RLG00000005656

Cell division cycle protein 27 homolog

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
625742 .. 627840
2099 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005656

Sequence Viewer

Length: 606 bp
ATGGGAACACAAGTGGCTCAATCACGCTACTTGTTTGCTATGTCATGCTATCAGATGAATCTTCTGAATGAGGCAGAAGCAGCATTATTCCCCCCTAATGAGCCTAGTGCAGAGGTTCCAAATGGCGCAGCAAGTCATTACCTTCTTGGGCTTATTTATAGGTATACTGATAGAAGGAAAAGTGCCATCCATCACTTTAAACAGGCTTTGACTATGGACCCTTCAATGTGGGCTGCGTATGAAGAGCTGTGCGTGCTAGGTTCTGCTGAAGAAGCAGCTGTGGTTTTTGGGGAAGCAGCTGCTCTCTCCATACAAAAACAGTACCTACATCATGGATTAGCTTCTCAAAGTTTACTCACCGTCAATGATGATTGCAATTTAGTTTCTGGAAGGAACTTTAGCTTTGAAGATGTTAGTCCAAGACAATTGAAACTAATGCAAGGCAGTAATACAAGAGATAGTTCTGGAAATTCTCATGTTATTTTAGGAGGAATTTCTGGTCAGCCTACAAACGGCAGTTCTAACATATCTTTCTATAACACTCCTTCACCAATGCCTATGCAGGTCATCAGCCAATACTCAGGGTTTAGAAAGGATTGGAAGTAA

Protein Analysis

202

Amino Acids

22.09

Weight (kDa)

6.04

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 553
AccI GTMKAC 1 cut(s) 164
AcsI RAATTY 2 cut(s) 469, 492
AcuI CTGAAG 1 cut(s) 288
AfaI GTAC 1 cut(s) 323
AfiI CCNNNNNNNGG 1 cut(s) 512
AgsI TTSAA 3 cut(s) 225, 407, 430
AluBI AGCT 5 cut(s) 247, 278, 299, 341, 402
AluI AGCT 5 cut(s) 247, 278, 299, 341, 402
ApeKI GCWGC 6 cut(s) 80, 128, 233, 275, 296, 299
ApoI RAATTY 2 cut(s) 469, 492
AspLEI GCGC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 217
AsuHPI GGTGA 2 cut(s) 349, 540
AvaII GGWCC 1 cut(s) 217
BbvI GCAGC 6 cut(s) 92, 140, 220, 286, 287, 308
BccI CCATC 2 cut(s) 194, 198
BceAI ACGGC 1 cut(s) 529
BfaI CTAG 2 cut(s) 105, 257
BfuAI ACCTGC 1 cut(s) 553
BisI GCNGC 6 cut(s) 81, 129, 234, 276, 297, 300
BlsI GCNGC 6 cut(s) 82, 130, 235, 277, 298, 301
Bme18I GGWCC 1 cut(s) 217
BmgT120I GGNCC 1 cut(s) 217
BmiI GGNNCC 2 cut(s) 117, 219
Bsc4I CCNNNNNNNGG 1 cut(s) 512
BseGI GGATG 1 cut(s) 186
BseLI CCNNNNNNNGG 1 cut(s) 512
BseMII CTCAG 1 cut(s) 594
BseXI GCAGC 6 cut(s) 92, 140, 220, 286, 287, 308
BsgI GTGCAG 1 cut(s) 129
BslI CCNNNNNNNGG 1 cut(s) 512
BspCNI CTCAG 1 cut(s) 593
BspLI GGNNCC 2 cut(s) 117, 219
BspMI ACCTGC 1 cut(s) 553
BspQI GCTCTTC 1 cut(s) 237
BssNAI GTATAC 1 cut(s) 165
Bst1107I GTATAC 1 cut(s) 165
Bst4CI ACNGT 2 cut(s) 321, 361
Bst6I CTCTTC 1 cut(s) 237
BstC8I GCNNGC 1 cut(s) 254
BstDEI CTNAG 1 cut(s) 580
BstF5I GGATG 1 cut(s) 186
BstHHI GCGC 1 cut(s) 128
BstMWI GCNNNNNNNGC 3 cut(s) 80, 253, 272
BstV1I GCAGC 6 cut(s) 92, 140, 220, 286, 287, 308
BstZ17I GTATAC 1 cut(s) 165
BtsCI GGATG 1 cut(s) 186
BveI ACCTGC 1 cut(s) 553
Cac8I GCNNGC 1 cut(s) 254
CfoI GCGC 1 cut(s) 128
Cfr13I GGNCC 1 cut(s) 217
Csp6I GTAC 1 cut(s) 322
CviAII CATG 3 cut(s) 45, 332, 476
CviQI GTAC 1 cut(s) 322
DdeI CTNAG 1 cut(s) 580
DraI TTTAAA 1 cut(s) 199
Eam1104I CTCTTC 1 cut(s) 237
EarI CTCTTC 1 cut(s) 237
Eco47I GGWCC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 288
FaeI CATG 3 cut(s) 48, 335, 479
FatI CATG 3 cut(s) 44, 331, 475
FblI GTMKAC 1 cut(s) 164
Fnu4HI GCNGC 6 cut(s) 81, 129, 234, 276, 297, 300
FokI GGATG 1 cut(s) 173
Fsp4HI GCNGC 6 cut(s) 81, 129, 234, 276, 297, 300
FspBI CTAG 2 cut(s) 105, 257
GlaI GCGC 1 cut(s) 127
GluI GCNGC 6 cut(s) 81, 129, 234, 276, 297, 300
HhaI GCGC 1 cut(s) 128
Hin1II CATG 3 cut(s) 48, 335, 479
Hin6I GCGC 1 cut(s) 126
HinP1I GCGC 1 cut(s) 126
HinfI GANTC 1 cut(s) 58
HphI GGTGA 2 cut(s) 349, 540
Hpy166II GTNNAC 2 cut(s) 165, 353
Hpy188I TCNGA 2 cut(s) 54, 66
Hpy188III TCNNGA 2 cut(s) 387, 465
Hpy8I GTNNAC 2 cut(s) 165, 353
HpyAV CCTTC 5 cut(s) 152, 168, 231, 384, 555
HpyCH4III ACNGT 2 cut(s) 321, 361
HpyCH4V TGCA 4 cut(s) 110, 375, 439, 562
HpyF10VI GCNNNNNNNGC 3 cut(s) 80, 253, 272
HpyF3I CTNAG 1 cut(s) 580
Hsp92II CATG 3 cut(s) 48, 335, 479
HspAI GCGC 1 cut(s) 126
LguI GCTCTTC 1 cut(s) 237
LpnPI CCDG 6 cut(s) 188, 372, 450, 483, 548, 567
Lsp1109I GCAGC 6 cut(s) 92, 140, 220, 286, 287, 308
MaeI CTAG 2 cut(s) 105, 257
MboII GAAGA 4 cut(s) 53, 254, 281, 419
MfeI CAATTG 1 cut(s) 425
MluCI AATT 4 cut(s) 376, 425, 469, 492
MnlI CCTC 3 cut(s) 64, 106, 482
MseI TTAA 1 cut(s) 198
MspA1I CMGCKG 2 cut(s) 278, 299
MunI CAATTG 1 cut(s) 425
MwoI GCNNNNNNNGC 3 cut(s) 80, 253, 272
NlaIII CATG 3 cut(s) 48, 335, 479
NlaIV GGNNCC 2 cut(s) 117, 219
PciSI GCTCTTC 1 cut(s) 237
PfeI GAWTC 1 cut(s) 58
PkrI GCNGC 6 cut(s) 82, 130, 235, 277, 298, 301
PspN4I GGNNCC 2 cut(s) 117, 219
PspPI GGNCC 1 cut(s) 217
PvuII CAGCTG 2 cut(s) 278, 299
RsaI GTAC 1 cut(s) 323
RsaNI GTAC 1 cut(s) 322
SapI GCTCTTC 1 cut(s) 237
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 6 cut(s) 81, 129, 234, 276, 297, 300
Sau96I GGNCC 1 cut(s) 217
SinI GGWCC 1 cut(s) 217
Sse9I AATT 4 cut(s) 376, 425, 469, 492
SspMI CTAG 2 cut(s) 105, 257
TaaI ACNGT 2 cut(s) 321, 361
TasI AATT 4 cut(s) 376, 425, 469, 492
TfiI GAWTC 1 cut(s) 58
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TseI GCWGC 6 cut(s) 80, 128, 233, 275, 296, 299
TspDTI ATGAA 2 cut(s) 71, 255
VpaK11BI GGWCC 1 cut(s) 217
XapI RAATTY 2 cut(s) 469, 492
XmiI GTMKAC 1 cut(s) 164
XspI CTAG 2 cut(s) 105, 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.