Domain of unknown function (DUF4149)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22600 AT1G72100 |
| fragaria_vesca | FvH4_5g31970 |
| malus_domestica | MD15G1396400.v1.1 MD15G1407700.v1.1 |
| prunus_persica | Prupe.1G554000_v2.0.a1 |
| pyrus_communis | pycom15g36370 |
| rosa_chinensis | RchiOBHm_Chr7g0227991 |
| rosa_laevigata | RLG00000001601 |
| rosa_multiflora | Rmu_co8508245.1_g000001 Rmu_sc0006493.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00231680 |
| rosa_rugosa | Rorug07G0244900 |
| rosa_samantha | Rh7AG398000 Rh7AG398300 Rh7AG398800 Rh7BG380100 Rh7CG416400 Rh7CG416900 Rh7DG394400 |
| rosa_wichuraiana | Rw7G033150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1481 |
| AccBSI | CCGCTC | 1 cut(s) | 1507 |
| AccI | GTMKAC | 1 cut(s) | 1692 |
| AccII | CGCG | 4 cut(s) | 47, 308, 416, 1259 |
| AccIII | TCCGGA | 1 cut(s) | 886 |
| AclWI | GGATC | 4 cut(s) | 156, 201, 1100, 1407 |
| AcoI | YGGCCR | 3 cut(s) | 202, 376, 1266 |
| AcsI | RAATTY | 2 cut(s) | 51, 1633 |
| AcuI | CTGAAG | 1 cut(s) | 1460 |
| AcyI | GRCGYC | 3 cut(s) | 248, 609, 1341 |
| AfaI | GTAC | 2 cut(s) | 143, 1273 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 326, 1023 |
| AflII | CTTAAG | 1 cut(s) | 841 |
| AflIII | ACRYGT | 2 cut(s) | 414, 892 |
| AgsI | TTSAA | 6 cut(s) | 475, 770, 877, 1182, 1306, 1390 |
| AhlI | ACTAGT | 1 cut(s) | 37 |
| AjnI | CCWGG | 1 cut(s) | 330 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1427, 1459 |
| AleI | CACNNNNGTG | 1 cut(s) | 1421 |
| AluBI | AGCT | 5 cut(s) | 219, 403, 626, 884, 1630 |
| AluI | AGCT | 5 cut(s) | 219, 403, 626, 884, 1630 |
| Alw21I | GWGCWC | 2 cut(s) | 628, 969 |
| Alw26I | GTCTC | 9 cut(s) | 184, 449, 473, 494, 560, 734, 917, 950, 1200 |
| AlwI | GGATC | 4 cut(s) | 156, 201, 1100, 1407 |
| Ama87I | CYCGRG | 2 cut(s) | 61, 1197 |
| Aor13HI | TCCGGA | 1 cut(s) | 886 |
| ApeKI | GCWGC | 4 cut(s) | 656, 938, 971, 1722 |
| ApoI | RAATTY | 2 cut(s) | 51, 1633 |
| AseI | ATTAAT | 1 cut(s) | 1667 |
| AspLEI | GCGC | 1 cut(s) | 47 |
| AspS9I | GGNCC | 3 cut(s) | 57, 267, 1294 |
| AsuC2I | CCSGG | 2 cut(s) | 991, 1120 |
| AsuHPI | GGTGA | 2 cut(s) | 271, 1435 |
| AsuII | TTCGAA | 1 cut(s) | 353 |
| AvaI | CYCGRG | 2 cut(s) | 61, 1197 |
| AvaII | GGWCC | 1 cut(s) | 57 |
| AxyI | CCTNAGG | 1 cut(s) | 1587 |
| BaeGI | GKGCMC | 1 cut(s) | 123 |
| BalI | TGGCCA | 2 cut(s) | 378, 1268 |
| BanI | GGYRCC | 1 cut(s) | 1481 |
| BanII | GRGCYC | 2 cut(s) | 68, 628 |
| Bbv12I | GWGCWC | 2 cut(s) | 628, 969 |
| BbvI | GCAGC | 4 cut(s) | 643, 950, 958, 1709 |
| BccI | CCATC | 8 cut(s) | 191, 194, 368, 1219, 1258, 1276, 1305, 1372 |
| BceAI | ACGGC | 2 cut(s) | 585, 596 |
| BciT130I | CCWGG | 1 cut(s) | 332 |
| BciVI | GTATCC | 2 cut(s) | 700, 745 |
| BcnI | CCSGG | 2 cut(s) | 991, 1120 |
| BcoDI | GTCTC | 9 cut(s) | 184, 449, 473, 494, 560, 734, 917, 950, 1200 |
| BcuI | ACTAGT | 1 cut(s) | 37 |
| BfaI | CTAG | 2 cut(s) | 38, 1688 |
| BfmI | CTRYAG | 1 cut(s) | 385 |
| BfrI | CTTAAG | 1 cut(s) | 841 |
| BfuI | GTATCC | 2 cut(s) | 700, 745 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 653 |
| BlpI | GCTNAGC | 2 cut(s) | 1503, 1701 |
| BmcAI | AGTACT | 1 cut(s) | 1273 |
| Bme1390I | CCNGG | 3 cut(s) | 332, 991, 1120 |
| Bme18I | GGWCC | 1 cut(s) | 57 |
| BmeT110I | CYCGRG | 2 cut(s) | 61, 1197 |
| BmgT120I | GGNCC | 3 cut(s) | 57, 267, 1294 |
| BmiI | GGNNCC | 3 cut(s) | 59, 1407, 1483 |
| BmrFI | CCNGG | 3 cut(s) | 332, 991, 1120 |
| BmsI | GCATC | 3 cut(s) | 589, 709, 1693 |
| Bpu10I | CCTNAGC | 1 cut(s) | 627 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1503, 1701 |
| Bpu14I | TTCGAA | 1 cut(s) | 353 |
| BpuEI | CTTGAG | 1 cut(s) | 1607 |
| BpuMI | CCSGG | 2 cut(s) | 991, 1120 |
| BsaBI | GATNNNNATC | 1 cut(s) | 723 |
| BsaHI | GRCGYC | 3 cut(s) | 248, 609, 1341 |
| BsaI | GGTCTC | 3 cut(s) | 184, 449, 950 |
| BsaWI | WCCGGW | 1 cut(s) | 886 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 87, 117, 576, 606, 1525, 1555, 1555, 1585 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 326, 1023 |
| Bse118I | RCCGGY | 1 cut(s) | 443 |
| Bse1I | ACTGG | 2 cut(s) | 1216, 1269 |
| Bse21I | CCTNAGG | 1 cut(s) | 1587 |
| Bse3DI | GCAATG | 1 cut(s) | 807 |
| Bse8I | GATNNNNATC | 1 cut(s) | 723 |
| BseAI | TCCGGA | 1 cut(s) | 886 |
| BseBI | CCWGG | 1 cut(s) | 332 |
| BseGI | GGATG | 3 cut(s) | 1015, 1230, 1287 |
| BseJI | GATNNNNATC | 1 cut(s) | 723 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 326, 1023 |
| BseMI | GCAATG | 1 cut(s) | 807 |
| BseMII | CTCAG | 6 cut(s) | 587, 641, 1115, 1494, 1560, 1601 |
| BseNI | ACTGG | 2 cut(s) | 1216, 1269 |
| BseSI | GKGCMC | 1 cut(s) | 123 |
| BseXI | GCAGC | 4 cut(s) | 643, 950, 958, 1709 |
| BsgI | GTGCAG | 4 cut(s) | 468, 534, 642, 1250 |
| Bsh1236I | CGCG | 4 cut(s) | 47, 308, 416, 1259 |
| BshNI | GGYRCC | 1 cut(s) | 1481 |
| BsiHKAI | GWGCWC | 2 cut(s) | 628, 969 |
| BsiHKCI | CYCGRG | 2 cut(s) | 61, 1197 |
| BsiSI | CCGG | 4 cut(s) | 444, 887, 990, 1119 |
| BslFI | GGGAC | 3 cut(s) | 43, 348, 1538 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 326, 1023 |
| BsmAI | GTCTC | 9 cut(s) | 184, 449, 473, 494, 560, 734, 917, 950, 1200 |
| BsmBI | CGTCTC | 2 cut(s) | 560, 734 |
| BsmFI | GGGAC | 3 cut(s) | 43, 348, 1538 |
| BsmI | GAATGC | 2 cut(s) | 940, 1510 |
| Bso31I | GGTCTC | 3 cut(s) | 184, 449, 950 |
| BsoBI | CYCGRG | 2 cut(s) | 61, 1197 |
| Bsp119I | TTCGAA | 1 cut(s) | 353 |
| Bsp1286I | GDGCHC | 4 cut(s) | 68, 123, 628, 969 |
| Bsp13I | TCCGGA | 1 cut(s) | 886 |
| Bsp143I | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1503, 1701 |
| Bsp19I | CCATGG | 1 cut(s) | 960 |
| BspCNI | CTCAG | 6 cut(s) | 586, 640, 1116, 1495, 1559, 1600 |
| BspEI | TCCGGA | 1 cut(s) | 886 |
| BspFNI | CGCG | 4 cut(s) | 47, 308, 416, 1259 |
| BspLI | GGNNCC | 3 cut(s) | 59, 1407, 1483 |
| BspPI | GGATC | 4 cut(s) | 156, 201, 1100, 1407 |
| BspQI | GCTCTTC | 1 cut(s) | 691 |
| BspT104I | TTCGAA | 1 cut(s) | 353 |
| BspT107I | GGYRCC | 1 cut(s) | 1481 |
| BspTI | CTTAAG | 1 cut(s) | 841 |
| BspTNI | GGTCTC | 3 cut(s) | 184, 449, 950 |
| BsrBI | CCGCTC | 1 cut(s) | 1507 |
| BsrDI | GCAATG | 1 cut(s) | 807 |
| BsrFI | RCCGGY | 1 cut(s) | 443 |
| BsrI | ACTGG | 2 cut(s) | 1216, 1269 |
| BssAI | RCCGGY | 1 cut(s) | 443 |
| BssMI | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| BssNAI | GTATAC | 1 cut(s) | 1693 |
| BssNI | GRCGYC | 3 cut(s) | 248, 609, 1341 |
| BssT1I | CCWWGG | 7 cut(s) | 174, 255, 270, 343, 648, 702, 960 |
| Bst1107I | GTATAC | 1 cut(s) | 1693 |
| Bst2UI | CCWGG | 1 cut(s) | 332 |
| Bst4CI | ACNGT | 5 cut(s) | 679, 712, 745, 928, 1276 |
| Bst6I | CTCTTC | 4 cut(s) | 691, 1045, 1456, 1462 |
| BstACI | GRCGYC | 3 cut(s) | 248, 609, 1341 |
| BstAFI | CTTAAG | 1 cut(s) | 841 |
| BstBI | TTCGAA | 1 cut(s) | 353 |
| BstC8I | GCNNGC | 4 cut(s) | 431, 645, 969, 1368 |
| BstDEI | CTNAG | 8 cut(s) | 573, 627, 1124, 1419, 1503, 1546, 1587, 1701 |
| BstDSI | CCRYGG | 1 cut(s) | 960 |
| BstF5I | GGATG | 3 cut(s) | 1015, 1230, 1287 |
| BstFNI | CGCG | 4 cut(s) | 47, 308, 416, 1259 |
| BstHHI | GCGC | 1 cut(s) | 47 |
| BstKTI | GATC | 6 cut(s) | 73, 151, 196, 525, 1108, 1415 |
| BstMAI | GTCTC | 9 cut(s) | 184, 449, 473, 494, 560, 734, 917, 950, 1200 |
| BstMBI | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| BstNI | CCWGG | 1 cut(s) | 332 |
| BstNSI | RCATGY | 3 cut(s) | 896, 1159, 1478 |
| BstSCI | CCNGG | 3 cut(s) | 330, 989, 1118 |
| BstSFI | CTRYAG | 1 cut(s) | 385 |
| BstSLI | GKGCMC | 1 cut(s) | 123 |
| BstUI | CGCG | 4 cut(s) | 47, 308, 416, 1259 |
| BstV1I | GCAGC | 4 cut(s) | 643, 950, 958, 1709 |
| BstX2I | RGATCY | 1 cut(s) | 1412 |
| BstYI | RGATCY | 1 cut(s) | 1412 |
| BstZ17I | GTATAC | 1 cut(s) | 1693 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1587 |
| BsuI | GTATCC | 2 cut(s) | 700, 745 |
| BtgI | CCRYGG | 1 cut(s) | 960 |
| BtgZI | GCGATG | 1 cut(s) | 1277 |
| BtsCI | GGATG | 3 cut(s) | 1015, 1230, 1287 |
| BtsI | GCAGTG | 1 cut(s) | 1143 |
| BtsIMutI | CAGTG | 2 cut(s) | 933, 1143 |
| Cac8I | GCNNGC | 4 cut(s) | 431, 645, 969, 1368 |
| CfoI | GCGC | 1 cut(s) | 47 |
| Cfr10I | RCCGGY | 1 cut(s) | 443 |
| Cfr13I | GGNCC | 3 cut(s) | 57, 267, 1294 |
| CseI | GACGC | 5 cut(s) | 256, 297, 422, 617, 1349 |
| Csp6I | GTAC | 2 cut(s) | 142, 1272 |
| CviAII | CATG | 8 cut(s) | 488, 554, 761, 893, 961, 1156, 1187, 1475 |
| CviQI | GTAC | 2 cut(s) | 142, 1272 |
| DdeI | CTNAG | 8 cut(s) | 573, 627, 1124, 1419, 1503, 1546, 1587, 1701 |
| DpnI | GATC | 6 cut(s) | 72, 150, 195, 524, 1107, 1414 |
| DpnII | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| EaeI | YGGCCR | 3 cut(s) | 202, 376, 1266 |
| Eam1104I | CTCTTC | 4 cut(s) | 691, 1045, 1456, 1462 |
| EarI | CTCTTC | 4 cut(s) | 691, 1045, 1456, 1462 |
| EciI | GGCGGA | 1 cut(s) | 206 |
| Ecl136II | GAGCTC | 1 cut(s) | 626 |
| Eco130I | CCWWGG | 7 cut(s) | 174, 255, 270, 343, 648, 702, 960 |
| Eco147I | AGGCCT | 1 cut(s) | 348 |
| Eco24I | GRGCYC | 2 cut(s) | 68, 628 |
| Eco31I | GGTCTC | 3 cut(s) | 184, 449, 950 |
| Eco32I | GATATC | 1 cut(s) | 1057 |
| Eco47I | GGWCC | 1 cut(s) | 57 |
| Eco53kI | GAGCTC | 1 cut(s) | 626 |
| Eco57I | CTGAAG | 1 cut(s) | 1460 |
| Eco81I | CCTNAGG | 1 cut(s) | 1587 |
| Eco88I | CYCGRG | 2 cut(s) | 61, 1197 |
| EcoICRI | GAGCTC | 1 cut(s) | 626 |
| EcoO109I | RGGNCCY | 1 cut(s) | 267 |
| EcoRI | GAATTC | 1 cut(s) | 1633 |
| EcoRII | CCWGG | 1 cut(s) | 330 |
| EcoRV | GATATC | 1 cut(s) | 1057 |
| EcoT14I | CCWWGG | 7 cut(s) | 174, 255, 270, 343, 648, 702, 960 |
| EcoT22I | ATGCAT | 1 cut(s) | 604 |
| EcoT38I | GRGCYC | 2 cut(s) | 68, 628 |
| ErhI | CCWWGG | 7 cut(s) | 174, 255, 270, 343, 648, 702, 960 |
| Esp3I | CGTCTC | 2 cut(s) | 560, 734 |
| FaeI | CATG | 8 cut(s) | 491, 557, 764, 896, 964, 1159, 1190, 1478 |
| FaqI | GGGAC | 3 cut(s) | 43, 348, 1538 |
| FatI | CATG | 8 cut(s) | 487, 553, 760, 892, 960, 1155, 1186, 1474 |
| FauI | CCCGC | 2 cut(s) | 40, 1218 |
| FauNDI | CATATG | 1 cut(s) | 691 |
| FblI | GTMKAC | 1 cut(s) | 1692 |
| FokI | GGATG | 3 cut(s) | 1022, 1237, 1294 |
| FriOI | GRGCYC | 2 cut(s) | 68, 628 |
| FspBI | CTAG | 2 cut(s) | 38, 1688 |
| GlaI | GCGC | 1 cut(s) | 46 |
| HapII | CCGG | 4 cut(s) | 444, 887, 990, 1119 |
| HgaI | GACGC | 5 cut(s) | 256, 297, 422, 617, 1349 |
| HhaI | GCGC | 1 cut(s) | 47 |
| Hin1I | GRCGYC | 3 cut(s) | 248, 609, 1341 |
| Hin1II | CATG | 8 cut(s) | 491, 557, 764, 896, 964, 1159, 1190, 1478 |
| Hin6I | GCGC | 1 cut(s) | 45 |
| HinP1I | GCGC | 1 cut(s) | 45 |
| HincII | GTYRAC | 3 cut(s) | 1323, 1339, 1594 |
| HindII | GTYRAC | 3 cut(s) | 1323, 1339, 1594 |
| HinfI | GANTC | 2 cut(s) | 785, 1030 |
| HpaII | CCGG | 4 cut(s) | 444, 887, 990, 1119 |
| HphI | GGTGA | 2 cut(s) | 271, 1435 |
| Hpy166II | GTNNAC | 5 cut(s) | 793, 1323, 1339, 1594, 1693 |
| Hpy188I | TCNGA | 7 cut(s) | 576, 584, 619, 729, 751, 1549, 1617 |
| Hpy188III | TCNNGA | 5 cut(s) | 197, 526, 629, 887, 1624 |
| Hpy8I | GTNNAC | 5 cut(s) | 793, 1323, 1339, 1594, 1693 |
| Hpy99I | CGWCG | 4 cut(s) | 250, 313, 416, 611 |
| HpyAV | CCTTC | 6 cut(s) | 261, 469, 523, 571, 1451, 1553 |
| HpyCH4III | ACNGT | 5 cut(s) | 679, 712, 745, 928, 1276 |
| HpyCH4V | TGCA | 9 cut(s) | 429, 485, 551, 602, 659, 689, 938, 1231, 1711 |
| HpyF3I | CTNAG | 8 cut(s) | 573, 627, 1124, 1419, 1503, 1546, 1587, 1701 |
| Hsp92I | GRCGYC | 3 cut(s) | 248, 609, 1341 |
| Hsp92II | CATG | 8 cut(s) | 491, 557, 764, 896, 964, 1159, 1190, 1478 |
| HspAI | GCGC | 1 cut(s) | 45 |
| Kpn2I | TCCGGA | 1 cut(s) | 886 |
| Kzo9I | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| LguI | GCTCTTC | 1 cut(s) | 691 |
| LmnI | GCTCC | 5 cut(s) | 224, 889, 964, 1405, 1567 |
| Lsp1109I | GCAGC | 4 cut(s) | 643, 950, 958, 1709 |
| LweI | GCATC | 3 cut(s) | 589, 709, 1693 |
| MaeI | CTAG | 2 cut(s) | 38, 1688 |
| MaeIII | GTNAC | 3 cut(s) | 28, 259, 1012 |
| MalI | GATC | 6 cut(s) | 72, 150, 195, 524, 1107, 1414 |
| MbiI | CCGCTC | 1 cut(s) | 1507 |
| MboI | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| MflI | RGATCY | 1 cut(s) | 1412 |
| MhlI | GDGCHC | 4 cut(s) | 68, 123, 628, 969 |
| MlsI | TGGCCA | 2 cut(s) | 378, 1268 |
| MluCI | AATT | 3 cut(s) | 51, 872, 1633 |
| MluI | ACGCGT | 1 cut(s) | 414 |
| MluNI | TGGCCA | 2 cut(s) | 378, 1268 |
| MlyI | GAGTC | 1 cut(s) | 794 |
| MmeI | TCCRAC | 4 cut(s) | 255, 562, 616, 1425 |
| Mox20I | TGGCCA | 2 cut(s) | 378, 1268 |
| Mph1103I | ATGCAT | 1 cut(s) | 604 |
| MroI | TCCGGA | 1 cut(s) | 886 |
| MscI | TGGCCA | 2 cut(s) | 378, 1268 |
| MseI | TTAA | 6 cut(s) | 842, 897, 984, 1041, 1073, 1667 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1160, 1421, 1479 |
| Msp20I | TGGCCA | 2 cut(s) | 378, 1268 |
| MspA1I | CMGCKG | 1 cut(s) | 1100 |
| MspCI | CTTAAG | 1 cut(s) | 841 |
| MspI | CCGG | 4 cut(s) | 444, 887, 990, 1119 |
| MspR9I | CCNGG | 3 cut(s) | 332, 991, 1120 |
| Mva1269I | GAATGC | 2 cut(s) | 940, 1510 |
| MvaI | CCWGG | 1 cut(s) | 332 |
| MvnI | CGCG | 4 cut(s) | 47, 308, 416, 1259 |
| NciI | CCSGG | 2 cut(s) | 991, 1120 |
| NcoI | CCATGG | 1 cut(s) | 960 |
| NdeI | CATATG | 1 cut(s) | 691 |
| NdeII | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| NlaIII | CATG | 8 cut(s) | 491, 557, 764, 896, 964, 1159, 1190, 1478 |
| NlaIV | GGNNCC | 3 cut(s) | 59, 1407, 1483 |
| NmeAIII | GCCGAG | 2 cut(s) | 167, 1396 |
| NmuCI | GTSAC | 3 cut(s) | 28, 259, 1012 |
| NsiI | ATGCAT | 1 cut(s) | 604 |
| NspI | RCATGY | 3 cut(s) | 896, 1159, 1478 |
| NspV | TTCGAA | 1 cut(s) | 353 |
| OliI | CACNNNNGTG | 1 cut(s) | 1421 |
| PceI | AGGCCT | 1 cut(s) | 348 |
| PciI | ACATGT | 1 cut(s) | 892 |
| PciSI | GCTCTTC | 1 cut(s) | 691 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 615 |
| PctI | GAATGC | 2 cut(s) | 940, 1510 |
| PfeI | GAWTC | 1 cut(s) | 1030 |
| PleI | GAGTC | 1 cut(s) | 793 |
| PpsI | GAGTC | 1 cut(s) | 793 |
| PscI | ACATGT | 1 cut(s) | 892 |
| PshBI | ATTAAT | 1 cut(s) | 1667 |
| Psp124BI | GAGCTC | 1 cut(s) | 628 |
| Psp6I | CCWGG | 1 cut(s) | 330 |
| PspGI | CCWGG | 1 cut(s) | 330 |
| PspN4I | GGNNCC | 3 cut(s) | 59, 1407, 1483 |
| PspPI | GGNCC | 3 cut(s) | 57, 267, 1294 |
| PsuI | RGATCY | 1 cut(s) | 1412 |
| RsaI | GTAC | 2 cut(s) | 143, 1273 |
| RsaNI | GTAC | 2 cut(s) | 142, 1272 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1160, 1421, 1479 |
| SacI | GAGCTC | 1 cut(s) | 628 |
| SapI | GCTCTTC | 1 cut(s) | 691 |
| SaqAI | TTAA | 6 cut(s) | 842, 897, 984, 1041, 1073, 1667 |
| Sau3AI | GATC | 6 cut(s) | 70, 148, 193, 522, 1105, 1412 |
| Sau96I | GGNCC | 3 cut(s) | 57, 267, 1294 |
| ScaI | AGTACT | 1 cut(s) | 1273 |
| SchI | GAGTC | 1 cut(s) | 794 |
| ScrFI | CCNGG | 3 cut(s) | 332, 991, 1120 |
| SduI | GDGCHC | 4 cut(s) | 68, 123, 628, 969 |
| SfaNI | GCATC | 3 cut(s) | 589, 709, 1693 |
| SfcI | CTRYAG | 1 cut(s) | 385 |
| SfuI | TTCGAA | 1 cut(s) | 353 |
| SinI | GGWCC | 1 cut(s) | 57 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1160, 1421, 1479 |
| SmlI | CTYRAG | 2 cut(s) | 841, 1622 |
| SmoI | CTYRAG | 2 cut(s) | 841, 1622 |
| SpeI | ACTAGT | 1 cut(s) | 37 |
| Sse9I | AATT | 3 cut(s) | 51, 872, 1633 |
| SseBI | AGGCCT | 1 cut(s) | 348 |
| SspMI | CTAG | 2 cut(s) | 38, 1688 |
| SstI | GAGCTC | 1 cut(s) | 628 |
| StuI | AGGCCT | 1 cut(s) | 348 |
| StyD4I | CCNGG | 3 cut(s) | 330, 989, 1118 |
| StyI | CCWWGG | 7 cut(s) | 174, 255, 270, 343, 648, 702, 960 |
| TaaI | ACNGT | 5 cut(s) | 679, 712, 745, 928, 1276 |
| TaqI | TCGA | 5 cut(s) | 245, 325, 353, 359, 1033 |
| TaqII | GACCGA | 1 cut(s) | 1031 |
| TasI | AATT | 3 cut(s) | 51, 872, 1633 |
| TatI | WGTACW | 1 cut(s) | 1271 |
| TauI | GCSGC | 6 cut(s) | 207, 210, 305, 308, 1262, 1510 |
| TfiI | GAWTC | 1 cut(s) | 1030 |
| Tru1I | TTAA | 6 cut(s) | 842, 897, 984, 1041, 1073, 1667 |
| Tru9I | TTAA | 6 cut(s) | 842, 897, 984, 1041, 1073, 1667 |
| TscAI | CASTG | 2 cut(s) | 933, 1150 |
| TseFI | GTSAC | 3 cut(s) | 28, 259, 1012 |
| TseI | GCWGC | 4 cut(s) | 656, 938, 971, 1722 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 259, 1012 |
| TspDTI | ATGAA | 5 cut(s) | 17, 384, 504, 570, 818 |
| TspRI | CASTG | 2 cut(s) | 933, 1150 |
| Vha464I | CTTAAG | 1 cut(s) | 841 |
| VpaK11BI | GGWCC | 1 cut(s) | 57 |
| VspI | ATTAAT | 1 cut(s) | 1667 |
| XapI | RAATTY | 2 cut(s) | 51, 1633 |
| XceI | RCATGY | 3 cut(s) | 896, 1159, 1478 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 787, 925, 958 |
| XmiI | GTMKAC | 1 cut(s) | 1692 |
| XspI | CTAG | 2 cut(s) | 38, 1688 |
| ZrmI | AGTACT | 1 cut(s) | 1273 |
| Zsp2I | ATGCAT | 1 cut(s) | 604 |