No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom17g02830 |
| rosa_chinensis | RchiOBHm_Chr4g0442241 RchiOBHm_Chr5g0056781 RchiOBHm_Chr5g0073021 |
| rosa_laevigata | RLG00000003772 RLG00000011061 RLG00000013117 RLG00000015920 RLG00000017682 RLG00000036400 |
| rosa_multiflora | Rmu_sc0005220.1_g000044 Rmu_sc0010369.1_g000010 Rmu_sc0019790.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00371710 Rroxscaffold_5G00371720 Rroxscaffold_7G00178540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 84 |
| AcsI | RAATTY | 1 cut(s) | 339 |
| AcyI | GRCGYC | 1 cut(s) | 66 |
| AgsI | TTSAA | 3 cut(s) | 50, 152, 230 |
| AjiI | CACGTC | 1 cut(s) | 109 |
| AluBI | AGCT | 3 cut(s) | 30, 99, 366 |
| AluI | AGCT | 3 cut(s) | 30, 99, 366 |
| Alw26I | GTCTC | 2 cut(s) | 154, 168 |
| ApoI | RAATTY | 1 cut(s) | 339 |
| AspS9I | GGNCC | 1 cut(s) | 86 |
| AsuHPI | GGTGA | 2 cut(s) | 229, 371 |
| AsuII | TTCGAA | 1 cut(s) | 200 |
| AvaII | GGWCC | 1 cut(s) | 86 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 254, 286 |
| BbsI | GAAGAC | 1 cut(s) | 159 |
| BccI | CCATC | 2 cut(s) | 286, 291 |
| BceAI | ACGGC | 1 cut(s) | 91 |
| BcoDI | GTCTC | 2 cut(s) | 154, 168 |
| Bme18I | GGWCC | 1 cut(s) | 86 |
| BmgBI | CACGTC | 1 cut(s) | 109 |
| BmgT120I | GGNCC | 1 cut(s) | 86 |
| BmsI | GCATC | 1 cut(s) | 8 |
| BpiI | GAAGAC | 1 cut(s) | 159 |
| Bpu14I | TTCGAA | 1 cut(s) | 200 |
| BsaHI | GRCGYC | 1 cut(s) | 66 |
| BsaJI | CCNNGG | 1 cut(s) | 35 |
| BsaWI | WCCGGW | 2 cut(s) | 58, 156 |
| BseDI | CCNNGG | 1 cut(s) | 35 |
| BseGI | GGATG | 3 cut(s) | 123, 297, 302 |
| BseMII | CTCAG | 1 cut(s) | 5 |
| BsiSI | CCGG | 2 cut(s) | 59, 157 |
| BsmAI | GTCTC | 2 cut(s) | 154, 168 |
| BsmBI | CGTCTC | 1 cut(s) | 168 |
| Bsp119I | TTCGAA | 1 cut(s) | 200 |
| BspACI | CCGC | 1 cut(s) | 84 |
| BspCNI | CTCAG | 1 cut(s) | 6 |
| BspT104I | TTCGAA | 1 cut(s) | 200 |
| BssECI | CCNNGG | 1 cut(s) | 35 |
| BssNI | GRCGYC | 1 cut(s) | 66 |
| Bst6I | CTCTTC | 2 cut(s) | 225, 246 |
| BstACI | GRCGYC | 1 cut(s) | 66 |
| BstBI | TTCGAA | 1 cut(s) | 200 |
| BstC8I | GCNNGC | 2 cut(s) | 32, 70 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 3 cut(s) | 123, 297, 302 |
| BstMAI | GTCTC | 2 cut(s) | 154, 168 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 10, 27 |
| BstV2I | GAAGAC | 1 cut(s) | 159 |
| BtrI | CACGTC | 1 cut(s) | 109 |
| BtsCI | GGATG | 3 cut(s) | 123, 297, 302 |
| Cac8I | GCNNGC | 2 cut(s) | 32, 70 |
| Cfr13I | GGNCC | 1 cut(s) | 86 |
| CseI | GACGC | 2 cut(s) | 10, 74 |
| CviAII | CATG | 1 cut(s) | 334 |
| CviJI | RGCY | 5 cut(s) | 30, 78, 99, 319, 366 |
| CviKI_1 | RGCY | 5 cut(s) | 30, 78, 99, 319, 366 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| Eam1104I | CTCTTC | 2 cut(s) | 225, 246 |
| EarI | CTCTTC | 2 cut(s) | 225, 246 |
| Eco47I | GGWCC | 1 cut(s) | 86 |
| Esp3I | CGTCTC | 1 cut(s) | 168 |
| FaeI | CATG | 1 cut(s) | 337 |
| FaiI | YATR | 3 cut(s) | 91, 335, 369 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 303, 335 |
| FatI | CATG | 1 cut(s) | 333 |
| FokI | GGATG | 3 cut(s) | 130, 304, 309 |
| HapII | CCGG | 2 cut(s) | 59, 157 |
| HgaI | GACGC | 2 cut(s) | 10, 74 |
| Hin1I | GRCGYC | 1 cut(s) | 66 |
| Hin1II | CATG | 1 cut(s) | 337 |
| HincII | GTYRAC | 2 cut(s) | 25, 64 |
| HindII | GTYRAC | 2 cut(s) | 25, 64 |
| HinfI | GANTC | 2 cut(s) | 166, 233 |
| HpaII | CCGG | 2 cut(s) | 59, 157 |
| HphI | GGTGA | 2 cut(s) | 229, 371 |
| Hpy166II | GTNNAC | 3 cut(s) | 25, 64, 353 |
| Hpy188I | TCNGA | 2 cut(s) | 39, 130 |
| Hpy188III | TCNNGA | 2 cut(s) | 306, 323 |
| Hpy8I | GTNNAC | 3 cut(s) | 25, 64, 353 |
| Hpy99I | CGWCG | 1 cut(s) | 77 |
| HpyAV | CCTTC | 3 cut(s) | 196, 259, 273 |
| HpyCH4IV | ACGT | 1 cut(s) | 108 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 10, 27 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| HpySE526I | ACGT | 1 cut(s) | 108 |
| Hsp92I | GRCGYC | 1 cut(s) | 66 |
| Hsp92II | CATG | 1 cut(s) | 337 |
| LpnPI | CCDG | 5 cut(s) | 72, 82, 170, 291, 308 |
| LweI | GCATC | 1 cut(s) | 8 |
| MaeII | ACGT | 1 cut(s) | 108 |
| MboII | GAAGA | 9 cut(s) | 164, 232, 242, 257, 260, 263, 268, 271, 274 |
| MluCI | AATT | 2 cut(s) | 225, 339 |
| MlyI | GAGTC | 1 cut(s) | 242 |
| MnlI | CCTC | 8 cut(s) | 45, 108, 114, 178, 276, 282, 309, 350 |
| MspA1I | CMGCKG | 1 cut(s) | 99 |
| MspI | CCGG | 2 cut(s) | 59, 157 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 10, 27 |
| NlaIII | CATG | 1 cut(s) | 337 |
| NspV | TTCGAA | 1 cut(s) | 200 |
| PfeI | GAWTC | 1 cut(s) | 166 |
| PleI | GAGTC | 1 cut(s) | 241 |
| PpsI | GAGTC | 1 cut(s) | 241 |
| PspPI | GGNCC | 1 cut(s) | 86 |
| PvuII | CAGCTG | 1 cut(s) | 99 |
| Sau96I | GGNCC | 1 cut(s) | 86 |
| SchI | GAGTC | 1 cut(s) | 242 |
| SetI | ASST | 6 cut(s) | 32, 101, 111, 125, 361, 368 |
| SfaNI | GCATC | 1 cut(s) | 8 |
| SfuI | TTCGAA | 1 cut(s) | 200 |
| SinI | GGWCC | 1 cut(s) | 86 |
| Sse9I | AATT | 2 cut(s) | 225, 339 |
| SsiI | CCGC | 1 cut(s) | 84 |
| TaiI | ACGT | 1 cut(s) | 111 |
| TaqI | TCGA | 3 cut(s) | 193, 200, 277 |
| TasI | AATT | 2 cut(s) | 225, 339 |
| TfiI | GAWTC | 1 cut(s) | 166 |
| VpaK11BI | GGWCC | 1 cut(s) | 86 |
| XapI | RAATTY | 1 cut(s) | 339 |