Rh7BG380100

Domain of unknown function (DUF4149)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0010354
Physical Location & Seq
Reverse (-)
40997797 .. 41000784
2988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG380100.1

Sequence Viewer

Length: 1734 bp
ATGATGAATGTTGTCGCTTTGTTCCTCGTTGTGACTTCACTAGTCAGCGCGGGAATTTGGTCTCCGAGCCCAGATCAACAGAACCAAAAGAAGCAAGGAGAGGAAGTCATAGTGAAAAACGGGCACAGAGTGGTTGTTGTTGAGTACGAGGACCAACAAGGCCACAACCCCAACACCAAGGTCTCCATCTCGGCGGATCAAGATGGCCGCCGCAAATCCAGCTCCGCTATTTCCAACAATGACATTTCGACGCCCTCCAAGGTGACGAGGGCCTTGGACAATGCTATGGAGAACATCAAAGAAGCCGCCGCGTCGGTTCTTCCAAATCGAGGCCAGGGACAAGGCCAAGGCCTTTCGAAATCGAAAACTGATGAAGATGGCCACCACTATAGTAGCCCGAAAGAGCTGATATGCGACGCGTATGGGAAATGCAAGCACAAGATTGCCAATGCTTTGGAGACCAAGAAAGATATTTTGAAGGAGACTGCACATGAAGCCAAAGAGACAGCACACAAGGTCATAGAGATCAAGAAGGATATTGACAAGGGGATTGCACATGAAGTCAAGGAGACGGCTCAGAAGGTCGGAGAGGCGGTGGAAGATGCATACGACGCCGTTTCCGAGAGAGCTCATCAGGAGGTTGGAGAGCGTGCCAAGGAGGCTGCACACAAGGCCAAAGATACAGTAGGAGGTGCATATGGAAGAGCCAAGGATACAGTAGAAGATGCCTATGAGAGAGCCAAAGGGACGATTTCGGATACAACACATGAGGTTGAAGAACGAGCCAAAGAGTCGGTGGACAAAGCAATGAACACAGCCAAGACAGCAAAGGAAATGGGAAAGACCTTAAGTGGAGACGTACAAAGAAATGTGTCCAAATTGAAAACAGCTCCGGAACATGTTAAAGAGAAAGCAAAAGAGGCCAAAGAGACAGTGGAGGATGCATCAGAAAGAGCCAAAGAGACCATGGAGCACGCTGCTTATAAGGTTAAGGCCGGGGCAGAGGATATAAAGGATGTGACCGATAGGAGGTTGAATCGAGTGTTTAAGAAAGGAAGAGATATCTTGTATGGTGTGTTAAGGTCTATGGGGTCATTGTTTCCAGCGGTTGATCCTTTGTTATCCGGGCTGAGTTTGTTTGGGTTTGCCACTGCTTATGGCATGTCTATGTGGATAACATTTGCTTCAAGCTATTTGTTGTCTCGGGTGCTTTCCCCGCACCAGTTTGGGATGGTGCAGAGCAAGATTTACAAGGTTTATTTCGCGGCAATGGCCAGTACTGTTGGGATGGCATTGTTGGGCCATCTATTGAACCATTGGAAGAAGTTGACAGGGAGGAATGTTGACGCCTTACAGAACTACAATCTTTTGCTTGCCGAGTTAATGGTTCTGTTCAATATGTTACACTTGGAGCCAAGATCCACTAAGGTGATGTTTGAGAAACTGAAGTTGGAGAAAGAAGAAGGAAGAGGGAGAGAGCATGTTGGTGCCGAAACCAGCACCGAGGCTGAGCGACATTCACTTACTGCCGAACCCTCAACAACAACTCCCTCAGAAGTCCCAGAAGGGAGGGAGTGTGAGGTAGTTCAGCCTCAGGTTGACAGACTTAACGAGGCACATCAGAGGCTCAAGAAGCTGAATTCCTACTCATCTATCCTCAACATCTTGTCACTAATGGCTCTTACTTGGCATCTAGTATACCTTGCTAAGCGACTGCAAAGTTCTTGCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4149

Protein Analysis

577

Amino Acids

63.8

Weight (kDa)

8.04

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4149 PF13664 381 - 481 2.1e-20 Domain of unknown function (DUF4149)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010354)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22600 AT1G72100
fragaria_vesca FvH4_5g31970
malus_domestica MD15G1396400.v1.1 MD15G1407700.v1.1
prunus_persica Prupe.1G554000_v2.0.a1
pyrus_communis pycom15g36370
rosa_chinensis RchiOBHm_Chr7g0227991
rosa_laevigata RLG00000001601
rosa_multiflora Rmu_co8508245.1_g000001 Rmu_sc0006493.1_g000005
rosa_roxburghii Rroxscaffold_3G00231680
rosa_rugosa Rorug07G0244900
rosa_samantha Rh7AG398000 Rh7AG398300 Rh7AG398800 Rh7BG380100 Rh7CG416400 Rh7CG416900 Rh7DG394400
rosa_wichuraiana Rw7G033150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 984
AccB1I GGYRCC 1 cut(s) 1487
AccI GTMKAC 1 cut(s) 1698
AccII CGCG 4 cut(s) 50, 311, 419, 1265
AccIII TCCGGA 1 cut(s) 892
AclWI GGATC 3 cut(s) 204, 1106, 1413
AcoI YGGCCR 3 cut(s) 205, 379, 1272
AcsI RAATTY 2 cut(s) 54, 1639
AcuI CTGAAG 1 cut(s) 1466
AcyI GRCGYC 3 cut(s) 251, 612, 1347
AdeI CACNNNGTG 1 cut(s) 130
AfaI GTAC 3 cut(s) 146, 861, 1279
AfiI CCNNNNNNNGG 2 cut(s) 329, 1029
AflII CTTAAG 1 cut(s) 847
AflIII ACRYGT 2 cut(s) 417, 898
AgsI TTSAA 7 cut(s) 478, 776, 883, 1036, 1188, 1312, 1396
AhlI ACTAGT 1 cut(s) 40
AjnI CCWGG 1 cut(s) 333
AjuI GAANNNNNNNTTGG 2 cut(s) 1433, 1465
AleI CACNNNNGTG 1 cut(s) 1427
AluBI AGCT 6 cut(s) 222, 406, 629, 890, 1191, 1636
AluI AGCT 6 cut(s) 222, 406, 629, 890, 1191, 1636
Alw21I GWGCWC 2 cut(s) 631, 975
AlwI GGATC 3 cut(s) 204, 1106, 1413
Ama87I CYCGRG 1 cut(s) 1203
Aor13HI TCCGGA 1 cut(s) 892
ApeKI GCWGC 3 cut(s) 662, 977, 1728
ApoI RAATTY 2 cut(s) 54, 1639
AspLEI GCGC 1 cut(s) 50
AspS9I GGNCC 3 cut(s) 151, 270, 1300
AsuC2I CCSGG 2 cut(s) 997, 1126
AsuHPI GGTGA 2 cut(s) 274, 1441
AsuII TTCGAA 1 cut(s) 356
AvaI CYCGRG 1 cut(s) 1203
AvaII GGWCC 1 cut(s) 151
AxyI CCTNAGG 1 cut(s) 1593
BaeGI GKGCMC 1 cut(s) 126
BalI TGGCCA 2 cut(s) 381, 1274
BanI GGYRCC 1 cut(s) 1487
BanII GRGCYC 2 cut(s) 71, 631
Bbv12I GWGCWC 2 cut(s) 631, 975
BbvI GCAGC 3 cut(s) 649, 964, 1715
BccI CCATC 6 cut(s) 194, 197, 371, 1225, 1282, 1311
BceAI ACGGC 2 cut(s) 588, 599
BciT130I CCWGG 1 cut(s) 335
BciVI GTATCC 2 cut(s) 706, 751
BcnI CCSGG 2 cut(s) 997, 1126
BcuI ACTAGT 1 cut(s) 40
BfaI CTAG 2 cut(s) 41, 1694
BfmI CTRYAG 1 cut(s) 388
BfrI CTTAAG 1 cut(s) 847
BfuI GTATCC 2 cut(s) 706, 751
BglI GCCNNNNNGGC 1 cut(s) 659
BisI GCNGC 8 cut(s) 208, 211, 306, 309, 663, 978, 1266, 1729
BlpI GCTNAGC 2 cut(s) 1509, 1707
BlsI GCNGC 8 cut(s) 209, 212, 307, 310, 664, 979, 1267, 1730
BmcAI AGTACT 1 cut(s) 1279
Bme1390I CCNGG 3 cut(s) 335, 997, 1126
Bme18I GGWCC 1 cut(s) 151
BmeT110I CYCGRG 1 cut(s) 1203
BmgT120I GGNCC 3 cut(s) 151, 270, 1300
BmiI GGNNCC 2 cut(s) 1413, 1489
BmrFI CCNGG 3 cut(s) 335, 997, 1126
BmsI GCATC 5 cut(s) 592, 715, 931, 953, 1699
Bpu1102I GCTNAGC 2 cut(s) 1509, 1707
Bpu14I TTCGAA 1 cut(s) 356
BpuEI CTTGAG 1 cut(s) 1613
BpuMI CCSGG 2 cut(s) 997, 1126
BsaHI GRCGYC 3 cut(s) 251, 612, 1347
BsaI GGTCTC 4 cut(s) 66, 187, 452, 956
BsaWI WCCGGW 1 cut(s) 892
BsaXI ACNNNNNCTCC 8 cut(s) 90, 120, 579, 609, 1531, 1561, 1561, 1591
Bsc4I CCNNNNNNNGG 2 cut(s) 329, 1029
Bse1I ACTGG 2 cut(s) 1222, 1275
Bse21I CCTNAGG 1 cut(s) 1593
Bse3DI GCAATG 2 cut(s) 813, 1275
BseAI TCCGGA 1 cut(s) 892
BseBI CCWGG 1 cut(s) 335
BseGI GGATG 4 cut(s) 946, 1021, 1236, 1293
BseLI CCNNNNNNNGG 2 cut(s) 329, 1029
BseMI GCAATG 2 cut(s) 813, 1275
BseMII CTCAG 5 cut(s) 590, 1121, 1500, 1566, 1607
BseNI ACTGG 2 cut(s) 1222, 1275
BseSI GKGCMC 1 cut(s) 126
BseXI GCAGC 3 cut(s) 649, 964, 1715
BsgI GTGCAG 3 cut(s) 471, 648, 1256
Bsh1236I CGCG 4 cut(s) 50, 311, 419, 1265
BshNI GGYRCC 1 cut(s) 1487
BsiHKAI GWGCWC 2 cut(s) 631, 975
BsiHKCI CYCGRG 1 cut(s) 1203
BsiSI CCGG 3 cut(s) 893, 996, 1125
BslFI GGGAC 3 cut(s) 351, 760, 1544
BslI CCNNNNNNNGG 2 cut(s) 329, 1029
BsmBI CGTCTC 2 cut(s) 563, 849
BsmFI GGGAC 3 cut(s) 351, 760, 1544
Bso31I GGTCTC 4 cut(s) 66, 187, 452, 956
BsoBI CYCGRG 1 cut(s) 1203
Bsp119I TTCGAA 1 cut(s) 356
Bsp1286I GDGCHC 4 cut(s) 71, 126, 631, 975
Bsp13I TCCGGA 1 cut(s) 892
Bsp143I GATC 5 cut(s) 73, 196, 525, 1111, 1418
Bsp1720I GCTNAGC 2 cut(s) 1509, 1707
Bsp19I CCATGG 1 cut(s) 966
BspCNI CTCAG 5 cut(s) 589, 1122, 1501, 1565, 1606
BspEI TCCGGA 1 cut(s) 892
BspFNI CGCG 4 cut(s) 50, 311, 419, 1265
BspLI GGNNCC 2 cut(s) 1413, 1489
BspPI GGATC 3 cut(s) 204, 1106, 1413
BspQI GCTCTTC 1 cut(s) 697
BspT104I TTCGAA 1 cut(s) 356
BspT107I GGYRCC 1 cut(s) 1487
BspTI CTTAAG 1 cut(s) 847
BspTNI GGTCTC 4 cut(s) 66, 187, 452, 956
BsrDI GCAATG 2 cut(s) 813, 1275
BsrI ACTGG 2 cut(s) 1222, 1275
BssMI GATC 5 cut(s) 73, 196, 525, 1111, 1418
BssNAI GTATAC 1 cut(s) 1699
BssNI GRCGYC 3 cut(s) 251, 612, 1347
BssT1I CCWWGG 7 cut(s) 177, 258, 273, 346, 654, 708, 966
Bst1107I GTATAC 1 cut(s) 1699
Bst2UI CCWGG 1 cut(s) 335
Bst4CI ACNGT 4 cut(s) 685, 718, 934, 1282
Bst6I CTCTTC 3 cut(s) 697, 1051, 1462
BstACI GRCGYC 3 cut(s) 251, 612, 1347
BstAFI CTTAAG 1 cut(s) 847
BstBI TTCGAA 1 cut(s) 356
BstC8I GCNNGC 4 cut(s) 434, 651, 975, 1374
BstDEI CTNAG 7 cut(s) 576, 1130, 1425, 1509, 1552, 1593, 1707
BstDSI CCRYGG 1 cut(s) 966
BstF5I GGATG 4 cut(s) 946, 1021, 1236, 1293
BstFNI CGCG 4 cut(s) 50, 311, 419, 1265
BstHHI GCGC 1 cut(s) 50
BstKTI GATC 5 cut(s) 76, 199, 528, 1114, 1421
BstMBI GATC 5 cut(s) 73, 196, 525, 1111, 1418
BstNI CCWGG 1 cut(s) 335
BstNSI RCATGY 3 cut(s) 902, 1165, 1484
BstSCI CCNGG 3 cut(s) 333, 995, 1124
BstSFI CTRYAG 1 cut(s) 388
BstSLI GKGCMC 1 cut(s) 126
BstUI CGCG 4 cut(s) 50, 311, 419, 1265
BstV1I GCAGC 3 cut(s) 649, 964, 1715
BstX2I RGATCY 1 cut(s) 1418
BstXI CCANNNNNNTGG 1 cut(s) 454
BstYI RGATCY 1 cut(s) 1418
BstZ17I GTATAC 1 cut(s) 1699
Bsu36I CCTNAGG 1 cut(s) 1593
BsuI GTATCC 2 cut(s) 706, 751
BtgI CCRYGG 1 cut(s) 966
BtsCI GGATG 4 cut(s) 946, 1021, 1236, 1293
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 2 cut(s) 939, 1149
Cac8I GCNNGC 4 cut(s) 434, 651, 975, 1374
CfoI GCGC 1 cut(s) 50
Cfr13I GGNCC 3 cut(s) 151, 270, 1300
CseI GACGC 5 cut(s) 259, 300, 425, 620, 1355
Csp6I GTAC 3 cut(s) 145, 860, 1278
CviAII CATG 7 cut(s) 491, 557, 767, 899, 967, 1162, 1481
CviQI GTAC 3 cut(s) 145, 860, 1278
DdeI CTNAG 7 cut(s) 576, 1130, 1425, 1509, 1552, 1593, 1707
DpnI GATC 5 cut(s) 75, 198, 527, 1113, 1420
DpnII GATC 5 cut(s) 73, 196, 525, 1111, 1418
DraIII CACNNNGTG 1 cut(s) 130
EaeI YGGCCR 3 cut(s) 205, 379, 1272
Eam1104I CTCTTC 3 cut(s) 697, 1051, 1462
EarI CTCTTC 3 cut(s) 697, 1051, 1462
EciI GGCGGA 1 cut(s) 209
Ecl136II GAGCTC 1 cut(s) 629
Eco130I CCWWGG 7 cut(s) 177, 258, 273, 346, 654, 708, 966
Eco147I AGGCCT 1 cut(s) 351
Eco24I GRGCYC 2 cut(s) 71, 631
Eco31I GGTCTC 4 cut(s) 66, 187, 452, 956
Eco32I GATATC 1 cut(s) 1063
Eco47I GGWCC 1 cut(s) 151
Eco53kI GAGCTC 1 cut(s) 629
Eco57I CTGAAG 1 cut(s) 1466
Eco81I CCTNAGG 1 cut(s) 1593
Eco88I CYCGRG 1 cut(s) 1203
EcoICRI GAGCTC 1 cut(s) 629
EcoO109I RGGNCCY 1 cut(s) 270
EcoRI GAATTC 1 cut(s) 1639
EcoRII CCWGG 1 cut(s) 333
EcoRV GATATC 1 cut(s) 1063
EcoT14I CCWWGG 7 cut(s) 177, 258, 273, 346, 654, 708, 966
EcoT22I ATGCAT 2 cut(s) 607, 946
EcoT38I GRGCYC 2 cut(s) 71, 631
ErhI CCWWGG 7 cut(s) 177, 258, 273, 346, 654, 708, 966
Esp3I CGTCTC 2 cut(s) 563, 849
FaeI CATG 7 cut(s) 494, 560, 770, 902, 970, 1165, 1484
FaqI GGGAC 3 cut(s) 351, 760, 1544
FatI CATG 7 cut(s) 490, 556, 766, 898, 966, 1161, 1480
FauI CCCGC 2 cut(s) 43, 1224
FauNDI CATATG 1 cut(s) 697
FblI GTMKAC 1 cut(s) 1698
Fnu4HI GCNGC 8 cut(s) 208, 211, 306, 309, 663, 978, 1266, 1729
FokI GGATG 4 cut(s) 953, 1028, 1243, 1300
FriOI GRGCYC 2 cut(s) 71, 631
Fsp4HI GCNGC 8 cut(s) 208, 211, 306, 309, 663, 978, 1266, 1729
FspBI CTAG 2 cut(s) 41, 1694
GlaI GCGC 1 cut(s) 49
GluI GCNGC 8 cut(s) 208, 211, 306, 309, 663, 978, 1266, 1729
HapII CCGG 3 cut(s) 893, 996, 1125
HgaI GACGC 5 cut(s) 259, 300, 425, 620, 1355
HhaI GCGC 1 cut(s) 50
Hin1I GRCGYC 3 cut(s) 251, 612, 1347
Hin1II CATG 7 cut(s) 494, 560, 770, 902, 970, 1165, 1484
Hin6I GCGC 1 cut(s) 48
HinP1I GCGC 1 cut(s) 48
HincII GTYRAC 3 cut(s) 1329, 1345, 1600
HindII GTYRAC 3 cut(s) 1329, 1345, 1600
HinfI GANTC 2 cut(s) 791, 1036
HpaII CCGG 3 cut(s) 893, 996, 1125
HphI GGTGA 2 cut(s) 274, 1441
Hpy166II GTNNAC 5 cut(s) 799, 1329, 1345, 1600, 1699
Hpy188I TCNGA 8 cut(s) 66, 579, 587, 622, 757, 949, 1555, 1623
Hpy188III TCNNGA 5 cut(s) 200, 529, 635, 893, 1630
Hpy8I GTNNAC 5 cut(s) 799, 1329, 1345, 1600, 1699
Hpy99I CGWCG 4 cut(s) 253, 316, 419, 614
HpyAV CCTTC 5 cut(s) 472, 526, 574, 1457, 1559
HpyCH4III ACNGT 4 cut(s) 685, 718, 934, 1282
HpyCH4IV ACGT 1 cut(s) 858
HpyCH4V TGCA 9 cut(s) 432, 488, 554, 605, 665, 695, 944, 1237, 1717
HpyF3I CTNAG 7 cut(s) 576, 1130, 1425, 1509, 1552, 1593, 1707
HpySE526I ACGT 1 cut(s) 858
Hsp92I GRCGYC 3 cut(s) 251, 612, 1347
Hsp92II CATG 7 cut(s) 494, 560, 770, 902, 970, 1165, 1484
HspAI GCGC 1 cut(s) 48
Kpn2I TCCGGA 1 cut(s) 892
Kzo9I GATC 5 cut(s) 73, 196, 525, 1111, 1418
LguI GCTCTTC 1 cut(s) 697
LmnI GCTCC 4 cut(s) 227, 895, 970, 1411
Lsp1109I GCAGC 3 cut(s) 649, 964, 1715
LweI GCATC 5 cut(s) 592, 715, 931, 953, 1699
MaeI CTAG 2 cut(s) 41, 1694
MaeII ACGT 1 cut(s) 858
MaeIII GTNAC 5 cut(s) 31, 262, 1018, 1401, 1668
MalI GATC 5 cut(s) 75, 198, 527, 1113, 1420
MboI GATC 5 cut(s) 73, 196, 525, 1111, 1418
MflI RGATCY 1 cut(s) 1418
MhlI GDGCHC 4 cut(s) 71, 126, 631, 975
MlsI TGGCCA 2 cut(s) 381, 1274
MluCI AATT 3 cut(s) 54, 878, 1639
MluI ACGCGT 1 cut(s) 417
MluNI TGGCCA 2 cut(s) 381, 1274
MlyI GAGTC 1 cut(s) 800
MmeI TCCRAC 4 cut(s) 258, 565, 622, 1431
Mox20I TGGCCA 2 cut(s) 381, 1274
Mph1103I ATGCAT 2 cut(s) 607, 946
MroI TCCGGA 1 cut(s) 892
MscI TGGCCA 2 cut(s) 381, 1274
MseI TTAA 7 cut(s) 848, 903, 990, 1047, 1079, 1382, 1608
MslI CAYNNNNRTG 3 cut(s) 1166, 1427, 1485
Msp20I TGGCCA 2 cut(s) 381, 1274
MspA1I CMGCKG 1 cut(s) 1106
MspCI CTTAAG 1 cut(s) 847
MspI CCGG 3 cut(s) 893, 996, 1125
MspR9I CCNGG 3 cut(s) 335, 997, 1126
MvaI CCWGG 1 cut(s) 335
MvnI CGCG 4 cut(s) 50, 311, 419, 1265
NciI CCSGG 2 cut(s) 997, 1126
NcoI CCATGG 1 cut(s) 966
NdeI CATATG 1 cut(s) 697
NdeII GATC 5 cut(s) 73, 196, 525, 1111, 1418
NlaIII CATG 7 cut(s) 494, 560, 770, 902, 970, 1165, 1484
NlaIV GGNNCC 2 cut(s) 1413, 1489
NmeAIII GCCGAG 2 cut(s) 170, 1402
NmuCI GTSAC 4 cut(s) 31, 262, 1018, 1668
NsiI ATGCAT 2 cut(s) 607, 946
NspI RCATGY 3 cut(s) 902, 1165, 1484
NspV TTCGAA 1 cut(s) 356
OliI CACNNNNGTG 1 cut(s) 1427
PceI AGGCCT 1 cut(s) 351
PciI ACATGT 1 cut(s) 898
PciSI GCTCTTC 1 cut(s) 697
PcsI WCGNNNNNNNCGW 1 cut(s) 618
PfeI GAWTC 1 cut(s) 1036
PkrI GCNGC 8 cut(s) 209, 212, 307, 310, 664, 979, 1267, 1730
PleI GAGTC 1 cut(s) 799
PpsI GAGTC 1 cut(s) 799
PscI ACATGT 1 cut(s) 898
PsiI TTATAA 1 cut(s) 984
Psp124BI GAGCTC 1 cut(s) 631
Psp6I CCWGG 1 cut(s) 333
PspGI CCWGG 1 cut(s) 333
PspN4I GGNNCC 2 cut(s) 1413, 1489
PspPI GGNCC 3 cut(s) 151, 270, 1300
PsuI RGATCY 1 cut(s) 1418
RsaI GTAC 3 cut(s) 146, 861, 1279
RsaNI GTAC 3 cut(s) 145, 860, 1278
RseI CAYNNNNRTG 3 cut(s) 1166, 1427, 1485
SacI GAGCTC 1 cut(s) 631
SapI GCTCTTC 1 cut(s) 697
SaqAI TTAA 7 cut(s) 848, 903, 990, 1047, 1079, 1382, 1608
SatI GCNGC 8 cut(s) 208, 211, 306, 309, 663, 978, 1266, 1729
Sau3AI GATC 5 cut(s) 73, 196, 525, 1111, 1418
Sau96I GGNCC 3 cut(s) 151, 270, 1300
ScaI AGTACT 1 cut(s) 1279
SchI GAGTC 1 cut(s) 800
ScrFI CCNGG 3 cut(s) 335, 997, 1126
SduI GDGCHC 4 cut(s) 71, 126, 631, 975
SfaNI GCATC 5 cut(s) 592, 715, 931, 953, 1699
SfcI CTRYAG 1 cut(s) 388
SfuI TTCGAA 1 cut(s) 356
SinI GGWCC 1 cut(s) 151
SmiMI CAYNNNNRTG 3 cut(s) 1166, 1427, 1485
SmlI CTYRAG 2 cut(s) 847, 1628
SmoI CTYRAG 2 cut(s) 847, 1628
SpeI ACTAGT 1 cut(s) 40
Sse9I AATT 3 cut(s) 54, 878, 1639
SseBI AGGCCT 1 cut(s) 351
SspMI CTAG 2 cut(s) 41, 1694
SstI GAGCTC 1 cut(s) 631
StuI AGGCCT 1 cut(s) 351
StyD4I CCNGG 3 cut(s) 333, 995, 1124
StyI CCWWGG 7 cut(s) 177, 258, 273, 346, 654, 708, 966
TaaI ACNGT 4 cut(s) 685, 718, 934, 1282
TaiI ACGT 1 cut(s) 861
TaqI TCGA 5 cut(s) 248, 328, 356, 362, 1039
TaqII GACCGA 1 cut(s) 1037
TasI AATT 3 cut(s) 54, 878, 1639
TatI WGTACW 1 cut(s) 1277
TauI GCSGC 5 cut(s) 210, 213, 308, 311, 1268
TfiI GAWTC 1 cut(s) 1036
Tru1I TTAA 7 cut(s) 848, 903, 990, 1047, 1079, 1382, 1608
Tru9I TTAA 7 cut(s) 848, 903, 990, 1047, 1079, 1382, 1608
TscAI CASTG 2 cut(s) 939, 1156
TseFI GTSAC 4 cut(s) 31, 262, 1018, 1668
TseI GCWGC 3 cut(s) 662, 977, 1728
Tsp45I GTSAC 4 cut(s) 31, 262, 1018, 1668
TspDTI ATGAA 5 cut(s) 20, 387, 507, 573, 824
TspRI CASTG 2 cut(s) 939, 1156
Vha464I CTTAAG 1 cut(s) 847
VpaK11BI GGWCC 1 cut(s) 151
XapI RAATTY 2 cut(s) 54, 1639
XceI RCATGY 3 cut(s) 902, 1165, 1484
XcmI CCANNNNNNNNNTGG 3 cut(s) 793, 931, 964
XmiI GTMKAC 1 cut(s) 1698
XspI CTAG 2 cut(s) 41, 1694
ZrmI AGTACT 1 cut(s) 1279
Zsp2I ATGCAT 2 cut(s) 607, 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.