Cell division cycle protein 27 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000005656 RLG00000006020 RLG00000018533 RLG00000022775 RLG00000029073 |
| rosa_multiflora | Rmu_sc0027398.1_g000001 Rmu_ssc0000114.1_g000064 |
| rosa_roxburghii | Rroxscaffold_1G00014130 |
| rosa_samantha | Rh5CG127000 Rh5DG079800 Rh5DG110500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 203, 634 |
| AccI | GTMKAC | 1 cut(s) | 245 |
| AciI | CCGC | 1 cut(s) | 66 |
| AcsI | RAATTY | 2 cut(s) | 16, 550 |
| AcuI | CTGAAG | 1 cut(s) | 369 |
| AfaI | GTAC | 1 cut(s) | 404 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 593 |
| AgsI | TTSAA | 3 cut(s) | 306, 488, 511 |
| AluBI | AGCT | 7 cut(s) | 32, 59, 328, 359, 377, 422, 483 |
| AluI | AGCT | 7 cut(s) | 32, 59, 328, 359, 377, 422, 483 |
| ApeKI | GCWGC | 6 cut(s) | 161, 209, 314, 356, 377, 380 |
| ApoI | RAATTY | 2 cut(s) | 16, 550 |
| AspLEI | GCGC | 1 cut(s) | 209 |
| AsuHPI | GGTGA | 2 cut(s) | 430, 621 |
| BbvI | GCAGC | 6 cut(s) | 173, 221, 301, 364, 367, 368 |
| BccI | CCATC | 1 cut(s) | 275 |
| BceAI | ACGGC | 1 cut(s) | 610 |
| BfaI | CTAG | 3 cut(s) | 186, 338, 579 |
| BfmI | CTRYAG | 1 cut(s) | 294 |
| BfuAI | ACCTGC | 2 cut(s) | 203, 634 |
| BisI | GCNGC | 7 cut(s) | 66, 162, 210, 315, 357, 378, 381 |
| BlsI | GCNGC | 7 cut(s) | 67, 163, 211, 316, 358, 379, 382 |
| BmiI | GGNNCC | 1 cut(s) | 198 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 593 |
| BseGI | GGATG | 2 cut(s) | 41, 267 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 593 |
| BseMII | CTCAG | 1 cut(s) | 675 |
| BseRI | GAGGAG | 1 cut(s) | 585 |
| BseXI | GCAGC | 6 cut(s) | 173, 221, 301, 364, 367, 368 |
| BsgI | GTGCAG | 1 cut(s) | 210 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 593 |
| BspACI | CCGC | 1 cut(s) | 66 |
| BspCNI | CTCAG | 1 cut(s) | 674 |
| BspLI | GGNNCC | 1 cut(s) | 198 |
| BspMI | ACCTGC | 2 cut(s) | 203, 634 |
| BspQI | GCTCTTC | 1 cut(s) | 318 |
| BssNAI | GTATAC | 1 cut(s) | 246 |
| Bst1107I | GTATAC | 1 cut(s) | 246 |
| Bst4CI | ACNGT | 2 cut(s) | 402, 442 |
| Bst6I | CTCTTC | 1 cut(s) | 318 |
| BstC8I | GCNNGC | 1 cut(s) | 335 |
| BstDEI | CTNAG | 1 cut(s) | 661 |
| BstF5I | GGATG | 2 cut(s) | 41, 267 |
| BstHHI | GCGC | 1 cut(s) | 209 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 65, 161, 334, 353 |
| BstSFI | CTRYAG | 1 cut(s) | 294 |
| BstV1I | GCAGC | 6 cut(s) | 173, 221, 301, 364, 367, 368 |
| BstZ17I | GTATAC | 1 cut(s) | 246 |
| BtsCI | GGATG | 2 cut(s) | 41, 267 |
| BveI | ACCTGC | 2 cut(s) | 203, 634 |
| Cac8I | GCNNGC | 1 cut(s) | 335 |
| CfoI | GCGC | 1 cut(s) | 209 |
| Csp6I | GTAC | 1 cut(s) | 403 |
| CviAII | CATG | 3 cut(s) | 126, 413, 557 |
| CviQI | GTAC | 1 cut(s) | 403 |
| DdeI | CTNAG | 1 cut(s) | 661 |
| DraI | TTTAAA | 2 cut(s) | 81, 280 |
| Eam1104I | CTCTTC | 1 cut(s) | 318 |
| EarI | CTCTTC | 1 cut(s) | 318 |
| Eco57I | CTGAAG | 1 cut(s) | 369 |
| FaeI | CATG | 3 cut(s) | 129, 416, 560 |
| FatI | CATG | 3 cut(s) | 125, 412, 556 |
| FblI | GTMKAC | 1 cut(s) | 245 |
| Fnu4HI | GCNGC | 7 cut(s) | 66, 162, 210, 315, 357, 378, 381 |
| FokI | GGATG | 2 cut(s) | 48, 254 |
| Fsp4HI | GCNGC | 7 cut(s) | 66, 162, 210, 315, 357, 378, 381 |
| FspBI | CTAG | 3 cut(s) | 186, 338, 579 |
| GlaI | GCGC | 1 cut(s) | 208 |
| GluI | GCNGC | 7 cut(s) | 66, 162, 210, 315, 357, 378, 381 |
| HhaI | GCGC | 1 cut(s) | 209 |
| Hin1II | CATG | 3 cut(s) | 129, 416, 560 |
| Hin6I | GCGC | 1 cut(s) | 207 |
| HinP1I | GCGC | 1 cut(s) | 207 |
| HindIII | AAGCTT | 1 cut(s) | 57 |
| HinfI | GANTC | 1 cut(s) | 139 |
| HphI | GGTGA | 2 cut(s) | 430, 621 |
| Hpy166II | GTNNAC | 2 cut(s) | 246, 434 |
| Hpy188I | TCNGA | 2 cut(s) | 135, 147 |
| Hpy188III | TCNNGA | 2 cut(s) | 468, 546 |
| Hpy8I | GTNNAC | 2 cut(s) | 246, 434 |
| HpyAV | CCTTC | 7 cut(s) | 233, 249, 312, 465, 636, 676, 680 |
| HpyCH4III | ACNGT | 2 cut(s) | 402, 442 |
| HpyCH4V | TGCA | 6 cut(s) | 22, 46, 191, 456, 520, 643 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 65, 161, 334, 353 |
| HpyF3I | CTNAG | 1 cut(s) | 661 |
| Hsp92II | CATG | 3 cut(s) | 129, 416, 560 |
| HspAI | GCGC | 1 cut(s) | 207 |
| LguI | GCTCTTC | 1 cut(s) | 318 |
| LpnPI | CCDG | 7 cut(s) | 18, 198, 269, 453, 531, 629, 648 |
| Lsp1109I | GCAGC | 6 cut(s) | 173, 221, 301, 364, 367, 368 |
| MaeI | CTAG | 3 cut(s) | 186, 338, 579 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MboII | GAAGA | 4 cut(s) | 134, 335, 362, 500 |
| MfeI | CAATTG | 2 cut(s) | 23, 506 |
| MluCI | AATT | 5 cut(s) | 16, 23, 457, 506, 550 |
| MnlI | CCTC | 3 cut(s) | 145, 187, 563 |
| MseI | TTAA | 2 cut(s) | 80, 279 |
| MspA1I | CMGCKG | 1 cut(s) | 359 |
| MunI | CAATTG | 2 cut(s) | 23, 506 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 65, 161, 334, 353 |
| NlaIII | CATG | 3 cut(s) | 129, 416, 560 |
| NlaIV | GGNNCC | 1 cut(s) | 198 |
| PciSI | GCTCTTC | 1 cut(s) | 318 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| PkrI | GCNGC | 7 cut(s) | 67, 163, 211, 316, 358, 379, 382 |
| PspN4I | GGNNCC | 1 cut(s) | 198 |
| PvuII | CAGCTG | 1 cut(s) | 359 |
| RsaI | GTAC | 1 cut(s) | 404 |
| RsaNI | GTAC | 1 cut(s) | 403 |
| SapI | GCTCTTC | 1 cut(s) | 318 |
| SaqAI | TTAA | 2 cut(s) | 80, 279 |
| SatI | GCNGC | 7 cut(s) | 66, 162, 210, 315, 357, 378, 381 |
| SfcI | CTRYAG | 1 cut(s) | 294 |
| Sse9I | AATT | 5 cut(s) | 16, 23, 457, 506, 550 |
| SsiI | CCGC | 1 cut(s) | 66 |
| SspMI | CTAG | 3 cut(s) | 186, 338, 579 |
| TaaI | ACNGT | 2 cut(s) | 402, 442 |
| TasI | AATT | 5 cut(s) | 16, 23, 457, 506, 550 |
| TauI | GCSGC | 1 cut(s) | 68 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| Tru1I | TTAA | 2 cut(s) | 80, 279 |
| Tru9I | TTAA | 2 cut(s) | 80, 279 |
| TseI | GCWGC | 6 cut(s) | 161, 209, 314, 356, 377, 380 |
| TspDTI | ATGAA | 2 cut(s) | 152, 336 |
| XapI | RAATTY | 2 cut(s) | 16, 550 |
| XmiI | GTMKAC | 1 cut(s) | 245 |
| XspI | CTAG | 3 cut(s) | 186, 338, 579 |