263, 321
DpnI	GATC	3 cut(s)	42, 256, 927
DpnII	GATC	3 cut(s)	40, 254, 925
EaeI	YGGCCR	2 cut(s)	505, 1051
EagI	CGGCCG	1 cut(s)	505
Eam1104I	CTCTTC	2 cut(s)	368, 1020
EarI	CTCTTC	2 cut(s)	368, 1020
Ecl136II	GAGCTC	1 cut(s)	361
EclXI	CGGCCG	1 cut(s)	505
Eco24I	GRGCYC	1 cut(s)	363
Eco47I	GGWCC	2 cut(s)	139, 676
Eco52I	CGGCCG	1 cut(s)	505
Eco53kI	GAGCTC	1 cut(s)	361
EcoICRI	GAGCTC	1 cut(s)	361
EcoO109I	RGGNCCY	1 cut(s)	202
EcoRI	GAATTC	1 cut(s)	589
EcoRII	CCWGG	1 cut(s)	204
EcoT22I	ATGCAT	1 cut(s)	772
EcoT38I	GRGCYC	1 cut(s)	363
FaeI	CATG	9 cut(s)	225, 481, 572, 653, 683, 770, 1006, 1088, 1114
FaqI	GGGAC	1 cut(s)	876
FatI	CATG	9 cut(s)	221, 477, 568, 649, 679, 766, 1002, 1084, 1110
FauI	CCCGC	5 cut(s)	81, 151, 348, 808, 943
FblI	GTMKAC	1 cut(s)	801
FokI	GGATG	3 cut(s)	50, 871, 956
FriOI	GRGCYC	1 cut(s)	363
FspBI	CTAG	4 cut(s)	171, 486, 797, 1144
GlaI	GCGC	3 cut(s)	24, 239, 624
GsaI	CCCAGC	2 cut(s)	702, 815
HaeII	RGCGCY	1 cut(s)	26
HaeIII	GGCC	5 cut(s)	204, 268, 482, 507, 1053
HapII	CCGG	6 cut(s)	77, 137, 199, 389, 504, 564
HgaI	GACGC	2 cut(s)	17, 244
HhaI	GCGC	3 cut(s)	25, 240, 625
Hin1I	GRCGYC	1 cut(s)	9
Hin1II	CATG	9 cut(s)	225, 481, 572, 653, 683, 770, 1006, 1088, 1114
Hin6I	GCGC	3 cut(s)	23, 238, 623
HinP1I	GCGC	3 cut(s)	23, 238, 623
HincII	GTYRAC	1 cut(s)	802
HindII	GTYRAC	1 cut(s)	802
HindIII	AAGCTT	3 cut(s)	870, 942, 985
HinfI	GANTC	6 cut(s)	93, 123, 211, 345, 383, 474
HpaII	CCGG	6 cut(s)	77, 137, 199, 389, 504, 564
HphI	GGTGA	4 cut(s)	61, 220, 316, 593
Hpy166II	GTNNAC	2 cut(s)	541, 802
Hpy188III	TCNNGA	3 cut(s)	127, 232, 776
Hpy8I	GTNNAC	2 cut(s)	541, 802
Hpy99I	CGWCG	2 cut(s)	170, 406
HpyAV	CCTTC	1 cut(s)	295
HpyCH4III	ACNGT	1 cut(s)	545
HpyCH4V	TGCA	9 cut(s)	15, 249, 456, 520, 653, 770, 834, 888, 1009
HpyF10VI	GCNNNNNNNGC	7 cut(s)	246, 265, 281, 358, 465, 520, 821
HpyF3I	CTNAG	2 cut(s)	263, 321
Hsp92I	GRCGYC	1 cut(s)	9
Hsp92II	CATG	9 cut(s)	225, 481, 572, 653, 683, 770, 1006, 1088, 1114
HspAI	GCGC	3 cut(s)	23, 238, 623
KpnI	GGTACC	1 cut(s)	727
KroI	GCCGGC	1 cut(s)	503
KroNI	GCCGGC	1 cut(s)	505
Kzo9I	GATC	3 cut(s)	40, 254, 925
LguI	GCTCTTC	2 cut(s)	368, 1020
LmnI	GCTCC	1 cut(s)	358
Lsp1109I	GCAGC	8 cut(s)	58, 364, 440, 468, 532, 535, 732, 735
LweI	GCATC	1 cut(s)	610
MaeI	CTAG	4 cut(s)	171, 486, 797, 1144
MaeIII	GTNAC	4 cut(s)	208, 346, 461, 581
MalI	GATC	3 cut(s)	42, 256, 927
MbiI	CCGCTC	1 cut(s)	1050
MboI	GATC	3 cut(s)	40, 254, 925
MboII	GAAGA	3 cut(s)	25, 355, 1037
MflI	RGATCY	1 cut(s)	925
MhlI	GDGCHC	2 cut(s)	320, 363
MluCI	AATT	6 cut(s)	589, 693, 975, 1065, 1122, 1135
MlyI	GAGTC	3 cut(s)	205, 354, 377
MmeI	TCCRAC	1 cut(s)	177
Mph1103I	ATGCAT	1 cut(s)	772
MroNI	GCCGGC	1 cut(s)	503
MroXI	GAANNNNTTC	1 cut(s)	32
MslI	CAYNNNNRTG	1 cut(s)	1089
MspA1I	CMGCKG	3 cut(s)	355, 664, 815
MspI	CCGG	6 cut(s)	77, 137, 199, 389, 504, 564
MspR9I	CCNGG	3 cut(s)	200, 206, 565
Mva1269I	GAATGC	2 cut(s)	702, 912
MvaI	CCWGG	1 cut(s)	206
MvnI	CGCG	2 cut(s)	238, 625
MwoI	GCNNNNNNNGC	7 cut(s)	246, 265, 281, 358, 465, 520, 821
NaeI	GCCGGC	1 cut(s)	505
NciI	CCSGG	2 cut(s)	200, 565
NdeII	GATC	3 cut(s)	40, 254, 925
NgoMIV	GCCGGC	1 cut(s)	503
NlaIII	CATG	9 cut(s)	225, 481, 572, 653, 683, 770, 1006, 1088, 1114
NlaIV	GGNNCC	5 cut(s)	141, 203, 725, 809, 951
NmeAIII	GCCGAG	1 cut(s)	515
NmuCI	GTSAC	3 cut(s)	208, 346, 581
NsiI	ATGCAT	1 cut(s)	772
NspI	RCATGY	3 cut(s)	572, 653, 1006
PaeI	GCATGC	2 cut(s)	572, 653
PciI	ACATGT	1 cut(s)	1002
PciSI	GCTCTTC	2 cut(s)	368, 1020
PcsI	WCGNNNNNNNCGW	1 cut(s)	457
PctI	GAATGC	2 cut(s)	702, 912
PdiI	GCCGGC	1 cut(s)	505
PdmI	GAANNNNTTC	1 cut(s)	32
PfeI	GAWTC	3 cut(s)	93, 123, 474
PflMI	CCANNNNNTGG	1 cut(s)	667
PleI	GAGTC	3 cut(s)	205, 353, 377
PpsI	GAGTC	3 cut(s)	205, 353, 377
PscI	ACATGT	1 cut(s)	1002
Psp124BI	GAGCTC	1 cut(s)	363
Psp6I	CCWGG	1 cut(s)	204
PspFI	CCCAGC	2 cut(s)	698, 811
PspGI	CCWGG	1 cut(s)	204
PspN4I	GGNNCC	5 cut(s)	141, 203, 725, 809, 951
PspPI	GGNCC	4 cut(s)	139, 202, 267, 676
PstI	CTGCAG	1 cut(s)	458
PstNI	CAGNNNCTG	1 cut(s)	667
PsuI	RGATCY	1 cut(s)	925
RsaI	GTAC	3 cut(s)	629, 725, 1128
RsaNI	GTAC	3 cut(s)	628, 724, 1127
RseI	CAYNNNNRTG	1 cut(s)	1089
SacI	GAGCTC	1 cut(s)	363
SalI	GTCGAC	1 cut(s)	800
SapI	GCTCTTC	2 cut(s)	368, 1020
Sau3AI	GATC	3 cut(s)	40, 254, 925
Sau96I	GGNCC	4 cut(s)	139, 202, 267, 676
SchI	GAGTC	3 cut(s)	205, 354, 377
ScrFI	CCNGG	3 cut(s)	200, 206, 565
SduI	GDGCHC	2 cut(s)	320, 363
SfaNI	GCATC	1 cut(s)	610
SfcI	CTRYAG	2 cut(s)	454, 1018
SinI	GGWCC	2 cut(s)	139, 676
SmiMI	CAYNNNNRTG	1 cut(s)	1089
SmlI	CTYRAG	1 cut(s)	178
SmoI	CTYRAG	1 cut(s)	178
SpeI	ACTAGT	1 cut(s)	796
SphI	GCATGC	2 cut(s)	572, 653
Sse9I	AATT	6 cut(s)	589, 693, 975, 1065, 1122, 1135
SsiI	CCGC	9 cut(s)	74, 144, 276, 355, 625, 664, 815, 936, 1050
SspMI	CTAG	4 cut(s)	171, 486, 797, 1144
SstI	GAGCTC	1 cut(s)	363
StyD4I	CCNGG	3 cut(s)	198, 204, 563
TaaI	ACNGT	1 cut(s)	545
TaqI	TCGA	6 cut(s)	91, 190, 593, 642, 757, 801
TasI	AATT	6 cut(s)	589, 693, 975, 1065, 1122, 1135
TauI	GCSGC	3 cut(s)	278, 667, 1053
TfiI	GAWTC	3 cut(s)	93, 123, 474
TscAI	CASTG	3 cut(s)	583, 718, 1041
TseFI	GTSAC	3 cut(s)	208, 346, 581
TseI	GCWGC	8 cut(s)	46, 352, 453, 456, 520, 548, 745, 748
Tsp45I	GTSAC	3 cut(s)	208, 346, 581
TspDTI	ATGAA	4 cut(s)	210, 626, 743, 1099
TspRI	CASTG	3 cut(s)	583, 718, 1041
Van91I	CCANNNNNTGG	1 cut(s)	667
VpaK11BI	GGWCC	2 cut(s)	139, 676
XapI	RAATTY	2 cut(s)	589, 693
XceI	RCATGY	3 cut(s)	572, 653, 1006
XmiI	GTMKAC	1 cut(s)	801
XmnI	GAANNNNTTC	1 cut(s)	32
XspI	CTAG	4 cut(s)	171, 486, 797, 1144
Zsp2I	ATGCAT	1 cut(s)	772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.