Rw7G014520

Domain of unknown function (DUF3527)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0006314
Physical Location & Seq
Reverse (-)
14214762 .. 14218324
3563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G014520.1

Sequence Viewer

Length: 2190 bp
ATGGGACTAGAGATGGAGTTCGAGAAAAACTGCAGAGTGGGTCTGAGTCCCAACACTGTTCTTCCAACTCATCGGCATTCCTGTGTTGAAAAGAGAAGCACAAAAGGTAGACCGCCACGCAAAGATGATCTATTGAGCATCAAGGAGGGGTTTGTGGAAATCAGTTTTCAGCGCTATCGCAGCACTTCTTGTAAGGTACCATCTAGTCCTGTTGGACAGGAAGTTAACATAGAACTTAAGCGAGGTTCTATATATCAAAACTCCAAGGAGGTTAGGGAAATTAAGAAAATGGGCACTGCTGAGGGAAGGAAAAAGATTGAAAAGTCACGATGTAGTGACTCGTCTTTCTCTTACAGAATTGTCGATTCGTTGCGTAGTTCAGGTGATGAAAGCCCACAGAATAGGTCTTCCGTACTGTCTTTGAAACCCGAACTGAATGTACCATCTGCTGGAAGGCCTCATGTAGAGCCGTGTTCATTGGATAGCATTCTTGAAATTTGTGTGGATCCAGATGACAGGGAAGAGCACTCAGCTGAAGCTTTAGGAGAAGATCCAATGCGTTTGAATCTAAGAAGTGATCCAGTTGCTGGACCTCTAAACAACGGAAATGAACTTCTTGAAAGAGATGAAGTTCACAAATTGCCCAAGTCATTTTCTGCTAAGTTGGAAATGCTTCATACTCCTTCTCCATCGGAGAGTGATCGCTCGTCCAGTGTGAGCTCAAAGGCCCGGTTCAACAATTTAAGAAAAATGTTTGATCCATTCATGAAGTCCAAGTCATTGCGAAGTCCAAGTTATGTTGTGGAACCTGGGGGAGCCAAAACAACTGGAATGGTGGACATGACAAAAAGCAGGACATATCAAAAATCTTTGTTACCTGTCTTTGCAAATACGGTACAGAATGCAGGTTGTGATTCTCTGTGTATCAACCAAGATAACCACCAGTCTAGTGTAGCATCTTCACCGGTTCACCTACATGGCCATCTTAAATTACAAAATAAACATGGAATGCCATTTTTTGAGTTCTCGTTGAAGGGATCAGAAGATGTCTTTGCGGCCAGGACATGGAAAGCGGATAATGGTTTTAACTGGGTGTATACCTTTCATGCCGTTGGTGGTAGAAAGAAGAGCAATGCCAGCGGTGTGGGATTGCATGGTAGCGATAGAGATTCTTCAATGGTGGGACAGATGCCAGTTTCTTGTTATCTATGTTCAGAACTAAGAGATGGAGCTTTTGACAATTCCATGGTGACAGAGTTTGTTTTGTATGATATCTGTCATGCAAGGCAGATTGCAGCAGAAAAAGCACACTCTAATTGTACCCTTGATGATGCTAAACATCCCAAAGGTTCCAATCAGAGCACGGAGGGTGCAACTTTAAAGTTGGGTGATGGGTCTTGTCCAACGAAGGTCAAATCTCAACACAAGAGCAGTGATTCCGATTCTCCAGCCTGGCCATTTGCAGCTCTGCATCCAGGTCTTGAAATTGCAGCCATTGTTATGCAAGTTCCATTTGAAAAGAGAGAGAGCTTGAAATACAAGAGAGGGGATAAAGTATGTGATAAAGTACCTGCAAACCTACTTAAGCTGTCCATGGTTGAACAGAAGAACAAGGATGACCCTGATAATCGAAACTCAGGAAACTTGAAGGTGATAATTCCATCTGGAAATCATGGTTTTCCGGTTGCTGAAAGCAAGGGTCCTTCGTCATTACTAGATCGATGGAGGTTGGGTGGTGGTTGTGACTGTGGTGGCTGGGACATGTCCTGTCCTCTTACTGTGTTAAGCAATCCCAACATTCAGTTAGCTGATAATCAATTATTTGAAGAGACTCAGCAGCCTTTGGAACTTTTTGTTCAGGGATCAAAGGAGAAAAAACCAGCATTGACCATGACAATGGTTGAAGATGGACAGTATGCAGTTGATTTTCATGCACAGTTGTCGACATTACAAGCATTCTCTATGTGTGTTTCTATTCTGCATGGTACAGAAGCATCGACAGCAGTCACTGGGCAGGAGGAAAGCAAACAGTTGTCGCAGTGCAATTCATTGAAAGTGCTTAAAGAGGAAGTGAAGTTCTTAATTGAAGCAGTCACAGAAGGGGAGAAGAAGAAAGTAGCTAAGAAGGTGAAAAAGATCCAACCATCTTATGTGCTCGATTCACCCTTCTCTCCTATTGCACGAGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH DUF3527 TFIIS_M

Protein Analysis

729

Amino Acids

80.28

Weight (kDa)

8.25

Isoelectric Point (pI)

52.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3527 PF12043 322 - 662 3.4e-108 Domain of unknown function (DUF3527)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 896, 1579
Acc65I GGTACC 1 cut(s) 196
AccB1I GGYRCC 1 cut(s) 196
AccB7I CCANNNNNTGG 3 cut(s) 449, 587, 1065
AccI GTMKAC 3 cut(s) 109, 1097, 1943
AciI CCGC 4 cut(s) 113, 1055, 1073, 1140
AclWI GGATC 8 cut(s) 500, 513, 545, 572, 752, 1045, 1870, 2131
AcoI YGGCCR 3 cut(s) 979, 1056, 1454
AcsI RAATTY 1 cut(s) 495
AcuI CTGAAG 1 cut(s) 555
AfaI GTAC 7 cut(s) 198, 414, 441, 897, 1321, 1569, 1987
AfeI AGCGCT 1 cut(s) 173
AfiI CCNNNNNNNGG 3 cut(s) 449, 587, 1065
AflII CTTAAG 2 cut(s) 236, 1583
AflIII ACRYGT 1 cut(s) 1761
AgeI ACCGGT 1 cut(s) 964
AjnI CCWGG 4 cut(s) 808, 1058, 1451, 1474
AloI GAACNNNNNNTCC 2 cut(s) 2060, 2092
AluBI AGCT 9 cut(s) 533, 539, 720, 1232, 1466, 1530, 1588, 1808, 2120
AluI AGCT 9 cut(s) 533, 539, 720, 1232, 1466, 1530, 1588, 1808, 2120
Alw21I GWGCWC 4 cut(s) 528, 722, 1364, 2157
Alw26I GTCTC 1 cut(s) 1823
AlwI GGATC 8 cut(s) 500, 513, 545, 572, 752, 1045, 1870, 2131
AlwNI CAGNNNCTG 2 cut(s) 587, 2009
Aor51HI AGCGCT 1 cut(s) 173
AoxI GGCC 5 cut(s) 455, 726, 979, 1056, 1454
ApeKI GCWGC 5 cut(s) 180, 1295, 1463, 1490, 1837
ApoI RAATTY 1 cut(s) 495
AsiGI ACCGGT 1 cut(s) 964
Asp700I GAANNNNTTC 1 cut(s) 672
Asp718I GGTACC 1 cut(s) 196
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 3 cut(s) 590, 727, 1700
AsuC2I CCSGG 1 cut(s) 730
AsuHPI GGTGA 8 cut(s) 395, 954, 962, 1261, 1400, 1663, 2140, 2154
AvaII GGWCC 2 cut(s) 590, 1700
BaeGI GKGCMC 1 cut(s) 296
BalI TGGCCA 2 cut(s) 981, 1456
BamHI GGATCC 1 cut(s) 505
BanI GGYRCC 1 cut(s) 196
BanII GRGCYC 1 cut(s) 722
BauI CACGAG 1 cut(s) 2181
BbsI GAAGAC 1 cut(s) 399
Bbv12I GWGCWC 4 cut(s) 528, 722, 1364, 2157
BbvCI CCTCAGC 1 cut(s) 300
BbvI GCAGC 5 cut(s) 192, 1307, 1475, 1502, 1849
BceAI ACGGC 2 cut(s) 454, 1094
BcgI CGANNNNNNTGC 2 cut(s) 1923, 1957
BciT130I CCWGG 4 cut(s) 810, 1060, 1453, 1476
BcnI CCSGG 1 cut(s) 730
BcoDI GTCTC 1 cut(s) 1823
BfaI CTAG 4 cut(s) 8, 204, 948, 1715
BfmI CTRYAG 1 cut(s) 31
BfoI RGCGCY 1 cut(s) 175
BfrI CTTAAG 2 cut(s) 236, 1583
BfuAI ACCTGC 2 cut(s) 896, 1579
BisI GCNGC 6 cut(s) 181, 1056, 1296, 1464, 1491, 1838
BlsI GCNGC 6 cut(s) 182, 1057, 1297, 1465, 1492, 1839
Bme1390I CCNGG 5 cut(s) 730, 810, 1060, 1453, 1476
Bme18I GGWCC 2 cut(s) 590, 1700
BmgT120I GGNCC 3 cut(s) 590, 727, 1700
BmiI GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
BmrFI CCNGG 5 cut(s) 730, 810, 1060, 1453, 1476
BmrI ACTGGG 2 cut(s) 1099, 2019
BmsI GCATC 6 cut(s) 147, 965, 1179, 1321, 1480, 2003
BmuI ACTGGG 2 cut(s) 1099, 2019
BoxI GACNNNNGTC 1 cut(s) 2003
BpiI GAAGAC 1 cut(s) 399
BpmI CTGGAG 1 cut(s) 1431
Bpu10I CCTNAGC 1 cut(s) 300
BpuMI CCSGG 1 cut(s) 730
Bsa29I ATCGAT 1 cut(s) 1720
BsaJI CCNNGG 4 cut(s) 264, 809, 1245, 1593
BsaWI WCCGGW 2 cut(s) 964, 1681
BsaXI ACNNNNNCTCC 4 cut(s) 670, 700, 1717, 1747
Bsc4I CCNNNNNNNGG 3 cut(s) 449, 587, 1065
Bse118I RCCGGY 1 cut(s) 964
Bse1I ACTGG 7 cut(s) 581, 711, 832, 943, 1094, 1193, 2014
Bse3DI GCAATG 2 cut(s) 779, 1138
BseBI CCWGG 4 cut(s) 810, 1060, 1453, 1476
BseCI ATCGAT 1 cut(s) 1720
BseDI CCNNGG 4 cut(s) 264, 809, 1245, 1593
BseGI GGATG 3 cut(s) 1339, 1471, 1621
BseLI CCNNNNNNNGG 3 cut(s) 449, 587, 1065
BseMI GCAATG 2 cut(s) 779, 1138
BseMII CTCAG 5 cut(s) 35, 291, 543, 1650, 1847
BseNI ACTGG 7 cut(s) 581, 711, 832, 943, 1094, 1193, 2014
BseSI GKGCMC 1 cut(s) 296
BseXI GCAGC 5 cut(s) 192, 1307, 1475, 1502, 1849
BseYI CCCAGC 1 cut(s) 1755
BshFI GGCC 5 cut(s) 457, 728, 981, 1058, 1456
BshNI GGYRCC 1 cut(s) 196
BshTI ACCGGT 1 cut(s) 964
BshVI ATCGAT 1 cut(s) 1720
BsiHKAI GWGCWC 4 cut(s) 528, 722, 1364, 2157
BsiSI CCGG 3 cut(s) 730, 965, 1682
BslFI GGGAC 4 cut(s) 18, 33, 1197, 1772
BslI CCNNNNNNNGG 3 cut(s) 449, 587, 1065
BsmAI GTCTC 1 cut(s) 1823
BsmFI GGGAC 4 cut(s) 18, 33, 1197, 1772
BsmI GAATGC 5 cut(s) 76, 486, 907, 1014, 1955
BsnI GGCC 5 cut(s) 457, 728, 981, 1058, 1456
Bsp1286I GDGCHC 5 cut(s) 296, 528, 722, 1364, 2157
Bsp19I CCATGG 2 cut(s) 1245, 1593
BspACI CCGC 4 cut(s) 113, 1055, 1073, 1140
BspANI GGCC 5 cut(s) 457, 728, 981, 1058, 1456
BspCNI CTCAG 5 cut(s) 36, 292, 542, 1649, 1846
BspDI ATCGAT 1 cut(s) 1720
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
BspMAI CTGCAG 1 cut(s) 35
BspMI ACCTGC 2 cut(s) 896, 1579
BspPI GGATC 8 cut(s) 500, 513, 545, 572, 752, 1045, 1870, 2131
BspQI GCTCTTC 2 cut(s) 516, 1121
BspT107I GGYRCC 1 cut(s) 196
BspTI CTTAAG 2 cut(s) 236, 1583
BsrDI GCAATG 2 cut(s) 779, 1138
BsrFI RCCGGY 1 cut(s) 964
BsrI ACTGG 7 cut(s) 581, 711, 832, 943, 1094, 1193, 2014
BssAI RCCGGY 1 cut(s) 964
BssECI CCNNGG 4 cut(s) 264, 809, 1245, 1593
BssNAI GTATAC 1 cut(s) 1098
BssSI CACGAG 1 cut(s) 2181
BssT1I CCWWGG 3 cut(s) 264, 1245, 1593
Bst1107I GTATAC 1 cut(s) 1098
Bst2BI CACGAG 1 cut(s) 2181
Bst2UI CCWGG 4 cut(s) 810, 1060, 1453, 1476
Bst4CI ACNGT 8 cut(s) 58, 417, 895, 1748, 1780, 1914, 1938, 2031
Bst6I CTCTTC 3 cut(s) 516, 1121, 1821
BstAFI CTTAAG 2 cut(s) 236, 1583
BstC8I GCNNGC 1 cut(s) 1138
BstDEI CTNAG 9 cut(s) 44, 300, 529, 569, 660, 1220, 1636, 1833, 2121
BstDSI CCRYGG 2 cut(s) 1245, 1593
BstF5I GGATG 3 cut(s) 1339, 1471, 1621
BstH2I RGCGCY 1 cut(s) 175
BstHHI GCGC 1 cut(s) 174
BstMAI GTCTC 1 cut(s) 1823
BstMWI GCNNNNNNNGC 4 cut(s) 180, 1137, 1304, 2000
BstNI CCWGG 4 cut(s) 810, 1060, 1453, 1476
BstNSI RCATGY 1 cut(s) 1765
BstPAI GACNNNNGTC 1 cut(s) 2003
BstSCI CCNGG 5 cut(s) 728, 808, 1058, 1451, 1474
BstSFI CTRYAG 1 cut(s) 31
BstSLI GKGCMC 1 cut(s) 296
BstV1I GCAGC 5 cut(s) 192, 1307, 1475, 1502, 1849
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 3 cut(s) 505, 550, 2136
BstXI CCANNNNNNTGG 2 cut(s) 1144, 1897
BstYI RGATCY 3 cut(s) 505, 550, 2136
BstZ17I GTATAC 1 cut(s) 1098
Bsu15I ATCGAT 1 cut(s) 1720
BsuRI GGCC 5 cut(s) 457, 728, 981, 1058, 1456
BsuTUI ATCGAT 1 cut(s) 1720
BtgI CCRYGG 2 cut(s) 1245, 1593
BtsCI GGATG 3 cut(s) 1339, 1471, 1621
BtsI GCAGTG 3 cut(s) 294, 1438, 2045
BtsIMutI CAGTG 6 cut(s) 54, 294, 718, 1438, 2007, 2045
BveI ACCTGC 2 cut(s) 896, 1579
Cac8I GCNNGC 1 cut(s) 1138
CaiI CAGNNNCTG 2 cut(s) 587, 2009
CciI TCATGA 1 cut(s) 765
CfoI GCGC 1 cut(s) 174
Cfr10I RCCGGY 1 cut(s) 964
Cfr13I GGNCC 3 cut(s) 590, 727, 1700
ClaI ATCGAT 1 cut(s) 1720
Csp6I GTAC 7 cut(s) 197, 413, 440, 896, 1320, 1568, 1986
CspAI ACCGGT 1 cut(s) 964
CviQI GTAC 7 cut(s) 197, 413, 440, 896, 1320, 1568, 1986
DdeI CTNAG 9 cut(s) 44, 300, 529, 569, 660, 1220, 1636, 1833, 2121
DraI TTTAAA 1 cut(s) 1380
EaeI YGGCCR 3 cut(s) 979, 1056, 1454
Eam1104I CTCTTC 3 cut(s) 516, 1121, 1821
EarI CTCTTC 3 cut(s) 516, 1121, 1821
Ecl136II GAGCTC 1 cut(s) 720
Eco130I CCWWGG 3 cut(s) 264, 1245, 1593
Eco147I AGGCCT 1 cut(s) 457
Eco24I GRGCYC 1 cut(s) 722
Eco32I GATATC 1 cut(s) 1273
Eco47I GGWCC 2 cut(s) 590, 1700
Eco47III AGCGCT 1 cut(s) 173
Eco53kI GAGCTC 1 cut(s) 720
Eco57I CTGAAG 1 cut(s) 555
EcoICRI GAGCTC 1 cut(s) 720
EcoO109I RGGNCCY 1 cut(s) 1700
EcoRII CCWGG 4 cut(s) 808, 1058, 1451, 1474
EcoRV GATATC 1 cut(s) 1273
EcoT14I CCWWGG 3 cut(s) 264, 1245, 1593
EcoT38I GRGCYC 1 cut(s) 722
ErhI CCWWGG 3 cut(s) 264, 1245, 1593
FaqI GGGAC 4 cut(s) 18, 33, 1197, 1772
FblI GTMKAC 3 cut(s) 109, 1097, 1943
Fnu4HI GCNGC 6 cut(s) 181, 1056, 1296, 1464, 1491, 1838
FokI GGATG 3 cut(s) 1326, 1458, 1628
FriOI GRGCYC 1 cut(s) 722
Fsp4HI GCNGC 6 cut(s) 181, 1056, 1296, 1464, 1491, 1838
FspBI CTAG 4 cut(s) 8, 204, 948, 1715
GlaI GCGC 1 cut(s) 173
GluI GCNGC 6 cut(s) 181, 1056, 1296, 1464, 1491, 1838
GsaI CCCAGC 1 cut(s) 1759
GsuI CTGGAG 1 cut(s) 1431
HaeII RGCGCY 1 cut(s) 175
HaeIII GGCC 5 cut(s) 457, 728, 981, 1058, 1456
HapII CCGG 3 cut(s) 730, 965, 1682
HhaI GCGC 1 cut(s) 174
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 2 cut(s) 226, 1944
HindII GTYRAC 2 cut(s) 226, 1944
HindIII AAGCTT 1 cut(s) 537
HpaI GTTAAC 1 cut(s) 226
HpaII CCGG 3 cut(s) 730, 965, 1682
HphI GGTGA 8 cut(s) 395, 954, 962, 1261, 1400, 1663, 2140, 2154
Hpy166II GTNNAC 7 cut(s) 110, 226, 634, 838, 970, 1098, 1944
Hpy188I TCNGA 6 cut(s) 45, 694, 1042, 1216, 1359, 1441
Hpy188III TCNNGA 9 cut(s) 22, 327, 491, 509, 617, 766, 1481, 1638, 1665
Hpy8I GTNNAC 7 cut(s) 110, 226, 634, 838, 970, 1098, 1944
HpyCH4III ACNGT 8 cut(s) 58, 417, 895, 1748, 1780, 1914, 1938, 2031
HpyF10VI GCNNNNNNNGC 4 cut(s) 180, 1137, 1304, 2000
HpyF3I CTNAG 9 cut(s) 44, 300, 529, 569, 660, 1220, 1636, 1833, 2121
HspAI GCGC 1 cut(s) 172
KpnI GGTACC 1 cut(s) 200
KspAI GTTAAC 1 cut(s) 226
LguI GCTCTTC 2 cut(s) 516, 1121
LmnI GCTCC 2 cut(s) 815, 1229
Lsp1109I GCAGC 5 cut(s) 192, 1307, 1475, 1502, 1849
LweI GCATC 6 cut(s) 147, 965, 1179, 1321, 1480, 2003
MaeI CTAG 4 cut(s) 8, 204, 948, 1715
MaeIII GTNAC 7 cut(s) 324, 335, 873, 1249, 1742, 2005, 2092
MflI RGATCY 3 cut(s) 505, 550, 2136
MhlI GDGCHC 5 cut(s) 296, 528, 722, 1364, 2157
MlsI TGGCCA 2 cut(s) 981, 1456
MluNI TGGCCA 2 cut(s) 981, 1456
MlyI GAGTC 3 cut(s) 55, 332, 1825
MmeI TCCRAC 5 cut(s) 89, 193, 645, 1427, 2164
Mox20I TGGCCA 2 cut(s) 981, 1456
MroXI GAANNNNTTC 1 cut(s) 672
MscI TGGCCA 2 cut(s) 981, 1456
MslI CAYNNNNRTG 4 cut(s) 81, 975, 1499, 1895
Msp20I TGGCCA 2 cut(s) 981, 1456
MspA1I CMGCKG 2 cut(s) 533, 1140
MspCI CTTAAG 2 cut(s) 236, 1583
MspI CCGG 3 cut(s) 730, 965, 1682
MspR9I CCNGG 5 cut(s) 730, 810, 1060, 1453, 1476
Mva1269I GAATGC 5 cut(s) 76, 486, 907, 1014, 1955
MvaI CCWGG 4 cut(s) 810, 1060, 1453, 1476
MwoI GCNNNNNNNGC 4 cut(s) 180, 1137, 1304, 2000
NciI CCSGG 1 cut(s) 730
NcoI CCATGG 2 cut(s) 1245, 1593
NlaIV GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
NmuCI GTSAC 6 cut(s) 324, 335, 1249, 1742, 2005, 2092
NspI RCATGY 1 cut(s) 1765
PagI TCATGA 1 cut(s) 765
PceI AGGCCT 1 cut(s) 457
PciI ACATGT 1 cut(s) 1761
PciSI GCTCTTC 2 cut(s) 516, 1121
PctI GAATGC 5 cut(s) 76, 486, 907, 1014, 1955
PdmI GAANNNNTTC 1 cut(s) 672
PfeI GAWTC 7 cut(s) 365, 565, 914, 1169, 1436, 1442, 2159
PflMI CCANNNNNTGG 3 cut(s) 449, 587, 1065
PinAI ACCGGT 1 cut(s) 964
PkrI GCNGC 6 cut(s) 182, 1057, 1297, 1465, 1492, 1839
PleI GAGTC 3 cut(s) 54, 332, 1825
PpsI GAGTC 3 cut(s) 54, 332, 1825
PpuMI RGGWCCY 1 cut(s) 1700
PscI ACATGT 1 cut(s) 1761
PshAI GACNNNNGTC 1 cut(s) 2003
Psp124BI GAGCTC 1 cut(s) 722
Psp5II RGGWCCY 1 cut(s) 1700
Psp6I CCWGG 4 cut(s) 808, 1058, 1451, 1474
PspFI CCCAGC 1 cut(s) 1755
PspGI CCWGG 4 cut(s) 808, 1058, 1451, 1474
PspN4I GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
PspPI GGNCC 3 cut(s) 590, 727, 1700
PspPPI RGGWCCY 1 cut(s) 1700
PsrI GAACNNNNNNTAC 2 cut(s) 423, 455
PstI CTGCAG 1 cut(s) 35
PstNI CAGNNNCTG 2 cut(s) 587, 2009
PsuI RGATCY 3 cut(s) 505, 550, 2136
PvuII CAGCTG 1 cut(s) 533
RsaI GTAC 7 cut(s) 198, 414, 441, 897, 1321, 1569, 1987
RsaNI GTAC 7 cut(s) 197, 413, 440, 896, 1320, 1568, 1986
RseI CAYNNNNRTG 4 cut(s) 81, 975, 1499, 1895
SacI GAGCTC 1 cut(s) 722
SalI GTCGAC 1 cut(s) 1942
SapI GCTCTTC 2 cut(s) 516, 1121
SatI GCNGC 6 cut(s) 181, 1056, 1296, 1464, 1491, 1838
Sau96I GGNCC 3 cut(s) 590, 727, 1700
SchI GAGTC 3 cut(s) 55, 332, 1825
ScrFI CCNGG 5 cut(s) 730, 810, 1060, 1453, 1476
SduI GDGCHC 5 cut(s) 296, 528, 722, 1364, 2157
SfaNI GCATC 6 cut(s) 147, 965, 1179, 1321, 1480, 2003
SfcI CTRYAG 1 cut(s) 31
SinI GGWCC 2 cut(s) 590, 1700
SmiMI CAYNNNNRTG 4 cut(s) 81, 975, 1499, 1895
SmlI CTYRAG 2 cut(s) 236, 1583
SmoI CTYRAG 2 cut(s) 236, 1583
SseBI AGGCCT 1 cut(s) 457
SsiI CCGC 4 cut(s) 113, 1055, 1073, 1140
SspMI CTAG 4 cut(s) 8, 204, 948, 1715
SstI GAGCTC 1 cut(s) 722
StuI AGGCCT 1 cut(s) 457
StyD4I CCNGG 5 cut(s) 728, 808, 1058, 1451, 1474
StyI CCWWGG 3 cut(s) 264, 1245, 1593
TaaI ACNGT 8 cut(s) 58, 417, 895, 1748, 1780, 1914, 1938, 2031
TaqI TCGA 7 cut(s) 21, 363, 1630, 1720, 1943, 1997, 2157
TauI GCSGC 1 cut(s) 1058
TfiI GAWTC 7 cut(s) 365, 565, 914, 1169, 1436, 1442, 2159
TscAI CASTG 6 cut(s) 61, 301, 718, 1438, 2014, 2045
TseFI GTSAC 6 cut(s) 324, 335, 1249, 1742, 2005, 2092
TseI GCWGC 5 cut(s) 180, 1295, 1463, 1490, 1837
Tsp45I GTSAC 6 cut(s) 324, 335, 1249, 1742, 2005, 2092
TspGWI ACGGA 3 cut(s) 400, 618, 1379
TspRI CASTG 6 cut(s) 61, 301, 718, 1438, 2014, 2045
Van91I CCANNNNNTGG 3 cut(s) 449, 587, 1065
Vha464I CTTAAG 2 cut(s) 236, 1583
VpaK11BI GGWCC 2 cut(s) 590, 1700
XapI RAATTY 1 cut(s) 495
XceI RCATGY 1 cut(s) 1765
XmiI GTMKAC 3 cut(s) 109, 1097, 1943
XmnI GAANNNNTTC 1 cut(s) 672
XspI CTAG 4 cut(s) 8, 204, 948, 1715
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.