Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002330

Physical Location & Seq

Genomic Coordinates Forward (+)

42456771 .. 42461888

Gene Structure 5118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002971

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGTTGTTCAGAAACATGACTTGTACAATATGGCCTGTTGCTACAGAATACGGCTATGCAAATTTGTGTCCATGGAACAATTTCTCCATTCCCGGATCTCAAGAAAATACTTACAGGGTTAAGGTCTTGGATGATGACCACAAAATAGTGGTCAATTTGAAGGGGAAAACTGCGACAAAAACTGCATCAGTTCGAGTCGGAGCTAGCCGCAAAGTGTTGTCTCAACAGTCCAGCTCACCTTCATCATATAACAAACTTGGCAAGCGTAAACGATCAGATGAATGCAAAACCAAGTGTAGATCAAACTTCAGAAGCTCTGTGCTTAAAAACTACAGAAATTTCAGCAAAAGTGGGCTTCCTCAGCGATTTCTATACTATGAATCTGGGGACTGGATAGACTATCCTCAAGAAATTGTTGACTTGGTTAGGGAGCACTTTCAACTGAAAAATGCAGCTATAGAAGTGGATTTGAATGGCTGTCGTTTGTTGCTAGATATTCTGTATATGATACAGTTGGAAGTGAAAACAGGTCTAGTGAAGCAAATTGCTTGGATTGATGAAGCAGGTTGCTGCTTCTTTCCAGAAATTCATTCCTGTTTTTTAGAAAATGAAAAGTACTGCCATTCTGAATTACAGCAGAGTGATTTTCCTGTTGTGCTGAAAGAGGCAAATGGGCCCCAGGATATCACATTGAAGCTTGAGATTGGAATAACTGGATTGAATAGCTCCAATACAGAGGAATGTGTTGAGGAGTCAAATAGTCCTGCTAAGAGGACTAAGATTGAACAAACCCCTCTTGGTAATCGAGACTATATGAAAGTAAATGACTATTGCAACCAAGTATCAGATGCCAAAATGCAGAAAATCAATAAGGGAACTCTACAGTTTGATGAAAATATAATGACTGAGTCTCCAGTTTTCGTTGAAACACTGGATTCTAATTCAGTACGAGACCTGTTTGATAAGGGCATTGGTTCCTCTTTGAATGCATGTATAGTAGAGATTAAGCACTGCTCTAGTCATTTGATGCAAGCAAGAGCTGAGCTGTTCCAAAAGCAAGTTGAACTAACAAAGAAGTACCGCGGGAATCCAAATGTCCAGTATGGTTGGATGGCTGTTACTAAAGATGCACTATCTAAAATCATGATGTATGGGCTTGGGCATGGCGGACCTACGAGTATGTACTCAAATGGCACTGGAGTTAACTTGACATCTATTAATCACGCTCATATCAGTGCAAGTTACAGTGATGATGACGAAAATGGGATAAGATACATAATGTTATGCCGTGTTATTATGGGAAACGTCGAAATGGTCAATCCCGGATCTGGACAGTGCCATCCCAGTTCTATACAATTTGATAGTGGAGTTGATGACCTTCAAAATCCACGCCATCTTATAGTTTGGAGTATGAACATGAATACCCATATTTTTCCGGAGTATGTTGTCAGTTTCAAGACATCTTTGAAGGCTGAAGGGACCATGGTTACAGAAAGCAGAGGTCATCTTTCTGGAATTACAACTAGTGATGAGTATCCAGGCCACTTGCAGTTCAACGGCTCGCCAATGGAACCAGGGAGGCATCCTAGGCCAGCTTTAGAATATGAGAAATCACAGGAAAAGCCTGTTGAAATTGGCTCAAGCTCTTTGACAACTCCAAAATCCCCATGGATGCCATTTAAAGCGCTATTTGAAGCTATTTCAAAAGAAGTTGCTCCGAAAGATATGAAATTGGTTAATGTTCACTATGATCTATTCAGGTGCAAGAAGATCAGCCGGGATGGTTTTATTCAGAAGTTAAGAGCAATTGTTGGAGATGCCTTGCTGAGGTCAACCATAATGAGCCTTCAGTGCAAGCTACCACCAAGAACTGCGTGCCCTATGAAACTGCCAAAGCAGGAAGAAGAATTTGATGCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARP RST

Protein Analysis

641

Amino Acids

72.11

Weight (kDa)

7.5

Isoelectric Point (pI)

48.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WWE_5	PF23467	114 - 193	4e-33	WWE domain
RST	PF12174	553 - 617	7.6e-27	RCD1-SRO-TAF4 (RST) plant domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002330)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT2G35510 AT2G35510 AT2G35510
fragaria_vesca	FvH4_5g23020 FvH4_5g23040
malus_domestica	MD02G1259200.v1.1 MD07G1061500.v1.1
prunus_persica	Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1
pyrus_communis	pycom02g22060
rosa_chinensis	RchiOBHm_Chr1g0331751 RchiOBHm_Chr7g0211751
rosa_laevigata	RLG00000002971 RLG00000029717
rosa_multiflora	Rmu_sc0001875.1_g000022 Rmu_ssc0000089.1_g000021
rosa_roxburghii	Rroxscaffold_3G00247470 Rroxscaffold_4G00318810
rosa_rugosa	Rorug01G0096000 Rorug01G0096100 Rorug07G0128300
rosa_samantha	Rh1AG120100 Rh1BG091700 Rh1CG115100 Rh1DG125400 Rh7AG261000 Rh7BG254500 Rh7CG277500 Rh7DG267600
rosa_wichuraiana	Rw1G009710 Rw7G022240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	554
AccII	CGCG	1 cut(s)	1083
AccIII	TCCGGA	1 cut(s)	1435
AciI	CCGC	4 cut(s)	208, 1081, 1083, 1167
AclWI	GGATC	2 cut(s)	103, 1333
AcsI	RAATTY	4 cut(s)	61, 337, 585, 1907
AcuI	CTGAAG	3 cut(s)	292, 1494, 1832
AfaI	GTAC	5 cut(s)	25, 617, 948, 1079, 1184
AfeI	AGCGCT	1 cut(s)	1686
AfiI	CCNNNNNNNGG	2 cut(s)	1328, 1827
AhlI	ACTAGT	1 cut(s)	1523
AjnI	CCWGG	3 cut(s)	678, 1537, 1573
AloI	GAACNNNNNNTCC	2 cut(s)	68, 100
Alw21I	GWGCWC	1 cut(s)	435
Alw26I	GTCTC	4 cut(s)	225, 801, 915, 945
AlwI	GGATC	2 cut(s)	103, 1333
Aor13HI	TCCGGA	1 cut(s)	1435
Aor51HI	AGCGCT	1 cut(s)	1686
AoxI	GGCC	4 cut(s)	32, 674, 1540, 1589
ApaI	GGGCCC	1 cut(s)	678
ApeKI	GCWGC	3 cut(s)	452, 570, 1916
ApoI	RAATTY	4 cut(s)	61, 337, 585, 1907
ArsI	GACNNNNNNTTYG	2 cut(s)	135, 167
AseI	ATTAAT	1 cut(s)	1218
Asp700I	GAANNNNTTC	1 cut(s)	80
AspA2I	CCTAGG	1 cut(s)	1586
AspLEI	GCGC	1 cut(s)	1687
AspS9I	GGNCC	4 cut(s)	674, 675, 1169, 1479
AsuC2I	CCSGG	3 cut(s)	93, 1323, 1778
AsuHPI	GGTGA	1 cut(s)	228
AsuNHI	GCTAGC	1 cut(s)	203
AvaII	GGWCC	2 cut(s)	1169, 1479
AvrII	CCTAGG	1 cut(s)	1586
BaeGI	GKGCMC	2 cut(s)	678, 1880
BanII	GRGCYC	1 cut(s)	678
Bbv12I	GWGCWC	1 cut(s)	435
BbvCI	CCTCAGC	2 cut(s)	360, 1826
BbvI	GCAGC	3 cut(s)	464, 557, 1903
BccI	CCATC	4 cut(s)	1105, 1347, 1401, 1775
BceAI	ACGGC	3 cut(s)	67, 1272, 1573
BciT130I	CCWGG	3 cut(s)	680, 1539, 1575
BciVI	GTATCC	1 cut(s)	1545
BcnI	CCSGG	3 cut(s)	93, 1323, 1778
BcoDI	GTCTC	4 cut(s)	225, 801, 915, 945
BcuI	ACTAGT	1 cut(s)	1523
BfaI	CTAG	6 cut(s)	204, 491, 533, 1017, 1524, 1587
BfmI	CTRYAG	4 cut(s)	42, 331, 456, 881
BfoI	RGCGCY	1 cut(s)	1688
BfuAI	ACCTGC	1 cut(s)	554
BfuI	GTATCC	1 cut(s)	1545
BisI	GCNGC	4 cut(s)	208, 453, 571, 1917
BlnI	CCTAGG	1 cut(s)	1586
BlpI	GCTNAGC	1 cut(s)	1041
BlsI	GCNGC	4 cut(s)	209, 454, 572, 1918
BmcAI	AGTACT	1 cut(s)	617
Bme1390I	CCNGG	6 cut(s)	93, 680, 1323, 1539, 1575, 1778
Bme18I	GGWCC	2 cut(s)	1169, 1479
BmgT120I	GGNCC	4 cut(s)	674, 675, 1169, 1479
BmiI	GGNNCC	5 cut(s)	676, 677, 976, 1480, 1572
BmrFI	CCNGG	6 cut(s)	93, 680, 1323, 1539, 1575, 1778
BmrI	ACTGGG	1 cut(s)	1338
BmsI	GCATC	8 cut(s)	194, 838, 1017, 1117, 1591, 1662, 1807, 1903
BmtI	GCTAGC	1 cut(s)	207
BmuI	ACTGGG	1 cut(s)	1338
BpmI	CTGGAG	2 cut(s)	897, 1218
Bpu10I	CCTNAGC	2 cut(s)	360, 1826
Bpu1102I	GCTNAGC	1 cut(s)	1041
BpuEI	CTTGAG	4 cut(s)	84, 390, 719, 1624
BpuMI	CCSGG	3 cut(s)	93, 1323, 1778
BsaBI	GATNNNNATC	1 cut(s)	1533
BsaI	GGTCTC	1 cut(s)	945
BsaJI	CCNNGG	7 cut(s)	71, 678, 1081, 1482, 1574, 1586, 1667
BsaWI	WCCGGW	1 cut(s)	1435
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 98, 895, 925
Bsc4I	CCNNNNNNNGG	2 cut(s)	1328, 1827
Bse1I	ACTGG	7 cut(s)	395, 718, 914, 936, 1099, 1201, 1344
Bse8I	GATNNNNATC	1 cut(s)	1533
BseAI	TCCGGA	1 cut(s)	1435
BseBI	CCWGG	3 cut(s)	680, 1539, 1575
BseDI	CCNNGG	7 cut(s)	71, 678, 1081, 1482, 1574, 1586, 1667
BseGI	GGATG	6 cut(s)	136, 1116, 1339, 1582, 1677, 1786
BseJI	GATNNNNATC	1 cut(s)	1533
BseLI	CCNNNNNNNGG	2 cut(s)	1328, 1827
BseMII	CTCAG	4 cut(s)	374, 897, 1032, 1817
BseNI	ACTGG	7 cut(s)	395, 718, 914, 936, 1099, 1201, 1344
BseRI	GAGGAG	1 cut(s)	764
BseSI	GKGCMC	2 cut(s)	678, 1880
BseXI	GCAGC	3 cut(s)	464, 557, 1903
Bsh1236I	CGCG	1 cut(s)	1083
BshFI	GGCC	4 cut(s)	34, 676, 1542, 1591
BsiHKAI	GWGCWC	1 cut(s)	435
BsiSI	CCGG	4 cut(s)	93, 1323, 1436, 1777
BslFI	GGGAC	2 cut(s)	401, 1492
BslI	CCNNNNNNNGG	2 cut(s)	1328, 1827
BsmAI	GTCTC	4 cut(s)	225, 801, 915, 945
BsmFI	GGGAC	2 cut(s)	401, 1492
BsmI	GAATGC	2 cut(s)	287, 991
BsnI	GGCC	4 cut(s)	34, 676, 1542, 1591
Bso31I	GGTCTC	1 cut(s)	945
Bsp120I	GGGCCC	1 cut(s)	674
Bsp1286I	GDGCHC	3 cut(s)	435, 678, 1880
Bsp13I	TCCGGA	1 cut(s)	1435
Bsp1407I	TGTACA	1 cut(s)	23
Bsp143I	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
Bsp1720I	GCTNAGC	1 cut(s)	1041
Bsp19I	CCATGG	3 cut(s)	71, 1482, 1667
BspACI	CCGC	4 cut(s)	208, 1081, 1083, 1167
BspANI	GGCC	4 cut(s)	34, 676, 1542, 1591
BspCNI	CTCAG	4 cut(s)	373, 898, 1033, 1818
BspEI	TCCGGA	1 cut(s)	1435
BspFNI	CGCG	1 cut(s)	1083
BspHI	TCATGA	1 cut(s)	1143
BspLI	GGNNCC	5 cut(s)	676, 677, 976, 1480, 1572
BspMI	ACCTGC	1 cut(s)	554
BspOI	GCTAGC	1 cut(s)	207
BspPI	GGATC	2 cut(s)	103, 1333
BspTNI	GGTCTC	1 cut(s)	945
BsrGI	TGTACA	1 cut(s)	23
BsrI	ACTGG	7 cut(s)	395, 718, 914, 936, 1099, 1201, 1344
BssECI	CCNNGG	7 cut(s)	71, 678, 1081, 1482, 1574, 1586, 1667
BssMI	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
BssT1I	CCWWGG	4 cut(s)	71, 1482, 1586, 1667
Bst2UI	CCWGG	3 cut(s)	680, 1539, 1575
Bst4CI	ACNGT	5 cut(s)	228, 513, 885, 1247, 1335
BstAUI	TGTACA	1 cut(s)	23
BstC8I	GCNNGC	7 cut(s)	205, 263, 1032, 1562, 1593, 1856, 1876
BstDEI	CTNAG	6 cut(s)	360, 768, 777, 906, 1041, 1826
BstDSI	CCRYGG	4 cut(s)	71, 1081, 1482, 1667
BstENI	CCTNNNNNAGG	1 cut(s)	1825
BstF5I	GGATG	6 cut(s)	136, 1116, 1339, 1582, 1677, 1786
BstFNI	CGCG	1 cut(s)	1083
BstH2I	RGCGCY	1 cut(s)	1688
BstHHI	GCGC	1 cut(s)	1687
BstKTI	GATC	6 cut(s)	98, 275, 302, 1328, 1753, 1773
BstMAI	GTCTC	4 cut(s)	225, 801, 915, 945
BstMBI	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
BstMWI	GCNNNNNNNGC	3 cut(s)	361, 1588, 1851
BstNI	CCWGG	3 cut(s)	680, 1539, 1575
BstNSI	RCATGY	1 cut(s)	993
BstSCI	CCNGG	6 cut(s)	91, 678, 1321, 1537, 1573, 1776
BstSFI	CTRYAG	4 cut(s)	42, 331, 456, 881
BstSLI	GKGCMC	2 cut(s)	678, 1880
BstUI	CGCG	1 cut(s)	1083
BstV1I	GCAGC	3 cut(s)	464, 557, 1903
BstX2I	RGATCY	2 cut(s)	95, 1325
BstYI	RGATCY	2 cut(s)	95, 1325
BsuI	GTATCC	1 cut(s)	1545
BsuRI	GGCC	4 cut(s)	34, 676, 1542, 1591
BtgI	CCRYGG	4 cut(s)	71, 1081, 1482, 1667
BtsCI	GGATG	6 cut(s)	136, 1116, 1339, 1582, 1677, 1786
BtsI	GCAGTG	1 cut(s)	1009
BtsIMutI	CAGTG	7 cut(s)	929, 1009, 1194, 1240, 1252, 1340, 1856
BveI	ACCTGC	1 cut(s)	554
Cac8I	GCNNGC	7 cut(s)	205, 263, 1032, 1562, 1593, 1856, 1876
CciI	TCATGA	1 cut(s)	1143
CfoI	GCGC	1 cut(s)	1687
Cfr13I	GGNCC	4 cut(s)	674, 675, 1169, 1479
Cfr42I	CCGCGG	1 cut(s)	1084
Csp6I	GTAC	5 cut(s)	24, 616, 947, 1078, 1183
CviAII	CATG	8 cut(s)	16, 72, 990, 1144, 1163, 1417, 1483, 1668
CviQI	GTAC	5 cut(s)	24, 616, 947, 1078, 1183
DdeI	CTNAG	6 cut(s)	360, 768, 777, 906, 1041, 1826
DpnI	GATC	6 cut(s)	97, 274, 301, 1327, 1752, 1772
DpnII	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
DraI	TTTAAA	1 cut(s)	1681
EciI	GGCGGA	1 cut(s)	1182
Eco130I	CCWWGG	4 cut(s)	71, 1482, 1586, 1667
Eco24I	GRGCYC	1 cut(s)	678
Eco31I	GGTCTC	1 cut(s)	945
Eco32I	GATATC	1 cut(s)	685
Eco47I	GGWCC	2 cut(s)	1169, 1479
Eco47III	AGCGCT	1 cut(s)	1686
Eco57I	CTGAAG	3 cut(s)	292, 1494, 1832
EcoNI	CCTNNNNNAGG	1 cut(s)	1825
EcoO109I	RGGNCCY	1 cut(s)	675
EcoRII	CCWGG	3 cut(s)	678, 1537, 1573
EcoRV	GATATC	1 cut(s)	685
EcoT14I	CCWWGG	4 cut(s)	71, 1482, 1586, 1667
EcoT22I	ATGCAT	1 cut(s)	991
EcoT38I	GRGCYC	1 cut(s)	678
ErhI	CCWWGG	4 cut(s)	71, 1482, 1586, 1667
FaeI	CATG	8 cut(s)	19, 75, 993, 1147, 1166, 1420, 1486, 1671
FaqI	GGGAC	2 cut(s)	401, 1492
FatI	CATG	8 cut(s)	15, 71, 989, 1143, 1162, 1416, 1482, 1667
FauI	CCCGC	1 cut(s)	1076
Fnu4HI	GCNGC	4 cut(s)	208, 453, 571, 1917
FokI	GGATG	6 cut(s)	143, 1123, 1326, 1569, 1684, 1793
FriOI	GRGCYC	1 cut(s)	678
Fsp4HI	GCNGC	4 cut(s)	208, 453, 571, 1917
FspBI	CTAG	6 cut(s)	204, 491, 533, 1017, 1524, 1587
GlaI	GCGC	1 cut(s)	1686
GluI	GCNGC	4 cut(s)	208, 453, 571, 1917
GsuI	CTGGAG	2 cut(s)	897, 1218
HaeII	RGCGCY	1 cut(s)	1688
HaeIII	GGCC	4 cut(s)	34, 676, 1542, 1591
HapII	CCGG	4 cut(s)	93, 1323, 1436, 1777
HhaI	GCGC	1 cut(s)	1687
Hin1II	CATG	8 cut(s)	19, 75, 993, 1147, 1166, 1420, 1486, 1671
Hin6I	GCGC	1 cut(s)	1685
HinP1I	GCGC	1 cut(s)	1685
HincII	GTYRAC	3 cut(s)	418, 1204, 1833
HindII	GTYRAC	3 cut(s)	418, 1204, 1833
HindIII	AAGCTT	1 cut(s)	695
HinfI	GANTC	6 cut(s)	195, 380, 752, 908, 935, 1087
HpaI	GTTAAC	1 cut(s)	1204
HpaII	CCGG	4 cut(s)	93, 1323, 1436, 1777
HphI	GGTGA	1 cut(s)	228
Hpy166II	GTNNAC	5 cut(s)	269, 418, 1204, 1744, 1833
Hpy188I	TCNGA	8 cut(s)	11, 200, 277, 311, 628, 847, 1719, 1794
Hpy188III	TCNNGA	9 cut(s)	101, 407, 581, 806, 1144, 1329, 1436, 1456, 1512
Hpy8I	GTNNAC	5 cut(s)	269, 418, 1204, 1744, 1833
Hpy99I	CGWCG	1 cut(s)	1310
HpyAV	CCTTC	6 cut(s)	154, 249, 1388, 1462, 1469, 1856
HpyCH4III	ACNGT	5 cut(s)	228, 513, 885, 1247, 1335
HpyCH4IV	ACGT	1 cut(s)	1305
HpyF10VI	GCNNNNNNNGC	3 cut(s)	361, 1588, 1851
HpyF3I	CTNAG	6 cut(s)	360, 768, 777, 906, 1041, 1826
HpySE526I	ACGT	1 cut(s)	1305
Hsp92II	CATG	8 cut(s)	19, 75, 993, 1147, 1166, 1420, 1486, 1671
HspAI	GCGC	1 cut(s)	1685
Kpn2I	TCCGGA	1 cut(s)	1435
KspAI	GTTAAC	1 cut(s)	1204
KspI	CCGCGG	1 cut(s)	1084
Kzo9I	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
LmnI	GCTCC	4 cut(s)	200, 430, 731, 1720
Lsp1109I	GCAGC	3 cut(s)	464, 557, 1903
LweI	GCATC	8 cut(s)	194, 838, 1017, 1117, 1591, 1662, 1807, 1903
MaeI	CTAG	6 cut(s)	204, 491, 533, 1017, 1524, 1587
MaeII	ACGT	1 cut(s)	1305
MaeIII	GTNAC	3 cut(s)	1117, 1241, 1486
MalI	GATC	6 cut(s)	97, 274, 301, 1327, 1752, 1772
MboI	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
MboII	GAAGA	3 cut(s)	1780, 1913, 1916
MfeI	CAATTG	1 cut(s)	1806
MflI	RGATCY	2 cut(s)	95, 1325
MhlI	GDGCHC	3 cut(s)	435, 678, 1880
MlyI	GAGTC	3 cut(s)	204, 761, 917
MmeI	TCCRAC	4 cut(s)	178, 495, 1088, 1792
Mph1103I	ATGCAT	1 cut(s)	991
MroI	TCCGGA	1 cut(s)	1435
MroXI	GAANNNNTTC	1 cut(s)	80
MseI	TTAA	8 cut(s)	120, 324, 1005, 1203, 1218, 1680, 1737, 1799
MslI	CAYNNNNRTG	1 cut(s)	1233
MspA1I	CMGCKG	1 cut(s)	1083
MspI	CCGG	4 cut(s)	93, 1323, 1436, 1777
MspR9I	CCNGG	6 cut(s)	93, 680, 1323, 1539, 1575, 1778
MunI	CAATTG	1 cut(s)	1806
Mva1269I	GAATGC	2 cut(s)	287, 991
MvaI	CCWGG	3 cut(s)	680, 1539, 1575
MvnI	CGCG	1 cut(s)	1083
MwoI	GCNNNNNNNGC	3 cut(s)	361, 1588, 1851
NciI	CCSGG	3 cut(s)	93, 1323, 1778
NcoI	CCATGG	3 cut(s)	71, 1482, 1667
NdeII	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
NheI	GCTAGC	1 cut(s)	203
NlaIII	CATG	8 cut(s)	19, 75, 993, 1147, 1166, 1420, 1486, 1671
NlaIV	GGNNCC	5 cut(s)	676, 677, 976, 1480, 1572
NsiI	ATGCAT	1 cut(s)	991
NspI	RCATGY	1 cut(s)	993
PagI	TCATGA	1 cut(s)	1143
PctI	GAATGC	2 cut(s)	287, 991
PdmI	GAANNNNTTC	1 cut(s)	80
PfeI	GAWTC	3 cut(s)	380, 935, 1087
PflFI	GACNNNGTC	1 cut(s)	907
PfoI	TCCNGGA	2 cut(s)	91, 1321
PkrI	GCNGC	4 cut(s)	209, 454, 572, 1918
PleI	GAGTC	3 cut(s)	203, 760, 916
PpsI	GAGTC	3 cut(s)	203, 760, 916
PshBI	ATTAAT	1 cut(s)	1218
Psp6I	CCWGG	3 cut(s)	678, 1537, 1573
PspGI	CCWGG	3 cut(s)	678, 1537, 1573
PspN4I	GGNNCC	5 cut(s)	676, 677, 976, 1480, 1572
PspOMI	GGGCCC	1 cut(s)	674
PspPI	GGNCC	4 cut(s)	674, 675, 1169, 1479
PsuI	RGATCY	2 cut(s)	95, 1325
PsyI	GACNNNGTC	1 cut(s)	907
RsaI	GTAC	5 cut(s)	25, 617, 948, 1079, 1184
RsaNI	GTAC	5 cut(s)	24, 616, 947, 1078, 1183
RseI	CAYNNNNRTG	1 cut(s)	1233
SacII	CCGCGG	1 cut(s)	1084
SaqAI	TTAA	8 cut(s)	120, 324, 1005, 1203, 1218, 1680, 1737, 1799
SatI	GCNGC	4 cut(s)	208, 453, 571, 1917
Sau3AI	GATC	6 cut(s)	95, 272, 299, 1325, 1750, 1770
Sau96I	GGNCC	4 cut(s)	674, 675, 1169, 1479
ScaI	AGTACT	1 cut(s)	617
SchI	GAGTC	3 cut(s)	204, 761, 917
ScrFI	CCNGG	6 cut(s)	93, 680, 1323, 1539, 1575, 1778
SduI	GDGCHC	3 cut(s)	435, 678, 1880
SfaNI	GCATC	8 cut(s)	194, 838, 1017, 1117, 1591, 1662, 1807, 1903
SfcI	CTRYAG	4 cut(s)	42, 331, 456, 881
Sfr303I	CCGCGG	1 cut(s)	1084
SgrBI	CCGCGG	1 cut(s)	1084
SinI	GGWCC	2 cut(s)	1169, 1479
SmiMI	CAYNNNNRTG	1 cut(s)	1233
SmlI	CTYRAG	4 cut(s)	99, 405, 698, 1639
SmoI	CTYRAG	4 cut(s)	99, 405, 698, 1639
SpeI	ACTAGT	1 cut(s)	1523
SsiI	CCGC	4 cut(s)	208, 1081, 1083, 1167
SspMI	CTAG	6 cut(s)	204, 491, 533, 1017, 1524, 1587
StyD4I	CCNGG	6 cut(s)	91, 678, 1321, 1537, 1573, 1776
StyI	CCWWGG	4 cut(s)	71, 1482, 1586, 1667
TaaI	ACNGT	5 cut(s)	228, 513, 885, 1247, 1335
TaiI	ACGT	1 cut(s)	1308
TaqI	TCGA	3 cut(s)	193, 805, 1308
TatI	WGTACW	3 cut(s)	23, 615, 1182
TauI	GCSGC	1 cut(s)	210
TfiI	GAWTC	3 cut(s)	380, 935, 1087
Tru1I	TTAA	8 cut(s)	120, 324, 1005, 1203, 1218, 1680, 1737, 1799
Tru9I	TTAA	8 cut(s)	120, 324, 1005, 1203, 1218, 1680, 1737, 1799
TscAI	CASTG	7 cut(s)	936, 1016, 1201, 1240, 1252, 1340, 1856
TseI	GCWGC	3 cut(s)	452, 570, 1916
TspRI	CASTG	7 cut(s)	936, 1016, 1201, 1240, 1252, 1340, 1856
Tth111I	GACNNNGTC	1 cut(s)	907
VpaK11BI	GGWCC	2 cut(s)	1169, 1479
VspI	ATTAAT	1 cut(s)	1218
XagI	CCTNNNNNAGG	1 cut(s)	1825
XapI	RAATTY	4 cut(s)	61, 337, 585, 1907
XceI	RCATGY	1 cut(s)	993
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1665
XmaJI	CCTAGG	1 cut(s)	1586
XmnI	GAANNNNTTC	1 cut(s)	80
XspI	CTAG	6 cut(s)	204, 491, 533, 1017, 1524, 1587
ZrmI	AGTACT	1 cut(s)	617
Zsp2I	ATGCAT	1 cut(s)	991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.