inactive poly ADP-ribose polymerase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT1G32230 AT2G35510 AT2G35510 AT2G35510 |
| fragaria_vesca | FvH4_5g23020 FvH4_5g23040 |
| malus_domestica | MD02G1259200.v1.1 MD07G1061500.v1.1 |
| prunus_persica | Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 Prupe.2G071200_v2.0.a1 |
| pyrus_communis | pycom02g22060 |
| rosa_chinensis | RchiOBHm_Chr1g0331751 RchiOBHm_Chr7g0211751 |
| rosa_laevigata | RLG00000002971 RLG00000029717 |
| rosa_multiflora | Rmu_sc0001875.1_g000022 Rmu_ssc0000089.1_g000021 |
| rosa_roxburghii | Rroxscaffold_3G00247470 Rroxscaffold_4G00318810 |
| rosa_rugosa | Rorug01G0096000 Rorug01G0096100 Rorug07G0128300 |
| rosa_samantha | Rh1AG120100 Rh1BG091700 Rh1CG115100 Rh1DG125400 Rh7AG261000 Rh7BG254500 Rh7CG277500 Rh7DG267600 |
| rosa_wichuraiana | Rw1G009710 Rw7G022240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1474 |
| Acc36I | ACCTGC | 2 cut(s) | 697, 1474 |
| AccI | GTMKAC | 1 cut(s) | 1685 |
| AccII | CGCG | 1 cut(s) | 978 |
| AccIII | TCCGGA | 1 cut(s) | 475 |
| AciI | CCGC | 5 cut(s) | 171, 520, 978, 1112, 1756 |
| AclWI | GGATC | 5 cut(s) | 539, 552, 624, 1277, 1290 |
| AcsI | RAATTY | 7 cut(s) | 232, 480, 669, 790, 1337, 1563, 1637 |
| AcuI | CTGAAG | 2 cut(s) | 317, 1392 |
| AfaI | GTAC | 4 cut(s) | 429, 993, 1093, 1167 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1088, 1503 |
| AflIII | ACRYGT | 1 cut(s) | 1173 |
| AgsI | TTSAA | 9 cut(s) | 194, 231, 412, 602, 631, 959, 1017, 1354, 1703 |
| AjnI | CCWGG | 2 cut(s) | 94, 1431 |
| Alw26I | GTCTC | 1 cut(s) | 975 |
| AlwI | GGATC | 5 cut(s) | 539, 552, 624, 1277, 1290 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 262, 307 |
| Aor13HI | TCCGGA | 1 cut(s) | 475 |
| ApeKI | GCWGC | 5 cut(s) | 83, 347, 881, 1070, 1547 |
| ApoI | RAATTY | 7 cut(s) | 232, 480, 669, 790, 1337, 1563, 1637 |
| AseI | ATTAAT | 1 cut(s) | 1040 |
| AspS9I | GGNCC | 3 cut(s) | 743, 1436, 1506 |
| AsuHPI | GGTGA | 4 cut(s) | 383, 1208, 1455, 1509 |
| AsuNHI | GCTAGC | 1 cut(s) | 1115 |
| AvaII | GGWCC | 3 cut(s) | 743, 1436, 1506 |
| AxyI | CCTNAGG | 1 cut(s) | 300 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1083, 1116 |
| BamHI | GGATCC | 2 cut(s) | 544, 1282 |
| BbvCI | CCTCAGC | 1 cut(s) | 1652 |
| BbvI | GCAGC | 5 cut(s) | 70, 359, 868, 1082, 1534 |
| BccI | CCATC | 2 cut(s) | 602, 703 |
| BceAI | ACGGC | 1 cut(s) | 1184 |
| BciT130I | CCWGG | 2 cut(s) | 96, 1433 |
| BclI | TGATCA | 2 cut(s) | 373, 679 |
| BcoDI | GTCTC | 1 cut(s) | 975 |
| BfaI | CTAG | 5 cut(s) | 386, 639, 798, 1067, 1116 |
| BfmI | CTRYAG | 1 cut(s) | 1243 |
| BfuAI | ACCTGC | 2 cut(s) | 697, 1474 |
| BglII | AGATCT | 1 cut(s) | 328 |
| BisI | GCNGC | 7 cut(s) | 84, 348, 521, 882, 1071, 1113, 1548 |
| BlpI | GCTNAGC | 2 cut(s) | 102, 885 |
| BlsI | GCNGC | 7 cut(s) | 85, 349, 522, 883, 1072, 1114, 1549 |
| Bme1390I | CCNGG | 2 cut(s) | 96, 1433 |
| Bme18I | GGWCC | 3 cut(s) | 743, 1436, 1506 |
| BmgT120I | GGNCC | 3 cut(s) | 743, 1436, 1506 |
| BmiI | GGNNCC | 6 cut(s) | 175, 546, 1284, 1437, 1438, 1508 |
| BmrFI | CCNGG | 2 cut(s) | 96, 1433 |
| BmsI | GCATC | 7 cut(s) | 115, 158, 598, 868, 896, 912, 1515 |
| BmtI | GCTAGC | 1 cut(s) | 1119 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1427 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 33, 65 |
| BpmI | CTGGAG | 1 cut(s) | 117 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1652 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 102, 885 |
| BpuEI | CTTGAG | 3 cut(s) | 154, 436, 895 |
| BsaBI | GATNNNNATC | 2 cut(s) | 33, 543 |
| BsaJI | CCNNGG | 4 cut(s) | 1432, 1440, 1520, 1572 |
| BsaWI | WCCGGW | 1 cut(s) | 475 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1088, 1503 |
| Bse1I | ACTGG | 7 cut(s) | 250, 406, 521, 693, 939, 1099, 1492 |
| Bse21I | CCTNAGG | 1 cut(s) | 300 |
| Bse3DI | GCAATG | 1 cut(s) | 736 |
| Bse8I | GATNNNNATC | 2 cut(s) | 33, 543 |
| BseAI | TCCGGA | 1 cut(s) | 475 |
| BseBI | CCWGG | 2 cut(s) | 96, 1433 |
| BseDI | CCNNGG | 4 cut(s) | 1432, 1440, 1520, 1572 |
| BseGI | GGATG | 7 cut(s) | 173, 221, 1237, 1276, 1361, 1378, 1530 |
| BseJI | GATNNNNATC | 2 cut(s) | 33, 543 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1088, 1503 |
| BseMI | GCAATG | 1 cut(s) | 736 |
| BseMII | CTCAG | 4 cut(s) | 314, 615, 876, 1643 |
| BseNI | ACTGG | 7 cut(s) | 250, 406, 521, 693, 939, 1099, 1492 |
| BseRI | GAGGAG | 1 cut(s) | 750 |
| BseXI | GCAGC | 5 cut(s) | 70, 359, 868, 1082, 1534 |
| Bsh1236I | CGCG | 1 cut(s) | 978 |
| BsiSI | CCGG | 1 cut(s) | 476 |
| BslFI | GGGAC | 1 cut(s) | 1449 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1088, 1503 |
| BsmAI | GTCTC | 1 cut(s) | 975 |
| BsmBI | CGTCTC | 1 cut(s) | 975 |
| BsmFI | GGGAC | 1 cut(s) | 1449 |
| Bsp13I | TCCGGA | 1 cut(s) | 475 |
| Bsp1407I | TGTACA | 1 cut(s) | 427 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 102, 885 |
| BspACI | CCGC | 5 cut(s) | 171, 520, 978, 1112, 1756 |
| BspCNI | CTCAG | 4 cut(s) | 313, 616, 877, 1644 |
| BspEI | TCCGGA | 1 cut(s) | 475 |
| BspFNI | CGCG | 1 cut(s) | 978 |
| BspHI | TCATGA | 1 cut(s) | 183 |
| BspLI | GGNNCC | 6 cut(s) | 175, 546, 1284, 1437, 1438, 1508 |
| BspMAI | CTGCAG | 1 cut(s) | 1247 |
| BspMI | ACCTGC | 2 cut(s) | 697, 1474 |
| BspOI | GCTAGC | 1 cut(s) | 1119 |
| BspPI | GGATC | 5 cut(s) | 539, 552, 624, 1277, 1290 |
| BsrDI | GCAATG | 1 cut(s) | 736 |
| BsrGI | TGTACA | 1 cut(s) | 427 |
| BsrI | ACTGG | 7 cut(s) | 250, 406, 521, 693, 939, 1099, 1492 |
| BssECI | CCNNGG | 4 cut(s) | 1432, 1440, 1520, 1572 |
| BssT1I | CCWWGG | 3 cut(s) | 1440, 1520, 1572 |
| Bst2UI | CCWGG | 2 cut(s) | 96, 1433 |
| Bst4CI | ACNGT | 6 cut(s) | 725, 833, 841, 1233, 1461, 1663 |
| BstAUI | TGTACA | 1 cut(s) | 427 |
| BstC8I | GCNNGC | 4 cut(s) | 927, 1008, 1117, 1756 |
| BstDEI | CTNAG | 7 cut(s) | 102, 300, 550, 624, 885, 1652, 1725 |
| BstF5I | GGATG | 7 cut(s) | 173, 221, 1237, 1276, 1361, 1378, 1530 |
| BstFNI | CGCG | 1 cut(s) | 978 |
| BstMAI | GTCTC | 1 cut(s) | 975 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 148, 1007, 1553 |
| BstNI | CCWGG | 2 cut(s) | 96, 1433 |
| BstNSI | RCATGY | 1 cut(s) | 1177 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1427 |
| BstSCI | CCNGG | 2 cut(s) | 94, 1431 |
| BstSFI | CTRYAG | 1 cut(s) | 1243 |
| BstUI | CGCG | 1 cut(s) | 978 |
| BstV1I | GCAGC | 5 cut(s) | 70, 359, 868, 1082, 1534 |
| BstX2I | RGATCY | 3 cut(s) | 328, 544, 1282 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1579 |
| BstYI | RGATCY | 3 cut(s) | 328, 544, 1282 |
| Bsu36I | CCTNAGG | 1 cut(s) | 300 |
| BtsCI | GGATG | 7 cut(s) | 173, 221, 1237, 1276, 1361, 1378, 1530 |
| BtsIMutI | CAGTG | 1 cut(s) | 1759 |
| BveI | ACCTGC | 2 cut(s) | 697, 1474 |
| Cac8I | GCNNGC | 4 cut(s) | 927, 1008, 1117, 1756 |
| CaiI | CAGNNNCTG | 2 cut(s) | 262, 307 |
| CciI | TCATGA | 1 cut(s) | 183 |
| Cfr13I | GGNCC | 3 cut(s) | 743, 1436, 1506 |
| CseI | GACGC | 2 cut(s) | 248, 992 |
| Csp6I | GTAC | 4 cut(s) | 428, 992, 1092, 1166 |
| CviAII | CATG | 5 cut(s) | 184, 200, 524, 1174, 1403 |
| CviQI | GTAC | 4 cut(s) | 428, 992, 1092, 1166 |
| DdeI | CTNAG | 7 cut(s) | 102, 300, 550, 624, 885, 1652, 1725 |
| DraI | TTTAAA | 2 cut(s) | 859, 1720 |
| Eco130I | CCWWGG | 3 cut(s) | 1440, 1520, 1572 |
| Eco47I | GGWCC | 3 cut(s) | 743, 1436, 1506 |
| Eco57I | CTGAAG | 2 cut(s) | 317, 1392 |
| Eco81I | CCTNAGG | 1 cut(s) | 300 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1436, 1506 |
| EcoRII | CCWGG | 2 cut(s) | 94, 1431 |
| EcoT14I | CCWWGG | 3 cut(s) | 1440, 1520, 1572 |
| ErhI | CCWWGG | 3 cut(s) | 1440, 1520, 1572 |
| Esp3I | CGTCTC | 1 cut(s) | 975 |
| FaeI | CATG | 5 cut(s) | 187, 203, 527, 1177, 1406 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 116, 148, 1011, 1043, 1700, 1732 |
| FaqI | GGGAC | 1 cut(s) | 1449 |
| FatI | CATG | 5 cut(s) | 183, 199, 523, 1173, 1402 |
| FauNDI | CATATG | 1 cut(s) | 399 |
| FbaI | TGATCA | 2 cut(s) | 373, 679 |
| FblI | GTMKAC | 1 cut(s) | 1685 |
| Fnu4HI | GCNGC | 7 cut(s) | 84, 348, 521, 882, 1071, 1113, 1548 |
| FokI | GGATG | 7 cut(s) | 180, 208, 1224, 1283, 1348, 1365, 1537 |
| Fsp4HI | GCNGC | 7 cut(s) | 84, 348, 521, 882, 1071, 1113, 1548 |
| FspBI | CTAG | 5 cut(s) | 386, 639, 798, 1067, 1116 |
| GluI | GCNGC | 7 cut(s) | 84, 348, 521, 882, 1071, 1113, 1548 |
| GsuI | CTGGAG | 1 cut(s) | 117 |
| HapII | CCGG | 1 cut(s) | 476 |
| HgaI | GACGC | 2 cut(s) | 248, 992 |
| Hin1II | CATG | 5 cut(s) | 187, 203, 527, 1177, 1406 |
| HincII | GTYRAC | 3 cut(s) | 313, 556, 1659 |
| HindII | GTYRAC | 3 cut(s) | 313, 556, 1659 |
| HinfI | GANTC | 4 cut(s) | 194, 362, 635, 647 |
| HpaII | CCGG | 1 cut(s) | 476 |
| HphI | GGTGA | 4 cut(s) | 383, 1208, 1455, 1509 |
| Hpy166II | GTNNAC | 7 cut(s) | 313, 428, 556, 746, 1064, 1659, 1686 |
| Hpy188I | TCNGA | 5 cut(s) | 146, 264, 336, 675, 921 |
| Hpy8I | GTNNAC | 7 cut(s) | 313, 428, 556, 746, 1064, 1659, 1686 |
| Hpy99I | CGWCG | 2 cut(s) | 42, 494 |
| HpyAV | CCTTC | 3 cut(s) | 147, 625, 1367 |
| HpyCH4III | ACNGT | 6 cut(s) | 725, 833, 841, 1233, 1461, 1663 |
| HpyCH4IV | ACGT | 1 cut(s) | 1428 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 148, 1007, 1553 |
| HpyF3I | CTNAG | 7 cut(s) | 102, 300, 550, 624, 885, 1652, 1725 |
| HpySE526I | ACGT | 1 cut(s) | 1428 |
| Hsp92II | CATG | 5 cut(s) | 187, 203, 527, 1177, 1406 |
| KflI | GGGWCCC | 1 cut(s) | 1436 |
| Kpn2I | TCCGGA | 1 cut(s) | 475 |
| Ksp22I | TGATCA | 2 cut(s) | 373, 679 |
| LmnI | GCTCC | 2 cut(s) | 98, 147 |
| Lsp1109I | GCAGC | 5 cut(s) | 70, 359, 868, 1082, 1534 |
| LweI | GCATC | 7 cut(s) | 115, 158, 598, 868, 896, 912, 1515 |
| MaeI | CTAG | 5 cut(s) | 386, 639, 798, 1067, 1116 |
| MaeII | ACGT | 1 cut(s) | 1428 |
| MaeIII | GTNAC | 3 cut(s) | 1209, 1417, 1461 |
| MboII | GAAGA | 5 cut(s) | 323, 509, 770, 1005, 1633 |
| MfeI | CAATTG | 1 cut(s) | 1470 |
| MflI | RGATCY | 3 cut(s) | 328, 544, 1282 |
| MlyI | GAGTC | 2 cut(s) | 371, 656 |
| MmeI | TCCRAC | 2 cut(s) | 1149, 1645 |
| MnlI | CCTC | 9 cut(s) | 104, 309, 728, 731, 760, 1578, 1627, 1647, 1674 |
| MroI | TCCGGA | 1 cut(s) | 475 |
| MseI | TTAA | 6 cut(s) | 582, 858, 1040, 1077, 1590, 1719 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1383 |
| MspA1I | CMGCKG | 1 cut(s) | 1112 |
| MspI | CCGG | 1 cut(s) | 476 |
| MspR9I | CCNGG | 2 cut(s) | 96, 1433 |
| MunI | CAATTG | 1 cut(s) | 1470 |
| MvaI | CCWGG | 2 cut(s) | 96, 1433 |
| MvnI | CGCG | 1 cut(s) | 978 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 148, 1007, 1553 |
| NdeI | CATATG | 1 cut(s) | 399 |
| NheI | GCTAGC | 1 cut(s) | 1115 |
| NlaIII | CATG | 5 cut(s) | 187, 203, 527, 1177, 1406 |
| NlaIV | GGNNCC | 6 cut(s) | 175, 546, 1284, 1437, 1438, 1508 |
| NmuCI | GTSAC | 1 cut(s) | 1461 |
| NspI | RCATGY | 1 cut(s) | 1177 |
| PagI | TCATGA | 1 cut(s) | 183 |
| PaqCI | CACCTGC | 1 cut(s) | 1474 |
| PciI | ACATGT | 1 cut(s) | 1173 |
| PfeI | GAWTC | 2 cut(s) | 194, 635 |
| PfoI | TCCNGGA | 1 cut(s) | 94 |
| PkrI | GCNGC | 7 cut(s) | 85, 349, 522, 883, 1072, 1114, 1549 |
| PleI | GAGTC | 2 cut(s) | 370, 655 |
| PpsI | GAGTC | 2 cut(s) | 370, 655 |
| PpuMI | RGGWCCY | 2 cut(s) | 1436, 1506 |
| PscI | ACATGT | 1 cut(s) | 1173 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1427 |
| PshBI | ATTAAT | 1 cut(s) | 1040 |
| Psp5II | RGGWCCY | 2 cut(s) | 1436, 1506 |
| Psp6I | CCWGG | 2 cut(s) | 94, 1431 |
| PspGI | CCWGG | 2 cut(s) | 94, 1431 |
| PspN4I | GGNNCC | 6 cut(s) | 175, 546, 1284, 1437, 1438, 1508 |
| PspPI | GGNCC | 3 cut(s) | 743, 1436, 1506 |
| PspPPI | RGGWCCY | 2 cut(s) | 1436, 1506 |
| PstI | CTGCAG | 1 cut(s) | 1247 |
| PstNI | CAGNNNCTG | 2 cut(s) | 262, 307 |
| PsuI | RGATCY | 3 cut(s) | 328, 544, 1282 |
| RsaI | GTAC | 4 cut(s) | 429, 993, 1093, 1167 |
| RsaNI | GTAC | 4 cut(s) | 428, 992, 1092, 1166 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1383 |
| SaqAI | TTAA | 6 cut(s) | 582, 858, 1040, 1077, 1590, 1719 |
| SatI | GCNGC | 7 cut(s) | 84, 348, 521, 882, 1071, 1113, 1548 |
| Sau96I | GGNCC | 3 cut(s) | 743, 1436, 1506 |
| SchI | GAGTC | 2 cut(s) | 371, 656 |
| ScrFI | CCNGG | 2 cut(s) | 96, 1433 |
| SfaNI | GCATC | 7 cut(s) | 115, 158, 598, 868, 896, 912, 1515 |
| SfcI | CTRYAG | 1 cut(s) | 1243 |
| SinI | GGWCC | 3 cut(s) | 743, 1436, 1506 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1383 |
| SmlI | CTYRAG | 3 cut(s) | 133, 415, 910 |
| SmoI | CTYRAG | 3 cut(s) | 133, 415, 910 |
| SsiI | CCGC | 5 cut(s) | 171, 520, 978, 1112, 1756 |
| SspMI | CTAG | 5 cut(s) | 386, 639, 798, 1067, 1116 |
| StyD4I | CCNGG | 2 cut(s) | 94, 1431 |
| StyI | CCWWGG | 3 cut(s) | 1440, 1520, 1572 |
| TaaI | ACNGT | 6 cut(s) | 725, 833, 841, 1233, 1461, 1663 |
| TaiI | ACGT | 1 cut(s) | 1431 |
| TaqI | TCGA | 5 cut(s) | 37, 109, 931, 945, 1031 |
| TaqII | GACCGA | 1 cut(s) | 66 |
| TatI | WGTACW | 1 cut(s) | 427 |
| TauI | GCSGC | 2 cut(s) | 523, 1115 |
| TfiI | GAWTC | 2 cut(s) | 194, 635 |
| Tru1I | TTAA | 6 cut(s) | 582, 858, 1040, 1077, 1590, 1719 |
| Tru9I | TTAA | 6 cut(s) | 582, 858, 1040, 1077, 1590, 1719 |
| TseFI | GTSAC | 1 cut(s) | 1461 |
| TseI | GCWGC | 5 cut(s) | 83, 347, 881, 1070, 1547 |
| Tsp45I | GTSAC | 1 cut(s) | 1461 |
| TspDTI | ATGAA | 9 cut(s) | 210, 510, 771, 881, 1091, 1170, 1226, 1325, 1586 |
| TspGWI | ACGGA | 1 cut(s) | 1709 |
| VpaK11BI | GGWCC | 3 cut(s) | 743, 1436, 1506 |
| VspI | ATTAAT | 1 cut(s) | 1040 |
| XapI | RAATTY | 7 cut(s) | 232, 480, 669, 790, 1337, 1563, 1637 |
| XceI | RCATGY | 1 cut(s) | 1177 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 513 |
| XmiI | GTMKAC | 1 cut(s) | 1685 |
| XspI | CTAG | 5 cut(s) | 386, 639, 798, 1067, 1116 |