RLG00000007589

FANCI solenoid 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0009455
Physical Location & Seq
Reverse (-)
18738483 .. 18745395
6913 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007589

Sequence Viewer

Length: 4245 bp
ATGAACGCCACCACACCCTCCTCACCTTCTCTAACAGACTCCGATATCATCCGCTTAGCCCAGTCCTGCGCCCCAATCCCCTCCTCCCTTCTCTCCACCCAATCCCACCCAACCCTGCTCTACTATCTCACTTCCCGCTCTCAATCCTCCTCACCCTCTCAGCCCGTTTCCGATTACACACTCTCTCTCCTCTCCCTCATCTCCCAATCTCCCCAAACCCACTCTCTCTCTACCCTCCTCTCCTCTCTCCTCCTCTCCTACACCCACCTCTTCACCTCCTTCAAAATCCCACACGACCCCAACTCCCTCAAGACCCTCCAATTCTTCCACACCCTATTACCCCACGTACCCACTTCTCATCTCCCCCAAATAATCGAACCCATTTTGTCATTTCTCCCCCAAATTACCGACTCCGAAAACGCCCAGATCCTCGATCTCCTCCCCCGGTGCTTGAGCTTGATTCGAAGCTCCGACGAGGTCGAACGCGGCGGCCATGTCGTCAATTCGGCGGTGCTCGATCAGATTCTGGAGCTCAATTGGTCCAAAGGACTGTTGATCAAGATGGTTTCGATCGTAAGGGACTTTCCGGTTCTTGATAAATTGAGGGCCAGAGAGTTTGTAGACAAGGTGTTCGACGGAATGTCTAGCTTAGACTTACAAGACTTGCCGTCGTTTGTGTACCAATTGCTGGTTTTGGCTTCGAAAGGGTTTGTTAAGAAGGATGTGATTGAAGGGATTGTGATGTTTTTCGGGTCGAACATGGGGAGGAAGAAGGCGAGCTCTATAGTTAGGCAAGTGGAAGGGACTGTGTTGCTGCATGTCAACTTTGCGGTGAAGCAGGACCCTTCATTGGGACAAGAGGTGATGGGGCTTGTGAAGTCTGATCTTAGAGCTTTCAATCATTTCACTGTTGCTGTTTTGTTATCAGTTTCGAGGGTGAGAAGGTTTGGTGAGGCATCAGTGGGGGCTTTGAAAATGGTGATTCTAACTGCATACCGTGATTACAAGTTTGCTAAAGACTGTAAATGGATACCAGATGACATGAAGGAAGAATATCTGCACAATGTCAAAGTGGTCGAGAAGGCCATGTTAAGAGCGGTTAATGAAAGCAACTATGGAAGGGAACACATTGTGCCTAGCATTTTGCAGTTTGCTTTTGTATTGCTAGAGTCAGTGGAAGAGGGAAACCCTAAAGAGCTCCGCAATTTAAGTGGTTTGGTAGGCATTGAGGAGCTTGCTATTCAGATGCTAAAAGCTATATTTGTGGCCCATGATATGGCTAGAAATGAGATTATTGAGCAGTGTAAATTTCGGATCCTTTCTTTGAAGCCAGAGCAGAGCATGGTTATCATAAGACTTCTTAGTAATCTAGCTCAAAGTTATCCGTACCCCATGATAGAACATGTTTCCCGGCTAAAGGAATTGTTGGATTACTTCACTTTCATGCATGGCAAGGTTGCTGCTCAACTTGTTACTGCTTTGTTGCCTCTCATCAAGTTCAGCCGTGATCTCAAGGATTACACTATTTTGGTAATGCGTAAGGCGATGTTTAGACGAGAAGATGCAATTCGTCTTGCAGCAACCAATGCTGTTATTGATTTGATTCTGGCCGAAAAGCAATCCAAGAAAGATGATTTGTTGTCTTTTCAAGAGTCATCTAGCCAAGCCAGTAGCAGTCAGCAATCTGAGATACCCTACAATGTTGGGGGAGGCCTGTTTCAAGAGCTCAGTGGTGTATTGCAGAGATGTCTTTATCAACCGGCAAATGTCAAAGAAGTCATGTATCATGGACTTGTGAAGCTTGTGTTGATGGACCCATCTAGTGGGGGGGCTGTCTTTGATTTTTTGTTGCCTCACTTCCTCCATTTTTTTAAAGAGGATGCAGATGTTCAATTAGGAATTAGCTGCTGCATAAAATCAGAGAGTGGCAAAGCTTATGTTGACGAGCCCTTAGATTGCCTTCTGTCTTGTGTTTCTTGGATGTTACTTCTACAACCAAATGGAAAAACTGAGAAAGCCTTGAATTCTTCATGGGCATGTTTGGGTTTCTCCCTTTCACAAGAAAATGAGGTAGGAAGAAATTCGTCTGCTGTCTCATTCTACAGTTCTTTCTTGAAGATTCGGAAGTCTCTACGAAATCAGAATATTGAAGGCATCTTTGGTCAAACTCAGGAGGGAGGCTTTTCATCTTTCGAAGACAACAAAAGAAAATGCTCCACTTTTGTTTTATCAGGAATTATTGAAGTACTCGTGAATGCTATTGCTACTGAGTTGGACAAAGCATCGGATAGAACGAAATTAGATCTTGAAAAGGAGCTTATTCAGTTTGTTGAGCTTCATCATTCACTCAATAAGGATACATGTTTCTCCAGCAAGAGTACTGCAGTAAGAAAAGGGAGTACTCGCACTCCTGCTCACGATATACTGAACAACATCAATTCAAGCCACTCTAAAGAAATGCAGGGACAAATTTCCTTCTTTGCAACTTCAAGCATATATCAGATATTGCAAACACTGTTGAGACTACTTGATACTGATTATTCTAATAATGTTGAAGCTTCCCAAATGCATAGTCAGTCTACCAGCAAGATATCCAAATGCAGCTCTGAATTTATTTCTTTTGTCTTGAATGTGTCCCTTAGTCATATAAAATCTTCCCTTCTTCTGCGAAATGAAGACCCTTTGAGAACTTTGATCTATGGGGAAATCAAGATCCTGGGGTCCCCCCTGTTGAAACTAATTTCTTTGTTCAAATCAGGGCCAAAGTTGGTGATGGATCAAAAGAAAAAGGAAGCAAAGGGGAAAAAAGATGTCGGACGAAGGGAGCATCTTCATCTGGCCATGATTTGCTTGAAGGAATTGATAATGATTTGTTCTAATTCAGACTTGACTGGTTTGCTTGAAGACATGGTGTCAATTTCCACTCTTCAGGATGCTGATTTGGAAACTGAATGCGAAAGAGCCTCTAGAATTGAGGATCCACATATAAGGAGCAAAGAACTGTTCATTTTGAAGACATTGAAGCCTCTATTTTCTGAGCTTCATGCAGTTTCATTATTTGGTGAAGTTGAGATTATTTGTGACCTGATATTGATGATTGGGGGAAAATTGCCATGCCAATTGAGGAACTCCCATGGAGCTTGGGCTATTAGTCTTTGCAAAAACAATGAAATAAAAAACACGAAGGTTGGAAAAAGTGTTGTGACACTTGCTATAAGTTTAAGCTCCCCTCCAAATGATCTAGCTATATCTCAAGACATGGCTACAGAGCTGTTACAGGTTATTGGATCAGAGGGAGATACTCCAGATGAGGTGTCTGAGATATACCCCCTCATAAACCGTCAAACAAGTTTGGCAATAAATTCCTGTATACTGCACATTGTTGAAGCAGTTGTAGTTGACATGGATTGGGCCATCAAAAGATTGAAGACATTCTCTTTAGTCTCCCAAAAAGGGATTCATCTGAATCAGAACAGTGAGGAATCTCCTGAGTTGGCATTTGAGGAAAATCTCTATGCTAGGGCAGAAGCAGTGGTGAAAGTACTATCATCTTTTGTTTCAATGAGCCTGAATGATACGCAAGCTGAGCATGTGCTTCGACTGGCAGCTAGGTTTTACAAGCATTTAGCTCAGATGTCAAAGCTTAGGATTGCTACAAAAGGTTGTAAACAGATTTTTCCGAGCCTCAAGTTTCAAAAGCTTGTGGAGGTAACTTGCAAGGAGCTGACAGTTCCTCTGTATATCTTTGTGGAAATTATGCAAAAGAAACAACAAGAGAATGCCCATAAAAAGGGAATTATCAACAAAATAAAGAGGGAGAACAGATGCATCCCCGACCTCATATTTCAGATAGAAGATTATGAGAAATATCTCATCCAGCTTAGCAAGGTGACCAAAGTAAATTTATTAAGGCATGCCAAGCGTAGCACTGCACGAGACTTCAGAATAAAACTAAATGAGGAGAGCAGGGGAGAAGAAAATGCTCCAAGTCCTGAAGCAAACCATGACAATATGAATGCAGTTGAAAATGAGTCTGCTGAGGATCTTGATGATAATGAAGGAAATGCGTCAGATAGGGTTTTGTCACCGGATTATCTTAATAGTCCTCCGGCTGTGGAGGATTCAGGCTCTGACAATGAAGATGGAGATGATCATCCTCCTAGTGCCAAGAGGCTGAAGAGAGTCAACAGAGTTGTGGAGGACTCTGAGGATGAAGCCGAAACCAAACAGAGGGACGAATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
FANCI_HD1 FANCI_HD2 FANCI_S1 FANCI_S2 FANCI_S4

Protein Analysis

1415

Amino Acids

158.34

Weight (kDa)

6.2

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FANCI_S1 PF14675 113 - 279 1.6e-19 FANCI solenoid 1
FANCI_HD1 PF14679 283 - 364 1e-21 FANCI helical domain 1
FANCI_S2 PF14676 377 - 531 1.5e-48 FANCI solenoid 2
FANCI_HD2 PF14680 550 - 787 1.9e-52 FANCI helical domain 2
FANCI_S4 PF14678 1085 - 1319 2.7e-72 FANCI solenoid 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 688, 1276, 1823
AccBSI CCGCTC 2 cut(s) 138, 1097
AccI GTMKAC 3 cut(s) 621, 2579, 3370
AccII CGCG 1 cut(s) 486
AciI CCGC 8 cut(s) 52, 136, 486, 489, 509, 830, 1097, 1201
AclWI GGATC 9 cut(s) 421, 1309, 1322, 2707, 2784, 2972, 2985, 3295, 4050
AcoI YGGCCR 3 cut(s) 490, 1608, 2838
AcsI RAATTY 7 cut(s) 1307, 2023, 2080, 2469, 2609, 3361, 3901
AcuI CTGAAG 4 cut(s) 2912, 3925, 4014, 4196
AdeI CACNNNGTG 1 cut(s) 1132
AfaI GTAC 7 cut(s) 348, 680, 1388, 2247, 2380, 2401, 3543
AfiI CCNNNNNNNGG 9 cut(s) 688, 850, 851, 1276, 1417, 1823, 3453, 3790, 4230
AflIII ACRYGT 2 cut(s) 1402, 2360
AhdI GACNNNNNGTC 3 cut(s) 640, 667, 2911
AjnI CCWGG 1 cut(s) 2715
AjuI GAANNNNNNNTTGG 4 cut(s) 2142, 2174, 3441, 3473
Alw21I GWGCWC 5 cut(s) 516, 534, 782, 1200, 1728
Alw26I GTCTC 5 cut(s) 2098, 2133, 2515, 3448, 3930
AlwI GGATC 9 cut(s) 421, 1309, 1322, 2707, 2784, 2972, 2985, 3295, 4050
AlwNI CAGNNNCTG 2 cut(s) 526, 4130
AoxI GGCC 9 cut(s) 490, 606, 1083, 1266, 1608, 1711, 2759, 2838, 3411
ApeKI GCWGC 7 cut(s) 814, 1460, 1577, 1905, 1908, 2601, 3605
ApoI RAATTY 7 cut(s) 1307, 2023, 2080, 2469, 2609, 3361, 3901
ArsI GACNNNNNNTTYG 4 cut(s) 614, 646, 2557, 2589
Asp700I GAANNNNTTC 2 cut(s) 2080, 3431
AspLEI GCGC 1 cut(s) 71
AspS9I GGNCC 8 cut(s) 540, 606, 841, 1267, 1813, 2721, 2759, 3411
AsuC2I CCSGG 2 cut(s) 445, 1411
AsuII TTCGAA 3 cut(s) 463, 701, 2193
AvaII GGWCC 4 cut(s) 540, 841, 1813, 2721
BalI TGGCCA 1 cut(s) 2840
BamHI GGATCC 2 cut(s) 1314, 2977
BanII GRGCYC 5 cut(s) 534, 782, 1200, 1728, 1950
BauI CACGAG 2 cut(s) 2249, 3933
BbsI GAAGAC 5 cut(s) 2202, 2682, 2910, 3020, 3434
Bbv12I GWGCWC 5 cut(s) 516, 534, 782, 1200, 1728
BbvCI CCTCAGC 1 cut(s) 4038
BbvI GCAGC 7 cut(s) 801, 1447, 1589, 1892, 1895, 2613, 3617
BccI CCATC 7 cut(s) 556, 859, 1804, 1825, 2767, 3422, 4136
BceAI ACGGC 2 cut(s) 652, 1488
BcgI CGANNNNNNTGC 2 cut(s) 3578, 3612
BciT130I CCWGG 1 cut(s) 2717
BciVI GTATCC 2 cut(s) 1023, 2350
BclI TGATCA 2 cut(s) 555, 4150
BcnI CCSGG 2 cut(s) 445, 1411
BcoDI GTCTC 5 cut(s) 2098, 2133, 2515, 3448, 3930
BfmI CTRYAG 4 cut(s) 783, 2101, 2382, 3264
BfuI GTATCC 2 cut(s) 1023, 2350
BglII AGATCT 1 cut(s) 2302
BisI GCNGC 9 cut(s) 487, 490, 815, 1461, 1578, 1906, 1909, 2602, 3606
BlpI GCTNAGC 3 cut(s) 55, 3585, 3881
BlsI GCNGC 9 cut(s) 488, 491, 816, 1462, 1579, 1907, 1910, 2603, 3607
BmcAI AGTACT 4 cut(s) 2247, 2380, 2401, 3543
Bme1390I CCNGG 3 cut(s) 445, 1411, 2717
Bme18I GGWCC 4 cut(s) 540, 841, 1813, 2721
BmeRI GACNNNNNGTC 3 cut(s) 640, 667, 2911
BmgT120I GGNCC 8 cut(s) 540, 606, 841, 1267, 1813, 2721, 2759, 3411
BmiI GGNNCC 6 cut(s) 843, 1316, 1815, 2722, 2723, 2979
BmrFI CCNGG 3 cut(s) 445, 1411, 2717
BmrI ACTGGG 1 cut(s) 55
BmuI ACTGGG 1 cut(s) 55
BpiI GAAGAC 5 cut(s) 2202, 2682, 2910, 3020, 3434
BpmI CTGGAG 3 cut(s) 548, 2353, 3288
Bpu10I CCTNAGC 2 cut(s) 3644, 4038
Bpu1102I GCTNAGC 3 cut(s) 55, 3585, 3881
Bpu14I TTCGAA 3 cut(s) 463, 701, 2193
BpuEI CTTGAG 5 cut(s) 293, 472, 1496, 3237, 3671
BpuMI CCSGG 2 cut(s) 445, 1411
BsaAI YACGTR 1 cut(s) 346
BsaBI GATNNNNATC 1 cut(s) 4152
BsaJI CCNNGG 3 cut(s) 443, 2716, 3133
BsaWI WCCGGW 2 cut(s) 586, 4087
BsaXI ACNNNNNCTCC 6 cut(s) 171, 201, 287, 317, 2392, 2422
Bsc4I CCNNNNNNNGG 9 cut(s) 688, 850, 851, 1276, 1417, 1823, 3453, 3790, 4230
Bse118I RCCGGY 1 cut(s) 1759
Bse1I ACTGG 4 cut(s) 61, 1668, 2896, 3606
Bse8I GATNNNNATC 1 cut(s) 4152
BseBI CCWGG 1 cut(s) 2717
BseDI CCNNGG 3 cut(s) 443, 2716, 3133
BseGI GGATG 9 cut(s) 48, 727, 1885, 1986, 2938, 3828, 3873, 4153, 4216
BseJI GATNNNNATC 1 cut(s) 4152
BseLI CCNNNNNNNGG 9 cut(s) 688, 850, 851, 1276, 1417, 1823, 3453, 3790, 4230
BseNI ACTGG 4 cut(s) 61, 1668, 2896, 3606
BseXI GCAGC 7 cut(s) 801, 1447, 1589, 1892, 1895, 2613, 3617
BsgI GTGCAG 3 cut(s) 1043, 3359, 3915
Bsh1236I CGCG 1 cut(s) 486
Bsh1285I CGRYCG 1 cut(s) 573
BshFI GGCC 9 cut(s) 492, 608, 1085, 1268, 1610, 1713, 2761, 2840, 3413
BsiEI CGRYCG 1 cut(s) 573
BsiHKAI GWGCWC 5 cut(s) 516, 534, 782, 1200, 1728
BsiSI CCGG 6 cut(s) 445, 587, 1411, 1760, 4088, 4109
BslFI GGGAC 6 cut(s) 593, 817, 867, 2478, 2620, 2707
BslI CCNNNNNNNGG 9 cut(s) 688, 850, 851, 1276, 1417, 1823, 3453, 3790, 4230
BsmAI GTCTC 5 cut(s) 2098, 2133, 2515, 3448, 3930
BsmFI GGGAC 6 cut(s) 593, 817, 867, 2478, 2620, 2707
BsmI GAATGC 4 cut(s) 2260, 2957, 3784, 4021
BsnI GGCC 9 cut(s) 492, 608, 1085, 1268, 1610, 1713, 2761, 2840, 3413
Bsp119I TTCGAA 3 cut(s) 463, 701, 2193
Bsp1286I GDGCHC 6 cut(s) 516, 534, 782, 1200, 1728, 1950
Bsp1720I GCTNAGC 3 cut(s) 55, 3585, 3881
Bsp19I CCATGG 1 cut(s) 3133
BspACI CCGC 8 cut(s) 52, 136, 486, 489, 509, 830, 1097, 1201
BspANI GGCC 9 cut(s) 492, 608, 1085, 1268, 1610, 1713, 2761, 2840, 3413
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 6 cut(s) 843, 1316, 1815, 2722, 2723, 2979
BspMAI CTGCAG 1 cut(s) 2386
BspPI GGATC 9 cut(s) 421, 1309, 1322, 2707, 2784, 2972, 2985, 3295, 4050
BspT104I TTCGAA 3 cut(s) 463, 701, 2193
BsrBI CCGCTC 2 cut(s) 138, 1097
BsrFI RCCGGY 1 cut(s) 1759
BsrI ACTGG 4 cut(s) 61, 1668, 2896, 3606
BssAI RCCGGY 1 cut(s) 1759
BssECI CCNNGG 3 cut(s) 443, 2716, 3133
BssNAI GTATAC 1 cut(s) 3371
BssSI CACGAG 2 cut(s) 2249, 3933
BssT1I CCWWGG 1 cut(s) 3133
Bst1107I GTATAC 1 cut(s) 3371
Bst2BI CACGAG 2 cut(s) 2249, 3933
Bst2UI CCWGG 1 cut(s) 2717
Bst6I CTCTTC 4 cut(s) 275, 1173, 2931, 4172
BstAPI GCANNNNNTGC 1 cut(s) 1586
BstBAI YACGTR 1 cut(s) 346
BstBI TTCGAA 3 cut(s) 463, 701, 2193
BstC8I GCNNGC 4 cut(s) 778, 1236, 3582, 3915
BstDSI CCRYGG 1 cut(s) 3133
BstEII GGTNACC 1 cut(s) 3889
BstF5I GGATG 9 cut(s) 48, 727, 1885, 1986, 2938, 3828, 3873, 4153, 4216
BstFNI CGCG 1 cut(s) 486
BstHHI GCGC 1 cut(s) 71
BstMAI GTCTC 5 cut(s) 2098, 2133, 2515, 3448, 3930
BstMCI CGRYCG 1 cut(s) 573
BstMWI GCNNNNNNNGC 3 cut(s) 1586, 3586, 3919
BstNI CCWGG 1 cut(s) 2717
BstNSI RCATGY 6 cut(s) 821, 1406, 2040, 2364, 3593, 3917
BstPI GGTNACC 1 cut(s) 3889
BstSCI CCNGG 3 cut(s) 443, 1409, 2715
BstSFI CTRYAG 4 cut(s) 783, 2101, 2382, 3264
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 7 cut(s) 801, 1447, 1589, 1892, 1895, 2613, 3617
BstV2I GAAGAC 5 cut(s) 2202, 2682, 2910, 3020, 3434
BstX2I RGATCY 6 cut(s) 426, 1314, 2302, 2712, 2977, 4042
BstYI RGATCY 6 cut(s) 426, 1314, 2302, 2712, 2977, 4042
BstZ17I GTATAC 1 cut(s) 3371
BsuI GTATCC 2 cut(s) 1023, 2350
BsuRI GGCC 9 cut(s) 492, 608, 1085, 1268, 1610, 1713, 2761, 2840, 3413
BtgI CCRYGG 1 cut(s) 3133
BtgZI GCGATG 1 cut(s) 1559
BtsCI GGATG 9 cut(s) 48, 727, 1885, 1986, 2938, 3828, 3873, 4153, 4216
BtsI GCAGTG 3 cut(s) 1307, 3537, 3927
BtsIMutI CAGTG 9 cut(s) 906, 966, 1179, 1307, 1735, 2513, 3481, 3537, 3927
Cac8I GCNNGC 4 cut(s) 778, 1236, 3582, 3915
CaiI CAGNNNCTG 2 cut(s) 526, 4130
CfoI GCGC 1 cut(s) 71
Cfr10I RCCGGY 1 cut(s) 1759
Cfr13I GGNCC 8 cut(s) 540, 606, 841, 1267, 1813, 2721, 2759, 3411
CseI GACGC 1 cut(s) 4056
Csp6I GTAC 7 cut(s) 347, 679, 1387, 2246, 2379, 2400, 3542
CspCI CAANNNNNGTGG 2 cut(s) 1192, 1227
CviQI GTAC 7 cut(s) 347, 679, 1387, 2246, 2379, 2400, 3542
DraI TTTAAA 1 cut(s) 1873
DraIII CACNNNGTG 1 cut(s) 1132
DriI GACNNNNNGTC 3 cut(s) 640, 667, 2911
EaeI YGGCCR 3 cut(s) 490, 1608, 2838
Eam1104I CTCTTC 4 cut(s) 275, 1173, 2931, 4172
Eam1105I GACNNNNNGTC 3 cut(s) 640, 667, 2911
EarI CTCTTC 4 cut(s) 275, 1173, 2931, 4172
Ecl136II GAGCTC 4 cut(s) 532, 780, 1198, 1726
Eco130I CCWWGG 1 cut(s) 3133
Eco147I AGGCCT 1 cut(s) 1713
Eco24I GRGCYC 5 cut(s) 534, 782, 1200, 1728, 1950
Eco32I GATATC 2 cut(s) 46, 2592
Eco47I GGWCC 4 cut(s) 540, 841, 1813, 2721
Eco53kI GAGCTC 4 cut(s) 532, 780, 1198, 1726
Eco57I CTGAAG 4 cut(s) 2912, 3925, 4014, 4196
Eco91I GGTNACC 1 cut(s) 3889
EcoICRI GAGCTC 4 cut(s) 532, 780, 1198, 1726
EcoO109I RGGNCCY 2 cut(s) 841, 2721
EcoO65I GGTNACC 1 cut(s) 3889
EcoRI GAATTC 1 cut(s) 2023
EcoRII CCWGG 1 cut(s) 2715
EcoRV GATATC 2 cut(s) 46, 2592
EcoT14I CCWWGG 1 cut(s) 3133
EcoT22I ATGCAT 3 cut(s) 1449, 2571, 3830
EcoT38I GRGCYC 5 cut(s) 534, 782, 1200, 1728, 1950
ErhI CCWWGG 1 cut(s) 3133
FaqI GGGAC 6 cut(s) 593, 817, 867, 2478, 2620, 2707
FauI CCCGC 1 cut(s) 143
FbaI TGATCA 2 cut(s) 555, 4150
FblI GTMKAC 3 cut(s) 621, 2579, 3370
Fnu4HI GCNGC 9 cut(s) 487, 490, 815, 1461, 1578, 1906, 1909, 2602, 3606
FokI GGATG 9 cut(s) 35, 734, 1892, 1993, 2945, 3815, 3860, 4140, 4223
FriOI GRGCYC 5 cut(s) 534, 782, 1200, 1728, 1950
Fsp4HI GCNGC 9 cut(s) 487, 490, 815, 1461, 1578, 1906, 1909, 2602, 3606
GlaI GCGC 1 cut(s) 70
GluI GCNGC 9 cut(s) 487, 490, 815, 1461, 1578, 1906, 1909, 2602, 3606
GsuI CTGGAG 3 cut(s) 548, 2353, 3288
HaeIII GGCC 9 cut(s) 492, 608, 1085, 1268, 1610, 1713, 2761, 2840, 3413
HapII CCGG 6 cut(s) 445, 587, 1411, 1760, 4088, 4109
HgaI GACGC 1 cut(s) 4056
HhaI GCGC 1 cut(s) 71
Hin6I GCGC 1 cut(s) 69
HinP1I GCGC 1 cut(s) 69
HincII GTYRAC 4 cut(s) 823, 1942, 3400, 4186
HindII GTYRAC 4 cut(s) 823, 1942, 3400, 4186
HindIII AAGCTT 5 cut(s) 1799, 1932, 2556, 3641, 3698
HpaII CCGG 6 cut(s) 445, 587, 1411, 1760, 4088, 4109
Hpy166II GTNNAC 9 cut(s) 622, 679, 823, 1942, 2580, 3371, 3400, 3668, 4186
Hpy8I GTNNAC 9 cut(s) 622, 679, 823, 1942, 2580, 3371, 3400, 3668, 4186
Hpy99I CGWCG 3 cut(s) 476, 638, 673
HpyCH4IV ACGT 1 cut(s) 345
HpyF10VI GCNNNNNNNGC 3 cut(s) 1586, 3586, 3919
HpySE526I ACGT 1 cut(s) 345
HspAI GCGC 1 cut(s) 69
KflI GGGWCCC 1 cut(s) 2721
Ksp22I TGATCA 2 cut(s) 555, 4150
Lsp1109I GCAGC 7 cut(s) 801, 1447, 1589, 1892, 1895, 2613, 3617
MaeII ACGT 1 cut(s) 345
MaeIII GTNAC 8 cut(s) 1471, 1983, 3080, 3202, 3273, 3709, 3889, 4083
MbiI CCGCTC 2 cut(s) 138, 1097
MfeI CAATTG 3 cut(s) 535, 683, 3119
MflI RGATCY 6 cut(s) 426, 1314, 2302, 2712, 2977, 4042
MhlI GDGCHC 6 cut(s) 516, 534, 782, 1200, 1728, 1950
MlsI TGGCCA 1 cut(s) 2840
MluNI TGGCCA 1 cut(s) 2840
MlyI GAGTC 7 cut(s) 32, 404, 1178, 1661, 4040, 4191, 4196
MmeI TCCRAC 5 cut(s) 495, 1407, 2253, 2794, 3169
Mox20I TGGCCA 1 cut(s) 2840
Mph1103I ATGCAT 3 cut(s) 1449, 2571, 3830
MroXI GAANNNNTTC 2 cut(s) 2080, 3431
MscI TGGCCA 1 cut(s) 2840
MseI TTAA 9 cut(s) 714, 1091, 1101, 1208, 1872, 3221, 3908, 4098, 4243
MslI CAYNNNNRTG 2 cut(s) 1442, 2035
Msp20I TGGCCA 1 cut(s) 2840
MspI CCGG 6 cut(s) 445, 587, 1411, 1760, 4088, 4109
MspR9I CCNGG 3 cut(s) 445, 1411, 2717
MunI CAATTG 3 cut(s) 535, 683, 3119
Mva1269I GAATGC 4 cut(s) 2260, 2957, 3784, 4021
MvaI CCWGG 1 cut(s) 2717
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 3 cut(s) 1586, 3586, 3919
NciI CCSGG 2 cut(s) 445, 1411
NcoI CCATGG 1 cut(s) 3133
NlaIV GGNNCC 6 cut(s) 843, 1316, 1815, 2722, 2723, 2979
NmuCI GTSAC 4 cut(s) 3080, 3202, 3889, 4083
NsiI ATGCAT 3 cut(s) 1449, 2571, 3830
NspI RCATGY 6 cut(s) 821, 1406, 2040, 2364, 3593, 3917
NspV TTCGAA 3 cut(s) 463, 701, 2193
PaeI GCATGC 1 cut(s) 3917
PceI AGGCCT 1 cut(s) 1713
PciI ACATGT 2 cut(s) 1402, 2360
PcsI WCGNNNNNNNCGW 1 cut(s) 2291
PctI GAATGC 4 cut(s) 2260, 2957, 3784, 4021
PdmI GAANNNNTTC 2 cut(s) 2080, 3431
PfeI GAWTC 9 cut(s) 460, 523, 982, 1603, 2119, 3457, 3466, 3482, 4121
PflFI GACNNNGTC 1 cut(s) 476
PflMI CCANNNNNTGG 3 cut(s) 688, 1276, 1823
PkrI GCNGC 9 cut(s) 488, 491, 816, 1462, 1579, 1907, 1910, 2603, 3607
Ple19I CGATCG 1 cut(s) 573
PleI GAGTC 7 cut(s) 32, 404, 1177, 1660, 4039, 4190, 4196
PpsI GAGTC 7 cut(s) 32, 404, 1177, 1660, 4039, 4190, 4196
Ppu21I YACGTR 1 cut(s) 346
PpuMI RGGWCCY 2 cut(s) 841, 2721
PscI ACATGT 2 cut(s) 1402, 2360
Psp124BI GAGCTC 4 cut(s) 534, 782, 1200, 1728
Psp5II RGGWCCY 2 cut(s) 841, 2721
Psp6I CCWGG 1 cut(s) 2715
PspEI GGTNACC 1 cut(s) 3889
PspGI CCWGG 1 cut(s) 2715
PspN4I GGNNCC 6 cut(s) 843, 1316, 1815, 2722, 2723, 2979
PspPI GGNCC 8 cut(s) 540, 606, 841, 1267, 1813, 2721, 2759, 3411
PspPPI RGGWCCY 2 cut(s) 841, 2721
PstI CTGCAG 1 cut(s) 2386
PstNI CAGNNNCTG 2 cut(s) 526, 4130
PsuI RGATCY 6 cut(s) 426, 1314, 2302, 2712, 2977, 4042
PsyI GACNNNGTC 1 cut(s) 476
PvuI CGATCG 1 cut(s) 573
RsaI GTAC 7 cut(s) 348, 680, 1388, 2247, 2380, 2401, 3543
RsaNI GTAC 7 cut(s) 347, 679, 1387, 2246, 2379, 2400, 3542
RseI CAYNNNNRTG 2 cut(s) 1442, 2035
SacI GAGCTC 4 cut(s) 534, 782, 1200, 1728
SaqAI TTAA 9 cut(s) 714, 1091, 1101, 1208, 1872, 3221, 3908, 4098, 4243
SatI GCNGC 9 cut(s) 487, 490, 815, 1461, 1578, 1906, 1909, 2602, 3606
Sau96I GGNCC 8 cut(s) 540, 606, 841, 1267, 1813, 2721, 2759, 3411
ScaI AGTACT 4 cut(s) 2247, 2380, 2401, 3543
SchI GAGTC 7 cut(s) 32, 404, 1178, 1661, 4040, 4191, 4196
ScrFI CCNGG 3 cut(s) 445, 1411, 2717
SduI GDGCHC 6 cut(s) 516, 534, 782, 1200, 1728, 1950
SfcI CTRYAG 4 cut(s) 783, 2101, 2382, 3264
SfuI TTCGAA 3 cut(s) 463, 701, 2193
SinI GGWCC 4 cut(s) 540, 841, 1813, 2721
SmiMI CAYNNNNRTG 2 cut(s) 1442, 2035
SmlI CTYRAG 5 cut(s) 308, 451, 1511, 3252, 3686
SmoI CTYRAG 5 cut(s) 308, 451, 1511, 3252, 3686
SphI GCATGC 1 cut(s) 3917
SseBI AGGCCT 1 cut(s) 1713
SsiI CCGC 8 cut(s) 52, 136, 486, 489, 509, 830, 1097, 1201
SspI AATATT 1 cut(s) 2146
SstI GAGCTC 4 cut(s) 534, 782, 1200, 1728
StuI AGGCCT 1 cut(s) 1713
StyD4I CCNGG 3 cut(s) 443, 1409, 2715
StyI CCWWGG 1 cut(s) 3133
TaiI ACGT 1 cut(s) 348
TatI WGTACW 4 cut(s) 2245, 2378, 2399, 3541
TauI GCSGC 2 cut(s) 489, 492
TfiI GAWTC 9 cut(s) 460, 523, 982, 1603, 2119, 3457, 3466, 3482, 4121
Tru1I TTAA 9 cut(s) 714, 1091, 1101, 1208, 1872, 3221, 3908, 4098, 4243
Tru9I TTAA 9 cut(s) 714, 1091, 1101, 1208, 1872, 3221, 3908, 4098, 4243
TscAI CASTG 9 cut(s) 913, 966, 1179, 1307, 1735, 2520, 3481, 3537, 3934
TseFI GTSAC 4 cut(s) 3080, 3202, 3889, 4083
TseI GCWGC 7 cut(s) 814, 1460, 1577, 1905, 1908, 2601, 3605
Tsp45I GTSAC 4 cut(s) 3080, 3202, 3889, 4083
TspGWI ACGGA 2 cut(s) 651, 1374
TspRI CASTG 9 cut(s) 913, 966, 1179, 1307, 1735, 2520, 3481, 3537, 3934
Tth111I GACNNNGTC 1 cut(s) 476
Van91I CCANNNNNTGG 3 cut(s) 688, 1276, 1823
VpaK11BI GGWCC 4 cut(s) 540, 841, 1813, 2721
XapI RAATTY 7 cut(s) 1307, 2023, 2080, 2469, 2609, 3361, 3901
XbaI TCTAGA 1 cut(s) 2966
XceI RCATGY 6 cut(s) 821, 1406, 2040, 2364, 3593, 3917
XmiI GTMKAC 3 cut(s) 621, 2579, 3370
XmnI GAANNNNTTC 2 cut(s) 2080, 3431
ZrmI AGTACT 4 cut(s) 2247, 2380, 2401, 3543
Zsp2I ATGCAT 3 cut(s) 1449, 2571, 3830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.