Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0008447

Physical Location & Seq

Genomic Coordinates Reverse (-)

53590609 .. 53592672

Gene Structure 2064 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00259190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGGAGGACGCCTGCAAATCGGCGCTGAACTTCTTCTCCGATCAGCAGCTCTGCTACGCCGACATCCTCACCCCGCCGGAGGTTATAGCTCGAATCCAAGTCGCCGTCCTCAACTTCCTCCGAATCCTGACCTTGCCGGACCCCGCAATCTCCGACCTCCCTCTCGTCGCTAGAAGCTCAAGCAATAGTCGACTGAGCCGGGGCCTGGTGACTCAGACTTCATGGATTTTCCTGACGCGCTCGTTCTGCACCAGATCGCTTATGCGGCCCAATGCCGCCAAAGCCTTTATCAGAGTGTGGAAGGTGATGGCGATGTGCTCTGAGATTTTGGGGCAAGGAAAGAGAGTCACGCAGCGGGAGCTCTTCTACAAGTTGCTTTGCGACTCGCCGGAGTATTTCTCGTCGCAATCGCAGGTCAATCGGACTATCCAAGATGTAGTGGCATTGCTTCGCTGCAGCCGTTACAGCCTCGGAATCATGGCCTCTAGCCGAGGACTTGTTGCCGGCCGTTTGCTGTTGCAGGAGCCAAACCAAGAGGTTGTGGACTGTGCTGCCTGTGGATTTTCGGGGCATGCTATCACTGGTGACTTGAATTCGATAGATAAGTTGATGATGAAAACAGATGCGCGGTACATCATTGTAGTCGAAAAGCATGCAATATACCAGCGGCTGGTTGAGGACCATGTGTTCAACCAAATTCCCAGCATTCTTATCACCGCCAAAGGTTACCCTGATATTGCCACAAGGCTGCTTCTTCATCGATTGAGCCGTGCATTTCCTGGTTTGCCAATTTTAGCACTAGTTGACTGGAATCCAGCTGGTTTAGCTATTTTATGCACTTTCAAGTTTGGAAGTATAGGGATGGGACTGGAAGCTTATAGATATGCTTGCAATGTCCAGTGGTTGGGAATGCGAGCTGATGACATAGAGCTCATACCTGCAGAAGCTTTGGTTCCATTGAAACCAAAGGACATCCAAATTGCTAAAAGCTTGATGTCATCGGACATGTTGCAGGAGAGCTACAGAGAAGAGCTGACACTGATGGTTGAGAGTGGCCAGAGAGCAGAAATTGAAGCACTTTATTGTCATGGATATGATTACTTGGGAAAGTTCATAGCAAAGAAAATTGTACAAGGCAATTACATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000706 GO:0000729 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0003916 GO:0003918 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007275 GO:0008094 GO:0008150 GO:0008152 GO:0009553 GO:0009555 GO:0009791 GO:0009987 GO:0010154 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0016889 GO:0016894 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0035825 GO:0042138 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061458 GO:0061505 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04113 map04113

Pfam Domains

Protein Families

TP6A_N

Protein Analysis

382

Amino Acids

42.78

Weight (kDa)

8.42

Isoelectric Point (pI)

46.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TP6A_N	PF04406	95 - 159	3.3e-17	Type IIB DNA topoisomerase
TOP6A-Spo11_Toprim	PF21180	211 - 376	1.2e-40	Topoisomerase 6 subunit A/Spo11, Toprim domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63990 AT1G63990
fragaria_vesca	FvH4_5g03200 FvH4_5g03200 FvH4_5g03200 FvH4_5g03200 FvH4_5g03200
malus_domestica	MD14G1112000.v1.1
prunus_persica	Prupe.5G106600_v2.0.a1
pyrus_communis	pycom14g10670
rosa_chinensis	RchiOBHm_Chr7g0196581
rosa_multiflora	Rmu_co8280957.1_g000001 Rmu_sc0006080.1_g000002 Rmu_sc0040598.1_g000001 Rmu_sc0040599.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259190
rosa_rugosa	Rorug07G0034800 Rorug07G0034900
rosa_samantha	Rh7AG158900 Rh7BG160900 Rh7CG167300 Rh7DG160100
rosa_wichuraiana	Rw7G013890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	403, 946
AccB7I	CCANNNNNTGG	2 cut(s)	670, 904
AccI	GTMKAC	1 cut(s)	190
AccII	CGCG	2 cut(s)	238, 628
AciI	CCGC	8 cut(s)	74, 144, 265, 276, 355, 628, 667, 717
AcoI	YGGCCR	2 cut(s)	505, 1054
AcsI	RAATTY	2 cut(s)	592, 696
AcyI	GRCGYC	1 cut(s)	9
AfaI	GTAC	2 cut(s)	632, 1131
AfiI	CCNNNNNNNGG	4 cut(s)	79, 205, 670, 904
AflIII	ACRYGT	1 cut(s)	1005
AgsI	TTSAA	5 cut(s)	592, 691, 844, 961, 1073
AhlI	ACTAGT	1 cut(s)	799
AjnI	CCWGG	2 cut(s)	204, 778
AloI	GAACNNNNNNTCC	4 cut(s)	20, 52, 671, 703
Alw21I	GWGCWC	3 cut(s)	320, 363, 933
AlwNI	CAGNNNCTG	1 cut(s)	670
AoxI	GGCC	5 cut(s)	202, 266, 480, 505, 1054
ApeKI	GCWGC	6 cut(s)	46, 352, 453, 456, 551, 748
ApoI	RAATTY	2 cut(s)	592, 696
Asp700I	GAANNNNTTC	1 cut(s)	32
AspLEI	GCGC	3 cut(s)	25, 240, 628
AspS9I	GGNCC	4 cut(s)	139, 202, 267, 679
AsuC2I	CCSGG	1 cut(s)	200
AsuHPI	GGTGA	5 cut(s)	61, 220, 316, 596, 706
AvaII	GGWCC	2 cut(s)	139, 679
BalI	TGGCCA	1 cut(s)	1056
BanII	GRGCYC	2 cut(s)	363, 933
Bbv12I	GWGCWC	3 cut(s)	320, 363, 933
BbvI	GCAGC	6 cut(s)	58, 364, 440, 468, 538, 735
BccI	CCATC	3 cut(s)	301, 856, 1036
BceAI	ACGGC	4 cut(s)	89, 444, 492, 753
BcgI	CGANNNNNNTGC	4 cut(s)	401, 435, 635, 669
BciT130I	CCWGG	2 cut(s)	206, 780
BcnI	CCSGG	1 cut(s)	200
BcuI	ACTAGT	1 cut(s)	799
BfaI	CTAG	4 cut(s)	171, 486, 800, 1147
BfmI	CTRYAG	3 cut(s)	454, 939, 1021
BfoI	RGCGCY	1 cut(s)	26
BfuAI	ACCTGC	2 cut(s)	403, 946
BisI	GCNGC	9 cut(s)	47, 266, 276, 353, 454, 457, 552, 668, 749
BlsI	GCNGC	9 cut(s)	48, 267, 277, 354, 455, 458, 553, 669, 750
Bme1390I	CCNGG	3 cut(s)	200, 206, 780
Bme18I	GGWCC	2 cut(s)	139, 679
BmgT120I	GGNCC	4 cut(s)	139, 202, 267, 679
BmiI	GGNNCC	4 cut(s)	141, 203, 525, 954
BmrFI	CCNGG	3 cut(s)	200, 206, 780
BmsI	GCATC	1 cut(s)	613
BplI	GAGNNNNNCTC	2 cut(s)	383, 415
BpuEI	CTTGAG	1 cut(s)	163
BpuMI	CCSGG	1 cut(s)	200
Bsa29I	ATCGAT	1 cut(s)	760
BsaHI	GRCGYC	1 cut(s)	9
BsaJI	CCNNGG	3 cut(s)	199, 469, 490
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	4 cut(s)	79, 205, 670, 904
Bse118I	RCCGGY	1 cut(s)	503
Bse1I	ACTGG	4 cut(s)	586, 812, 873, 898
Bse3DI	GCAATG	2 cut(s)	443, 898
BseBI	CCWGG	2 cut(s)	206, 780
BseCI	ATCGAT	1 cut(s)	760
BseDI	CCNNGG	3 cut(s)	199, 469, 490
BseGI	GGATG	3 cut(s)	63, 867, 972
BseLI	CCNNNNNNNGG	4 cut(s)	79, 205, 670, 904
BseMI	GCAATG	2 cut(s)	443, 898
BseMII	CTCAG	3 cut(s)	185, 227, 312
BseNI	ACTGG	4 cut(s)	586, 812, 873, 898
BseX3I	CGGCCG	1 cut(s)	505
BseXI	GCAGC	6 cut(s)	58, 364, 440, 468, 538, 735
BseYI	CCCAGC	1 cut(s)	701
BsgI	GTGCAG	1 cut(s)	232
Bsh1236I	CGCG	2 cut(s)	238, 628
Bsh1285I	CGRYCG	1 cut(s)	508
BshFI	GGCC	5 cut(s)	204, 268, 482, 507, 1056
BshVI	ATCGAT	1 cut(s)	760
BsiEI	CGRYCG	1 cut(s)	508
BsiHKAI	GWGCWC	3 cut(s)	320, 363, 933
BsiSI	CCGG	5 cut(s)	77, 137, 199, 389, 504
BslFI	GGGAC	1 cut(s)	879
BslI	CCNNNNNNNGG	4 cut(s)	79, 205, 670, 904
BsmFI	GGGAC	1 cut(s)	879
BsmI	GAATGC	2 cut(s)	705, 915
BsnI	GGCC	5 cut(s)	204, 268, 482, 507, 1056
Bsp1286I	GDGCHC	3 cut(s)	320, 363, 933
Bsp1407I	TGTACA	1 cut(s)	1129
Bsp143I	GATC	2 cut(s)	40, 254
BspACI	CCGC	8 cut(s)	74, 144, 265, 276, 355, 628, 667, 717
BspANI	GGCC	5 cut(s)	204, 268, 482, 507, 1056
BspCNI	CTCAG	3 cut(s)	186, 226, 313
BspDI	ATCGAT	1 cut(s)	760
BspFNI	CGCG	2 cut(s)	238, 628
BspLI	GGNNCC	4 cut(s)	141, 203, 525, 954
BspMAI	CTGCAG	2 cut(s)	458, 943
BspMI	ACCTGC	2 cut(s)	403, 946
BspQI	GCTCTTC	2 cut(s)	368, 1023
BsrDI	GCAATG	2 cut(s)	443, 898
BsrFI	RCCGGY	1 cut(s)	503
BsrGI	TGTACA	1 cut(s)	1129
BsrI	ACTGG	4 cut(s)	586, 812, 873, 898
BssAI	RCCGGY	1 cut(s)	503
BssECI	CCNNGG	3 cut(s)	199, 469, 490
BssMI	GATC	2 cut(s)	40, 254
BssNI	GRCGYC	1 cut(s)	9
Bst2UI	CCWGG	2 cut(s)	206, 780
Bst4CI	ACNGT	1 cut(s)	548
Bst6I	CTCTTC	2 cut(s)	368, 1023
BstACI	GRCGYC	1 cut(s)	9
BstAUI	TGTACA	1 cut(s)	1129
BstC8I	GCNNGC	6 cut(s)	13, 505, 573, 654, 889, 915
BstDEI	CTNAG	3 cut(s)	194, 213, 321
BstEII	GGTNACC	1 cut(s)	725
BstF5I	GGATG	3 cut(s)	63, 867, 972
BstFNI	CGCG	2 cut(s)	238, 628
BstH2I	RGCGCY	1 cut(s)	26
BstHHI	GCGC	3 cut(s)	25, 240, 628
BstKTI	GATC	2 cut(s)	43, 257
BstMBI	GATC	2 cut(s)	40, 254
BstMCI	CGRYCG	1 cut(s)	508
BstMWI	GCNNNNNNNGC	6 cut(s)	246, 265, 281, 358, 465, 824
BstNI	CCWGG	2 cut(s)	206, 780
BstNSI	RCATGY	3 cut(s)	575, 656, 1009
BstPI	GGTNACC	1 cut(s)	725
BstSCI	CCNGG	3 cut(s)	198, 204, 778
BstSFI	CTRYAG	3 cut(s)	454, 939, 1021
BstUI	CGCG	2 cut(s)	238, 628
BstV1I	GCAGC	6 cut(s)	58, 364, 440, 468, 538, 735
BstZI	CGGCCG	1 cut(s)	505
Bsu15I	ATCGAT	1 cut(s)	760
BsuRI	GGCC	5 cut(s)	204, 268, 482, 507, 1056
BsuTUI	ATCGAT	1 cut(s)	760
BtgZI	GCGATG	1 cut(s)	326
BtsCI	GGATG	3 cut(s)	63, 867, 972
BtsIMutI	CAGTG	3 cut(s)	579, 905, 1037
BveI	ACCTGC	2 cut(s)	403, 946
Cac8I	GCNNGC	6 cut(s)	13, 505, 573, 654, 889, 915
CaiI	CAGNNNCTG	1 cut(s)	670
CfoI	GCGC	3 cut(s)	25, 240, 628
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	4 cut(s)	139, 202, 267, 679
ClaI	ATCGAT	1 cut(s)	760
CseI	GACGC	2 cut(s)	17, 244
Csp6I	GTAC	2 cut(s)	631, 1130
CviAII	CATG	7 cut(s)	222, 478, 572, 653, 683, 1006, 1088
CviQI	GTAC	2 cut(s)	631, 1130
DdeI	CTNAG	3 cut(s)	194, 213, 321
DpnI	GATC	2 cut(s)	42, 256
DpnII	GATC	2 cut(s)	40, 254
EaeI	YGGCCR	2 cut(s)	505, 1054
EagI	CGGCCG	1 cut(s)	505
Eam1104I	CTCTTC	2 cut(s)	368, 1023
EarI	CTCTTC	2 cut(s)	368, 1023
Ecl136II	GAGCTC	2 cut(s)	361, 931
EclXI	CGGCCG	1 cut(s)	505
Eco24I	GRGCYC	2 cut(s)	363, 933
Eco47I	GGWCC	2 cut(s)	139, 679
Eco52I	CGGCCG	1 cut(s)	505
Eco53kI	GAGCTC	2 cut(s)	361, 931
Eco91I	GGTNACC	1 cut(s)	725
EcoICRI	GAGCTC	2 cut(s)	361, 931
EcoO109I	RGGNCCY	1 cut(s)	202
EcoO65I	GGTNACC	1 cut(s)	725
EcoRI	GAATTC	1 cut(s)	592
EcoRII	CCWGG	2 cut(s)	204, 778
EcoT38I	GRGCYC	2 cut(s)	363, 933
FaeI	CATG	7 cut(s)	225, 481, 575, 656, 686, 1009, 1091
FaqI	GGGAC	1 cut(s)	879
FatI	CATG	7 cut(s)	221, 477, 571, 652, 682, 1005, 1087
FauI	CCCGC	3 cut(s)	81, 151, 348
FblI	GTMKAC	1 cut(s)	190
Fnu4HI	GCNGC	9 cut(s)	47, 266, 276, 353, 454, 457, 552, 668, 749
FokI	GGATG	3 cut(s)	50, 874, 959
FriOI	GRGCYC	2 cut(s)	363, 933
Fsp4HI	GCNGC	9 cut(s)	47, 266, 276, 353, 454, 457, 552, 668, 749
FspBI	CTAG	4 cut(s)	171, 486, 800, 1147
GlaI	GCGC	3 cut(s)	24, 239, 627
GluI	GCNGC	9 cut(s)	47, 266, 276, 353, 454, 457, 552, 668, 749
GsaI	CCCAGC	1 cut(s)	705
HaeII	RGCGCY	1 cut(s)	26
HaeIII	GGCC	5 cut(s)	204, 268, 482, 507, 1056
HapII	CCGG	5 cut(s)	77, 137, 199, 389, 504
HgaI	GACGC	2 cut(s)	17, 244
HhaI	GCGC	3 cut(s)	25, 240, 628
Hin1I	GRCGYC	1 cut(s)	9
Hin1II	CATG	7 cut(s)	225, 481, 575, 656, 686, 1009, 1091
Hin6I	GCGC	3 cut(s)	23, 238, 626
HinP1I	GCGC	3 cut(s)	23, 238, 626
HincII	GTYRAC	2 cut(s)	191, 805
HindII	GTYRAC	2 cut(s)	191, 805
HindIII	AAGCTT	3 cut(s)	873, 945, 988
HinfI	GANTC	7 cut(s)	93, 123, 211, 345, 383, 474, 811
HpaII	CCGG	5 cut(s)	77, 137, 199, 389, 504
HphI	GGTGA	5 cut(s)	61, 220, 316, 596, 706
Hpy166II	GTNNAC	3 cut(s)	191, 544, 805
Hpy188I	TCNGA	9 cut(s)	40, 122, 154, 216, 293, 322, 423, 473, 1003
Hpy188III	TCNNGA	2 cut(s)	127, 232
Hpy8I	GTNNAC	3 cut(s)	191, 544, 805
Hpy99I	CGWCG	2 cut(s)	170, 406
HpyAV	CCTTC	1 cut(s)	295
HpyCH4III	ACNGT	1 cut(s)	548
HpyF10VI	GCNNNNNNNGC	6 cut(s)	246, 265, 281, 358, 465, 824
HpyF3I	CTNAG	3 cut(s)	194, 213, 321
Hsp92I	GRCGYC	1 cut(s)	9
Hsp92II	CATG	7 cut(s)	225, 481, 575, 656, 686, 1009, 1091
HspAI	GCGC	3 cut(s)	23, 238, 626
KroI	GCCGGC	1 cut(s)	503
KroNI	GCCGGC	1 cut(s)	505
Kzo9I	GATC	2 cut(s)	40, 254
LguI	GCTCTTC	2 cut(s)	368, 1023
LmnI	GCTCC	2 cut(s)	358, 523
Lsp1109I	GCAGC	6 cut(s)	58, 364, 440, 468, 538, 735
LweI	GCATC	1 cut(s)	613
MaeI	CTAG	4 cut(s)	171, 486, 800, 1147
MaeIII	GTNAC	5 cut(s)	208, 346, 461, 584, 725
MalI	GATC	2 cut(s)	42, 256
MboI	GATC	2 cut(s)	40, 254
MboII	GAAGA	4 cut(s)	25, 355, 746, 1040
MhlI	GDGCHC	3 cut(s)	320, 363, 933
MlsI	TGGCCA	1 cut(s)	1056
MluCI	AATT	7 cut(s)	592, 696, 789, 978, 1068, 1125, 1138
MluNI	TGGCCA	1 cut(s)	1056
MlyI	GAGTC	3 cut(s)	205, 354, 377
MmeI	TCCRAC	1 cut(s)	177
Mox20I	TGGCCA	1 cut(s)	1056
MroNI	GCCGGC	1 cut(s)	503
MroXI	GAANNNNTTC	1 cut(s)	32
MscI	TGGCCA	1 cut(s)	1056
MslI	CAYNNNNRTG	1 cut(s)	1092
Msp20I	TGGCCA	1 cut(s)	1056
MspA1I	CMGCKG	3 cut(s)	355, 667, 818
MspI	CCGG	5 cut(s)	77, 137, 199, 389, 504
MspR9I	CCNGG	3 cut(s)	200, 206, 780
Mva1269I	GAATGC	2 cut(s)	705, 915
MvaI	CCWGG	2 cut(s)	206, 780
MvnI	CGCG	2 cut(s)	238, 628
MwoI	GCNNNNNNNGC	6 cut(s)	246, 265, 281, 358, 465, 824
NaeI	GCCGGC	1 cut(s)	505
NciI	CCSGG	1 cut(s)	200
NdeII	GATC	2 cut(s)	40, 254
NgoMIV	GCCGGC	1 cut(s)	503
NlaIII	CATG	7 cut(s)	225, 481, 575, 656, 686, 1009, 1091
NlaIV	GGNNCC	4 cut(s)	141, 203, 525, 954
NmeAIII	GCCGAG	1 cut(s)	515
NmuCI	GTSAC	3 cut(s)	208, 346, 584
NspI	RCATGY	3 cut(s)	575, 656, 1009
PaeI	GCATGC	2 cut(s)	575, 656
PciI	ACATGT	1 cut(s)	1005
PciSI	GCTCTTC	2 cut(s)	368, 1023
PcsI	WCGNNNNNNNCGW	2 cut(s)	457, 766
PctI	GAATGC	2 cut(s)	705, 915
PdiI	GCCGGC	1 cut(s)	505
PdmI	GAANNNNTTC	1 cut(s)	32
PfeI	GAWTC	4 cut(s)	93, 123, 474, 811
PflMI	CCANNNNNTGG	2 cut(s)	670, 904
PkrI	GCNGC	9 cut(s)	48, 267, 277, 354, 455, 458, 553, 669, 750
PleI	GAGTC	3 cut(s)	205, 353, 377
PpsI	GAGTC	3 cut(s)	205, 353, 377
PscI	ACATGT	1 cut(s)	1005
Psp124BI	GAGCTC	2 cut(s)	363, 933
Psp6I	CCWGG	2 cut(s)	204, 778
PspEI	GGTNACC	1 cut(s)	725
PspFI	CCCAGC	1 cut(s)	701
PspGI	CCWGG	2 cut(s)	204, 778
PspN4I	GGNNCC	4 cut(s)	141, 203, 525, 954
PspPI	GGNCC	4 cut(s)	139, 202, 267, 679
PstI	CTGCAG	2 cut(s)	458, 943
PstNI	CAGNNNCTG	1 cut(s)	670
PvuII	CAGCTG	1 cut(s)	818
RsaI	GTAC	2 cut(s)	632, 1131
RsaNI	GTAC	2 cut(s)	631, 1130
RseI	CAYNNNNRTG	1 cut(s)	1092
SacI	GAGCTC	2 cut(s)	363, 933
SalI	GTCGAC	1 cut(s)	189
SapI	GCTCTTC	2 cut(s)	368, 1023
SatI	GCNGC	9 cut(s)	47, 266, 276, 353, 454, 457, 552, 668, 749
Sau3AI	GATC	2 cut(s)	40, 254
Sau96I	GGNCC	4 cut(s)	139, 202, 267, 679
SchI	GAGTC	3 cut(s)	205, 354, 377
ScrFI	CCNGG	3 cut(s)	200, 206, 780
SduI	GDGCHC	3 cut(s)	320, 363, 933
SfaNI	GCATC	1 cut(s)	613
SfcI	CTRYAG	3 cut(s)	454, 939, 1021
SinI	GGWCC	2 cut(s)	139, 679
SmiMI	CAYNNNNRTG	1 cut(s)	1092
SmlI	CTYRAG	1 cut(s)	178
SmoI	CTYRAG	1 cut(s)	178
SpeI	ACTAGT	1 cut(s)	799
SphI	GCATGC	2 cut(s)	575, 656
Sse9I	AATT	7 cut(s)	592, 696, 789, 978, 1068, 1125, 1138
SsiI	CCGC	8 cut(s)	74, 144, 265, 276, 355, 628, 667, 717
SspMI	CTAG	4 cut(s)	171, 486, 800, 1147
SstI	GAGCTC	2 cut(s)	363, 933
StyD4I	CCNGG	3 cut(s)	198, 204, 778
TaaI	ACNGT	1 cut(s)	548
TaqI	TCGA	5 cut(s)	91, 190, 596, 645, 760
TasI	AATT	7 cut(s)	592, 696, 789, 978, 1068, 1125, 1138
TatI	WGTACW	1 cut(s)	1129
TauI	GCSGC	3 cut(s)	268, 278, 670
TfiI	GAWTC	4 cut(s)	93, 123, 474, 811
TscAI	CASTG	3 cut(s)	586, 905, 1044
TseFI	GTSAC	3 cut(s)	208, 346, 584
TseI	GCWGC	6 cut(s)	46, 352, 453, 456, 551, 748
Tsp45I	GTSAC	3 cut(s)	208, 346, 584
TspDTI	ATGAA	4 cut(s)	210, 629, 746, 1102
TspRI	CASTG	3 cut(s)	586, 905, 1044
Van91I	CCANNNNNTGG	2 cut(s)	670, 904
VpaK11BI	GGWCC	2 cut(s)	139, 679
XapI	RAATTY	2 cut(s)	592, 696
XceI	RCATGY	3 cut(s)	575, 656, 1009
XmiI	GTMKAC	1 cut(s)	190
XmnI	GAANNNNTTC	1 cut(s)	32
XspI	CTAG	4 cut(s)	171, 486, 800, 1147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.