RLG00000003918

Domain of unknown function (DUF3527)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0006314
Physical Location & Seq
Forward (+)
54280080 .. 54282447
2368 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003918

Sequence Viewer

Length: 2169 bp
ATGGAGTTCGAGAAAAATTGCAGAGTGGGTCTGAGTCCCAACACTGTTCTTCCAACTCATCGGCATTCCTGTGTTGAAAAGAGAAGCACAAAAGGTAGACCGCCACGCAAAGATGATCTATTGAGCATCAAGGAGGGGTTTGTGGAAATCAGCTTTCAGCGCTATCGCAGCACTTCTTGTAAGGTACCATCTAGACCTGTCGGACAGGAAGTTAACATAGAACTTAAGCGAGGTTCTATATATCAAAGCTCCAAGGAGGTTAGGGAAATTAAGAAAATGGGCACTGCTGAGGGAAGGAGAAAGATTGAAAAGTCACGATGTAGTGACTCCTCTTTCTCTTACAGAATTGTGGATTCATTGCGTAGTTCAGGTGATGAAACCCCACAGAATAGGTCTTCCGTACTGTCTTTGAAACCAGAACTGAATGTACCATCTGCTGGAAGGCCTCATGTAGAGCCGTGTTCATTGGATAGCATTCTTGAAATTTGTGTGGATCCAGATGACAGGGAAGAGCACTCAGCTGAAGCTTTAGGAGAAGATCCAATGCATTTGAATCTAAGAAGTGATCCGGTTGCTGGACCTCTAAACAACGGAAATGAACTTCTTGAAAGAGATGAAGTTCACAAATTGCACAAGTCATTCTCTGCTAAGGTGGAAATGCTTCATACTCCTTCTCCATCGGAGAGTGATCGCTCGTCCAGTGTGAGCTCAAAGGCCCGGTTCAACAATTTAAGAAAAATGTTTGATCCATTCATGAAGTCCAAGTCATTGCGAAGTCCAAGTTATGTTGTGGAACCTGGGGGAGCCAAAACAACTGGAATGGTGGACATGACAAAAAGCAGGACATATCAAAAATCTTTGTTGCCTGTCTTTTCAAATACGGTACAGAATGCAGGTTGTGATTCATTGTGTATCAACCAAGATAACCACCAGTCTAGTGTAGCATCTTCACCGGTTCACCTACATGGCCATCTTAAATTACAAAATAAACATGGAATGCCATTTTTTGAGTTCTCGTTGAAGGGATCAGAAGACGTCTTTGTGGCCAGGACATGGAAAGCGGATAATGGTTTTAACTGGGTGTATACCTTTCATGCCGTTGGTGGTAGAAAGAAGAGCAATGCCAGCGGTGTGGGATTGCATGGTAGCGATAGAGATTCTTCAATGGTGGGACAGATGCAAGTTTCTTGTTATCTATGTTCAGAACTAAGAGATGGAACTTTTGACAATTCCATGGTGACAGAGTTTGTTTTGTATGATATCTCTCATGCAAGGCAAATTGCAGCAGAAAAAGCAAACTCTAATTGTACCCTTGATGATGCTAAACATCCCAAAGGTTCCAATCAGAGCACGGAGGGTGCAACTTTAAAGTTGGGCGATGGGTCTTGTCCAACGAAAGTCAAATCTCAACACAAGAGCAGTGATTCCAATTCTTCAGCCTGGCCATTTGCAGCTCTGCATCCAGGTCTTGAAATTGCAGCCATTGTTATGCAAGTTCCATTTGAAAAGAGAGAGAGCTTGAAATACAAGAGAGGGGATACGGTATGTGATAAAGTACCTGCAAACCTACTTAAGCTGTCCATGGTTGAACAGAAGAAGAAGGATGACCCTGATAATCGAAACTCAGGAAACTTGAAGGTGATAATTCCATCTGGAAATCATGGTTTTCCGGTTGCTGAAAGCAAGGGTCCTTCGTCGTTACTAGATCGATGGAGGTTGGGTGGTGGTTGTGACTGTGGCGGCTGGGACATGTCCTGTCCTCTTACCGTGTTAAGCAATCCCAACATTCAGTTAGCTGATAATCAATTATTTGAAGAGAATCAGCAGCCTCTGGAACTTTTTGTTCAGGGATCAAAGGAGAAAAAACCAGCATTGACCATGACAATGGTTGAAGATGGACAGTATGCAGTGGATTTTCATGCACAGTTGTTGACATTACAAGCATTCTCTATGTGTGTTTCTATTCTGCATGGTACAGAAACATCGACAGCAGCCACTGGGCAGGAGGAAAGCAAACAGTGCAATTCATTGAAAGTGCTTAAAGAGGAAGTGAAGTTCTTAATTGAAGCAGTCACAGAAGGGGAGAAGAAGAAAGTAGCTAAGAGGGTGAAAAAGATCCAACCATCTTATGTGCTCGATCCACCCTTCTCTCCTATTGCACGAGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH DUF3527 TFIIS_M

Protein Analysis

723

Amino Acids

79.74

Weight (kDa)

8.47

Isoelectric Point (pI)

51.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3527 PF12043 318 - 658 1.7e-108 Domain of unknown function (DUF3527)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1038
Acc36I ACCTGC 2 cut(s) 884, 1567
Acc65I GGTACC 1 cut(s) 184
AccB1I GGYRCC 1 cut(s) 184
AccB7I CCANNNNNTGG 2 cut(s) 437, 1053
AccI GTMKAC 2 cut(s) 97, 1085
AciI CCGC 4 cut(s) 101, 1061, 1128, 1740
AclWI GGATC 9 cut(s) 488, 501, 533, 560, 740, 1033, 1858, 2110, 2132
AcoI YGGCCR 3 cut(s) 967, 1044, 1442
AcsI RAATTY 1 cut(s) 483
AcuI CTGAAG 2 cut(s) 543, 1419
AcyI GRCGYC 1 cut(s) 1035
AfaI GTAC 7 cut(s) 186, 402, 429, 885, 1309, 1557, 1975
AfeI AGCGCT 1 cut(s) 161
AfiI CCNNNNNNNGG 3 cut(s) 437, 575, 1053
AflII CTTAAG 2 cut(s) 224, 1571
AflIII ACRYGT 1 cut(s) 1749
AgeI ACCGGT 1 cut(s) 952
AjnI CCWGG 4 cut(s) 796, 1046, 1439, 1462
AloI GAACNNNNNNTCC 2 cut(s) 2039, 2071
Alw21I GWGCWC 4 cut(s) 516, 710, 1352, 2136
AlwI GGATC 9 cut(s) 488, 501, 533, 560, 740, 1033, 1858, 2110, 2132
AlwNI CAGNNNCTG 2 cut(s) 1831, 1997
Aor51HI AGCGCT 1 cut(s) 161
AoxI GGCC 5 cut(s) 443, 714, 967, 1044, 1442
ApeKI GCWGC 6 cut(s) 168, 1283, 1451, 1478, 1825, 1991
ApoI RAATTY 1 cut(s) 483
AsiGI ACCGGT 1 cut(s) 952
Asp700I GAANNNNTTC 1 cut(s) 660
Asp718I GGTACC 1 cut(s) 184
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 3 cut(s) 578, 715, 1688
AsuC2I CCSGG 1 cut(s) 718
AsuHPI GGTGA 6 cut(s) 383, 942, 950, 1249, 1651, 2119
AvaII GGWCC 2 cut(s) 578, 1688
BaeGI GKGCMC 1 cut(s) 284
BalI TGGCCA 3 cut(s) 969, 1046, 1444
BamHI GGATCC 1 cut(s) 493
BanI GGYRCC 1 cut(s) 184
BanII GRGCYC 1 cut(s) 710
BauI CACGAG 1 cut(s) 2160
BbsI GAAGAC 2 cut(s) 387, 1038
Bbv12I GWGCWC 4 cut(s) 516, 710, 1352, 2136
BbvCI CCTCAGC 1 cut(s) 288
BbvI GCAGC 6 cut(s) 180, 1295, 1463, 1490, 1837, 2003
BceAI ACGGC 2 cut(s) 442, 1082
BciT130I CCWGG 4 cut(s) 798, 1048, 1441, 1464
BciVI GTATCC 1 cut(s) 1531
BcnI CCSGG 1 cut(s) 718
BfaI CTAG 3 cut(s) 192, 936, 1703
BfoI RGCGCY 1 cut(s) 163
BfrI CTTAAG 2 cut(s) 224, 1571
BfuAI ACCTGC 2 cut(s) 884, 1567
BfuI GTATCC 1 cut(s) 1531
BisI GCNGC 7 cut(s) 169, 1284, 1452, 1479, 1741, 1826, 1992
BlsI GCNGC 7 cut(s) 170, 1285, 1453, 1480, 1742, 1827, 1993
Bme1390I CCNGG 5 cut(s) 718, 798, 1048, 1441, 1464
Bme18I GGWCC 2 cut(s) 578, 1688
BmgT120I GGNCC 3 cut(s) 578, 715, 1688
BmiI GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1689
BmrFI CCNGG 5 cut(s) 718, 798, 1048, 1441, 1464
BmrI ACTGGG 2 cut(s) 1087, 2007
BmsI GCATC 5 cut(s) 135, 953, 1167, 1309, 1468
BmuI ACTGGG 2 cut(s) 1087, 2007
BpiI GAAGAC 2 cut(s) 387, 1038
Bpu10I CCTNAGC 2 cut(s) 288, 648
BpuMI CCSGG 1 cut(s) 718
Bsa29I ATCGAT 1 cut(s) 1708
BsaHI GRCGYC 1 cut(s) 1035
BsaJI CCNNGG 4 cut(s) 252, 797, 1233, 1581
BsaWI WCCGGW 3 cut(s) 568, 952, 1669
BsaXI ACNNNNNCTCC 4 cut(s) 658, 688, 1705, 1735
Bsc4I CCNNNNNNNGG 3 cut(s) 437, 575, 1053
Bse118I RCCGGY 1 cut(s) 952
Bse1I ACTGG 5 cut(s) 699, 820, 931, 1082, 2002
Bse3DI GCAATG 3 cut(s) 356, 767, 1126
BseBI CCWGG 4 cut(s) 798, 1048, 1441, 1464
BseCI ATCGAT 1 cut(s) 1708
BseDI CCNNGG 4 cut(s) 252, 797, 1233, 1581
BseGI GGATG 3 cut(s) 1327, 1459, 1609
BseLI CCNNNNNNNGG 3 cut(s) 437, 575, 1053
BseMI GCAATG 3 cut(s) 356, 767, 1126
BseMII CTCAG 4 cut(s) 23, 279, 531, 1638
BseNI ACTGG 5 cut(s) 699, 820, 931, 1082, 2002
BseRI GAGGAG 1 cut(s) 319
BseSI GKGCMC 1 cut(s) 284
BseXI GCAGC 6 cut(s) 180, 1295, 1463, 1490, 1837, 2003
BseYI CCCAGC 1 cut(s) 1743
BshFI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
BshNI GGYRCC 1 cut(s) 184
BshTI ACCGGT 1 cut(s) 952
BshVI ATCGAT 1 cut(s) 1708
BsiHKAI GWGCWC 4 cut(s) 516, 710, 1352, 2136
BsiSI CCGG 4 cut(s) 569, 718, 953, 1670
BslFI GGGAC 3 cut(s) 21, 1185, 1760
BslI CCNNNNNNNGG 3 cut(s) 437, 575, 1053
BsmFI GGGAC 3 cut(s) 21, 1185, 1760
BsmI GAATGC 5 cut(s) 64, 474, 895, 1002, 1943
BsnI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
Bsp1286I GDGCHC 5 cut(s) 284, 516, 710, 1352, 2136
Bsp19I CCATGG 2 cut(s) 1233, 1581
BspACI CCGC 4 cut(s) 101, 1061, 1128, 1740
BspANI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
BspCNI CTCAG 4 cut(s) 24, 280, 530, 1637
BspDI ATCGAT 1 cut(s) 1708
BspHI TCATGA 1 cut(s) 753
BspLI GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1689
BspMI ACCTGC 2 cut(s) 884, 1567
BspPI GGATC 9 cut(s) 488, 501, 533, 560, 740, 1033, 1858, 2110, 2132
BspQI GCTCTTC 2 cut(s) 504, 1109
BspT107I GGYRCC 1 cut(s) 184
BspTI CTTAAG 2 cut(s) 224, 1571
BsrDI GCAATG 3 cut(s) 356, 767, 1126
BsrFI RCCGGY 1 cut(s) 952
BsrI ACTGG 5 cut(s) 699, 820, 931, 1082, 2002
BssAI RCCGGY 1 cut(s) 952
BssECI CCNNGG 4 cut(s) 252, 797, 1233, 1581
BssNAI GTATAC 1 cut(s) 1086
BssNI GRCGYC 1 cut(s) 1035
BssSI CACGAG 1 cut(s) 2160
BssT1I CCWWGG 3 cut(s) 252, 1233, 1581
Bst1107I GTATAC 1 cut(s) 1086
Bst2BI CACGAG 1 cut(s) 2160
Bst2UI CCWGG 4 cut(s) 798, 1048, 1441, 1464
Bst4CI ACNGT 9 cut(s) 46, 405, 883, 1543, 1736, 1768, 1902, 1926, 2019
Bst6I CTCTTC 3 cut(s) 504, 1109, 1809
BstACI GRCGYC 1 cut(s) 1035
BstAFI CTTAAG 2 cut(s) 224, 1571
BstAPI GCANNNNNTGC 1 cut(s) 2019
BstC8I GCNNGC 1 cut(s) 1126
BstDEI CTNAG 8 cut(s) 32, 288, 517, 557, 648, 1208, 1624, 2100
BstDSI CCRYGG 2 cut(s) 1233, 1581
BstF5I GGATG 3 cut(s) 1327, 1459, 1609
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 1 cut(s) 162
BstMWI GCNNNNNNNGC 5 cut(s) 159, 168, 1125, 1292, 2019
BstNI CCWGG 4 cut(s) 798, 1048, 1441, 1464
BstNSI RCATGY 1 cut(s) 1753
BstSCI CCNGG 5 cut(s) 716, 796, 1046, 1439, 1462
BstSLI GKGCMC 1 cut(s) 284
BstV1I GCAGC 6 cut(s) 180, 1295, 1463, 1490, 1837, 2003
BstV2I GAAGAC 2 cut(s) 387, 1038
BstX2I RGATCY 3 cut(s) 493, 538, 2115
BstXI CCANNNNNNTGG 2 cut(s) 1132, 1885
BstYI RGATCY 3 cut(s) 493, 538, 2115
BstZ17I GTATAC 1 cut(s) 1086
Bsu15I ATCGAT 1 cut(s) 1708
BsuI GTATCC 1 cut(s) 1531
BsuRI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
BsuTUI ATCGAT 1 cut(s) 1708
BtgI CCRYGG 2 cut(s) 1233, 1581
BtgZI GCGATG 1 cut(s) 1392
BtsCI GGATG 3 cut(s) 1327, 1459, 1609
BtsI GCAGTG 3 cut(s) 282, 1426, 1914
BtsIMutI CAGTG 7 cut(s) 42, 282, 706, 1426, 1914, 1995, 2024
BveI ACCTGC 2 cut(s) 884, 1567
Cac8I GCNNGC 1 cut(s) 1126
CaiI CAGNNNCTG 2 cut(s) 1831, 1997
CciI TCATGA 1 cut(s) 753
CfoI GCGC 1 cut(s) 162
Cfr10I RCCGGY 1 cut(s) 952
Cfr13I GGNCC 3 cut(s) 578, 715, 1688
ClaI ATCGAT 1 cut(s) 1708
Csp6I GTAC 7 cut(s) 185, 401, 428, 884, 1308, 1556, 1974
CspAI ACCGGT 1 cut(s) 952
CviQI GTAC 7 cut(s) 185, 401, 428, 884, 1308, 1556, 1974
DdeI CTNAG 8 cut(s) 32, 288, 517, 557, 648, 1208, 1624, 2100
DraI TTTAAA 1 cut(s) 1368
EaeI YGGCCR 3 cut(s) 967, 1044, 1442
Eam1104I CTCTTC 3 cut(s) 504, 1109, 1809
EarI CTCTTC 3 cut(s) 504, 1109, 1809
Ecl136II GAGCTC 1 cut(s) 708
Eco130I CCWWGG 3 cut(s) 252, 1233, 1581
Eco147I AGGCCT 1 cut(s) 445
Eco24I GRGCYC 1 cut(s) 710
Eco32I GATATC 1 cut(s) 1261
Eco47I GGWCC 2 cut(s) 578, 1688
Eco47III AGCGCT 1 cut(s) 161
Eco53kI GAGCTC 1 cut(s) 708
Eco57I CTGAAG 2 cut(s) 543, 1419
EcoICRI GAGCTC 1 cut(s) 708
EcoO109I RGGNCCY 1 cut(s) 1688
EcoRII CCWGG 4 cut(s) 796, 1046, 1439, 1462
EcoRV GATATC 1 cut(s) 1261
EcoT14I CCWWGG 3 cut(s) 252, 1233, 1581
EcoT22I ATGCAT 1 cut(s) 549
EcoT38I GRGCYC 1 cut(s) 710
ErhI CCWWGG 3 cut(s) 252, 1233, 1581
FaqI GGGAC 3 cut(s) 21, 1185, 1760
FblI GTMKAC 2 cut(s) 97, 1085
Fnu4HI GCNGC 7 cut(s) 169, 1284, 1452, 1479, 1741, 1826, 1992
FokI GGATG 3 cut(s) 1314, 1446, 1616
FriOI GRGCYC 1 cut(s) 710
Fsp4HI GCNGC 7 cut(s) 169, 1284, 1452, 1479, 1741, 1826, 1992
FspBI CTAG 3 cut(s) 192, 936, 1703
GlaI GCGC 1 cut(s) 161
GluI GCNGC 7 cut(s) 169, 1284, 1452, 1479, 1741, 1826, 1992
GsaI CCCAGC 1 cut(s) 1747
HaeII RGCGCY 1 cut(s) 163
HaeIII GGCC 5 cut(s) 445, 716, 969, 1046, 1444
HapII CCGG 4 cut(s) 569, 718, 953, 1670
HhaI GCGC 1 cut(s) 162
Hin1I GRCGYC 1 cut(s) 1035
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HincII GTYRAC 2 cut(s) 214, 1932
HindII GTYRAC 2 cut(s) 214, 1932
HindIII AAGCTT 1 cut(s) 525
HinfI GANTC 8 cut(s) 34, 326, 353, 553, 902, 1157, 1424, 1819
HpaI GTTAAC 1 cut(s) 214
HpaII CCGG 4 cut(s) 569, 718, 953, 1670
HphI GGTGA 6 cut(s) 383, 942, 950, 1249, 1651, 2119
Hpy166II GTNNAC 7 cut(s) 98, 214, 622, 826, 958, 1086, 1932
Hpy188I TCNGA 6 cut(s) 33, 203, 682, 1030, 1204, 1347
Hpy8I GTNNAC 7 cut(s) 98, 214, 622, 826, 958, 1086, 1932
Hpy99I CGWCG 1 cut(s) 1699
HpyAV CCTTC 9 cut(s) 288, 435, 681, 1015, 1594, 1630, 1701, 2072, 2155
HpyCH4III ACNGT 9 cut(s) 46, 405, 883, 1543, 1736, 1768, 1902, 1926, 2019
HpyCH4IV ACGT 1 cut(s) 1035
HpyF10VI GCNNNNNNNGC 5 cut(s) 159, 168, 1125, 1292, 2019
HpyF3I CTNAG 8 cut(s) 32, 288, 517, 557, 648, 1208, 1624, 2100
HpySE526I ACGT 1 cut(s) 1035
Hsp92I GRCGYC 1 cut(s) 1035
HspAI GCGC 1 cut(s) 160
KpnI GGTACC 1 cut(s) 188
KspAI GTTAAC 1 cut(s) 214
LguI GCTCTTC 2 cut(s) 504, 1109
LmnI GCTCC 2 cut(s) 254, 803
Lsp1109I GCAGC 6 cut(s) 180, 1295, 1463, 1490, 1837, 2003
LweI GCATC 5 cut(s) 135, 953, 1167, 1309, 1468
MaeI CTAG 3 cut(s) 192, 936, 1703
MaeII ACGT 1 cut(s) 1035
MaeIII GTNAC 6 cut(s) 312, 323, 1237, 1698, 1730, 2071
MflI RGATCY 3 cut(s) 493, 538, 2115
MhlI GDGCHC 5 cut(s) 284, 516, 710, 1352, 2136
MlsI TGGCCA 3 cut(s) 969, 1046, 1444
MluNI TGGCCA 3 cut(s) 969, 1046, 1444
MlyI GAGTC 2 cut(s) 43, 320
MmeI TCCRAC 4 cut(s) 77, 181, 1415, 2143
Mox20I TGGCCA 3 cut(s) 969, 1046, 1444
Mph1103I ATGCAT 1 cut(s) 549
MroXI GAANNNNTTC 1 cut(s) 660
MscI TGGCCA 3 cut(s) 969, 1046, 1444
MslI CAYNNNNRTG 4 cut(s) 69, 963, 1487, 1883
Msp20I TGGCCA 3 cut(s) 969, 1046, 1444
MspA1I CMGCKG 2 cut(s) 521, 1128
MspCI CTTAAG 2 cut(s) 224, 1571
MspI CCGG 4 cut(s) 569, 718, 953, 1670
MspR9I CCNGG 5 cut(s) 718, 798, 1048, 1441, 1464
Mva1269I GAATGC 5 cut(s) 64, 474, 895, 1002, 1943
MvaI CCWGG 4 cut(s) 798, 1048, 1441, 1464
MwoI GCNNNNNNNGC 5 cut(s) 159, 168, 1125, 1292, 2019
NciI CCSGG 1 cut(s) 718
NcoI CCATGG 2 cut(s) 1233, 1581
NlaIV GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1689
NmuCI GTSAC 5 cut(s) 312, 323, 1237, 1730, 2071
NsiI ATGCAT 1 cut(s) 549
NspI RCATGY 1 cut(s) 1753
PagI TCATGA 1 cut(s) 753
PceI AGGCCT 1 cut(s) 445
PciI ACATGT 1 cut(s) 1749
PciSI GCTCTTC 2 cut(s) 504, 1109
PctI GAATGC 5 cut(s) 64, 474, 895, 1002, 1943
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 6 cut(s) 353, 553, 902, 1157, 1424, 1819
PflMI CCANNNNNTGG 2 cut(s) 437, 1053
PinAI ACCGGT 1 cut(s) 952
PkrI GCNGC 7 cut(s) 170, 1285, 1453, 1480, 1742, 1827, 1993
PleI GAGTC 2 cut(s) 42, 320
PpsI GAGTC 2 cut(s) 42, 320
PpuMI RGGWCCY 1 cut(s) 1688
PscI ACATGT 1 cut(s) 1749
Psp124BI GAGCTC 1 cut(s) 710
Psp5II RGGWCCY 1 cut(s) 1688
Psp6I CCWGG 4 cut(s) 796, 1046, 1439, 1462
PspFI CCCAGC 1 cut(s) 1743
PspGI CCWGG 4 cut(s) 796, 1046, 1439, 1462
PspN4I GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1689
PspPI GGNCC 3 cut(s) 578, 715, 1688
PspPPI RGGWCCY 1 cut(s) 1688
PsrI GAACNNNNNNTAC 2 cut(s) 411, 443
PstNI CAGNNNCTG 2 cut(s) 1831, 1997
PsuI RGATCY 3 cut(s) 493, 538, 2115
PvuII CAGCTG 1 cut(s) 521
RsaI GTAC 7 cut(s) 186, 402, 429, 885, 1309, 1557, 1975
RsaNI GTAC 7 cut(s) 185, 401, 428, 884, 1308, 1556, 1974
RseI CAYNNNNRTG 4 cut(s) 69, 963, 1487, 1883
SacI GAGCTC 1 cut(s) 710
SapI GCTCTTC 2 cut(s) 504, 1109
SatI GCNGC 7 cut(s) 169, 1284, 1452, 1479, 1741, 1826, 1992
Sau96I GGNCC 3 cut(s) 578, 715, 1688
SchI GAGTC 2 cut(s) 43, 320
ScrFI CCNGG 5 cut(s) 718, 798, 1048, 1441, 1464
SduI GDGCHC 5 cut(s) 284, 516, 710, 1352, 2136
SfaNI GCATC 5 cut(s) 135, 953, 1167, 1309, 1468
SinI GGWCC 2 cut(s) 578, 1688
SmiMI CAYNNNNRTG 4 cut(s) 69, 963, 1487, 1883
SmlI CTYRAG 2 cut(s) 224, 1571
SmoI CTYRAG 2 cut(s) 224, 1571
SseBI AGGCCT 1 cut(s) 445
SsiI CCGC 4 cut(s) 101, 1061, 1128, 1740
SspMI CTAG 3 cut(s) 192, 936, 1703
SstI GAGCTC 1 cut(s) 710
StuI AGGCCT 1 cut(s) 445
StyD4I CCNGG 5 cut(s) 716, 796, 1046, 1439, 1462
StyI CCWWGG 3 cut(s) 252, 1233, 1581
TaaI ACNGT 9 cut(s) 46, 405, 883, 1543, 1736, 1768, 1902, 1926, 2019
TaiI ACGT 1 cut(s) 1038
TaqI TCGA 5 cut(s) 9, 1618, 1708, 1985, 2136
TauI GCSGC 1 cut(s) 1743
TfiI GAWTC 6 cut(s) 353, 553, 902, 1157, 1424, 1819
TscAI CASTG 7 cut(s) 49, 289, 706, 1426, 1914, 2002, 2024
TseFI GTSAC 5 cut(s) 312, 323, 1237, 1730, 2071
TseI GCWGC 6 cut(s) 168, 1283, 1451, 1478, 1825, 1991
Tsp45I GTSAC 5 cut(s) 312, 323, 1237, 1730, 2071
TspGWI ACGGA 3 cut(s) 388, 606, 1367
TspRI CASTG 7 cut(s) 49, 289, 706, 1426, 1914, 2002, 2024
Van91I CCANNNNNTGG 2 cut(s) 437, 1053
Vha464I CTTAAG 2 cut(s) 224, 1571
VpaK11BI GGWCC 2 cut(s) 578, 1688
XapI RAATTY 1 cut(s) 483
XbaI TCTAGA 1 cut(s) 191
XceI RCATGY 1 cut(s) 1753
XmiI GTMKAC 2 cut(s) 97, 1085
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 3 cut(s) 192, 936, 1703
ZraI GACGTC 1 cut(s) 1036
Zsp2I ATGCAT 1 cut(s) 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.