Cell division cycle protein 27 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000005656 RLG00000006020 RLG00000018533 RLG00000022775 RLG00000029073 |
| rosa_multiflora | Rmu_sc0027398.1_g000001 Rmu_ssc0000114.1_g000064 |
| rosa_roxburghii | Rroxscaffold_1G00014130 |
| rosa_samantha | Rh5CG127000 Rh5DG079800 Rh5DG110500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 194 |
| AccI | GTMKAC | 1 cut(s) | 236 |
| AciI | CCGC | 1 cut(s) | 66 |
| AcsI | RAATTY | 1 cut(s) | 16 |
| AcuI | CTGAAG | 1 cut(s) | 360 |
| AfaI | GTAC | 1 cut(s) | 395 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 491 |
| AgsI | TTSAA | 2 cut(s) | 297, 479 |
| AluBI | AGCT | 7 cut(s) | 32, 59, 319, 350, 368, 413, 474 |
| AluI | AGCT | 7 cut(s) | 32, 59, 319, 350, 368, 413, 474 |
| ApeKI | GCWGC | 6 cut(s) | 152, 200, 305, 347, 368, 371 |
| ApoI | RAATTY | 1 cut(s) | 16 |
| AspLEI | GCGC | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 2 cut(s) | 421, 519 |
| BbvI | GCAGC | 6 cut(s) | 164, 212, 292, 355, 358, 359 |
| BccI | CCATC | 2 cut(s) | 266, 270 |
| BceAI | ACGGC | 1 cut(s) | 508 |
| BfaI | CTAG | 2 cut(s) | 177, 329 |
| BfmI | CTRYAG | 1 cut(s) | 285 |
| BfuAI | ACCTGC | 1 cut(s) | 194 |
| BisI | GCNGC | 7 cut(s) | 66, 153, 201, 306, 348, 369, 372 |
| BlsI | GCNGC | 7 cut(s) | 67, 154, 202, 307, 349, 370, 373 |
| BmiI | GGNNCC | 1 cut(s) | 189 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 491 |
| BseGI | GGATG | 2 cut(s) | 41, 258 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 491 |
| BseXI | GCAGC | 6 cut(s) | 164, 212, 292, 355, 358, 359 |
| BsgI | GTGCAG | 1 cut(s) | 201 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 491 |
| BspACI | CCGC | 1 cut(s) | 66 |
| BspLI | GGNNCC | 1 cut(s) | 189 |
| BspMI | ACCTGC | 1 cut(s) | 194 |
| BspQI | GCTCTTC | 1 cut(s) | 309 |
| BssNAI | GTATAC | 1 cut(s) | 237 |
| Bst1107I | GTATAC | 1 cut(s) | 237 |
| Bst4CI | ACNGT | 2 cut(s) | 393, 433 |
| Bst6I | CTCTTC | 1 cut(s) | 309 |
| BstC8I | GCNNGC | 2 cut(s) | 326, 543 |
| BstF5I | GGATG | 2 cut(s) | 41, 258 |
| BstHHI | GCGC | 1 cut(s) | 200 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 65, 152, 325, 344 |
| BstSFI | CTRYAG | 1 cut(s) | 285 |
| BstV1I | GCAGC | 6 cut(s) | 164, 212, 292, 355, 358, 359 |
| BstZ17I | GTATAC | 1 cut(s) | 237 |
| BtsCI | GGATG | 2 cut(s) | 41, 258 |
| BveI | ACCTGC | 1 cut(s) | 194 |
| Cac8I | GCNNGC | 2 cut(s) | 326, 543 |
| CfoI | GCGC | 1 cut(s) | 200 |
| Csp6I | GTAC | 1 cut(s) | 394 |
| CviAII | CATG | 2 cut(s) | 117, 404 |
| CviQI | GTAC | 1 cut(s) | 394 |
| DraI | TTTAAA | 2 cut(s) | 81, 271 |
| Eam1104I | CTCTTC | 1 cut(s) | 309 |
| EarI | CTCTTC | 1 cut(s) | 309 |
| Eco57I | CTGAAG | 1 cut(s) | 360 |
| FaeI | CATG | 2 cut(s) | 120, 407 |
| FatI | CATG | 2 cut(s) | 116, 403 |
| FblI | GTMKAC | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 7 cut(s) | 66, 153, 201, 306, 348, 369, 372 |
| FokI | GGATG | 2 cut(s) | 48, 245 |
| Fsp4HI | GCNGC | 7 cut(s) | 66, 153, 201, 306, 348, 369, 372 |
| FspBI | CTAG | 2 cut(s) | 177, 329 |
| GlaI | GCGC | 1 cut(s) | 199 |
| GluI | GCNGC | 7 cut(s) | 66, 153, 201, 306, 348, 369, 372 |
| HhaI | GCGC | 1 cut(s) | 200 |
| Hin1II | CATG | 2 cut(s) | 120, 407 |
| Hin6I | GCGC | 1 cut(s) | 198 |
| HinP1I | GCGC | 1 cut(s) | 198 |
| HindIII | AAGCTT | 1 cut(s) | 57 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HphI | GGTGA | 2 cut(s) | 421, 519 |
| Hpy166II | GTNNAC | 2 cut(s) | 237, 425 |
| Hpy188I | TCNGA | 2 cut(s) | 126, 138 |
| Hpy188III | TCNNGA | 1 cut(s) | 459 |
| Hpy8I | GTNNAC | 2 cut(s) | 237, 425 |
| HpyAV | CCTTC | 5 cut(s) | 224, 240, 303, 456, 534 |
| HpyCH4III | ACNGT | 2 cut(s) | 393, 433 |
| HpyCH4V | TGCA | 5 cut(s) | 22, 46, 182, 447, 541 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 65, 152, 325, 344 |
| Hsp92II | CATG | 2 cut(s) | 120, 407 |
| HspAI | GCGC | 1 cut(s) | 198 |
| LguI | GCTCTTC | 1 cut(s) | 309 |
| LpnPI | CCDG | 5 cut(s) | 18, 189, 260, 444, 527 |
| Lsp1109I | GCAGC | 6 cut(s) | 164, 212, 292, 355, 358, 359 |
| MaeI | CTAG | 2 cut(s) | 177, 329 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MboII | GAAGA | 3 cut(s) | 125, 326, 353 |
| MfeI | CAATTG | 1 cut(s) | 23 |
| MluCI | AATT | 3 cut(s) | 16, 23, 448 |
| MnlI | CCTC | 2 cut(s) | 136, 178 |
| MseI | TTAA | 3 cut(s) | 80, 270, 553 |
| MspA1I | CMGCKG | 1 cut(s) | 350 |
| MunI | CAATTG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 65, 152, 325, 344 |
| NlaIII | CATG | 2 cut(s) | 120, 407 |
| NlaIV | GGNNCC | 1 cut(s) | 189 |
| PciSI | GCTCTTC | 1 cut(s) | 309 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PkrI | GCNGC | 7 cut(s) | 67, 154, 202, 307, 349, 370, 373 |
| PspN4I | GGNNCC | 1 cut(s) | 189 |
| PvuII | CAGCTG | 1 cut(s) | 350 |
| RsaI | GTAC | 1 cut(s) | 395 |
| RsaNI | GTAC | 1 cut(s) | 394 |
| SapI | GCTCTTC | 1 cut(s) | 309 |
| SaqAI | TTAA | 3 cut(s) | 80, 270, 553 |
| SatI | GCNGC | 7 cut(s) | 66, 153, 201, 306, 348, 369, 372 |
| SfcI | CTRYAG | 1 cut(s) | 285 |
| Sse9I | AATT | 3 cut(s) | 16, 23, 448 |
| SsiI | CCGC | 1 cut(s) | 66 |
| SspMI | CTAG | 2 cut(s) | 177, 329 |
| TaaI | ACNGT | 2 cut(s) | 393, 433 |
| TasI | AATT | 3 cut(s) | 16, 23, 448 |
| TauI | GCSGC | 1 cut(s) | 68 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 3 cut(s) | 80, 270, 553 |
| Tru9I | TTAA | 3 cut(s) | 80, 270, 553 |
| TseI | GCWGC | 6 cut(s) | 152, 200, 305, 347, 368, 371 |
| TspDTI | ATGAA | 2 cut(s) | 143, 327 |
| XapI | RAATTY | 1 cut(s) | 16 |
| XmiI | GTMKAC | 1 cut(s) | 236 |
| XspI | CTAG | 2 cut(s) | 177, 329 |