Rh1CG115100
NAC Family

inactive poly ADP-ribose polymerase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
23122710 .. 23129840
7131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG115100.1

Sequence Viewer

Length: 1521 bp
ATGGAAGCAAAGATCGCAAAGGCATTGGATAGTGGTCGACTCTGTGTAAAGAGAAAGCGGGCAAAGAAGCCGACCTTGAGTAAGCATCGAGGCTTACCAAAGAAGCCGACCTTGAGTAAGCTCCGAAAGCGAAGGAAATTGTATGGATGCGGAACCAAACTCATGAGGTTTGAATCTCATGTTAGACGATCTTTACTTTCATCCTATTCAAATTTTACAAGAACTGGTGTGCCACAGCGTCTGATGTTTTACCAGAATGGCGAATGGAACAATTATCCTCAGGTTCTGGTTGACTTGGTTAGGAAAGATCTTCAGATAAAGAAAGCAGCTATCAAGATTGAGTCAAATGGTGATCATTTACTGCTTGATTTTTTGCATATGTTCCAGTTGAACTTGAGAACAGGTGTACAACACCCTATTGCTTGGATTGACGAAGCTGGTAGTTGCTTCTTTCCGGAATTTTACAGCGACGATGAAGATGAGCCAAATGGCAACTGGCGGCATGCAGATTGCAACGATCAGGATCCCTTAGTTGACGAGTGTTGTGGGTCTTGTGAGATTAAACTGCATCTGGAAATTGAAATAGATGGAATGGATCAACCTGAGTTGAAGGAATCTAGTGGGGAGTCAAATGGTTTAGTAAAGAAAATTCAGATTGATCAAATACCTGCCAGTAGTGGTTATGTGATGGAAGTTGAGAACAGTTGCAATGGAGGAGGTGGTCCACAAGTTGATGAAGATGTTGAGGATAATCAGCAGATGAGAAAGAACTTTGCTAGAGCAACTGAAACTCTAAATAGAAAGCTGGACTGTGATACTGTTCGTAATATATTTTTTAAAGGACTGAACACTTGTGATGCTGCTGAGCTTGTTGATATATACCGATGCTCAAGTAATCTGATGCAAGCTCGACTGGAACTTTTCGAGAAACAGGTTGAAATTACTAAAACATTTCGTGGAGACGCAAATGTACGATATGCTTGGCTTGCTTCTTCAAAAGGAGAACTTTCGACTATATTAATGTATGGGCTTGGTCATTGTGGACTGGCAGCAATTAAGCCCATTTATGGTACTGGTGTCCATCTCACAGCGGCTAGCTTCTCCAACACCTGTGCAAGTTATTGTGATGTTGATGAAAATGGAGTACGGCACATGATATTATGTCGTGTCATAATGGGAAATATGGAGTTACTTCACCCTGAAAGTAAACAGTTTCATCCCTGCAGTCAAGATTATGATAGTGGAGTGGATGATCTTCAGGATCCAAAAAATTACATTGTCTGGAATATGAACATCAATACACACATATATCCAGAATTTGTTGTTAGTTTCAAGCTCTCATCCAATACTGAAGGACATCCAATTGGAAGTGAGAAAAAGCATGGAGTTTCAGGGGTTACGACATACGTCCAGGGACCCAAGGGCTTTTTGCAATTACAGTCACCTGCAATTGATAAAGTGCGTGCAAAAAATAAGAAAGATTTATTTAGTTATTATTATTTTTTGGTGTTTGCTTTATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

57.24

Weight (kDa)

7.19

Isoelectric Point (pI)

37.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WWE_5 PF23467 72 - 151 9.3e-35 WWE domain
PARP PF00644 288 - 402 6e-06 Poly(ADP-ribose) polymerase catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1453
Acc36I ACCTGC 2 cut(s) 676, 1453
AccI GTMKAC 1 cut(s) 37
AccIII TCCGGA 1 cut(s) 454
AciI CCGC 4 cut(s) 58, 150, 499, 1091
AclWI GGATC 5 cut(s) 518, 531, 603, 1256, 1269
AcsI RAATTY 4 cut(s) 211, 458, 648, 1316
AcuI CTGAAG 3 cut(s) 296, 1241, 1371
AfaI GTAC 4 cut(s) 408, 972, 1072, 1146
AfiI CCNNNNNNNGG 1 cut(s) 1067
AgsI TTSAA 8 cut(s) 173, 210, 391, 581, 610, 938, 996, 1333
AjnI CCWGG 1 cut(s) 1410
AluBI AGCT 8 cut(s) 121, 329, 437, 805, 868, 908, 1098, 1336
AluI AGCT 8 cut(s) 121, 329, 437, 805, 868, 908, 1098, 1336
Alw26I GTCTC 1 cut(s) 954
AlwI GGATC 5 cut(s) 518, 531, 603, 1256, 1269
AlwNI CAGNNNCTG 2 cut(s) 241, 286
Aor13HI TCCGGA 1 cut(s) 454
ApeKI GCWGC 3 cut(s) 326, 860, 1049
ApoI RAATTY 4 cut(s) 211, 458, 648, 1316
AseI ATTAAT 1 cut(s) 1019
AspS9I GGNCC 2 cut(s) 722, 1415
AsuHPI GGTGA 3 cut(s) 362, 1187, 1434
AsuNHI GCTAGC 1 cut(s) 1094
AvaII GGWCC 2 cut(s) 722, 1415
AxyI CCTNAGG 1 cut(s) 279
BaeI ACNNNNGTAYC 2 cut(s) 1062, 1095
BamHI GGATCC 2 cut(s) 523, 1261
BbvI GCAGC 3 cut(s) 338, 847, 1061
BccI CCATC 3 cut(s) 581, 682, 1089
BceAI ACGGC 1 cut(s) 1163
BciT130I CCWGG 1 cut(s) 1412
BclI TGATCA 2 cut(s) 352, 658
BcoDI GTCTC 1 cut(s) 954
BfaI CTAG 3 cut(s) 618, 777, 1095
BfmI CTRYAG 1 cut(s) 1222
BfuAI ACCTGC 2 cut(s) 676, 1453
BglII AGATCT 1 cut(s) 307
BisI GCNGC 5 cut(s) 327, 500, 861, 1050, 1092
BlpI GCTNAGC 1 cut(s) 864
BlsI GCNGC 5 cut(s) 328, 501, 862, 1051, 1093
Bme1390I CCNGG 1 cut(s) 1412
Bme18I GGWCC 2 cut(s) 722, 1415
BmgT120I GGNCC 2 cut(s) 722, 1415
BmiI GGNNCC 5 cut(s) 154, 525, 1263, 1416, 1417
BmrFI CCNGG 1 cut(s) 1412
BmsI GCATC 6 cut(s) 94, 137, 577, 847, 875, 891
BmtI GCTAGC 1 cut(s) 1098
BoxI GACNNNNGTC 1 cut(s) 1406
Bpu1102I GCTNAGC 1 cut(s) 864
BpuEI CTTGAG 4 cut(s) 97, 133, 415, 874
BsaBI GATNNNNATC 1 cut(s) 522
BsaJI CCNNGG 2 cut(s) 1411, 1419
BsaWI WCCGGW 1 cut(s) 454
Bsc4I CCNNNNNNNGG 1 cut(s) 1067
Bse1I ACTGG 7 cut(s) 229, 385, 500, 672, 918, 1050, 1078
Bse21I CCTNAGG 1 cut(s) 279
Bse3DI GCAATG 1 cut(s) 715
Bse8I GATNNNNATC 1 cut(s) 522
BseAI TCCGGA 1 cut(s) 454
BseBI CCWGG 1 cut(s) 1412
BseDI CCNNGG 2 cut(s) 1411, 1419
BseGI GGATG 6 cut(s) 152, 200, 1216, 1255, 1340, 1357
BseJI GATNNNNATC 1 cut(s) 522
BseLI CCNNNNNNNGG 1 cut(s) 1067
BseMI GCAATG 1 cut(s) 715
BseMII CTCAG 3 cut(s) 293, 594, 855
BseNI ACTGG 7 cut(s) 229, 385, 500, 672, 918, 1050, 1078
BseRI GAGGAG 1 cut(s) 729
BseXI GCAGC 3 cut(s) 338, 847, 1061
BsiSI CCGG 1 cut(s) 455
BslFI GGGAC 1 cut(s) 1428
BslI CCNNNNNNNGG 1 cut(s) 1067
BsmAI GTCTC 1 cut(s) 954
BsmBI CGTCTC 1 cut(s) 954
BsmFI GGGAC 1 cut(s) 1428
Bsp13I TCCGGA 1 cut(s) 454
Bsp1407I TGTACA 1 cut(s) 406
Bsp1720I GCTNAGC 1 cut(s) 864
BspACI CCGC 4 cut(s) 58, 150, 499, 1091
BspCNI CTCAG 3 cut(s) 292, 595, 856
BspEI TCCGGA 1 cut(s) 454
BspHI TCATGA 1 cut(s) 162
BspLI GGNNCC 5 cut(s) 154, 525, 1263, 1416, 1417
BspMAI CTGCAG 1 cut(s) 1226
BspMI ACCTGC 2 cut(s) 676, 1453
BspOI GCTAGC 1 cut(s) 1098
BspPI GGATC 5 cut(s) 518, 531, 603, 1256, 1269
BsrDI GCAATG 1 cut(s) 715
BsrGI TGTACA 1 cut(s) 406
BsrI ACTGG 7 cut(s) 229, 385, 500, 672, 918, 1050, 1078
BssECI CCNNGG 2 cut(s) 1411, 1419
BssT1I CCWWGG 1 cut(s) 1419
Bst2UI CCWGG 1 cut(s) 1412
Bst4CI ACNGT 5 cut(s) 704, 812, 820, 1212, 1440
BstAUI TGTACA 1 cut(s) 406
BstC8I GCNNGC 6 cut(s) 60, 504, 906, 987, 1096, 1464
BstDEI CTNAG 4 cut(s) 279, 529, 603, 864
BstF5I GGATG 6 cut(s) 152, 200, 1216, 1255, 1340, 1357
BstMAI GTCTC 1 cut(s) 954
BstMWI GCNNNNNNNGC 3 cut(s) 14, 127, 986
BstNI CCWGG 1 cut(s) 1412
BstNSI RCATGY 1 cut(s) 506
BstPAI GACNNNNGTC 1 cut(s) 1406
BstSCI CCNGG 1 cut(s) 1410
BstSFI CTRYAG 1 cut(s) 1222
BstV1I GCAGC 3 cut(s) 338, 847, 1061
BstX2I RGATCY 3 cut(s) 307, 523, 1261
BstYI RGATCY 3 cut(s) 307, 523, 1261
Bsu36I CCTNAGG 1 cut(s) 279
BtsCI GGATG 6 cut(s) 152, 200, 1216, 1255, 1340, 1357
BveI ACCTGC 2 cut(s) 676, 1453
Cac8I GCNNGC 6 cut(s) 60, 504, 906, 987, 1096, 1464
CaiI CAGNNNCTG 2 cut(s) 241, 286
CciI TCATGA 1 cut(s) 162
Cfr13I GGNCC 2 cut(s) 722, 1415
CseI GACGC 2 cut(s) 227, 971
Csp6I GTAC 4 cut(s) 407, 971, 1071, 1145
CviAII CATG 5 cut(s) 163, 179, 503, 1153, 1382
CviQI GTAC 4 cut(s) 407, 971, 1071, 1145
DdeI CTNAG 4 cut(s) 279, 529, 603, 864
DraI TTTAAA 1 cut(s) 838
Eco130I CCWWGG 1 cut(s) 1419
Eco47I GGWCC 2 cut(s) 722, 1415
Eco57I CTGAAG 3 cut(s) 296, 1241, 1371
Eco81I CCTNAGG 1 cut(s) 279
EcoO109I RGGNCCY 1 cut(s) 1415
EcoRII CCWGG 1 cut(s) 1410
EcoT14I CCWWGG 1 cut(s) 1419
ErhI CCWWGG 1 cut(s) 1419
Esp3I CGTCTC 1 cut(s) 954
FaeI CATG 5 cut(s) 166, 182, 506, 1156, 1385
FalI AAGNNNNNCTT 6 cut(s) 59, 91, 95, 127, 990, 1022
FaqI GGGAC 1 cut(s) 1428
FatI CATG 5 cut(s) 162, 178, 502, 1152, 1381
FauI CCCGC 1 cut(s) 51
FauNDI CATATG 1 cut(s) 378
FbaI TGATCA 2 cut(s) 352, 658
FblI GTMKAC 1 cut(s) 37
Fnu4HI GCNGC 5 cut(s) 327, 500, 861, 1050, 1092
FokI GGATG 6 cut(s) 159, 187, 1203, 1262, 1327, 1344
Fsp4HI GCNGC 5 cut(s) 327, 500, 861, 1050, 1092
FspBI CTAG 3 cut(s) 618, 777, 1095
GluI GCNGC 5 cut(s) 327, 500, 861, 1050, 1092
HapII CCGG 1 cut(s) 455
HgaI GACGC 2 cut(s) 227, 971
Hin1II CATG 5 cut(s) 166, 182, 506, 1156, 1385
HincII GTYRAC 3 cut(s) 38, 292, 535
HindII GTYRAC 3 cut(s) 38, 292, 535
HinfI GANTC 5 cut(s) 39, 173, 341, 614, 626
HpaII CCGG 1 cut(s) 455
HphI GGTGA 3 cut(s) 362, 1187, 1434
Hpy166II GTNNAC 7 cut(s) 38, 292, 407, 535, 725, 1043, 1208
Hpy188I TCNGA 5 cut(s) 125, 243, 315, 654, 900
Hpy8I GTNNAC 7 cut(s) 38, 292, 407, 535, 725, 1043, 1208
Hpy99I CGWCG 1 cut(s) 473
HpyAV CCTTC 3 cut(s) 126, 604, 1346
HpyCH4III ACNGT 5 cut(s) 704, 812, 820, 1212, 1440
HpyCH4IV ACGT 1 cut(s) 1407
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 127, 986
HpyF3I CTNAG 4 cut(s) 279, 529, 603, 864
HpySE526I ACGT 1 cut(s) 1407
Hsp92II CATG 5 cut(s) 166, 182, 506, 1156, 1385
KflI GGGWCCC 1 cut(s) 1415
Kpn2I TCCGGA 1 cut(s) 454
Ksp22I TGATCA 2 cut(s) 352, 658
LmnI GCTCC 1 cut(s) 126
Lsp1109I GCAGC 3 cut(s) 338, 847, 1061
LweI GCATC 6 cut(s) 94, 137, 577, 847, 875, 891
MaeI CTAG 3 cut(s) 618, 777, 1095
MaeII ACGT 1 cut(s) 1407
MaeIII GTNAC 3 cut(s) 1188, 1396, 1440
MboII GAAGA 5 cut(s) 302, 488, 749, 984, 1247
MfeI CAATTG 2 cut(s) 1362, 1449
MflI RGATCY 3 cut(s) 307, 523, 1261
MlyI GAGTC 3 cut(s) 33, 350, 635
MmeI TCCRAC 1 cut(s) 1128
MnlI CCTC 6 cut(s) 83, 159, 288, 707, 710, 739
MroI TCCGGA 1 cut(s) 454
MseI TTAA 4 cut(s) 561, 837, 1019, 1056
MspA1I CMGCKG 1 cut(s) 1091
MspI CCGG 1 cut(s) 455
MspR9I CCNGG 1 cut(s) 1412
MunI CAATTG 2 cut(s) 1362, 1449
MvaI CCWGG 1 cut(s) 1412
MwoI GCNNNNNNNGC 3 cut(s) 14, 127, 986
NdeI CATATG 1 cut(s) 378
NheI GCTAGC 1 cut(s) 1094
NlaIII CATG 5 cut(s) 166, 182, 506, 1156, 1385
NlaIV GGNNCC 5 cut(s) 154, 525, 1263, 1416, 1417
NmuCI GTSAC 1 cut(s) 1440
NspI RCATGY 1 cut(s) 506
PaeI GCATGC 1 cut(s) 506
PagI TCATGA 1 cut(s) 162
PaqCI CACCTGC 1 cut(s) 1453
PfeI GAWTC 2 cut(s) 173, 614
PkrI GCNGC 5 cut(s) 328, 501, 862, 1051, 1093
PleI GAGTC 3 cut(s) 33, 349, 634
PpsI GAGTC 3 cut(s) 33, 349, 634
PpuMI RGGWCCY 1 cut(s) 1415
PshAI GACNNNNGTC 1 cut(s) 1406
PshBI ATTAAT 1 cut(s) 1019
Psp5II RGGWCCY 1 cut(s) 1415
Psp6I CCWGG 1 cut(s) 1410
PspGI CCWGG 1 cut(s) 1410
PspN4I GGNNCC 5 cut(s) 154, 525, 1263, 1416, 1417
PspPI GGNCC 2 cut(s) 722, 1415
PspPPI RGGWCCY 1 cut(s) 1415
PstI CTGCAG 1 cut(s) 1226
PstNI CAGNNNCTG 2 cut(s) 241, 286
PsuI RGATCY 3 cut(s) 307, 523, 1261
RsaI GTAC 4 cut(s) 408, 972, 1072, 1146
RsaNI GTAC 4 cut(s) 407, 971, 1071, 1145
SalI GTCGAC 1 cut(s) 36
SaqAI TTAA 4 cut(s) 561, 837, 1019, 1056
SatI GCNGC 5 cut(s) 327, 500, 861, 1050, 1092
Sau96I GGNCC 2 cut(s) 722, 1415
SchI GAGTC 3 cut(s) 33, 350, 635
ScrFI CCNGG 1 cut(s) 1412
SfaNI GCATC 6 cut(s) 94, 137, 577, 847, 875, 891
SfcI CTRYAG 1 cut(s) 1222
SinI GGWCC 2 cut(s) 722, 1415
SmlI CTYRAG 4 cut(s) 76, 112, 394, 889
SmoI CTYRAG 4 cut(s) 76, 112, 394, 889
SphI GCATGC 1 cut(s) 506
SsiI CCGC 4 cut(s) 58, 150, 499, 1091
SspMI CTAG 3 cut(s) 618, 777, 1095
StyD4I CCNGG 1 cut(s) 1410
StyI CCWWGG 1 cut(s) 1419
TaaI ACNGT 5 cut(s) 704, 812, 820, 1212, 1440
TaiI ACGT 1 cut(s) 1410
TaqI TCGA 5 cut(s) 37, 88, 910, 924, 1010
TatI WGTACW 1 cut(s) 406
TauI GCSGC 2 cut(s) 502, 1094
TfiI GAWTC 2 cut(s) 173, 614
Tru1I TTAA 4 cut(s) 561, 837, 1019, 1056
Tru9I TTAA 4 cut(s) 561, 837, 1019, 1056
TseFI GTSAC 1 cut(s) 1440
TseI GCWGC 3 cut(s) 326, 860, 1049
Tsp45I GTSAC 1 cut(s) 1440
TspDTI ATGAA 6 cut(s) 189, 489, 750, 1149, 1205, 1304
VpaK11BI GGWCC 2 cut(s) 722, 1415
VspI ATTAAT 1 cut(s) 1019
XapI RAATTY 4 cut(s) 211, 458, 648, 1316
XceI RCATGY 1 cut(s) 506
XcmI CCANNNNNNNNNTGG 1 cut(s) 492
XmiI GTMKAC 1 cut(s) 37
XspI CTAG 3 cut(s) 618, 777, 1095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.