Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0005308

Physical Location & Seq

Genomic Coordinates Reverse (-)

14539029 .. 14545207

Gene Structure 6179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007205

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2715 bp

ATGTCTCAGCTCAGAGCTTCCTCTAAAGCAAAGGAGTCTCAAACTCCAACTCAAAGACCCTCGAGAGCAAAATCAGTGACTCCAGATGTGAGTAATAGCAGTGATTCCAGGAGTATTAGGAGGGCTGTTCTGCAAAACAAGCCTAAATCTGGAGAACTGGTGTTGGGATCTCAGAAAAGTAAGGAACTTGAGGAGTTCAGAGTTGTGGGTAGTAGTAGGAAGCCCCAAGTTGTGGAGCAATTTGCTAAGCCCAGAAGGCAGAGGCCTGTTGTGGAGGCCAATTGTAAGAGAAATGAGGATGACCCACATCAGAAAGTGAAGGACTTGCAGGAAAAAATTGGAGTGAGTGAGAGTTTGATCATGAATTTGCAGGCTGAGGTTTTGGGATTGAAGGCAGAGTTGGGTAAGGAACAGGGGATGAACCTGGAGCTGCAGTCACAGAATAAAAAGCTTAGTGAGAATCTTGCTGCTGCTGAAGCAAAGATTGCAGCTTTAACCACTCCTCAACAGAGGGAGTCAAATGGCTACCAGAGTCCTAAATTCAAAGACCTTCAGAAACTCATTGCCAACAAATTAGAAAGCTCAGTAGTAAAGAAAGAGCCAGTGAATGAATCAAGTCCTATTAAAGTAGCATCACCCCCACCGCCACCACCACCTGTAATTCCTCGAGTTGCAGCCACCTTTTCACCACCTCCACCTCCTCCACCGCCATCACTCCGGGCACCACCACCGCCTCCACCTCGGCCCTCGGCGAGGGTGTCAACCACTCAGAAGGCTCCAGAGCTTGTACAGTTTTATCACTCCTTGAGGAAGCAAGAGGTGAAGAGGGACTCTCCAGAATCTAGAAACCATCATAAACCAGGGGCTATTAGTGCACATAATAGCATAGTTGGCGAAATTCAAAATCGATCAGCACATCTGCTAGCCATAAAAGCAGATGTTGAATCAAAAGGAGAGTTCATCAATGGCCTTATCCAGAGGGTTCTGGCTGCTGCCTATACAGATATTGAGGATGTTCTAAAATTTGTGCATTGGCTCGATGGAGAACTTGCATCGTTGGCTGATGAACGTGCTGTATTAAAGCACTTTAAGTGGCCAGAGAGGAAAGCTGATGCCATGCGAGAAGCTGCAATAGAATATCGTGACCTTAAACAGTTGGAAAGTGAAATTTCTTCGTATAAGGATGACACCACCATTCAATGTGCAGCTGCCTTGAAGAAGATGGCTGCCTTATTAGACAAGTCGGAGCAAAGCATTCAAAGGTTAGTCAAGTTGAGAAATTCAGTTATGCGTTCTTATCAGGAATGCAAAATTCCAACTGACTGGATGCTTGATTCAGGGATTGTGAGTAAGATAAAGCTGGCTTCCATGAATTTGGCTAAAATTTACATGAAGAGAGTTACATTGGAGCTTGAATCCATTCGGTATTCAGATAGAGAATCAAGTCAAGAATCTCTTCTGGTTCAAGGCGTGAATTTTGCTTACAGGGCACACCAGTTTGCTGGAGGTCTCGACTCTGAAACATTATGCGCTTTCGAAGAGATAAGACAACGAGTACCAAGACATTTAGGAGCATACGTGGCGCCACTTGGCGTAGATCTACACCGTCGAATCCAACCGACGGTGACCGTTTACCCAATTCGCGTGGTAACTGAAACGGTCACAAGCCTCCAACCGCTCCCCACGAGCAGGCACCACGTCATCAACTGCCAATCAAACACGCGCACGTTGACAGTCCCTTCTTCTCTTCCTCTGCAATACAAGAAAGCTACCCACACAAAACCAGCGGTGGTTCAAATTCACGAGACCATTCTCTTACTGCTTCCGCGCTGCAAAATTTTTGACAAGGGCTTTCAAATCTCAGCTTCGAAGGTCATATCTATGGAGGTTTCTGGATTAGTTTCCCGCCAAGTTCCGTGCTTTTCCGGCGCCGGAATCGATACCCGGTCTGCAAAGTCATCGTTTTCCAGCGACGTCCACTTTCTGGGTCGTAATGAATTTGGAGAAGGTGCAGAAGCATTGCTACAGCAATTGGAACAGGTAAGAGCTGAGGAGAAGGAGTTGAAGAAAAAGAAGAAAGAAGAGAAAGCGAGGCTTAAAGCCGAGCGGATGAAAACCATGAAGGACTGTGAATCGTCATCTTCATCGTCTTCATCTGAGTCGAGTGAGAGTGAATGTGGGGAGGTGATTGACATGAACAGGCTGACAGGTGAGGTCCCTGCGCAACCGATACTAGAGGGTTTGCAGCCATCGACCCAAGGAGGGCCGGCATTATTGACCCAGCCGAGTTCGGTAACCACACTTCAAGAAAATGAATGCTGCACTGGAACTAGTACTAGTTGTGGCAGCAGTGATAGTATTGGTCCTAACAATGCGGCTAGTAGCTCAGTTATGGAAGCATCTGTTGTGACGAAGATTGAAGTATGCATGGGCAAAAAGTGCAAGACATCAGGAGGTGTAGCATTGTTGGAAGAATTCGAGAGGTTGATGGGTGTCGAAGGAAGTGTTGTTGGGTGCAAGTGTATGGGAAAATGCAAAAATGGTCCAAATGTAAGGGTTTTGAATTCTCTGGAATCCGAAGAAGGAACAGAGGACTCTGTAAGGAATCCCACTAATCCTTTGTACATTGGAGTGGGACTGGAAGATGTGAGCCTCATCGTGGCCAACTTAATGGGAGAAGTCAAAAAGGATTTGGGGCTTGCCACTGCAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

905

Amino Acids

99.12

Weight (kDa)

8.95

Isoelectric Point (pI)

54.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48280
fragaria_vesca	FvH4_4g21640 FvH4_4g21640 FvH4_4g21640 FvH4_4g21640 FvH4_4g21640 FvH4_4g21640 FvH4_4g21640
malus_domestica	MD13G1138500.v1.1 MD16G1134400.v1.1
prunus_persica	Prupe.1G103700_v2.0.a1 Prupe.1G103700_v2.0.a1 Prupe.1G103700_v2.0.a1 Prupe.1G103700_v2.0.a1 Prupe.1G103700_v2.0.a1 Prupe.1G103700_v2.0.a1 Prupe.1G103700_v2.0.a1
pyrus_communis	pycom13g12060 pycom16g11870
rosa_chinensis	RchiOBHm_Chr4g0427871
rosa_laevigata	RLG00000007205
rosa_roxburghii	Rroxscaffold_5G00369520
rosa_rugosa	Rorug04G0220200 Rorug04G0220200
rosa_samantha	Rh4AG277100 Rh4BG282800 Rh4CG298500 Rh4DG279900
rosa_wichuraiana	Rw4G024070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1977
Acc16I	TGCGCA	1 cut(s)	2223
AccB1I	GGYRCC	4 cut(s)	721, 1582, 1692, 1928
AccB7I	CCANNNNNTGG	2 cut(s)	232, 1984
AccBSI	CCGCTC	2 cut(s)	1678, 2107
AccII	CGCG	3 cut(s)	1644, 1723, 1828
AciI	CCGC	9 cut(s)	644, 707, 731, 1676, 1787, 1826, 1906, 2107, 2375
AclWI	GGATC	1 cut(s)	175
AcoI	YGGCCR	2 cut(s)	1094, 2661
AcuI	CTGAAG	2 cut(s)	495, 536
AcyI	GRCGYC	3 cut(s)	1583, 1929, 1974
AfaI	GTAC	4 cut(s)	789, 1557, 2335, 2624
AfiI	CCNNNNNNNGG	8 cut(s)	149, 232, 753, 1621, 1689, 1984, 2262, 2659
AhlI	ACTAGT	2 cut(s)	2330, 2336
AjiI	CACGTC	1 cut(s)	1699
AjnI	CCWGG	3 cut(s)	107, 423, 859
AjuI	GAANNNNNNNTTGG	2 cut(s)	383, 415
Alw21I	GWGCWC	1 cut(s)	877
Alw26I	GTCTC	4 cut(s)	9, 42, 1514, 1799
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	1 cut(s)	175
Ama87I	CYCGRG	2 cut(s)	61, 666
AoxI	GGCC	7 cut(s)	263, 276, 743, 967, 1094, 2264, 2661
ApaLI	GTGCAC	1 cut(s)	873
Asp700I	GAANNNNTTC	2 cut(s)	1419, 1455
AspLEI	GCGC	6 cut(s)	1532, 1585, 1725, 1830, 1931, 2224
AspS9I	GGNCC	5 cut(s)	744, 2215, 2264, 2363, 2543
AsuC2I	CCSGG	2 cut(s)	719, 1945
AsuHPI	GGTGA	6 cut(s)	627, 678, 832, 1636, 2197, 2222
AsuII	TTCGAA	2 cut(s)	1536, 1868
AsuNHI	GCTAGC	1 cut(s)	922
AvaI	CYCGRG	2 cut(s)	61, 666
AvaII	GGWCC	3 cut(s)	2215, 2363, 2543
BaeGI	GKGCMC	3 cut(s)	724, 877, 1492
BalI	TGGCCA	2 cut(s)	1096, 2663
BanI	GGYRCC	4 cut(s)	721, 1582, 1692, 1928
BarI	GAAGNNNNNNTAC	4 cut(s)	2007, 2039, 2286, 2318
BauI	CACGAG	2 cut(s)	1684, 1802
BbsI	GAAGAC	1 cut(s)	2142
Bbv12I	GWGCWC	1 cut(s)	877
BbvCI	CCTCAGC	2 cut(s)	375, 2049
BccI	CCATC	6 cut(s)	718, 858, 1034, 1216, 2257, 2482
BcgI	CGANNNNNNTGC	2 cut(s)	1941, 1975
BciT130I	CCWGG	3 cut(s)	109, 425, 861
BclI	TGATCA	1 cut(s)	357
BcnI	CCSGG	2 cut(s)	719, 1945
BcoDI	GTCTC	4 cut(s)	9, 42, 1514, 1799
BcuI	ACTAGT	2 cut(s)	2330, 2336
BfaI	CTAG	6 cut(s)	843, 923, 2234, 2331, 2337, 2379
BfmI	CTRYAG	2 cut(s)	431, 2024
BfoI	RGCGCY	2 cut(s)	1586, 1932
BglI	GCCNNNNNGGC	1 cut(s)	256
BglII	AGATCT	1 cut(s)	1597
BlpI	GCTNAGC	1 cut(s)	246
BmcAI	AGTACT	1 cut(s)	2335
Bme1390I	CCNGG	5 cut(s)	109, 425, 719, 861, 1945
Bme18I	GGWCC	3 cut(s)	2215, 2363, 2543
BmeT110I	CYCGRG	2 cut(s)	61, 666
BmgBI	CACGTC	1 cut(s)	1699
BmgT120I	GGNCC	5 cut(s)	744, 2215, 2264, 2363, 2543
BmiI	GGNNCC	6 cut(s)	723, 777, 1584, 1694, 1930, 2217
BmrFI	CCNGG	5 cut(s)	109, 425, 719, 861, 1945
BmsI	GCATC	5 cut(s)	641, 1061, 1102, 1317, 2408
BmtI	GCTAGC	1 cut(s)	926
BpiI	GAAGAC	1 cut(s)	2142
BplI	GAGNNNNNCTC	2 cut(s)	817, 849
BpmI	CTGGAG	6 cut(s)	66, 171, 446, 762, 819, 1524
Bpu10I	CCTNAGC	2 cut(s)	375, 2049
Bpu1102I	GCTNAGC	1 cut(s)	246
Bpu14I	TTCGAA	2 cut(s)	1536, 1868
BpuEI	CTTGAG	2 cut(s)	209, 826
BpuMI	CCSGG	2 cut(s)	719, 1945
Bsa29I	ATCGAT	2 cut(s)	907, 1938
BsaAI	YACGTR	1 cut(s)	1579
BsaHI	GRCGYC	3 cut(s)	1583, 1929, 1974
BsaI	GGTCTC	2 cut(s)	1514, 1799
BsaJI	CCNNGG	4 cut(s)	740, 747, 860, 2257
BsaXI	ACNNNNNCTCC	8 cut(s)	144, 174, 419, 449, 1563, 1593, 2045, 2075
Bsc4I	CCNNNNNNNGG	8 cut(s)	149, 232, 753, 1621, 1689, 1984, 2262, 2659
Bse118I	RCCGGY	1 cut(s)	2266
Bse1I	ACTGG	6 cut(s)	162, 602, 1328, 1495, 2329, 2643
Bse3DI	GCAATG	2 cut(s)	561, 2018
BseBI	CCWGG	3 cut(s)	109, 425, 861
BseCI	ATCGAT	2 cut(s)	907, 1938
BseDI	CCNNGG	4 cut(s)	740, 747, 860, 2257
BseGI	GGATG	6 cut(s)	304, 423, 1018, 1189, 1332, 2115
BseLI	CCNNNNNNNGG	8 cut(s)	149, 232, 753, 1621, 1689, 1984, 2262, 2659
BseMI	GCAATG	2 cut(s)	561, 2018
BseNI	ACTGG	6 cut(s)	162, 602, 1328, 1495, 2329, 2643
BseRI	GAGGAG	4 cut(s)	206, 492, 690, 2066
BseSI	GKGCMC	3 cut(s)	724, 877, 1492
BseYI	CCCAGC	1 cut(s)	2280
BsgI	GTGCAG	3 cut(s)	1224, 2031, 2305
Bsh1236I	CGCG	3 cut(s)	1644, 1723, 1828
BshFI	GGCC	7 cut(s)	265, 278, 745, 969, 1096, 2266, 2663
BshNI	GGYRCC	4 cut(s)	721, 1582, 1692, 1928
BshVI	ATCGAT	2 cut(s)	907, 1938
BsiHKAI	GWGCWC	1 cut(s)	877
BsiHKCI	CYCGRG	2 cut(s)	61, 666
BsiSI	CCGG	5 cut(s)	718, 1926, 1932, 1945, 2267
BslFI	GGGAC	4 cut(s)	842, 1721, 2201, 2649
BslI	CCNNNNNNNGG	8 cut(s)	149, 232, 753, 1621, 1689, 1984, 2262, 2659
BsmAI	GTCTC	4 cut(s)	9, 42, 1514, 1799
BsmFI	GGGAC	4 cut(s)	842, 1721, 2201, 2649
BsmI	GAATGC	3 cut(s)	1254, 1310, 2321
BsnI	GGCC	7 cut(s)	265, 278, 745, 969, 1096, 2266, 2663
Bso31I	GGTCTC	2 cut(s)	1514, 1799
BsoBI	CYCGRG	2 cut(s)	61, 666
Bsp119I	TTCGAA	2 cut(s)	1536, 1868
Bsp1286I	GDGCHC	3 cut(s)	724, 877, 1492
Bsp1407I	TGTACA	2 cut(s)	787, 2622
Bsp143I	GATC	4 cut(s)	167, 357, 908, 1597
Bsp1720I	GCTNAGC	1 cut(s)	246
BspACI	CCGC	9 cut(s)	644, 707, 731, 1676, 1787, 1826, 1906, 2107, 2375
BspANI	GGCC	7 cut(s)	265, 278, 745, 969, 1096, 2266, 2663
BspDI	ATCGAT	2 cut(s)	907, 1938
BspFNI	CGCG	3 cut(s)	1644, 1723, 1828
BspHI	TCATGA	1 cut(s)	360
BspLI	GGNNCC	6 cut(s)	723, 777, 1584, 1694, 1930, 2217
BspMAI	CTGCAG	1 cut(s)	435
BspOI	GCTAGC	1 cut(s)	926
BspPI	GGATC	1 cut(s)	175
BspT104I	TTCGAA	2 cut(s)	1536, 1868
BspT107I	GGYRCC	4 cut(s)	721, 1582, 1692, 1928
BspTNI	GGTCTC	2 cut(s)	1514, 1799
BsrBI	CCGCTC	2 cut(s)	1678, 2107
BsrDI	GCAATG	2 cut(s)	561, 2018
BsrFI	RCCGGY	1 cut(s)	2266
BsrGI	TGTACA	2 cut(s)	787, 2622
BsrI	ACTGG	6 cut(s)	162, 602, 1328, 1495, 2329, 2643
BssAI	RCCGGY	1 cut(s)	2266
BssECI	CCNNGG	4 cut(s)	740, 747, 860, 2257
BssMI	GATC	4 cut(s)	167, 357, 908, 1597
BssNI	GRCGYC	3 cut(s)	1583, 1929, 1974
BssSI	CACGAG	2 cut(s)	1684, 1802
BssT1I	CCWWGG	1 cut(s)	2257
Bst2BI	CACGAG	2 cut(s)	1684, 1802
Bst2UI	CCWGG	3 cut(s)	109, 425, 861
Bst4CI	ACNGT	8 cut(s)	792, 1155, 1607, 1624, 1630, 1660, 1735, 2129
Bst6I	CTCTTC	6 cut(s)	818, 1388, 1461, 1533, 1752, 2076
BstACI	GRCGYC	3 cut(s)	1583, 1929, 1974
BstAPI	GCANNNNNTGC	2 cut(s)	485, 2439
BstAUI	TGTACA	2 cut(s)	787, 2622
BstBAI	YACGTR	1 cut(s)	1579
BstBI	TTCGAA	2 cut(s)	1536, 1868
BstC8I	GCNNGC	6 cut(s)	372, 924, 1362, 1691, 2268, 2700
BstEII	GGTNACC	2 cut(s)	1624, 2293
BstENI	CCTNNNNNAGG	1 cut(s)	751
BstF5I	GGATG	6 cut(s)	304, 423, 1018, 1189, 1332, 2115
BstFNI	CGCG	3 cut(s)	1644, 1723, 1828
BstH2I	RGCGCY	2 cut(s)	1586, 1932
BstHHI	GCGC	6 cut(s)	1532, 1585, 1725, 1830, 1931, 2224
BstKTI	GATC	4 cut(s)	170, 360, 911, 1600
BstMAI	GTCTC	4 cut(s)	9, 42, 1514, 1799
BstMBI	GATC	4 cut(s)	167, 357, 908, 1597
BstNI	CCWGG	3 cut(s)	109, 425, 861
BstPI	GGTNACC	2 cut(s)	1624, 2293
BstSCI	CCNGG	5 cut(s)	107, 423, 717, 859, 1943
BstSFI	CTRYAG	2 cut(s)	431, 2024
BstSLI	GKGCMC	3 cut(s)	724, 877, 1492
BstUI	CGCG	3 cut(s)	1644, 1723, 1828
BstV2I	GAAGAC	1 cut(s)	2142
BstX2I	RGATCY	2 cut(s)	167, 1597
BstXI	CCANNNNNNTGG	4 cut(s)	1323, 1375, 1502, 2671
BstYI	RGATCY	2 cut(s)	167, 1597
Bsu15I	ATCGAT	2 cut(s)	907, 1938
BsuRI	GGCC	7 cut(s)	265, 278, 745, 969, 1096, 2266, 2663
BsuTUI	ATCGAT	2 cut(s)	907, 1938
BtrI	CACGTC	1 cut(s)	1699
BtsCI	GGATG	6 cut(s)	304, 423, 1018, 1189, 1332, 2115
BtsI	GCAGTG	3 cut(s)	106, 2356, 2703
BtsIMutI	CAGTG	6 cut(s)	81, 106, 609, 2322, 2356, 2703
Cac8I	GCNNGC	6 cut(s)	372, 924, 1362, 1691, 2268, 2700
CciI	TCATGA	1 cut(s)	360
CfoI	GCGC	6 cut(s)	1532, 1585, 1725, 1830, 1931, 2224
Cfr10I	RCCGGY	1 cut(s)	2266
Cfr13I	GGNCC	5 cut(s)	744, 2215, 2264, 2363, 2543
ClaI	ATCGAT	2 cut(s)	907, 1938
Csp6I	GTAC	4 cut(s)	788, 1556, 2334, 2623
CspCI	CAANNNNNGTGG	2 cut(s)	1626, 1661
CviAII	CATG	7 cut(s)	361, 1117, 1369, 1390, 2119, 2194, 2428
CviQI	GTAC	4 cut(s)	788, 1556, 2334, 2623
DinI	GGCGCC	2 cut(s)	1584, 1930
DpnI	GATC	4 cut(s)	169, 359, 910, 1599
DpnII	GATC	4 cut(s)	167, 357, 908, 1597
EaeI	YGGCCR	2 cut(s)	1094, 2661
Eam1104I	CTCTTC	6 cut(s)	818, 1388, 1461, 1533, 1752, 2076
EarI	CTCTTC	6 cut(s)	818, 1388, 1461, 1533, 1752, 2076
Eco130I	CCWWGG	1 cut(s)	2257
Eco147I	AGGCCT	1 cut(s)	265
Eco31I	GGTCTC	2 cut(s)	1514, 1799
Eco47I	GGWCC	3 cut(s)	2215, 2363, 2543
Eco57I	CTGAAG	2 cut(s)	495, 536
Eco88I	CYCGRG	2 cut(s)	61, 666
Eco91I	GGTNACC	2 cut(s)	1624, 2293
EcoNI	CCTNNNNNAGG	1 cut(s)	751
EcoO109I	RGGNCCY	1 cut(s)	2215
EcoO65I	GGTNACC	2 cut(s)	1624, 2293
EcoRI	GAATTC	2 cut(s)	2474, 2563
EcoRII	CCWGG	3 cut(s)	107, 423, 859
EcoT14I	CCWWGG	1 cut(s)	2257
EcoT22I	ATGCAT	1 cut(s)	2429
EgeI	GGCGCC	2 cut(s)	1584, 1930
EheI	GGCGCC	2 cut(s)	1584, 1930
ErhI	CCWWGG	1 cut(s)	2257
FaeI	CATG	7 cut(s)	364, 1120, 1372, 1393, 2122, 2197, 2431
FalI	AAGNNNNNCTT	4 cut(s)	1440, 1472, 2079, 2111
FaqI	GGGAC	4 cut(s)	842, 1721, 2201, 2649
FatI	CATG	7 cut(s)	360, 1116, 1368, 1389, 2118, 2193, 2427
FauI	CCCGC	1 cut(s)	1913
FbaI	TGATCA	1 cut(s)	357
FokI	GGATG	6 cut(s)	311, 430, 1025, 1196, 1339, 2122
FspBI	CTAG	6 cut(s)	843, 923, 2234, 2331, 2337, 2379
FspI	TGCGCA	1 cut(s)	2223
GlaI	GCGC	6 cut(s)	1531, 1584, 1724, 1829, 1930, 2223
GsaI	CCCAGC	1 cut(s)	2284
GsuI	CTGGAG	6 cut(s)	66, 171, 446, 762, 819, 1524
HaeII	RGCGCY	2 cut(s)	1586, 1932
HaeIII	GGCC	7 cut(s)	265, 278, 745, 969, 1096, 2266, 2663
HapII	CCGG	5 cut(s)	718, 1926, 1932, 1945, 2267
HhaI	GCGC	6 cut(s)	1532, 1585, 1725, 1830, 1931, 2224
Hin1I	GRCGYC	3 cut(s)	1583, 1929, 1974
Hin1II	CATG	7 cut(s)	364, 1120, 1372, 1393, 2122, 2197, 2431
Hin6I	GCGC	6 cut(s)	1530, 1583, 1723, 1828, 1929, 2222
HinP1I	GCGC	6 cut(s)	1530, 1583, 1723, 1828, 1929, 2222
HincII	GTYRAC	2 cut(s)	762, 1731
HindII	GTYRAC	2 cut(s)	762, 1731
HindIII	AAGCTT	1 cut(s)	449
HpaII	CCGG	5 cut(s)	718, 1926, 1932, 1945, 2267
HphI	GGTGA	6 cut(s)	627, 678, 832, 1636, 2197, 2222
Hpy166II	GTNNAC	5 cut(s)	762, 875, 1633, 1731, 1978
Hpy8I	GTNNAC	5 cut(s)	762, 875, 1633, 1731, 1978
Hpy99I	CGWCG	3 cut(s)	1611, 1624, 1976
HpyCH4III	ACNGT	8 cut(s)	792, 1155, 1607, 1624, 1630, 1660, 1735, 2129
HpyCH4IV	ACGT	5 cut(s)	1069, 1578, 1698, 1727, 1974
HpySE526I	ACGT	5 cut(s)	1069, 1578, 1698, 1727, 1974
Hsp92I	GRCGYC	3 cut(s)	1583, 1929, 1974
Hsp92II	CATG	7 cut(s)	364, 1120, 1372, 1393, 2122, 2197, 2431
HspAI	GCGC	6 cut(s)	1530, 1583, 1723, 1828, 1929, 2222
KasI	GGCGCC	2 cut(s)	1582, 1928
KroI	GCCGGC	1 cut(s)	2266
KroNI	GCCGGC	1 cut(s)	2268
Ksp22I	TGATCA	1 cut(s)	357
Kzo9I	GATC	4 cut(s)	167, 357, 908, 1597
LmnI	GCTCC	7 cut(s)	235, 427, 781, 1246, 1408, 1571, 1683
LweI	GCATC	5 cut(s)	641, 1061, 1102, 1317, 2408
MaeI	CTAG	6 cut(s)	843, 923, 2234, 2331, 2337, 2379
MaeII	ACGT	5 cut(s)	1069, 1578, 1698, 1727, 1974
MaeIII	GTNAC	9 cut(s)	76, 435, 1142, 1399, 1624, 1648, 1660, 2293, 2407
MalI	GATC	4 cut(s)	169, 359, 910, 1599
MbiI	CCGCTC	2 cut(s)	1678, 2107
MboI	GATC	4 cut(s)	167, 357, 908, 1597
MfeI	CAATTG	2 cut(s)	280, 2030
MflI	RGATCY	2 cut(s)	167, 1597
MhlI	GDGCHC	3 cut(s)	724, 877, 1492
MlsI	TGGCCA	2 cut(s)	1096, 2663
MluNI	TGGCCA	2 cut(s)	1096, 2663
Mly113I	GGCGCC	2 cut(s)	1583, 1929
MlyI	GAGTC	8 cut(s)	44, 73, 524, 541, 824, 1508, 2168, 2588
MmeI	TCCRAC	7 cut(s)	71, 1137, 1224, 1340, 1639, 1696, 2448
Mox20I	TGGCCA	2 cut(s)	1096, 2663
Mph1103I	ATGCAT	1 cut(s)	2429
MroNI	GCCGGC	1 cut(s)	2266
MroXI	GAANNNNTTC	2 cut(s)	1419, 1455
MscI	TGGCCA	2 cut(s)	1096, 2663
MseI	TTAA	7 cut(s)	494, 624, 1079, 1089, 1149, 2097, 2669
MslI	CAYNNNNRTG	2 cut(s)	1880, 2630
Msp20I	TGGCCA	2 cut(s)	1096, 2663
MspA1I	CMGCKG	2 cut(s)	1208, 1787
MspI	CCGG	5 cut(s)	718, 1926, 1932, 1945, 2267
MspR9I	CCNGG	5 cut(s)	109, 425, 719, 861, 1945
MunI	CAATTG	2 cut(s)	280, 2030
Mva1269I	GAATGC	3 cut(s)	1254, 1310, 2321
MvaI	CCWGG	3 cut(s)	109, 425, 861
MvnI	CGCG	3 cut(s)	1644, 1723, 1828
NaeI	GCCGGC	1 cut(s)	2268
NarI	GGCGCC	2 cut(s)	1583, 1929
NciI	CCSGG	2 cut(s)	719, 1945
NdeII	GATC	4 cut(s)	167, 357, 908, 1597
NgoMIV	GCCGGC	1 cut(s)	2266
NheI	GCTAGC	1 cut(s)	922
NlaIII	CATG	7 cut(s)	364, 1120, 1372, 1393, 2122, 2197, 2431
NlaIV	GGNNCC	6 cut(s)	723, 777, 1584, 1694, 1930, 2217
NmeAIII	GCCGAG	4 cut(s)	721, 728, 2128, 2310
NmuCI	GTSAC	6 cut(s)	76, 435, 1142, 1624, 1660, 2407
NsbI	TGCGCA	1 cut(s)	2223
NsiI	ATGCAT	1 cut(s)	2429
NspV	TTCGAA	2 cut(s)	1536, 1868
PaeR7I	CTCGAG	2 cut(s)	61, 666
PagI	TCATGA	1 cut(s)	360
PceI	AGGCCT	1 cut(s)	265
PctI	GAATGC	3 cut(s)	1254, 1310, 2321
PdiI	GCCGGC	1 cut(s)	2268
PdmI	GAANNNNTTC	2 cut(s)	1419, 1455
PflMI	CCANNNNNTGG	2 cut(s)	232, 1984
PfoI	TCCNGGA	1 cut(s)	107
PleI	GAGTC	8 cut(s)	43, 73, 523, 540, 824, 1508, 2167, 2588
PluTI	GGCGCC	2 cut(s)	1586, 1932
PpsI	GAGTC	8 cut(s)	43, 73, 523, 540, 824, 1508, 2167, 2588
Ppu21I	YACGTR	1 cut(s)	1579
PpuMI	RGGWCCY	1 cut(s)	2215
Psp5II	RGGWCCY	1 cut(s)	2215
Psp6I	CCWGG	3 cut(s)	107, 423, 859
PspEI	GGTNACC	2 cut(s)	1624, 2293
PspFI	CCCAGC	1 cut(s)	2280
PspGI	CCWGG	3 cut(s)	107, 423, 859
PspN4I	GGNNCC	6 cut(s)	723, 777, 1584, 1694, 1930, 2217
PspPI	GGNCC	5 cut(s)	744, 2215, 2264, 2363, 2543
PspPPI	RGGWCCY	1 cut(s)	2215
PspXI	VCTCGAGB	1 cut(s)	666
PstI	CTGCAG	1 cut(s)	435
PsuI	RGATCY	2 cut(s)	167, 1597
PvuII	CAGCTG	1 cut(s)	1208
RsaI	GTAC	4 cut(s)	789, 1557, 2335, 2624
RsaNI	GTAC	4 cut(s)	788, 1556, 2334, 2623
RseI	CAYNNNNRTG	2 cut(s)	1880, 2630
SaqAI	TTAA	7 cut(s)	494, 624, 1079, 1089, 1149, 2097, 2669
Sau3AI	GATC	4 cut(s)	167, 357, 908, 1597
Sau96I	GGNCC	5 cut(s)	744, 2215, 2264, 2363, 2543
ScaI	AGTACT	1 cut(s)	2335
SchI	GAGTC	8 cut(s)	44, 73, 524, 541, 824, 1508, 2168, 2588
ScrFI	CCNGG	5 cut(s)	109, 425, 719, 861, 1945
SduI	GDGCHC	3 cut(s)	724, 877, 1492
SfaNI	GCATC	5 cut(s)	641, 1061, 1102, 1317, 2408
SfcI	CTRYAG	2 cut(s)	431, 2024
SfoI	GGCGCC	2 cut(s)	1584, 1930
Sfr274I	CTCGAG	2 cut(s)	61, 666
SfuI	TTCGAA	2 cut(s)	1536, 1868
SinI	GGWCC	3 cut(s)	2215, 2363, 2543
SlaI	CTCGAG	2 cut(s)	61, 666
SmiMI	CAYNNNNRTG	2 cut(s)	1880, 2630
SmlI	CTYRAG	4 cut(s)	61, 188, 666, 805
SmoI	CTYRAG	4 cut(s)	61, 188, 666, 805
SpeI	ACTAGT	2 cut(s)	2330, 2336
SseBI	AGGCCT	1 cut(s)	265
SsiI	CCGC	9 cut(s)	644, 707, 731, 1676, 1787, 1826, 1906, 2107, 2375
SspDI	GGCGCC	2 cut(s)	1582, 1928
SspMI	CTAG	6 cut(s)	843, 923, 2234, 2331, 2337, 2379
StuI	AGGCCT	1 cut(s)	265
StyD4I	CCNGG	5 cut(s)	107, 423, 717, 859, 1943
StyI	CCWWGG	1 cut(s)	2257
TaaI	ACNGT	8 cut(s)	792, 1155, 1607, 1624, 1630, 1660, 1735, 2129
TaiI	ACGT	5 cut(s)	1072, 1581, 1701, 1730, 1977
TatI	WGTACW	3 cut(s)	787, 2333, 2622
TauI	GCSGC	1 cut(s)	2378
Tru1I	TTAA	7 cut(s)	494, 624, 1079, 1089, 1149, 2097, 2669
Tru9I	TTAA	7 cut(s)	494, 624, 1079, 1089, 1149, 2097, 2669
TscAI	CASTG	6 cut(s)	81, 106, 609, 2329, 2356, 2710
TseFI	GTSAC	6 cut(s)	76, 435, 1142, 1624, 1660, 2407
Tsp45I	GTSAC	6 cut(s)	76, 435, 1142, 1624, 1660, 2407
TspGWI	ACGGA	1 cut(s)	1905
TspRI	CASTG	6 cut(s)	81, 106, 609, 2329, 2356, 2710
Van91I	CCANNNNNTGG	2 cut(s)	232, 1984
VneI	GTGCAC	1 cut(s)	873
VpaK11BI	GGWCC	3 cut(s)	2215, 2363, 2543
XagI	CCTNNNNNAGG	1 cut(s)	751
XbaI	TCTAGA	1 cut(s)	842
XhoI	CTCGAG	2 cut(s)	61, 666
XmnI	GAANNNNTTC	2 cut(s)	1419, 1455
XspI	CTAG	6 cut(s)	843, 923, 2234, 2331, 2337, 2379
ZraI	GACGTC	1 cut(s)	1975
ZrmI	AGTACT	1 cut(s)	2335
Zsp2I	ATGCAT	1 cut(s)	2429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.