Rroxscaffold_3G00258280

Domain of unknown function (DUF3527)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0006314
Physical Location & Seq
Forward (+)
52588587 .. 52592741
4155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00258280.1

Sequence Viewer

Length: 2175 bp
ATGGAGTTCGAGAAAAATTGCAGAGTGGGTCTGAGTCCCAACACTGTTCTTCCAACTCATCGGCATTCCTGTGTTGAAAAGAGAAGCACAAAAGGTAGACCGCCACGCAAAGATGATCTATTGAGCATCAAGGAGGGGTTTGTGGAAATCAGCTTTCAGCGCTATCGCAGCACTTCTTGTAAGGTACCATCTAGACCTGTTGGACAGGAAGTTAACACAGAACTTAAGCGAGGTTCTATATATCAAAGCTCCAAGGAGGTTAGGGAAATTAAGAAAATGGGCACTGCTGAGGGAAGGAAAAAGATTGAAAAGTCACGATGTAGTGACTCCTCTTTCTCTTACAGAATTGTCGATTCGTTGCGTAGTTCAGGTGATGAAATCCCACAGAATAGGTCTTCCGTACTGTCTTTGAAACCCGAACTGAATGTACCATCTGCTAGAAGGCCTCATGTAGAGCCGTGTTCATTGGATAGCATTCTTGAAATTTGTGTGGATCCAGATGACAGGGAAGAGCACTCAGCTGAAGCTTTAGGAGAAGATCCAATGCGTTTGAATCTAAGAAGTGATCCGGTTGCTGGACCTCTAAATAACGGAAATGAACTTCTTGAAAGAGATGAAGTTCACAAATTGCACAAGTCATTCTCTGCTAAGGTGGAAATGCTTCATACTCCTTCTCCATCGGAGAGTGATCGCTCGTCCAGTGTGAGTTCAAAGGCCCGGTTCAACAATTTAAGAAAAATGTTTGATCCATTCATGAAGTCCAAGTCATTGCGATGTCCAAGTTATGTTGTGGAACCTGGGGGAGCCAAAACAACTGGAATGGTGGACATGACAAAAAGCAGGACATATCAAAAATCATTGTTGCCTGTCTTTTCAAATACGGTACAGAATGCAGGTTGTGATTCTCTGTGTATCAACCAAGATAACCACCAGTCTAGTGTAGCATCTTCACCGGTTCACCTACATGGCCATCTTAAATTACAAAATAAACATGGAATGCCATTTTTTGAGTTCTCGTTGAAGGGATCAGAAGATGTCTTTGTGGCCAGGACATGGAAAGCGGATAATGGTTTTAACTGGGTGTATACCTTTCATGCCGTTGGTGGTAGAAAGAAGAGCAATGCCAGCAGTGTGGGATTGCATGGTAGCAATAGAGATTCTTCAATGGTGGGACAGATGCAAGTTTCTTGTTATCTATGTTCAGAACTAAGAGATGGAGCTTTTGACAATTCCATGGTGACAGAGTTTGTCTTGTATGATATCTCTCAAGCAAGGCAAATTGCAGCAGAAAAAGCAAACTCTAATTGTACCCTTGATGATGCTAAACATCCCAAAGGTTCCAATCAGAGCACGGAGGGTGCAACTTTAAAGTTGGGTGATGGGTCTTGTCCAACGAAGGTCAAATCTCAACACAAGAGCAGTGATTCCGATTCTTCAGCCTGGCCATTTGTAGCTCTGCATGCAGGTCTTGAAATTGCAGCCATTGTTATGCAAGTTCCATTTGAAAAGAGAGAGAGCTTGAAATACAAAAGAGGGGATAAGGTATGTGATAAAGTACCTGCAAACCTACTTAAGCAGTCCATGGTTGAACAGAAGAAGGATGACCCTGATAATCGAAACTCAGGAAACTTGAAGGTGATAATTCCATCTGGAAATCATGGTTTTCCGGTTGCTGAAAGCAAGGGTCCTTCGTCGTTACTAGATCGATGGAGGTTGGGTGGTGGTTGTGACTGTGGTGGCTGGGACATGTCCTGTCCTCTTACTGTGTTAAGCAATCCCAACATTCAGTTAGCTGATAATCAATTATTTGAAGAGAATCAGCAGCCTTTGGAACTTTTTGTTCAGGGATCAAAGGAGAAAAAACCAGCATTGACCATGACAATGGTTGAAGATGGACAGTATGCAGTTGATTTTCATGCACAGTTGTCGACATTACAAGCATTCTCTATGTGTGTTTCTATTCTGCATGGTACAGAAACATCGACAGCAGCCACTGGGCAGGAGGAAAGCAAACAGTTGTCGCAGTGCAATTCATTGAAAGTGCTTAAAGAGGAAGTGAAGTTCTTAATTGAAGCAGTCACAGAAGGGGAGAAGAAGAAAGTAGCTAAGAGGGTGAAAAAGATCCAACCATCTTATGTGCTCGATCCACCCTTCTCTCCTATTGCACGAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH DUF3527 TFIIS_M

Protein Analysis

724

Amino Acids

80.05

Weight (kDa)

8.6

Isoelectric Point (pI)

50.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3527 PF12043 318 - 657 3.4e-109 Domain of unknown function (DUF3527)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 884, 1454, 1567
Acc65I GGTACC 1 cut(s) 184
AccB1I GGYRCC 1 cut(s) 184
AccB7I CCANNNNNTGG 1 cut(s) 1053
AccI GTMKAC 3 cut(s) 97, 1085, 1928
AciI CCGC 2 cut(s) 101, 1061
AclWI GGATC 9 cut(s) 488, 501, 533, 560, 740, 1033, 1855, 2116, 2138
AcoI YGGCCR 3 cut(s) 967, 1044, 1442
AcsI RAATTY 1 cut(s) 483
AcuI CTGAAG 2 cut(s) 543, 1419
AfaI GTAC 7 cut(s) 186, 402, 429, 885, 1309, 1557, 1972
AfeI AGCGCT 1 cut(s) 161
AfiI CCNNNNNNNGG 2 cut(s) 575, 1053
AflII CTTAAG 2 cut(s) 224, 1571
AflIII ACRYGT 1 cut(s) 1746
AgeI ACCGGT 1 cut(s) 952
AjnI CCWGG 3 cut(s) 796, 1046, 1439
AloI GAACNNNNNNTCC 2 cut(s) 2045, 2077
AluBI AGCT 9 cut(s) 153, 249, 521, 527, 1220, 1454, 1518, 1793, 2105
AluI AGCT 9 cut(s) 153, 249, 521, 527, 1220, 1454, 1518, 1793, 2105
Alw21I GWGCWC 3 cut(s) 516, 1352, 2142
AlwI GGATC 9 cut(s) 488, 501, 533, 560, 740, 1033, 1855, 2116, 2138
AlwNI CAGNNNCTG 1 cut(s) 1994
Aor51HI AGCGCT 1 cut(s) 161
AoxI GGCC 5 cut(s) 443, 714, 967, 1044, 1442
ApeKI GCWGC 5 cut(s) 168, 1283, 1478, 1822, 1988
ApoI RAATTY 1 cut(s) 483
AsiGI ACCGGT 1 cut(s) 952
Asp700I GAANNNNTTC 1 cut(s) 660
Asp718I GGTACC 1 cut(s) 184
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 3 cut(s) 578, 715, 1685
AsuC2I CCSGG 1 cut(s) 718
AsuHPI GGTGA 7 cut(s) 383, 942, 950, 1249, 1388, 1648, 2125
AvaII GGWCC 2 cut(s) 578, 1685
BaeGI GKGCMC 1 cut(s) 284
BalI TGGCCA 3 cut(s) 969, 1046, 1444
BamHI GGATCC 1 cut(s) 493
BanI GGYRCC 1 cut(s) 184
BauI CACGAG 1 cut(s) 2166
BbsI GAAGAC 1 cut(s) 387
Bbv12I GWGCWC 3 cut(s) 516, 1352, 2142
BbvCI CCTCAGC 1 cut(s) 288
BbvI GCAGC 5 cut(s) 180, 1295, 1490, 1834, 2000
BceAI ACGGC 2 cut(s) 442, 1082
BcgI CGANNNNNNTGC 2 cut(s) 1908, 1942
BciT130I CCWGG 3 cut(s) 798, 1048, 1441
BcnI CCSGG 1 cut(s) 718
BfaI CTAG 5 cut(s) 192, 438, 936, 1700, 2173
BfoI RGCGCY 1 cut(s) 163
BfrI CTTAAG 2 cut(s) 224, 1571
BfuAI ACCTGC 3 cut(s) 884, 1454, 1567
BisI GCNGC 5 cut(s) 169, 1284, 1479, 1823, 1989
BlsI GCNGC 5 cut(s) 170, 1285, 1480, 1824, 1990
Bme1390I CCNGG 4 cut(s) 718, 798, 1048, 1441
Bme18I GGWCC 2 cut(s) 578, 1685
BmgT120I GGNCC 3 cut(s) 578, 715, 1685
BmiI GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1686
BmrFI CCNGG 4 cut(s) 718, 798, 1048, 1441
BmrI ACTGGG 2 cut(s) 1087, 2004
BmsI GCATC 4 cut(s) 135, 953, 1167, 1309
BmuI ACTGGG 2 cut(s) 1087, 2004
BpiI GAAGAC 1 cut(s) 387
Bpu10I CCTNAGC 2 cut(s) 288, 648
BpuEI CTTGAG 1 cut(s) 1251
BpuMI CCSGG 1 cut(s) 718
Bsa29I ATCGAT 1 cut(s) 1705
BsaJI CCNNGG 4 cut(s) 252, 797, 1233, 1581
BsaWI WCCGGW 3 cut(s) 568, 952, 1666
BsaXI ACNNNNNCTCC 4 cut(s) 658, 688, 1702, 1732
Bsc4I CCNNNNNNNGG 2 cut(s) 575, 1053
Bse118I RCCGGY 1 cut(s) 952
Bse1I ACTGG 5 cut(s) 699, 820, 931, 1082, 1999
Bse3DI GCAATG 2 cut(s) 767, 1126
BseBI CCWGG 3 cut(s) 798, 1048, 1441
BseCI ATCGAT 1 cut(s) 1705
BseDI CCNNGG 4 cut(s) 252, 797, 1233, 1581
BseGI GGATG 2 cut(s) 1327, 1606
BseLI CCNNNNNNNGG 2 cut(s) 575, 1053
BseMI GCAATG 2 cut(s) 767, 1126
BseMII CTCAG 4 cut(s) 23, 279, 531, 1635
BseNI ACTGG 5 cut(s) 699, 820, 931, 1082, 1999
BseRI GAGGAG 1 cut(s) 319
BseSI GKGCMC 1 cut(s) 284
BseXI GCAGC 5 cut(s) 180, 1295, 1490, 1834, 2000
BseYI CCCAGC 1 cut(s) 1740
BshFI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
BshNI GGYRCC 1 cut(s) 184
BshTI ACCGGT 1 cut(s) 952
BshVI ATCGAT 1 cut(s) 1705
BsiHKAI GWGCWC 3 cut(s) 516, 1352, 2142
BsiSI CCGG 4 cut(s) 569, 718, 953, 1667
BslFI GGGAC 3 cut(s) 21, 1185, 1757
BslI CCNNNNNNNGG 2 cut(s) 575, 1053
BsmFI GGGAC 3 cut(s) 21, 1185, 1757
BsmI GAATGC 5 cut(s) 64, 474, 895, 1002, 1940
BsnI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
Bsp1286I GDGCHC 4 cut(s) 284, 516, 1352, 2142
Bsp19I CCATGG 2 cut(s) 1233, 1581
BspACI CCGC 2 cut(s) 101, 1061
BspANI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
BspCNI CTCAG 4 cut(s) 24, 280, 530, 1634
BspDI ATCGAT 1 cut(s) 1705
BspHI TCATGA 1 cut(s) 753
BspLI GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1686
BspMI ACCTGC 3 cut(s) 884, 1454, 1567
BspPI GGATC 9 cut(s) 488, 501, 533, 560, 740, 1033, 1855, 2116, 2138
BspQI GCTCTTC 2 cut(s) 504, 1109
BspT107I GGYRCC 1 cut(s) 184
BspTI CTTAAG 2 cut(s) 224, 1571
BsrDI GCAATG 2 cut(s) 767, 1126
BsrFI RCCGGY 1 cut(s) 952
BsrI ACTGG 5 cut(s) 699, 820, 931, 1082, 1999
BssAI RCCGGY 1 cut(s) 952
BssECI CCNNGG 4 cut(s) 252, 797, 1233, 1581
BssNAI GTATAC 1 cut(s) 1086
BssSI CACGAG 1 cut(s) 2166
BssT1I CCWWGG 3 cut(s) 252, 1233, 1581
Bst1107I GTATAC 1 cut(s) 1086
Bst2BI CACGAG 1 cut(s) 2166
Bst2UI CCWGG 3 cut(s) 798, 1048, 1441
Bst4CI ACNGT 8 cut(s) 46, 405, 883, 1733, 1765, 1899, 1923, 2016
Bst6I CTCTTC 3 cut(s) 504, 1109, 1806
BstAFI CTTAAG 2 cut(s) 224, 1571
BstC8I GCNNGC 2 cut(s) 1126, 1461
BstDEI CTNAG 8 cut(s) 32, 288, 517, 557, 648, 1208, 1621, 2106
BstDSI CCRYGG 2 cut(s) 1233, 1581
BstF5I GGATG 2 cut(s) 1327, 1606
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 1 cut(s) 162
BstMWI GCNNNNNNNGC 5 cut(s) 159, 168, 1125, 1292, 1460
BstNI CCWGG 3 cut(s) 798, 1048, 1441
BstNSI RCATGY 2 cut(s) 1463, 1750
BstSCI CCNGG 4 cut(s) 716, 796, 1046, 1439
BstSLI GKGCMC 1 cut(s) 284
BstV1I GCAGC 5 cut(s) 180, 1295, 1490, 1834, 2000
BstV2I GAAGAC 1 cut(s) 387
BstX2I RGATCY 3 cut(s) 493, 538, 2121
BstXI CCANNNNNNTGG 2 cut(s) 1132, 1882
BstYI RGATCY 3 cut(s) 493, 538, 2121
BstZ17I GTATAC 1 cut(s) 1086
Bsu15I ATCGAT 1 cut(s) 1705
BsuRI GGCC 5 cut(s) 445, 716, 969, 1046, 1444
BsuTUI ATCGAT 1 cut(s) 1705
BtgI CCRYGG 2 cut(s) 1233, 1581
BtgZI GCGATG 1 cut(s) 787
BtsCI GGATG 2 cut(s) 1327, 1606
BtsI GCAGTG 4 cut(s) 282, 1135, 1426, 2030
BtsIMutI CAGTG 7 cut(s) 42, 282, 706, 1135, 1426, 1992, 2030
BveI ACCTGC 3 cut(s) 884, 1454, 1567
Cac8I GCNNGC 2 cut(s) 1126, 1461
CaiI CAGNNNCTG 1 cut(s) 1994
CciI TCATGA 1 cut(s) 753
CfoI GCGC 1 cut(s) 162
Cfr10I RCCGGY 1 cut(s) 952
Cfr13I GGNCC 3 cut(s) 578, 715, 1685
ClaI ATCGAT 1 cut(s) 1705
Csp6I GTAC 7 cut(s) 185, 401, 428, 884, 1308, 1556, 1971
CspAI ACCGGT 1 cut(s) 952
CviQI GTAC 7 cut(s) 185, 401, 428, 884, 1308, 1556, 1971
DdeI CTNAG 8 cut(s) 32, 288, 517, 557, 648, 1208, 1621, 2106
DraI TTTAAA 1 cut(s) 1368
EaeI YGGCCR 3 cut(s) 967, 1044, 1442
Eam1104I CTCTTC 3 cut(s) 504, 1109, 1806
EarI CTCTTC 3 cut(s) 504, 1109, 1806
Eco130I CCWWGG 3 cut(s) 252, 1233, 1581
Eco147I AGGCCT 1 cut(s) 445
Eco32I GATATC 1 cut(s) 1261
Eco47I GGWCC 2 cut(s) 578, 1685
Eco47III AGCGCT 1 cut(s) 161
Eco57I CTGAAG 2 cut(s) 543, 1419
EcoO109I RGGNCCY 1 cut(s) 1685
EcoRII CCWGG 3 cut(s) 796, 1046, 1439
EcoRV GATATC 1 cut(s) 1261
EcoT14I CCWWGG 3 cut(s) 252, 1233, 1581
ErhI CCWWGG 3 cut(s) 252, 1233, 1581
FaqI GGGAC 3 cut(s) 21, 1185, 1757
FblI GTMKAC 3 cut(s) 97, 1085, 1928
Fnu4HI GCNGC 5 cut(s) 169, 1284, 1479, 1823, 1989
FokI GGATG 2 cut(s) 1314, 1613
Fsp4HI GCNGC 5 cut(s) 169, 1284, 1479, 1823, 1989
FspBI CTAG 5 cut(s) 192, 438, 936, 1700, 2173
GlaI GCGC 1 cut(s) 161
GluI GCNGC 5 cut(s) 169, 1284, 1479, 1823, 1989
GsaI CCCAGC 1 cut(s) 1744
HaeII RGCGCY 1 cut(s) 163
HaeIII GGCC 5 cut(s) 445, 716, 969, 1046, 1444
HapII CCGG 4 cut(s) 569, 718, 953, 1667
HhaI GCGC 1 cut(s) 162
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HincII GTYRAC 2 cut(s) 214, 1929
HindII GTYRAC 2 cut(s) 214, 1929
HindIII AAGCTT 1 cut(s) 525
HpaI GTTAAC 1 cut(s) 214
HpaII CCGG 4 cut(s) 569, 718, 953, 1667
HphI GGTGA 7 cut(s) 383, 942, 950, 1249, 1388, 1648, 2125
Hpy166II GTNNAC 7 cut(s) 98, 214, 622, 826, 958, 1086, 1929
Hpy188I TCNGA 6 cut(s) 33, 682, 1030, 1204, 1347, 1429
Hpy8I GTNNAC 7 cut(s) 98, 214, 622, 826, 958, 1086, 1929
Hpy99I CGWCG 1 cut(s) 1696
HpyCH4III ACNGT 8 cut(s) 46, 405, 883, 1733, 1765, 1899, 1923, 2016
HpyF10VI GCNNNNNNNGC 5 cut(s) 159, 168, 1125, 1292, 1460
HpyF3I CTNAG 8 cut(s) 32, 288, 517, 557, 648, 1208, 1621, 2106
HspAI GCGC 1 cut(s) 160
KpnI GGTACC 1 cut(s) 188
KspAI GTTAAC 1 cut(s) 214
LguI GCTCTTC 2 cut(s) 504, 1109
LmnI GCTCC 3 cut(s) 254, 803, 1217
Lsp1109I GCAGC 5 cut(s) 180, 1295, 1490, 1834, 2000
LweI GCATC 4 cut(s) 135, 953, 1167, 1309
MaeI CTAG 5 cut(s) 192, 438, 936, 1700, 2173
MaeIII GTNAC 6 cut(s) 312, 323, 1237, 1695, 1727, 2077
MflI RGATCY 3 cut(s) 493, 538, 2121
MhlI GDGCHC 4 cut(s) 284, 516, 1352, 2142
MlsI TGGCCA 3 cut(s) 969, 1046, 1444
MluNI TGGCCA 3 cut(s) 969, 1046, 1444
MlyI GAGTC 2 cut(s) 43, 320
MmeI TCCRAC 4 cut(s) 77, 181, 1415, 2149
Mox20I TGGCCA 3 cut(s) 969, 1046, 1444
MroXI GAANNNNTTC 1 cut(s) 660
MscI TGGCCA 3 cut(s) 969, 1046, 1444
MslI CAYNNNNRTG 5 cut(s) 69, 772, 963, 1487, 1880
Msp20I TGGCCA 3 cut(s) 969, 1046, 1444
MspA1I CMGCKG 1 cut(s) 521
MspCI CTTAAG 2 cut(s) 224, 1571
MspI CCGG 4 cut(s) 569, 718, 953, 1667
MspR9I CCNGG 4 cut(s) 718, 798, 1048, 1441
Mva1269I GAATGC 5 cut(s) 64, 474, 895, 1002, 1940
MvaI CCWGG 3 cut(s) 798, 1048, 1441
MwoI GCNNNNNNNGC 5 cut(s) 159, 168, 1125, 1292, 1460
NciI CCSGG 1 cut(s) 718
NcoI CCATGG 2 cut(s) 1233, 1581
NlaIV GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1686
NmuCI GTSAC 5 cut(s) 312, 323, 1237, 1727, 2077
NspI RCATGY 2 cut(s) 1463, 1750
PaeI GCATGC 1 cut(s) 1463
PagI TCATGA 1 cut(s) 753
PceI AGGCCT 1 cut(s) 445
PciI ACATGT 1 cut(s) 1746
PciSI GCTCTTC 2 cut(s) 504, 1109
PctI GAATGC 5 cut(s) 64, 474, 895, 1002, 1940
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 7 cut(s) 353, 553, 902, 1157, 1424, 1430, 1816
PflMI CCANNNNNTGG 1 cut(s) 1053
PinAI ACCGGT 1 cut(s) 952
PkrI GCNGC 5 cut(s) 170, 1285, 1480, 1824, 1990
PleI GAGTC 2 cut(s) 42, 320
PpsI GAGTC 2 cut(s) 42, 320
PpuMI RGGWCCY 1 cut(s) 1685
PscI ACATGT 1 cut(s) 1746
Psp5II RGGWCCY 1 cut(s) 1685
Psp6I CCWGG 3 cut(s) 796, 1046, 1439
PspFI CCCAGC 1 cut(s) 1740
PspGI CCWGG 3 cut(s) 796, 1046, 1439
PspN4I GGNNCC 6 cut(s) 186, 495, 795, 805, 1339, 1686
PspPI GGNCC 3 cut(s) 578, 715, 1685
PspPPI RGGWCCY 1 cut(s) 1685
PsrI GAACNNNNNNTAC 2 cut(s) 411, 443
PstNI CAGNNNCTG 1 cut(s) 1994
PsuI RGATCY 3 cut(s) 493, 538, 2121
PvuII CAGCTG 1 cut(s) 521
RsaI GTAC 7 cut(s) 186, 402, 429, 885, 1309, 1557, 1972
RsaNI GTAC 7 cut(s) 185, 401, 428, 884, 1308, 1556, 1971
RseI CAYNNNNRTG 5 cut(s) 69, 772, 963, 1487, 1880
SalI GTCGAC 1 cut(s) 1927
SapI GCTCTTC 2 cut(s) 504, 1109
SatI GCNGC 5 cut(s) 169, 1284, 1479, 1823, 1989
Sau96I GGNCC 3 cut(s) 578, 715, 1685
SchI GAGTC 2 cut(s) 43, 320
ScrFI CCNGG 4 cut(s) 718, 798, 1048, 1441
SduI GDGCHC 4 cut(s) 284, 516, 1352, 2142
SfaNI GCATC 4 cut(s) 135, 953, 1167, 1309
SinI GGWCC 2 cut(s) 578, 1685
SmiMI CAYNNNNRTG 5 cut(s) 69, 772, 963, 1487, 1880
SmlI CTYRAG 3 cut(s) 224, 1266, 1571
SmoI CTYRAG 3 cut(s) 224, 1266, 1571
SphI GCATGC 1 cut(s) 1463
SseBI AGGCCT 1 cut(s) 445
SsiI CCGC 2 cut(s) 101, 1061
SspMI CTAG 5 cut(s) 192, 438, 936, 1700, 2173
StuI AGGCCT 1 cut(s) 445
StyD4I CCNGG 4 cut(s) 716, 796, 1046, 1439
StyI CCWWGG 3 cut(s) 252, 1233, 1581
TaaI ACNGT 8 cut(s) 46, 405, 883, 1733, 1765, 1899, 1923, 2016
TaqI TCGA 7 cut(s) 9, 351, 1615, 1705, 1928, 1982, 2142
TfiI GAWTC 7 cut(s) 353, 553, 902, 1157, 1424, 1430, 1816
TscAI CASTG 7 cut(s) 49, 289, 706, 1135, 1426, 1999, 2030
TseFI GTSAC 5 cut(s) 312, 323, 1237, 1727, 2077
TseI GCWGC 5 cut(s) 168, 1283, 1478, 1822, 1988
Tsp45I GTSAC 5 cut(s) 312, 323, 1237, 1727, 2077
TspGWI ACGGA 3 cut(s) 388, 606, 1367
TspRI CASTG 7 cut(s) 49, 289, 706, 1135, 1426, 1999, 2030
Van91I CCANNNNNTGG 1 cut(s) 1053
Vha464I CTTAAG 2 cut(s) 224, 1571
VpaK11BI GGWCC 2 cut(s) 578, 1685
XapI RAATTY 1 cut(s) 483
XbaI TCTAGA 1 cut(s) 191
XceI RCATGY 2 cut(s) 1463, 1750
XmiI GTMKAC 3 cut(s) 97, 1085, 1928
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 5 cut(s) 192, 438, 936, 1700, 2173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.