Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002330

Physical Location & Seq

Genomic Coordinates Forward (+)

40785386 .. 40791896

Gene Structure 6511 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00247470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGAAACAGACAGCGTTAAGGTCTTGGATGATGACCACAAAATAGTGGTCAATTTGAAGGGGAAAACTGCGACAAAAACTGCATCAGTTCGAGTCAGAGCTAGCCGCACAGTGTTGTCTCAACAGTCCAGCTCACCTTCATCATATAACAAACTTGGCAAGCGTAAACGATCAGATGAATGCAAAACCAAGTGTAGATCAAACTTCAGAAGCTCTGTGCTTAAAAACTACAGAAATTTCAGCAAAAGTGGGCTTCCTCAGCGATTTCTATACCATGAATCTGGGGAGTGGATAGATTATCCTCGAGAAATCGTTGACTTGGTTAGGGAGCACTTTCAACTGAAAAATGCAGCTATAGAAGTGGATTTGAATGGCTGTCGTTTGTTGCTAGATGTTCTGTATATGATACAGTTGGAAGTGAAAACAGGTCTAGTGAAGCAAATTGCTTGGATTGATGAAGCAGGTTGCTGCTTCTTTCCAGAAATTCATTCCTGTTTTTTACAAAATGAAAAGTACTACGATTCTGAATTACAGCAGAGTGATTTTCCTGTTGTGCTGAAAGAGGCAAATGGGCCCCAGGATATCACATTGAAGCTTGAGATTGGAATAACTGGATTGAATAGCTCCAATACAGAGGAATGTGTTGAGGAGTCAAATAGTCCTGCTAAGAGGATTAAGATTGAACAAACCCCTCTTGGTAATCGAGACTATATGAAAGTAAATGACTATTGCAACCAAGTATCAGATGCCAAAATGCAGGAAATCAATAAGGGAACTCTACTGTTTGATGAAAATATAATGACCGAGTCTCCAGTTTTCGTTGAAACACTGGATTCAAATTCAGTACGAGACCTGTTTGATAAGGGCATTGGTTCCTCTTTGAATGCATGTATGGTAGAGATTAAGCACTGCTCTAGTCATTTGATGCAAGCAAGAGCTGAGCTGTTCCAAAAGCAGGTTGAATTAACAAAGAAGTACCGCGGTAATCCAAATGTCCAGTATGGTTGGATGGCTGTTACTAAAGATGCACTATCTAAAATCATGATGTATGGGCTTGGGCATGGTGGACCTATGAGTATGTACTCAAATGGCACTGGAGTTAAATTGACATCTGTTAATCACACTCATATCAGTGCAAGTTACAGTGATGATGACGAAAATGGGATAAGATACATAATGTTATGCCGTGTTATTATGGGAAATGTCGAAATGGTCAATCCCGGATCTGGACAGTGCCATCCCAGTTCTATACAATTTGATAGTGGAGTTGATGACCTTCAAAATCCACGCCATCTTATAGTTTGGAGTATGAACATGAACACCCATATTTTTCCGGAGTATGTTGTCAGTTTCAAGACTTTTTTGAAGGCTGAAGGGACCATGTTTACAGAAAGCAGAGGTCATCTTTCTGGAATTACAACTAGTGATGAGTGTCCAGGCCAGTTGCAGTTCAACGGCTCGCCAATGGAACCAGGGAGGCATCCTAGGCCAGCTTTAGAATATGAGAAATCACAGGAAAAGCCTGTTGAAATTGGCTCAAGCTCTTTGACAACTCCAAAATCCCCATGGATGCCATTTAAAGCGCTATTTGAAGCTATTTCAAAAGAAGTTGCTCCGAAAGATATGAAATTGGTTAATGTTCACTATGATCTATTCAGGTGCAAGAAGATCAGCCGGGATGGTTTTATTCAGAAGTTAAGAGCAATTGTTGGAGATGCCTTGCTGAGGTCAACCATAATGAGCCTTCAGTGCAAGCTACCACCAAGAACTGCGTGCCCTATGAAACTGCCAAAACAGGAAGAAAAACAGGAAGAAGAATTTGATGCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARP RST

Protein Analysis

610

Amino Acids

68.84

Weight (kDa)

6.75

Isoelectric Point (pI)

52.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WWE_5	PF23467	80 - 159	1.8e-32	WWE domain
RST	PF12174	519 - 583	7.2e-27	RCD1-SRO-TAF4 (RST) plant domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002330)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT2G35510 AT2G35510 AT2G35510
fragaria_vesca	FvH4_5g23020 FvH4_5g23040
malus_domestica	MD02G1259200.v1.1 MD07G1061500.v1.1
prunus_persica	Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1
pyrus_communis	pycom02g22060
rosa_chinensis	RchiOBHm_Chr1g0331751 RchiOBHm_Chr7g0211751
rosa_laevigata	RLG00000002971 RLG00000029717
rosa_multiflora	Rmu_sc0001875.1_g000022 Rmu_ssc0000089.1_g000021
rosa_roxburghii	Rroxscaffold_3G00247470 Rroxscaffold_4G00318810
rosa_rugosa	Rorug01G0096000 Rorug01G0096100 Rorug07G0128300
rosa_samantha	Rh1AG120100 Rh1BG091700 Rh1CG115100 Rh1DG125400 Rh7AG261000 Rh7BG254500 Rh7CG277500 Rh7DG267600
rosa_wichuraiana	Rw1G009710 Rw7G022240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	452, 946
AccII	CGCG	1 cut(s)	981
AccIII	TCCGGA	1 cut(s)	1333
AciI	CCGC	3 cut(s)	106, 979, 981
AclWI	GGATC	1 cut(s)	1231
AcsI	RAATTY	4 cut(s)	235, 483, 838, 1817
AcuI	CTGAAG	3 cut(s)	190, 1392, 1730
AfaI	GTAC	4 cut(s)	515, 846, 977, 1082
AfeI	AGCGCT	1 cut(s)	1584
AfiI	CCNNNNNNNGG	3 cut(s)	955, 1226, 1725
AhlI	ACTAGT	1 cut(s)	1421
AjnI	CCWGG	3 cut(s)	576, 1435, 1471
Alw21I	GWGCWC	1 cut(s)	333
Alw26I	GTCTC	4 cut(s)	123, 699, 813, 843
AlwI	GGATC	1 cut(s)	1231
Ama87I	CYCGRG	1 cut(s)	303
Aor13HI	TCCGGA	1 cut(s)	1333
Aor51HI	AGCGCT	1 cut(s)	1584
AoxI	GGCC	3 cut(s)	572, 1438, 1487
ApaI	GGGCCC	1 cut(s)	576
ApeKI	GCWGC	3 cut(s)	350, 468, 1826
ApoI	RAATTY	4 cut(s)	235, 483, 838, 1817
ArsI	GACNNNNNNTTYG	2 cut(s)	33, 65
AspA2I	CCTAGG	1 cut(s)	1484
AspLEI	GCGC	1 cut(s)	1585
AspS9I	GGNCC	4 cut(s)	572, 573, 1067, 1377
AsuC2I	CCSGG	2 cut(s)	1221, 1676
AsuHPI	GGTGA	1 cut(s)	126
AsuNHI	GCTAGC	1 cut(s)	101
AvaI	CYCGRG	1 cut(s)	303
AvaII	GGWCC	2 cut(s)	1067, 1377
AvrII	CCTAGG	1 cut(s)	1484
BaeGI	GKGCMC	2 cut(s)	576, 1778
BanII	GRGCYC	1 cut(s)	576
Bbv12I	GWGCWC	1 cut(s)	333
BbvCI	CCTCAGC	2 cut(s)	258, 1724
BbvI	GCAGC	3 cut(s)	362, 455, 1813
BccI	CCATC	4 cut(s)	1003, 1245, 1299, 1673
BceAI	ACGGC	2 cut(s)	1170, 1471
BciT130I	CCWGG	3 cut(s)	578, 1437, 1473
BcnI	CCSGG	2 cut(s)	1221, 1676
BcoDI	GTCTC	4 cut(s)	123, 699, 813, 843
BcuI	ACTAGT	1 cut(s)	1421
BfaI	CTAG	6 cut(s)	102, 389, 431, 915, 1422, 1485
BfmI	CTRYAG	2 cut(s)	229, 354
BfoI	RGCGCY	1 cut(s)	1586
BfuAI	ACCTGC	2 cut(s)	452, 946
BisI	GCNGC	4 cut(s)	106, 351, 469, 1827
BlnI	CCTAGG	1 cut(s)	1484
BlpI	GCTNAGC	1 cut(s)	939
BlsI	GCNGC	4 cut(s)	107, 352, 470, 1828
BmcAI	AGTACT	1 cut(s)	515
Bme1390I	CCNGG	5 cut(s)	578, 1221, 1437, 1473, 1676
Bme18I	GGWCC	2 cut(s)	1067, 1377
BmeT110I	CYCGRG	1 cut(s)	303
BmgT120I	GGNCC	4 cut(s)	572, 573, 1067, 1377
BmiI	GGNNCC	5 cut(s)	574, 575, 874, 1378, 1470
BmrFI	CCNGG	5 cut(s)	578, 1221, 1437, 1473, 1676
BmrI	ACTGGG	1 cut(s)	1236
BmsI	GCATC	8 cut(s)	92, 736, 915, 1015, 1489, 1560, 1705, 1813
BmtI	GCTAGC	1 cut(s)	105
BmuI	ACTGGG	1 cut(s)	1236
BpmI	CTGGAG	2 cut(s)	795, 1116
Bpu10I	CCTNAGC	2 cut(s)	258, 1724
Bpu1102I	GCTNAGC	1 cut(s)	939
BpuEI	CTTGAG	2 cut(s)	617, 1522
BpuMI	CCSGG	2 cut(s)	1221, 1676
BsaI	GGTCTC	1 cut(s)	843
BsaJI	CCNNGG	5 cut(s)	576, 979, 1472, 1484, 1565
BsaWI	WCCGGW	1 cut(s)	1333
BsaXI	ACNNNNNCTCC	2 cut(s)	793, 823
Bsc4I	CCNNNNNNNGG	3 cut(s)	955, 1226, 1725
Bse1I	ACTGG	7 cut(s)	616, 812, 834, 997, 1099, 1242, 1441
BseAI	TCCGGA	1 cut(s)	1333
BseBI	CCWGG	3 cut(s)	578, 1437, 1473
BseDI	CCNNGG	5 cut(s)	576, 979, 1472, 1484, 1565
BseGI	GGATG	6 cut(s)	34, 1014, 1237, 1480, 1575, 1684
BseLI	CCNNNNNNNGG	3 cut(s)	955, 1226, 1725
BseMII	CTCAG	3 cut(s)	272, 930, 1715
BseNI	ACTGG	7 cut(s)	616, 812, 834, 997, 1099, 1242, 1441
BseRI	GAGGAG	1 cut(s)	662
BseSI	GKGCMC	2 cut(s)	576, 1778
BseXI	GCAGC	3 cut(s)	362, 455, 1813
Bsh1236I	CGCG	1 cut(s)	981
BshFI	GGCC	3 cut(s)	574, 1440, 1489
BsiHKAI	GWGCWC	1 cut(s)	333
BsiHKCI	CYCGRG	1 cut(s)	303
BsiSI	CCGG	3 cut(s)	1221, 1334, 1675
BslFI	GGGAC	1 cut(s)	1390
BslI	CCNNNNNNNGG	3 cut(s)	955, 1226, 1725
BsmAI	GTCTC	4 cut(s)	123, 699, 813, 843
BsmFI	GGGAC	1 cut(s)	1390
BsmI	GAATGC	2 cut(s)	185, 889
BsnI	GGCC	3 cut(s)	574, 1440, 1489
Bso31I	GGTCTC	1 cut(s)	843
BsoBI	CYCGRG	1 cut(s)	303
Bsp120I	GGGCCC	1 cut(s)	572
Bsp1286I	GDGCHC	3 cut(s)	333, 576, 1778
Bsp13I	TCCGGA	1 cut(s)	1333
Bsp143I	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
Bsp1720I	GCTNAGC	1 cut(s)	939
Bsp19I	CCATGG	1 cut(s)	1565
BspACI	CCGC	3 cut(s)	106, 979, 981
BspANI	GGCC	3 cut(s)	574, 1440, 1489
BspCNI	CTCAG	3 cut(s)	271, 931, 1716
BspEI	TCCGGA	1 cut(s)	1333
BspFNI	CGCG	1 cut(s)	981
BspHI	TCATGA	1 cut(s)	1041
BspLI	GGNNCC	5 cut(s)	574, 575, 874, 1378, 1470
BspMI	ACCTGC	2 cut(s)	452, 946
BspOI	GCTAGC	1 cut(s)	105
BspPI	GGATC	1 cut(s)	1231
BspTNI	GGTCTC	1 cut(s)	843
BsrI	ACTGG	7 cut(s)	616, 812, 834, 997, 1099, 1242, 1441
BssECI	CCNNGG	5 cut(s)	576, 979, 1472, 1484, 1565
BssMI	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
BssT1I	CCWWGG	2 cut(s)	1484, 1565
Bst2UI	CCWGG	3 cut(s)	578, 1437, 1473
Bst4CI	ACNGT	6 cut(s)	112, 126, 411, 783, 1145, 1233
BstC8I	GCNNGC	7 cut(s)	103, 161, 930, 1460, 1491, 1754, 1774
BstDEI	CTNAG	4 cut(s)	258, 666, 939, 1724
BstDSI	CCRYGG	2 cut(s)	979, 1565
BstENI	CCTNNNNNAGG	1 cut(s)	1723
BstF5I	GGATG	6 cut(s)	34, 1014, 1237, 1480, 1575, 1684
BstFNI	CGCG	1 cut(s)	981
BstH2I	RGCGCY	1 cut(s)	1586
BstHHI	GCGC	1 cut(s)	1585
BstKTI	GATC	5 cut(s)	173, 200, 1226, 1651, 1671
BstMAI	GTCTC	4 cut(s)	123, 699, 813, 843
BstMBI	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
BstMWI	GCNNNNNNNGC	3 cut(s)	259, 1486, 1749
BstNI	CCWGG	3 cut(s)	578, 1437, 1473
BstNSI	RCATGY	1 cut(s)	891
BstSCI	CCNGG	5 cut(s)	576, 1219, 1435, 1471, 1674
BstSFI	CTRYAG	2 cut(s)	229, 354
BstSLI	GKGCMC	2 cut(s)	576, 1778
BstUI	CGCG	1 cut(s)	981
BstV1I	GCAGC	3 cut(s)	362, 455, 1813
BstX2I	RGATCY	1 cut(s)	1223
BstXI	CCANNNNNNTGG	1 cut(s)	281
BstYI	RGATCY	1 cut(s)	1223
BsuRI	GGCC	3 cut(s)	574, 1440, 1489
BtgI	CCRYGG	2 cut(s)	979, 1565
BtsCI	GGATG	6 cut(s)	34, 1014, 1237, 1480, 1575, 1684
BtsI	GCAGTG	1 cut(s)	907
BtsIMutI	CAGTG	8 cut(s)	117, 827, 907, 1092, 1138, 1150, 1238, 1754
BveI	ACCTGC	2 cut(s)	452, 946
Cac8I	GCNNGC	7 cut(s)	103, 161, 930, 1460, 1491, 1754, 1774
CciI	TCATGA	1 cut(s)	1041
CfoI	GCGC	1 cut(s)	1585
Cfr13I	GGNCC	4 cut(s)	572, 573, 1067, 1377
Cfr42I	CCGCGG	1 cut(s)	982
Csp6I	GTAC	4 cut(s)	514, 845, 976, 1081
CviAII	CATG	7 cut(s)	275, 888, 1042, 1061, 1315, 1381, 1566
CviQI	GTAC	4 cut(s)	514, 845, 976, 1081
DdeI	CTNAG	4 cut(s)	258, 666, 939, 1724
DpnI	GATC	5 cut(s)	172, 199, 1225, 1650, 1670
DpnII	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
DraI	TTTAAA	1 cut(s)	1579
Eco130I	CCWWGG	2 cut(s)	1484, 1565
Eco24I	GRGCYC	1 cut(s)	576
Eco31I	GGTCTC	1 cut(s)	843
Eco32I	GATATC	1 cut(s)	583
Eco47I	GGWCC	2 cut(s)	1067, 1377
Eco47III	AGCGCT	1 cut(s)	1584
Eco57I	CTGAAG	3 cut(s)	190, 1392, 1730
Eco88I	CYCGRG	1 cut(s)	303
EcoNI	CCTNNNNNAGG	1 cut(s)	1723
EcoO109I	RGGNCCY	1 cut(s)	573
EcoRII	CCWGG	3 cut(s)	576, 1435, 1471
EcoRV	GATATC	1 cut(s)	583
EcoT14I	CCWWGG	2 cut(s)	1484, 1565
EcoT22I	ATGCAT	1 cut(s)	889
EcoT38I	GRGCYC	1 cut(s)	576
ErhI	CCWWGG	2 cut(s)	1484, 1565
FaeI	CATG	7 cut(s)	278, 891, 1045, 1064, 1318, 1384, 1569
FaqI	GGGAC	1 cut(s)	1390
FatI	CATG	7 cut(s)	274, 887, 1041, 1060, 1314, 1380, 1565
Fnu4HI	GCNGC	4 cut(s)	106, 351, 469, 1827
FokI	GGATG	6 cut(s)	41, 1021, 1224, 1467, 1582, 1691
FriOI	GRGCYC	1 cut(s)	576
Fsp4HI	GCNGC	4 cut(s)	106, 351, 469, 1827
FspBI	CTAG	6 cut(s)	102, 389, 431, 915, 1422, 1485
GlaI	GCGC	1 cut(s)	1584
GluI	GCNGC	4 cut(s)	106, 351, 469, 1827
GsuI	CTGGAG	2 cut(s)	795, 1116
HaeII	RGCGCY	1 cut(s)	1586
HaeIII	GGCC	3 cut(s)	574, 1440, 1489
HapII	CCGG	3 cut(s)	1221, 1334, 1675
HhaI	GCGC	1 cut(s)	1585
Hin1II	CATG	7 cut(s)	278, 891, 1045, 1064, 1318, 1384, 1569
Hin6I	GCGC	1 cut(s)	1583
HinP1I	GCGC	1 cut(s)	1583
HincII	GTYRAC	2 cut(s)	316, 1731
HindII	GTYRAC	2 cut(s)	316, 1731
HindIII	AAGCTT	1 cut(s)	593
HinfI	GANTC	6 cut(s)	93, 278, 521, 650, 806, 833
HpaII	CCGG	3 cut(s)	1221, 1334, 1675
HphI	GGTGA	1 cut(s)	126
Hpy166II	GTNNAC	6 cut(s)	167, 316, 1067, 1386, 1642, 1731
Hpy188I	TCNGA	7 cut(s)	98, 175, 209, 526, 745, 1617, 1692
Hpy188III	TCNNGA	8 cut(s)	305, 479, 704, 1042, 1227, 1334, 1354, 1410
Hpy8I	GTNNAC	6 cut(s)	167, 316, 1067, 1386, 1642, 1731
HpyAV	CCTTC	6 cut(s)	52, 147, 1286, 1360, 1367, 1754
HpyCH4III	ACNGT	6 cut(s)	112, 126, 411, 783, 1145, 1233
HpyF10VI	GCNNNNNNNGC	3 cut(s)	259, 1486, 1749
HpyF3I	CTNAG	4 cut(s)	258, 666, 939, 1724
Hsp92II	CATG	7 cut(s)	278, 891, 1045, 1064, 1318, 1384, 1569
HspAI	GCGC	1 cut(s)	1583
Kpn2I	TCCGGA	1 cut(s)	1333
KspI	CCGCGG	1 cut(s)	982
Kzo9I	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
LmnI	GCTCC	3 cut(s)	328, 629, 1618
Lsp1109I	GCAGC	3 cut(s)	362, 455, 1813
LweI	GCATC	8 cut(s)	92, 736, 915, 1015, 1489, 1560, 1705, 1813
MaeI	CTAG	6 cut(s)	102, 389, 431, 915, 1422, 1485
MaeIII	GTNAC	2 cut(s)	1015, 1139
MalI	GATC	5 cut(s)	172, 199, 1225, 1650, 1670
MboI	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
MboII	GAAGA	4 cut(s)	1678, 1811, 1823, 1826
MfeI	CAATTG	1 cut(s)	1704
MflI	RGATCY	1 cut(s)	1223
MhlI	GDGCHC	3 cut(s)	333, 576, 1778
MlyI	GAGTC	3 cut(s)	102, 659, 815
MmeI	TCCRAC	3 cut(s)	393, 986, 1690
Mph1103I	ATGCAT	1 cut(s)	889
MroI	TCCGGA	1 cut(s)	1333
MslI	CAYNNNNRTG	1 cut(s)	1131
MspA1I	CMGCKG	1 cut(s)	981
MspI	CCGG	3 cut(s)	1221, 1334, 1675
MspR9I	CCNGG	5 cut(s)	578, 1221, 1437, 1473, 1676
MunI	CAATTG	1 cut(s)	1704
Mva1269I	GAATGC	2 cut(s)	185, 889
MvaI	CCWGG	3 cut(s)	578, 1437, 1473
MvnI	CGCG	1 cut(s)	981
MwoI	GCNNNNNNNGC	3 cut(s)	259, 1486, 1749
NciI	CCSGG	2 cut(s)	1221, 1676
NcoI	CCATGG	1 cut(s)	1565
NdeII	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
NheI	GCTAGC	1 cut(s)	101
NlaIII	CATG	7 cut(s)	278, 891, 1045, 1064, 1318, 1384, 1569
NlaIV	GGNNCC	5 cut(s)	574, 575, 874, 1378, 1470
NsiI	ATGCAT	1 cut(s)	889
NspI	RCATGY	1 cut(s)	891
PaeR7I	CTCGAG	1 cut(s)	303
PagI	TCATGA	1 cut(s)	1041
PctI	GAATGC	2 cut(s)	185, 889
PfeI	GAWTC	3 cut(s)	278, 521, 833
PflFI	GACNNNGTC	1 cut(s)	805
PfoI	TCCNGGA	1 cut(s)	1219
PkrI	GCNGC	4 cut(s)	107, 352, 470, 1828
PleI	GAGTC	3 cut(s)	101, 658, 814
PpsI	GAGTC	3 cut(s)	101, 658, 814
Psp6I	CCWGG	3 cut(s)	576, 1435, 1471
PspGI	CCWGG	3 cut(s)	576, 1435, 1471
PspN4I	GGNNCC	5 cut(s)	574, 575, 874, 1378, 1470
PspOMI	GGGCCC	1 cut(s)	572
PspPI	GGNCC	4 cut(s)	572, 573, 1067, 1377
PsuI	RGATCY	1 cut(s)	1223
PsyI	GACNNNGTC	1 cut(s)	805
RsaI	GTAC	4 cut(s)	515, 846, 977, 1082
RsaNI	GTAC	4 cut(s)	514, 845, 976, 1081
RseI	CAYNNNNRTG	1 cut(s)	1131
SacII	CCGCGG	1 cut(s)	982
SatI	GCNGC	4 cut(s)	106, 351, 469, 1827
Sau3AI	GATC	5 cut(s)	170, 197, 1223, 1648, 1668
Sau96I	GGNCC	4 cut(s)	572, 573, 1067, 1377
ScaI	AGTACT	1 cut(s)	515
SchI	GAGTC	3 cut(s)	102, 659, 815
ScrFI	CCNGG	5 cut(s)	578, 1221, 1437, 1473, 1676
SduI	GDGCHC	3 cut(s)	333, 576, 1778
SfaNI	GCATC	8 cut(s)	92, 736, 915, 1015, 1489, 1560, 1705, 1813
SfcI	CTRYAG	2 cut(s)	229, 354
Sfr274I	CTCGAG	1 cut(s)	303
Sfr303I	CCGCGG	1 cut(s)	982
SgrBI	CCGCGG	1 cut(s)	982
SinI	GGWCC	2 cut(s)	1067, 1377
SlaI	CTCGAG	1 cut(s)	303
SmiMI	CAYNNNNRTG	1 cut(s)	1131
SmlI	CTYRAG	3 cut(s)	303, 596, 1537
SmoI	CTYRAG	3 cut(s)	303, 596, 1537
SpeI	ACTAGT	1 cut(s)	1421
SsiI	CCGC	3 cut(s)	106, 979, 981
SspMI	CTAG	6 cut(s)	102, 389, 431, 915, 1422, 1485
StyD4I	CCNGG	5 cut(s)	576, 1219, 1435, 1471, 1674
StyI	CCWWGG	2 cut(s)	1484, 1565
TaaI	ACNGT	6 cut(s)	112, 126, 411, 783, 1145, 1233
TaqI	TCGA	4 cut(s)	91, 304, 703, 1206
TaqII	GACCGA	1 cut(s)	818
TatI	WGTACW	2 cut(s)	513, 1080
TauI	GCSGC	1 cut(s)	108
TfiI	GAWTC	3 cut(s)	278, 521, 833
TscAI	CASTG	8 cut(s)	117, 834, 914, 1099, 1138, 1150, 1238, 1754
TseI	GCWGC	3 cut(s)	350, 468, 1826
TspRI	CASTG	8 cut(s)	117, 834, 914, 1099, 1138, 1150, 1238, 1754
Tth111I	GACNNNGTC	1 cut(s)	805
VpaK11BI	GGWCC	2 cut(s)	1067, 1377
XagI	CCTNNNNNAGG	1 cut(s)	1723
XapI	RAATTY	4 cut(s)	235, 483, 838, 1817
XceI	RCATGY	1 cut(s)	891
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1563
XhoI	CTCGAG	1 cut(s)	303
XmaJI	CCTAGG	1 cut(s)	1484
XspI	CTAG	6 cut(s)	102, 389, 431, 915, 1422, 1485
ZrmI	AGTACT	1 cut(s)	515
Zsp2I	ATGCAT	1 cut(s)	889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.