Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0008447

Physical Location & Seq

Genomic Coordinates Forward (+)

2478173 .. 2482609

Gene Structure 4437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0034900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGAGGCTGCTGTGGAAAAATCTTATTATGGAGATCAAGAACAGGAAGAGAAGAGAGTAGTACTGCTTGAATCTAGGACTGCTACTGCTACTGCTCTTGATGATGATCATCATGGAGAAGGTCGTTATAGCAAAGAAGAACTTGTTGTCAAAGCTGGAAATGAAGGAGCAGGACAGGAGAATAACGAAATGAAATCATCTTCACCAAACCAAAAAGATTTGAGTTGCGGCAAGCAGATATCAACCACGAGCAACATAAAAGGGTCCTCTTCGGTTGAACCTGATCATTCAGTGGCTTCTACTTCGTCAAGCCTAAAGGAACAGGATTATCAGTTAGAATCTGCTAGGGCCGAAATGGGTGAGGTGAGAGAAGAAAACCAAAGGCTGAAGAAGAACTTAGACCGAATGATGGAGGACTACCAAACACTCCAAATGCAGTACCATGACATTCAACAGAAAGCAATTAAATCCAGTAAGGATGACAATGCAACCAATAATCATCAAGACGACGATGAATCCGAGCAGCTTGTCTCCCTCAGCCTCGGATCTTTTTCCAGCAAAAGGAAAAAGGTCGAGGAAAAGAACAAAAGCCCTAGTACTCAAGTAGGGAAAGAAAAGGATACAGATGATGAAAAGAGCTTGTCTTTGGGACTAGACTGCAAATATGAAGCACCTGCTAAATCAAGTAGTACTACAACTGATCAGGTGCCCTTGTCAAACCCTAGCCCTGCAAACAGCGTTGAAGAAGTACGCAAAGAAGAAGCAGGCGAGACATGGCCACCGAAAAAAGTTCTCAAGACCATGAGAAGTATAGAAGATGAAGTTGCGCAGCAGAACCCAGTAAAAAAAGCTAGGGTTTCAGTCAGGGCTAGATGTGACACCCCAACGATGAATGATGGATGCCAGTGGAGGAAATATGGACAGAAGATTGCAAAAGGAAACCCTTGCCCTAGAGCATACTATCGTTGCACCATTGCACCATCATGTCCAGTAAGGAAACAGGTGCAAAGATGCGCGGATGACATGTCCATCTTAATCACCACGTACGAAGGAGCACACAATCACCCACTTCCACTGTCAGCCACCGCCATGGCTTCCACCACCTCTGCTGCCGCTTCCATGCTGCTGTCCGGCTCATCATCCAGCTCGTCCCTGCCTGGCCTGAACCCCTCGGCTGGGGCCACAACTGCGGCTGCTGACCTTCGTGGATACAATTACTATGTTTCGGATAACTCAAGATCGAGATTCTACATACCCAACTCTTCCATGTCATCTTCACTACCAACCATCACCTTGGACCTCACTTCAAACCCATCCTCCTCTTCCTCATCCCAGTTGAATAAATTTGCTTCATCAACTTTAAATTCTGCCCACCAAGTACCATACCCTCCCACCAGCCTCAACTTTGGTTCTTCTGATCAATCCAACAACACCATGCCATGGACTAACAGTGGGTTCCTTTCCCATGGAAATGGGACCCAGTTACCCTACAACAACAAGAATCCTATTATTGGAAGGCAGCAGCAGCAGCAGCAGCCTATGCAAAACAGCATGTACCAAAACTACATGCAGAAGAACAATCCAACTCCTCAACAGTTTCAGTTACCGGATCCGATTGCGGCAGCAACAAAGGCAATTACAGCGGATCCAAGTTTCCAATCTGCCCTAGCAGCCGCACTTACATCAATCATTGGCGGTAGTAGTAATGGTGGGAGTGGAAGTAGCAATAATAATCAGAATGCAGGTGGAGATCACTTTAATAACATCATGGCTCAGAAATTGAAATGGGGTGAGCACTTCCCGGGAATTAGTAGTAGTAACGGTGCTACTGCTGCTTCCTATCTGCAAACAGCAATTAAAGGGAACAATATTACTGGATGTGCATCAAGCTATTTGAACAAACCGAATTCTTCATCTGTGAATATTTCGCAGCCCGGGAGTTTGATGTTTCTGCAGCCACCTAATTCATTGCCATTTGCCACCCACAAGAGTGCGTCTACATCTCCGAGTGAAGATCACAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000706 GO:0000729 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0003916 GO:0003918 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007275 GO:0008094 GO:0008150 GO:0008152 GO:0009553 GO:0009555 GO:0009791 GO:0009987 GO:0010154 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0016889 GO:0016894 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0035825 GO:0042138 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061458 GO:0061505 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04113 map04113

Pfam Domains

Protein Families

TP6A_N

Protein Analysis

675

Amino Acids

72.98

Weight (kDa)

6.39

Isoelectric Point (pI)

49.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	298 - 356	3.2e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63990 AT1G63990
fragaria_vesca	FvH4_5g03200 FvH4_5g03200 FvH4_5g03200 FvH4_5g03200 FvH4_5g03200
malus_domestica	MD14G1112000.v1.1
prunus_persica	Prupe.5G106600_v2.0.a1
pyrus_communis	pycom14g10670
rosa_chinensis	RchiOBHm_Chr7g0196581
rosa_multiflora	Rmu_co8280957.1_g000001 Rmu_sc0006080.1_g000002 Rmu_sc0040598.1_g000001 Rmu_sc0040599.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259190
rosa_rugosa	Rorug07G0034800 Rorug07G0034900
rosa_samantha	Rh7AG158900 Rh7BG160900 Rh7CG167300 Rh7DG160100
rosa_wichuraiana	Rw7G013890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	682, 1733
Acc16I	TGCGCA	1 cut(s)	828
Acc36I	ACCTGC	2 cut(s)	682, 1733
AccB1I	GGYRCC	1 cut(s)	706
AccB7I	CCANNNNNTGG	1 cut(s)	1440
AccI	GTMKAC	1 cut(s)	1997
AccII	CGCG	1 cut(s)	1016
AciI	CCGC	9 cut(s)	228, 1016, 1086, 1113, 1190, 1619, 1643, 1674, 1695
AclWI	GGATC	5 cut(s)	553, 1604, 1617, 1640, 1653
AcoI	YGGCCR	1 cut(s)	776
AcsI	RAATTY	3 cut(s)	1343, 1363, 1906
AcuI	CTGAAG	1 cut(s)	407
AfaI	GTAC	8 cut(s)	63, 440, 598, 691, 750, 1046, 1380, 1556
AfiI	CCNNNNNNNGG	6 cut(s)	409, 561, 1175, 1176, 1440, 1511
AflIII	ACRYGT	1 cut(s)	1023
AgsI	TTSAA	8 cut(s)	71, 278, 452, 743, 1308, 1339, 1783, 1897
AjnI	CCWGG	1 cut(s)	1156
AleI	CACNNNNGTG	1 cut(s)	1989
AluBI	AGCT	6 cut(s)	155, 526, 639, 851, 1146, 1890
AluI	AGCT	6 cut(s)	155, 526, 639, 851, 1146, 1890
Alw21I	GWGCWC	2 cut(s)	1057, 1797
Alw26I	GTCTC	2 cut(s)	535, 764
AlwI	GGATC	5 cut(s)	553, 1604, 1617, 1640, 1653
Ama87I	CYCGRG	2 cut(s)	1801, 1934
AoxI	GGCC	4 cut(s)	348, 776, 1159, 1179
ApoI	RAATTY	3 cut(s)	1343, 1363, 1906
AspLEI	GCGC	2 cut(s)	829, 1016
AspS9I	GGNCC	5 cut(s)	264, 348, 1179, 1297, 1476
AsuC2I	CCSGG	4 cut(s)	1802, 1803, 1935, 1936
AsuHPI	GGTGA	7 cut(s)	195, 371, 376, 1030, 1055, 1282, 1802
AvaI	CYCGRG	2 cut(s)	1801, 1934
AvaII	GGWCC	3 cut(s)	264, 1297, 1476
BaeGI	GKGCMC	1 cut(s)	711
BalI	TGGCCA	1 cut(s)	778
BamHI	GGATCC	2 cut(s)	1609, 1645
BanI	GGYRCC	1 cut(s)	706
BauI	CACGAG	1 cut(s)	247
Bbv12I	GWGCWC	2 cut(s)	1057, 1797
BbvCI	CCTCAGC	1 cut(s)	536
BccI	CCATC	6 cut(s)	403, 890, 988, 1037, 1295, 1321
BciT130I	CCWGG	1 cut(s)	1158
BciVI	GTATCC	2 cut(s)	613, 1202
BclI	TGATCA	4 cut(s)	106, 283, 700, 1417
BcnI	CCSGG	4 cut(s)	1802, 1803, 1935, 1936
BcoDI	GTCTC	2 cut(s)	535, 764
BfaI	CTAG	9 cut(s)	75, 345, 594, 653, 723, 852, 870, 951, 1667
BfmI	CTRYAG	1 cut(s)	1952
BfuAI	ACCTGC	2 cut(s)	682, 1733
BfuI	GTATCC	2 cut(s)	613, 1202
BmcAI	AGTACT	3 cut(s)	63, 598, 691
Bme1390I	CCNGG	5 cut(s)	1158, 1802, 1803, 1935, 1936
Bme18I	GGWCC	3 cut(s)	264, 1297, 1476
BmeT110I	CYCGRG	2 cut(s)	1801, 1934
BmgT120I	GGNCC	5 cut(s)	264, 348, 1179, 1297, 1476
BmiI	GGNNCC	8 cut(s)	265, 708, 1180, 1457, 1477, 1478, 1611, 1647
BmrFI	CCNGG	5 cut(s)	1158, 1802, 1803, 1935, 1936
BmrI	ACTGGG	3 cut(s)	833, 1327, 1474
BmsI	GCATC	3 cut(s)	890, 1001, 1892
BmuI	ACTGGG	3 cut(s)	833, 1327, 1474
Bpu10I	CCTNAGC	1 cut(s)	536
BpuEI	CTTGAG	3 cut(s)	585, 779, 1219
BpuMI	CCSGG	4 cut(s)	1802, 1803, 1935, 1936
BsaAI	YACGTR	1 cut(s)	1044
BsaBI	GATNNNNATC	3 cut(s)	105, 108, 1882
BsaJI	CCNNGG	8 cut(s)	541, 1089, 1170, 1293, 1439, 1465, 1801, 1934
BsaWI	WCCGGW	1 cut(s)	1606
BsaXI	ACNNNNNCTCC	4 cut(s)	1301, 1331, 1705, 1735
Bsc4I	CCNNNNNNNGG	6 cut(s)	409, 561, 1175, 1176, 1440, 1511
Bse1I	ACTGG	7 cut(s)	471, 839, 904, 989, 1333, 1480, 1879
Bse3DI	GCAATG	2 cut(s)	972, 1967
Bse8I	GATNNNNATC	3 cut(s)	105, 108, 1882
BseBI	CCWGG	1 cut(s)	1158
BseDI	CCNNGG	8 cut(s)	541, 1089, 1170, 1293, 1439, 1465, 1801, 1934
BseGI	GGATG	7 cut(s)	484, 905, 1024, 1139, 1313, 1328, 1883
BseJI	GATNNNNATC	3 cut(s)	105, 108, 1882
BseLI	CCNNNNNNNGG	6 cut(s)	409, 561, 1175, 1176, 1440, 1511
BseMI	GCAATG	2 cut(s)	972, 1967
BseMII	CTCAG	2 cut(s)	550, 1787
BseNI	ACTGG	7 cut(s)	471, 839, 904, 989, 1333, 1480, 1879
BseRI	GAGGAG	2 cut(s)	1309, 1578
BseSI	GKGCMC	1 cut(s)	711
BseYI	CCCAGC	1 cut(s)	1175
Bsh1236I	CGCG	1 cut(s)	1016
BshFI	GGCC	4 cut(s)	350, 778, 1161, 1181
BshNI	GGYRCC	1 cut(s)	706
BsiHKAI	GWGCWC	2 cut(s)	1057, 1797
BsiHKCI	CYCGRG	2 cut(s)	1801, 1934
BsiSI	CCGG	4 cut(s)	1131, 1607, 1802, 1935
BsiWI	CGTACG	1 cut(s)	1044
BslFI	GGGAC	3 cut(s)	663, 1135, 1489
BslI	CCNNNNNNNGG	6 cut(s)	409, 561, 1175, 1176, 1440, 1511
BsmAI	GTCTC	2 cut(s)	535, 764
BsmFI	GGGAC	3 cut(s)	663, 1135, 1489
BsmI	GAATGC	1 cut(s)	1744
BsnI	GGCC	4 cut(s)	350, 778, 1161, 1181
BsoBI	CYCGRG	2 cut(s)	1801, 1934
Bsp1286I	GDGCHC	3 cut(s)	711, 1057, 1797
Bsp19I	CCATGG	3 cut(s)	1089, 1439, 1465
BspACI	CCGC	9 cut(s)	228, 1016, 1086, 1113, 1190, 1619, 1643, 1674, 1695
BspANI	GGCC	4 cut(s)	350, 778, 1161, 1181
BspCNI	CTCAG	2 cut(s)	549, 1786
BspFNI	CGCG	1 cut(s)	1016
BspLI	GGNNCC	8 cut(s)	265, 708, 1180, 1457, 1477, 1478, 1611, 1647
BspMAI	CTGCAG	1 cut(s)	1956
BspMI	ACCTGC	2 cut(s)	682, 1733
BspPI	GGATC	5 cut(s)	553, 1604, 1617, 1640, 1653
BspT107I	GGYRCC	1 cut(s)	706
BsrDI	GCAATG	2 cut(s)	972, 1967
BsrI	ACTGG	7 cut(s)	471, 839, 904, 989, 1333, 1480, 1879
BssECI	CCNNGG	8 cut(s)	541, 1089, 1170, 1293, 1439, 1465, 1801, 1934
BssSI	CACGAG	1 cut(s)	247
BssT1I	CCWWGG	4 cut(s)	1089, 1293, 1439, 1465
Bst2BI	CACGAG	1 cut(s)	247
Bst2UI	CCWGG	1 cut(s)	1158
Bst4CI	ACNGT	4 cut(s)	1077, 1451, 1596, 1823
Bst6I	CTCTTC	5 cut(s)	42, 47, 274, 1267, 1327
BstAPI	GCANNNNNTGC	1 cut(s)	1540
BstBAI	YACGTR	1 cut(s)	1044
BstC8I	GCNNGC	2 cut(s)	233, 766
BstDEI	CTNAG	3 cut(s)	397, 536, 1773
BstDSI	CCRYGG	3 cut(s)	1089, 1439, 1465
BstF5I	GGATG	7 cut(s)	484, 905, 1024, 1139, 1313, 1328, 1883
BstFNI	CGCG	1 cut(s)	1016
BstHHI	GCGC	2 cut(s)	829, 1016
BstMAI	GTCTC	2 cut(s)	535, 764
BstNI	CCWGG	1 cut(s)	1158
BstNSI	RCATGY	3 cut(s)	1027, 1555, 1570
BstSCI	CCNGG	5 cut(s)	1156, 1800, 1801, 1933, 1934
BstSFI	CTRYAG	1 cut(s)	1952
BstSLI	GKGCMC	1 cut(s)	711
BstUI	CGCG	1 cut(s)	1016
BstX2I	RGATCY	3 cut(s)	545, 1609, 1645
BstXI	CCANNNNNNTGG	3 cut(s)	1090, 1294, 1472
BstYI	RGATCY	3 cut(s)	545, 1609, 1645
BsuI	GTATCC	2 cut(s)	613, 1202
BsuRI	GGCC	4 cut(s)	350, 778, 1161, 1181
BtgI	CCRYGG	3 cut(s)	1089, 1439, 1465
BtsCI	GGATG	7 cut(s)	484, 905, 1024, 1139, 1313, 1328, 1883
BtsIMutI	CAGTG	4 cut(s)	297, 911, 1073, 1456
BveI	ACCTGC	2 cut(s)	682, 1733
Cac8I	GCNNGC	2 cut(s)	233, 766
CfoI	GCGC	2 cut(s)	829, 1016
Cfr13I	GGNCC	5 cut(s)	264, 348, 1179, 1297, 1476
Cfr9I	CCCGGG	2 cut(s)	1801, 1934
CseI	GACGC	1 cut(s)	1983
Csp6I	GTAC	8 cut(s)	62, 439, 597, 690, 749, 1045, 1379, 1555
CviQI	GTAC	8 cut(s)	62, 439, 597, 690, 749, 1045, 1379, 1555
DdeI	CTNAG	3 cut(s)	397, 536, 1773
DraI	TTTAAA	1 cut(s)	1362
EaeI	YGGCCR	1 cut(s)	776
Eam1104I	CTCTTC	5 cut(s)	42, 47, 274, 1267, 1327
EarI	CTCTTC	5 cut(s)	42, 47, 274, 1267, 1327
Eco130I	CCWWGG	4 cut(s)	1089, 1293, 1439, 1465
Eco32I	GATATC	1 cut(s)	240
Eco47I	GGWCC	3 cut(s)	264, 1297, 1476
Eco57I	CTGAAG	1 cut(s)	407
Eco88I	CYCGRG	2 cut(s)	1801, 1934
EcoO109I	RGGNCCY	2 cut(s)	264, 1476
EcoRI	GAATTC	1 cut(s)	1906
EcoRII	CCWGG	1 cut(s)	1156
EcoRV	GATATC	1 cut(s)	240
EcoT14I	CCWWGG	4 cut(s)	1089, 1293, 1439, 1465
ErhI	CCWWGG	4 cut(s)	1089, 1293, 1439, 1465
FalI	AAGNNNNNCTT	4 cut(s)	126, 158, 380, 412
FaqI	GGGAC	3 cut(s)	663, 1135, 1489
FbaI	TGATCA	4 cut(s)	106, 283, 700, 1417
FblI	GTMKAC	1 cut(s)	1997
FokI	GGATG	7 cut(s)	491, 912, 1031, 1126, 1300, 1315, 1890
FspBI	CTAG	9 cut(s)	75, 345, 594, 653, 723, 852, 870, 951, 1667
FspI	TGCGCA	1 cut(s)	828
GlaI	GCGC	2 cut(s)	828, 1015
GsaI	CCCAGC	1 cut(s)	1179
HaeIII	GGCC	4 cut(s)	350, 778, 1161, 1181
HapII	CCGG	4 cut(s)	1131, 1607, 1802, 1935
HgaI	GACGC	1 cut(s)	1983
HhaI	GCGC	2 cut(s)	829, 1016
Hin6I	GCGC	2 cut(s)	827, 1014
HinP1I	GCGC	2 cut(s)	827, 1014
HinfI	GANTC	5 cut(s)	71, 338, 515, 1245, 1501
HpaII	CCGG	4 cut(s)	1131, 1607, 1802, 1935
HphI	GGTGA	7 cut(s)	195, 371, 376, 1030, 1055, 1282, 1802
Hpy166II	GTNNAC	1 cut(s)	1998
Hpy188I	TCNGA	8 cut(s)	520, 545, 1228, 1417, 1614, 1737, 1776, 2007
Hpy188III	TCNNGA	6 cut(s)	38, 98, 503, 796, 1236, 1242
Hpy8I	GTNNAC	1 cut(s)	1998
Hpy99I	CGWCG	1 cut(s)	512
HpyAV	CCTTC	5 cut(s)	113, 158, 1043, 1211, 1509
HpyCH4III	ACNGT	4 cut(s)	1077, 1451, 1596, 1823
HpyCH4IV	ACGT	1 cut(s)	1043
HpyF3I	CTNAG	3 cut(s)	397, 536, 1773
HpySE526I	ACGT	1 cut(s)	1043
HspAI	GCGC	2 cut(s)	827, 1014
KflI	GGGWCCC	1 cut(s)	1476
Ksp22I	TGATCA	4 cut(s)	106, 283, 700, 1417
LmnI	GCTCC	2 cut(s)	167, 1052
LweI	GCATC	3 cut(s)	890, 1001, 1892
MaeI	CTAG	9 cut(s)	75, 345, 594, 653, 723, 852, 870, 951, 1667
MaeII	ACGT	1 cut(s)	1043
MaeIII	GTNAC	4 cut(s)	875, 1482, 1602, 1817
MflI	RGATCY	3 cut(s)	545, 1609, 1645
MhlI	GDGCHC	3 cut(s)	711, 1057, 1797
MlsI	TGGCCA	1 cut(s)	778
MluNI	TGGCCA	1 cut(s)	778
MmeI	TCCRAC	2 cut(s)	1449, 1607
Mox20I	TGGCCA	1 cut(s)	778
MscI	TGGCCA	1 cut(s)	778
MseI	TTAA	5 cut(s)	465, 1034, 1361, 1758, 1857
MslI	CAYNNNNRTG	4 cut(s)	982, 1088, 1470, 1989
Msp20I	TGGCCA	1 cut(s)	778
MspA1I	CMGCKG	1 cut(s)	1643
MspI	CCGG	4 cut(s)	1131, 1607, 1802, 1935
MspR9I	CCNGG	5 cut(s)	1158, 1802, 1803, 1935, 1936
Mva1269I	GAATGC	1 cut(s)	1744
MvaI	CCWGG	1 cut(s)	1158
MvnI	CGCG	1 cut(s)	1016
NciI	CCSGG	4 cut(s)	1802, 1803, 1935, 1936
NcoI	CCATGG	3 cut(s)	1089, 1439, 1465
NlaIV	GGNNCC	8 cut(s)	265, 708, 1180, 1457, 1477, 1478, 1611, 1647
NmeAIII	GCCGAG	1 cut(s)	1151
NmuCI	GTSAC	1 cut(s)	875
NsbI	TGCGCA	1 cut(s)	828
NspI	RCATGY	3 cut(s)	1027, 1555, 1570
OliI	CACNNNNGTG	1 cut(s)	1989
PaqCI	CACCTGC	2 cut(s)	682, 1733
PciI	ACATGT	1 cut(s)	1023
PcsI	WCGNNNNNNNCGW	1 cut(s)	516
PctI	GAATGC	1 cut(s)	1744
PfeI	GAWTC	5 cut(s)	71, 338, 515, 1245, 1501
Pfl23II	CGTACG	1 cut(s)	1044
PflMI	CCANNNNNTGG	1 cut(s)	1440
Ppu21I	YACGTR	1 cut(s)	1044
PpuMI	RGGWCCY	2 cut(s)	264, 1476
PscI	ACATGT	1 cut(s)	1023
Psp5II	RGGWCCY	2 cut(s)	264, 1476
Psp6I	CCWGG	1 cut(s)	1156
PspFI	CCCAGC	1 cut(s)	1175
PspGI	CCWGG	1 cut(s)	1156
PspLI	CGTACG	1 cut(s)	1044
PspN4I	GGNNCC	8 cut(s)	265, 708, 1180, 1457, 1477, 1478, 1611, 1647
PspPI	GGNCC	5 cut(s)	264, 348, 1179, 1297, 1476
PspPPI	RGGWCCY	2 cut(s)	264, 1476
PstI	CTGCAG	1 cut(s)	1956
PsuI	RGATCY	3 cut(s)	545, 1609, 1645
RsaI	GTAC	8 cut(s)	63, 440, 598, 691, 750, 1046, 1380, 1556
RsaNI	GTAC	8 cut(s)	62, 439, 597, 690, 749, 1045, 1379, 1555
RseI	CAYNNNNRTG	4 cut(s)	982, 1088, 1470, 1989
SaqAI	TTAA	5 cut(s)	465, 1034, 1361, 1758, 1857
Sau96I	GGNCC	5 cut(s)	264, 348, 1179, 1297, 1476
ScaI	AGTACT	3 cut(s)	63, 598, 691
ScrFI	CCNGG	5 cut(s)	1158, 1802, 1803, 1935, 1936
SduI	GDGCHC	3 cut(s)	711, 1057, 1797
SfaNI	GCATC	3 cut(s)	890, 1001, 1892
SfcI	CTRYAG	1 cut(s)	1952
SinI	GGWCC	3 cut(s)	264, 1297, 1476
SmaI	CCCGGG	2 cut(s)	1803, 1936
SmiMI	CAYNNNNRTG	4 cut(s)	982, 1088, 1470, 1989
SmlI	CTYRAG	3 cut(s)	600, 794, 1234
SmoI	CTYRAG	3 cut(s)	600, 794, 1234
SsiI	CCGC	9 cut(s)	228, 1016, 1086, 1113, 1190, 1619, 1643, 1674, 1695
SspI	AATATT	2 cut(s)	1870, 1924
SspMI	CTAG	9 cut(s)	75, 345, 594, 653, 723, 852, 870, 951, 1667
StyD4I	CCNGG	5 cut(s)	1156, 1800, 1801, 1933, 1934
StyI	CCWWGG	4 cut(s)	1089, 1293, 1439, 1465
TaaI	ACNGT	4 cut(s)	1077, 1451, 1596, 1823
TaiI	ACGT	1 cut(s)	1046
TaqI	TCGA	2 cut(s)	573, 1241
TaqII	GACCGA	1 cut(s)	417
TatI	WGTACW	3 cut(s)	61, 596, 689
TauI	GCSGC	5 cut(s)	231, 1115, 1193, 1622, 1676
TfiI	GAWTC	5 cut(s)	71, 338, 515, 1245, 1501
Tru1I	TTAA	5 cut(s)	465, 1034, 1361, 1758, 1857
Tru9I	TTAA	5 cut(s)	465, 1034, 1361, 1758, 1857
TscAI	CASTG	4 cut(s)	297, 911, 1080, 1456
TseFI	GTSAC	1 cut(s)	875
Tsp45I	GTSAC	1 cut(s)	875
TspMI	CCCGGG	2 cut(s)	1801, 1934
TspRI	CASTG	4 cut(s)	297, 911, 1080, 1456
Van91I	CCANNNNNTGG	1 cut(s)	1440
VpaK11BI	GGWCC	3 cut(s)	264, 1297, 1476
XapI	RAATTY	3 cut(s)	1343, 1363, 1906
XceI	RCATGY	3 cut(s)	1027, 1555, 1570
XmaI	CCCGGG	2 cut(s)	1801, 1934
XmiI	GTMKAC	1 cut(s)	1997
XspI	CTAG	9 cut(s)	75, 345, 594, 653, 723, 852, 870, 951, 1667
ZrmI	AGTACT	3 cut(s)	63, 598, 691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.