Rh4DG243000

FANCI solenoid 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0009455
Physical Location & Seq
Forward (+)
45331185 .. 45338424
7240 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG243000.1

Sequence Viewer

Length: 3594 bp
ATGAGCGCCACCACACCCTCCTCACCATCTCTAACAGACTCCGATATCATCCGCTTAGCCCAGTCCTGCGCCCCAATCCCCTCCTCCCTTCTTTCCACCCAATCCCACCCAACCCTCCTCTCCTACCTCACTTCCCGCTCTCAATCCTCCTCACCCTCTCAGCCCGTCTCCGATTACACACTCTCTCTCCTCTCCCTCATCTCCCAATCTCCCCAAACCCACTCTCTCTCTACCCTCCTCTCCTCTCTCCTCCTCTCCTACACCCACCTCTTCACCTCCTTTCAAATCCCACACGACCCCAACTCCCTCAAGACCCTCCAATTCTTCCACACCCTATTACCCCACGTACCCACTTCTCATCTCCCCCAAATAATCGAACCCATTTTGTCATTTTCCCCCCAAATTACCGACTCCGAAAACGCCCAGATCCTCGATCTCCTCCCACGGTGCTTGAGCTTGATTCGAAGCTCCGACGAGGTCGAACGCGGCGGCCATGTCGTCAATTCGGTGCTCGATCAGATTCTGGAGCTCAATTGGTCCAAAGGACTGTTGATCAAGATGGTTTCGATCGTAAGGGACTTTCCGGTTCTTGATAAATTGAGGGCCAGAGAGTTTGTAGACAAGGTGTTCGATGGAATGTCTAGCTTAGACTTACAAGACTTGCCGTCGCTTGTCTACCAATTGCTGGTTTTGGCGTCGAAAGGGTTTGTTAAGAAGGATGTGATTGAAGGGATTGTGATGTTTTTTGGGTCGAAAATGGGGAGGAAGAAGGCGAGCTCTATAGTCAGGCAAGTGGAAGGGACTGTTTTGCTGCATGTCAACTTTGCGGTGAAGCAGGACCCTTCATTGGGACAAGAGGTGATGGGGCTTGTGAAGTCTGATCTTAGAGCTTTCAATCATTTTACTGTTGCTGTTTTGTTATCGGTTTCGAGGGTGAGGAGGTTTGGTGAGGCATCAATGGGGGCTTTGAAAATGGCGATTCTAACTGCATACCGTGATTACAAGTTTGCTAAAGAATGTAAATGGATACCGGATGACATGAAGGAAGAATATCTGCACAATGTCAAAGTGGTCGAGAAGGCCATGTTAAGAGCGGTTAATGAGAGCAACTATGGAAGGGAACACATTGTGCCTAGCATTTTGCAGTTTGCTTTTGTATTGCTAGAGTCAGTGGAAGAGGGAAACCATAAAGAGCTCTGCAATTTAAGTGGTTTGGTAGGCATTGAGGAGCTTGCTATTCAGATGCTAAAAGCTATATTTGTGGCCCATGATATGGCTAGAAATGAGATTATTGAGCAGTGTAAATTTCGGATCCTTTCTTTGAAGCCAGAGCAGAGCATGGTTATCATTAGACTTCTCAGTAATCTAGCTCAAAGTTATCCATACCCCATGTTAGAACATGTTTCCCGGCTAAAGGAATTGTTGGATTACTTCACTTTCATGCATGGCAAGGTTGCTGCTCAACTTGTTACTGCTTTGTTGCCTCTCATCAAGTTCAGCCGTGATCTCAAGGATTACACTATTTTGGTAATGCGTAAGGCGATGTTTAGACGAGAAGATACAATTCGTCTTGCAGCAACCAATGCTGTTATTGATTTGATTCTGGCCGAAAAGCAATCCAAGAAAGATGATTTGTTGTCTTTTCAAGAGTCATCGAGCCAAGCCAGTAGCAGTCAGCAATCTGAGATACCCTACAATGTTGGGGGAGGCCTGTTTCAAGAGCTCAGTGGTCTATTGCAGAGATGTCTTTATCAACCGGCAAGTGTCAAAGAAGTCATGTATCATGGACTTGTGAAGCTTGTGTTGATGGACCCATCTAGTGGGGGGGCTGTCTTTGATTTTTTGTTGCCTCACTTCCTCCATTTTTTTAAAGAGGATGCAGATGTTCAATTAGGAATTAGCTGCTGCATAAAATCAGAGAGTGGCAAAGCTTATGTTGAAGAGCCCTTAGATTGCCTTCTGTCTTGTGTTTCTTGGATGTTACTTCTACAACCAAATGGAAAAACTGAGAAAGCCTTGAATTCTTCATGGGCATGTTTGGGTTTCTCCCTTTCACAAGAAAACGAGGTAGGAAGAAATTCGTCCGCCGACTCATTCTACAGTTCTTTCTTGAAGATTCGGAAGTCTCTACGAAATCAGAATATTGAAGGCATCTTTGGTCAAACTCAGGATGGAGGCTCTTCATCTTTTGAAGACAACAAAAGAAAATGCTCCGCTTTTGTTTTATCAGGAATTATTGAAGTACTCGTGAATGCTATTGCTACTGAGTTGGACAAAGCATCGGATAGAACGAAATTAGATCTTGAAAAGGAGCTTATTCAGTTTGTTGAGCTTCATCATTCACTCAATAAGGATACATGTTTCTCCAGCAAGAGTACTGCAGTAAGAAAAGGGAGTACTCGCACTCCTCCTCACGATATACTGAACAACAGCAATTCAAGCCACTCTAAAGAAATGCAAGGACGGATTTCCTTCTTTGCAACTTCAAGCATATATCAGATATTGCAAACACTGTTGAGACTACTTGATACTGATTATTCTAATAATGTTGAAGCTTCCCAAATGCATAGTCAGTCTACCAGCAAGACATCCAAATGCAGCTCTGAATTTATTTCTTTTGTCTTGAATGTGTCCCTTAGTCATATAAAATCTTCCCTTCTTCTGCGAAATGAAGACCCTTTGAGAACTTTAATCTATGGGGAAATCAAGATCCTGGGGTCCCCCTTGTTGAAACTATTTTCTTTGTTCAAATCAGGGCCAAAGTTGGAGATGGATCAAAAGAAAAAGGAAGCGAAGGGGAAAAAAGATGTCGGACGAAGGGAGCATCTTCATCTGGCCTTGATTTGCTTGAAGGAATTGATAATGATTTGTTCTAATTCAGACTTGACTGGTTTGCTTGAAGACATGGTGTCAATTTCCACTCTTCAGGATGCTGATTTGGAAACTGAATGCGAAAGAGCCTCTAGAATTGAGGATCCACATATAAGGAGCAAAGAACTGTTCATTTTGAAGACATTGAAGCCTCTATTTTCTGAGCTTCTTGCAGTTTCATTATTTGGTGAAGTTGAGATTATTTGTGACCTGATATTGATGATTGGGGAAAAATTGCCATGCCAATTGAGGAACTCCCATGGAGCTTGGGCTATTAGTCTTTGCAAAAACAATGAAATAAAAAACACGAAGGTTGGAAAAAGTGTTGTGACACTTGCTATAAGTTTAAGCTCCCCTCCAAATGATCTAGCTATATCTCAAGACATGGCTCGGGAGTTGTTACAGGTTATTGGATCAGAGGGAGATACTCCAGAGGAGGTGTCCGAGATATACCCCCTCATAAACCATCAAACAAGTTCGGCAATAAATTCCTGTATACTGCACATTGTTGAAGCAGTTGTAGTTGACATGGATTGGGCCATCAAAAGATTGAAGACATTCTCTTTAGTCTCCCAAAAAGGGATTCATCTGAATCAGAACAGTGAGGAATCTCCTGAGTTGGCATTTGAGGAAAATCTCTATGCTAGGGCAGAAGCAGTGGTGAAAGTACTCTCATCTTTTGTTTCAATGAGCCTGAATGGTATATGCAGTTACTGTAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
FANCI_HD1 FANCI_HD2 FANCI_S1 FANCI_S2 FANCI_S4

Protein Analysis

1197

Amino Acids

133.36

Weight (kDa)

6.23

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FANCI_S1 PF14675 113 - 278 1.8e-18 FANCI solenoid 1
FANCI_HD1 PF14679 282 - 363 2.3e-22 FANCI helical domain 1
FANCI_S2 PF14676 376 - 530 2.9e-49 FANCI solenoid 2
FANCI_HD2 PF14680 549 - 786 7.3e-55 FANCI helical domain 2
FANCI_S4 PF14678 1084 - 1191 1.8e-18 FANCI solenoid 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 685, 1273, 1820
AccBSI CCGCTC 2 cut(s) 138, 1094
AccI GTMKAC 4 cut(s) 618, 675, 2576, 3367
AccII CGCG 1 cut(s) 486
AciI CCGC 8 cut(s) 52, 136, 486, 489, 827, 1094, 2085, 2214
AclWI GGATC 8 cut(s) 421, 1306, 1319, 2704, 2781, 2969, 2982, 3292
AcoI YGGCCR 2 cut(s) 490, 1605
AcsI RAATTY 5 cut(s) 1304, 2020, 2077, 2606, 3358
AcuI CTGAAG 1 cut(s) 2909
AcyI GRCGYC 1 cut(s) 695
AdeI CACNNNGTG 1 cut(s) 1129
AfaI GTAC 5 cut(s) 348, 2244, 2377, 2398, 3540
AfiI CCNNNNNNNGG 7 cut(s) 685, 847, 848, 1273, 1414, 1820, 3450
AflIII ACRYGT 2 cut(s) 1399, 2357
AhdI GACNNNNNGTC 2 cut(s) 664, 2908
AjnI CCWGG 1 cut(s) 2712
AjuI GAANNNNNNNTTGG 4 cut(s) 2139, 2171, 3438, 3470
Alw21I GWGCWC 5 cut(s) 513, 531, 779, 1197, 1725
Alw26I GTCTC 4 cut(s) 172, 2130, 2512, 3445
AlwI GGATC 8 cut(s) 421, 1306, 1319, 2704, 2781, 2969, 2982, 3292
AlwNI CAGNNNCTG 2 cut(s) 523, 3585
Ama87I CYCGRG 1 cut(s) 3261
AoxI GGCC 9 cut(s) 490, 603, 1080, 1263, 1605, 1708, 2756, 2835, 3408
ApeKI GCWGC 6 cut(s) 811, 1457, 1574, 1902, 1905, 2598
ApoI RAATTY 5 cut(s) 1304, 2020, 2077, 2606, 3358
ArsI GACNNNNNNTTYG 4 cut(s) 611, 643, 2554, 2586
Asp700I GAANNNNTTC 2 cut(s) 2077, 3428
AspLEI GCGC 2 cut(s) 8, 71
AspS9I GGNCC 8 cut(s) 537, 603, 838, 1264, 1810, 2718, 2756, 3408
AsuC2I CCSGG 1 cut(s) 1408
AsuHPI GGTGA 9 cut(s) 15, 144, 265, 841, 871, 946, 959, 3071, 3544
AsuII TTCGAA 1 cut(s) 463
AvaI CYCGRG 1 cut(s) 3261
AvaII GGWCC 4 cut(s) 537, 838, 1810, 2718
BamHI GGATCC 2 cut(s) 1311, 2974
BanII GRGCYC 5 cut(s) 531, 779, 1197, 1725, 1947
BauI CACGAG 1 cut(s) 2246
BbsI GAAGAC 5 cut(s) 2199, 2679, 2907, 3017, 3431
Bbv12I GWGCWC 5 cut(s) 513, 531, 779, 1197, 1725
BbvI GCAGC 6 cut(s) 798, 1444, 1586, 1889, 1892, 2610
BceAI ACGGC 2 cut(s) 649, 1485
BciT130I CCWGG 1 cut(s) 2714
BciVI GTATCC 2 cut(s) 1020, 2347
BclI TGATCA 1 cut(s) 552
BcnI CCSGG 1 cut(s) 1408
BcoDI GTCTC 4 cut(s) 172, 2130, 2512, 3445
BfaI CTAG 9 cut(s) 642, 1134, 1163, 1278, 1367, 1818, 2964, 3239, 3516
BfmI CTRYAG 3 cut(s) 780, 2098, 2379
BfoI RGCGCY 1 cut(s) 9
BfuI GTATCC 2 cut(s) 1020, 2347
BglII AGATCT 1 cut(s) 2299
BisI GCNGC 8 cut(s) 487, 490, 812, 1458, 1575, 1903, 1906, 2599
BlpI GCTNAGC 1 cut(s) 55
BlsI GCNGC 8 cut(s) 488, 491, 813, 1459, 1576, 1904, 1907, 2600
BmcAI AGTACT 4 cut(s) 2244, 2377, 2398, 3540
Bme1390I CCNGG 2 cut(s) 1408, 2714
Bme18I GGWCC 4 cut(s) 537, 838, 1810, 2718
BmeRI GACNNNNNGTC 2 cut(s) 664, 2908
BmeT110I CYCGRG 1 cut(s) 3261
BmgT120I GGNCC 8 cut(s) 537, 603, 838, 1264, 1810, 2718, 2756, 3408
BmiI GGNNCC 6 cut(s) 840, 1313, 1812, 2719, 2720, 2976
BmrFI CCNGG 2 cut(s) 1408, 2714
BmrI ACTGGG 1 cut(s) 55
BmsI GCATC 7 cut(s) 962, 1233, 1867, 2160, 2288, 2833, 2920
BmuI ACTGGG 1 cut(s) 55
BpiI GAAGAC 5 cut(s) 2199, 2679, 2907, 3017, 3431
BpmI CTGGAG 3 cut(s) 545, 2350, 3285
Bpu1102I GCTNAGC 1 cut(s) 55
Bpu14I TTCGAA 1 cut(s) 463
BpuEI CTTGAG 4 cut(s) 293, 472, 1493, 3234
BpuMI CCSGG 1 cut(s) 1408
BsaAI YACGTR 1 cut(s) 346
BsaHI GRCGYC 1 cut(s) 695
BsaJI CCNNGG 3 cut(s) 443, 2713, 3130
BsaWI WCCGGW 2 cut(s) 583, 1030
BsaXI ACNNNNNCTCC 8 cut(s) 171, 201, 287, 317, 931, 961, 2389, 2419
Bsc4I CCNNNNNNNGG 7 cut(s) 685, 847, 848, 1273, 1414, 1820, 3450
Bse118I RCCGGY 1 cut(s) 1756
Bse1I ACTGG 3 cut(s) 61, 1665, 2893
BseBI CCWGG 1 cut(s) 2714
BseDI CCNNGG 3 cut(s) 443, 2713, 3130
BseGI GGATG 8 cut(s) 48, 724, 1039, 1882, 1983, 2176, 2588, 2935
BseLI CCNNNNNNNGG 7 cut(s) 685, 847, 848, 1273, 1414, 1820, 3450
BseMII CTCAG 9 cut(s) 173, 1372, 1674, 1738, 1998, 2180, 2256, 3024, 3477
BseNI ACTGG 3 cut(s) 61, 1665, 2893
BseXI GCAGC 6 cut(s) 798, 1444, 1586, 1889, 1892, 2610
BsgI GTGCAG 2 cut(s) 1040, 3356
Bsh1236I CGCG 1 cut(s) 486
Bsh1285I CGRYCG 1 cut(s) 570
BshFI GGCC 9 cut(s) 492, 605, 1082, 1265, 1607, 1710, 2758, 2837, 3410
BsiEI CGRYCG 1 cut(s) 570
BsiHKAI GWGCWC 5 cut(s) 513, 531, 779, 1197, 1725
BsiHKCI CYCGRG 1 cut(s) 3261
BsiSI CCGG 4 cut(s) 584, 1031, 1408, 1757
BslFI GGGAC 5 cut(s) 590, 814, 864, 2617, 2704
BslI CCNNNNNNNGG 7 cut(s) 685, 847, 848, 1273, 1414, 1820, 3450
BsmAI GTCTC 4 cut(s) 172, 2130, 2512, 3445
BsmBI CGTCTC 1 cut(s) 172
BsmFI GGGAC 5 cut(s) 590, 814, 864, 2617, 2704
BsmI GAATGC 2 cut(s) 2257, 2954
BsnI GGCC 9 cut(s) 492, 605, 1082, 1265, 1607, 1710, 2758, 2837, 3410
BsoBI CYCGRG 1 cut(s) 3261
Bsp119I TTCGAA 1 cut(s) 463
Bsp1286I GDGCHC 6 cut(s) 513, 531, 779, 1197, 1725, 1947
Bsp1720I GCTNAGC 1 cut(s) 55
Bsp19I CCATGG 1 cut(s) 3130
BspACI CCGC 8 cut(s) 52, 136, 486, 489, 827, 1094, 2085, 2214
BspANI GGCC 9 cut(s) 492, 605, 1082, 1265, 1607, 1710, 2758, 2837, 3410
BspCNI CTCAG 9 cut(s) 172, 1371, 1675, 1737, 1999, 2179, 2257, 3025, 3478
BspFNI CGCG 1 cut(s) 486
BspLI GGNNCC 6 cut(s) 840, 1313, 1812, 2719, 2720, 2976
BspMAI CTGCAG 1 cut(s) 2383
BspPI GGATC 8 cut(s) 421, 1306, 1319, 2704, 2781, 2969, 2982, 3292
BspQI GCTCTTC 2 cut(s) 1935, 2185
BspT104I TTCGAA 1 cut(s) 463
BsrBI CCGCTC 2 cut(s) 138, 1094
BsrFI RCCGGY 1 cut(s) 1756
BsrI ACTGG 3 cut(s) 61, 1665, 2893
BssAI RCCGGY 1 cut(s) 1756
BssECI CCNNGG 3 cut(s) 443, 2713, 3130
BssNAI GTATAC 1 cut(s) 3368
BssNI GRCGYC 1 cut(s) 695
BssSI CACGAG 1 cut(s) 2246
BssT1I CCWWGG 1 cut(s) 3130
Bst1107I GTATAC 1 cut(s) 3368
Bst2BI CACGAG 1 cut(s) 2246
Bst2UI CCWGG 1 cut(s) 2714
Bst6I CTCTTC 5 cut(s) 275, 1170, 1935, 2185, 2928
BstACI GRCGYC 1 cut(s) 695
BstAPI GCANNNNNTGC 1 cut(s) 1583
BstBAI YACGTR 1 cut(s) 346
BstBI TTCGAA 1 cut(s) 463
BstC8I GCNNGC 2 cut(s) 775, 1233
BstDSI CCRYGG 2 cut(s) 443, 3130
BstF5I GGATG 8 cut(s) 48, 724, 1039, 1882, 1983, 2176, 2588, 2935
BstFNI CGCG 1 cut(s) 486
BstH2I RGCGCY 1 cut(s) 9
BstHHI GCGC 2 cut(s) 8, 71
BstMAI GTCTC 4 cut(s) 172, 2130, 2512, 3445
BstMCI CGRYCG 1 cut(s) 570
BstMWI GCNNNNNNNGC 2 cut(s) 1583, 2439
BstNI CCWGG 1 cut(s) 2714
BstNSI RCATGY 4 cut(s) 818, 1403, 2037, 2361
BstSCI CCNGG 2 cut(s) 1406, 2712
BstSFI CTRYAG 3 cut(s) 780, 2098, 2379
BstUI CGCG 1 cut(s) 486
BstV1I GCAGC 6 cut(s) 798, 1444, 1586, 1889, 1892, 2610
BstV2I GAAGAC 5 cut(s) 2199, 2679, 2907, 3017, 3431
BstX2I RGATCY 5 cut(s) 426, 1311, 2299, 2709, 2974
BstYI RGATCY 5 cut(s) 426, 1311, 2299, 2709, 2974
BstZ17I GTATAC 1 cut(s) 3368
BsuI GTATCC 2 cut(s) 1020, 2347
BsuRI GGCC 9 cut(s) 492, 605, 1082, 1265, 1607, 1710, 2758, 2837, 3410
BtgI CCRYGG 2 cut(s) 443, 3130
BtgZI GCGATG 1 cut(s) 1556
BtsCI GGATG 8 cut(s) 48, 724, 1039, 1882, 1983, 2176, 2588, 2935
BtsI GCAGTG 2 cut(s) 1304, 3534
BtsIMutI CAGTG 6 cut(s) 1176, 1304, 1732, 2510, 3478, 3534
Cac8I GCNNGC 2 cut(s) 775, 1233
CaiI CAGNNNCTG 2 cut(s) 523, 3585
CfoI GCGC 2 cut(s) 8, 71
Cfr10I RCCGGY 1 cut(s) 1756
Cfr13I GGNCC 8 cut(s) 537, 603, 838, 1264, 1810, 2718, 2756, 3408
CseI GACGC 1 cut(s) 684
Csp6I GTAC 5 cut(s) 347, 2243, 2376, 2397, 3539
CspCI CAANNNNNGTGG 4 cut(s) 432, 467, 1189, 1224
CviQI GTAC 5 cut(s) 347, 2243, 2376, 2397, 3539
DraI TTTAAA 1 cut(s) 1870
DraIII CACNNNGTG 1 cut(s) 1129
DriI GACNNNNNGTC 2 cut(s) 664, 2908
EaeI YGGCCR 2 cut(s) 490, 1605
Eam1104I CTCTTC 5 cut(s) 275, 1170, 1935, 2185, 2928
Eam1105I GACNNNNNGTC 2 cut(s) 664, 2908
EarI CTCTTC 5 cut(s) 275, 1170, 1935, 2185, 2928
EciI GGCGGA 1 cut(s) 2074
Ecl136II GAGCTC 4 cut(s) 529, 777, 1195, 1723
Eco130I CCWWGG 1 cut(s) 3130
Eco147I AGGCCT 1 cut(s) 1710
Eco24I GRGCYC 5 cut(s) 531, 779, 1197, 1725, 1947
Eco32I GATATC 1 cut(s) 46
Eco47I GGWCC 4 cut(s) 537, 838, 1810, 2718
Eco53kI GAGCTC 4 cut(s) 529, 777, 1195, 1723
Eco57I CTGAAG 1 cut(s) 2909
Eco88I CYCGRG 1 cut(s) 3261
EcoICRI GAGCTC 4 cut(s) 529, 777, 1195, 1723
EcoO109I RGGNCCY 2 cut(s) 838, 2718
EcoRI GAATTC 1 cut(s) 2020
EcoRII CCWGG 1 cut(s) 2712
EcoRV GATATC 1 cut(s) 46
EcoT14I CCWWGG 1 cut(s) 3130
EcoT22I ATGCAT 2 cut(s) 1446, 2568
EcoT38I GRGCYC 5 cut(s) 531, 779, 1197, 1725, 1947
ErhI CCWWGG 1 cut(s) 3130
Esp3I CGTCTC 1 cut(s) 172
FaqI GGGAC 5 cut(s) 590, 814, 864, 2617, 2704
FauI CCCGC 1 cut(s) 143
FbaI TGATCA 1 cut(s) 552
FblI GTMKAC 4 cut(s) 618, 675, 2576, 3367
Fnu4HI GCNGC 8 cut(s) 487, 490, 812, 1458, 1575, 1903, 1906, 2599
FokI GGATG 8 cut(s) 35, 731, 1046, 1889, 1990, 2183, 2575, 2942
FriOI GRGCYC 5 cut(s) 531, 779, 1197, 1725, 1947
Fsp4HI GCNGC 8 cut(s) 487, 490, 812, 1458, 1575, 1903, 1906, 2599
FspBI CTAG 9 cut(s) 642, 1134, 1163, 1278, 1367, 1818, 2964, 3239, 3516
GlaI GCGC 2 cut(s) 7, 70
GluI GCNGC 8 cut(s) 487, 490, 812, 1458, 1575, 1903, 1906, 2599
GsuI CTGGAG 3 cut(s) 545, 2350, 3285
HaeII RGCGCY 1 cut(s) 9
HaeIII GGCC 9 cut(s) 492, 605, 1082, 1265, 1607, 1710, 2758, 2837, 3410
HapII CCGG 4 cut(s) 584, 1031, 1408, 1757
HgaI GACGC 1 cut(s) 684
HhaI GCGC 2 cut(s) 8, 71
Hin1I GRCGYC 1 cut(s) 695
Hin6I GCGC 2 cut(s) 6, 69
HinP1I GCGC 2 cut(s) 6, 69
HincII GTYRAC 2 cut(s) 820, 3397
HindII GTYRAC 2 cut(s) 820, 3397
HindIII AAGCTT 3 cut(s) 1796, 1929, 2553
HpaII CCGG 4 cut(s) 584, 1031, 1408, 1757
HphI GGTGA 9 cut(s) 15, 144, 265, 841, 871, 946, 959, 3071, 3544
Hpy166II GTNNAC 6 cut(s) 619, 676, 820, 2577, 3368, 3397
Hpy8I GTNNAC 6 cut(s) 619, 676, 820, 2577, 3368, 3397
Hpy99I CGWCG 3 cut(s) 476, 670, 700
HpyCH4IV ACGT 1 cut(s) 345
HpyF10VI GCNNNNNNNGC 2 cut(s) 1583, 2439
HpySE526I ACGT 1 cut(s) 345
Hsp92I GRCGYC 1 cut(s) 695
HspAI GCGC 2 cut(s) 6, 69
KflI GGGWCCC 1 cut(s) 2718
Ksp22I TGATCA 1 cut(s) 552
LguI GCTCTTC 2 cut(s) 1935, 2185
LmnI GCTCC 9 cut(s) 473, 526, 1228, 2216, 2311, 2821, 2988, 3134, 3227
Lsp1109I GCAGC 6 cut(s) 798, 1444, 1586, 1889, 1892, 2610
LweI GCATC 7 cut(s) 962, 1233, 1867, 2160, 2288, 2833, 2920
MaeI CTAG 9 cut(s) 642, 1134, 1163, 1278, 1367, 1818, 2964, 3239, 3516
MaeII ACGT 1 cut(s) 345
MaeIII GTNAC 6 cut(s) 1468, 1980, 3077, 3199, 3270, 3581
MbiI CCGCTC 2 cut(s) 138, 1094
MfeI CAATTG 3 cut(s) 532, 680, 3116
MflI RGATCY 5 cut(s) 426, 1311, 2299, 2709, 2974
MhlI GDGCHC 6 cut(s) 513, 531, 779, 1197, 1725, 1947
MlyI GAGTC 5 cut(s) 32, 404, 1175, 1658, 2084
MmeI TCCRAC 6 cut(s) 495, 1404, 2250, 2745, 2791, 3166
Mph1103I ATGCAT 2 cut(s) 1446, 2568
MroXI GAANNNNTTC 2 cut(s) 2077, 3428
MseI TTAA 7 cut(s) 711, 1088, 1098, 1205, 1869, 2690, 3218
MslI CAYNNNNRTG 3 cut(s) 1439, 2032, 2593
MspI CCGG 4 cut(s) 584, 1031, 1408, 1757
MspR9I CCNGG 2 cut(s) 1408, 2714
MunI CAATTG 3 cut(s) 532, 680, 3116
Mva1269I GAATGC 2 cut(s) 2257, 2954
MvaI CCWGG 1 cut(s) 2714
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 2 cut(s) 1583, 2439
NciI CCSGG 1 cut(s) 1408
NcoI CCATGG 1 cut(s) 3130
NlaIV GGNNCC 6 cut(s) 840, 1313, 1812, 2719, 2720, 2976
NmuCI GTSAC 2 cut(s) 3077, 3199
NsiI ATGCAT 2 cut(s) 1446, 2568
NspI RCATGY 4 cut(s) 818, 1403, 2037, 2361
NspV TTCGAA 1 cut(s) 463
PceI AGGCCT 1 cut(s) 1710
PciI ACATGT 2 cut(s) 1399, 2357
PciSI GCTCTTC 2 cut(s) 1935, 2185
PcsI WCGNNNNNNNCGW 1 cut(s) 2288
PctI GAATGC 2 cut(s) 2257, 2954
PdmI GAANNNNTTC 2 cut(s) 2077, 3428
PfeI GAWTC 8 cut(s) 460, 520, 979, 1600, 2116, 3454, 3463, 3479
PflFI GACNNNGTC 1 cut(s) 476
PflMI CCANNNNNTGG 3 cut(s) 685, 1273, 1820
PkrI GCNGC 8 cut(s) 488, 491, 813, 1459, 1576, 1904, 1907, 2600
Ple19I CGATCG 1 cut(s) 570
PleI GAGTC 5 cut(s) 32, 404, 1174, 1657, 2084
PpsI GAGTC 5 cut(s) 32, 404, 1174, 1657, 2084
Ppu21I YACGTR 1 cut(s) 346
PpuMI RGGWCCY 2 cut(s) 838, 2718
PscI ACATGT 2 cut(s) 1399, 2357
Psp124BI GAGCTC 4 cut(s) 531, 779, 1197, 1725
Psp5II RGGWCCY 2 cut(s) 838, 2718
Psp6I CCWGG 1 cut(s) 2712
PspGI CCWGG 1 cut(s) 2712
PspN4I GGNNCC 6 cut(s) 840, 1313, 1812, 2719, 2720, 2976
PspPI GGNCC 8 cut(s) 537, 603, 838, 1264, 1810, 2718, 2756, 3408
PspPPI RGGWCCY 2 cut(s) 838, 2718
PstI CTGCAG 1 cut(s) 2383
PstNI CAGNNNCTG 2 cut(s) 523, 3585
PsuI RGATCY 5 cut(s) 426, 1311, 2299, 2709, 2974
PsyI GACNNNGTC 1 cut(s) 476
PvuI CGATCG 1 cut(s) 570
RsaI GTAC 5 cut(s) 348, 2244, 2377, 2398, 3540
RsaNI GTAC 5 cut(s) 347, 2243, 2376, 2397, 3539
RseI CAYNNNNRTG 3 cut(s) 1439, 2032, 2593
SacI GAGCTC 4 cut(s) 531, 779, 1197, 1725
SapI GCTCTTC 2 cut(s) 1935, 2185
SaqAI TTAA 7 cut(s) 711, 1088, 1098, 1205, 1869, 2690, 3218
SatI GCNGC 8 cut(s) 487, 490, 812, 1458, 1575, 1903, 1906, 2599
Sau96I GGNCC 8 cut(s) 537, 603, 838, 1264, 1810, 2718, 2756, 3408
ScaI AGTACT 4 cut(s) 2244, 2377, 2398, 3540
SchI GAGTC 5 cut(s) 32, 404, 1175, 1658, 2084
ScrFI CCNGG 2 cut(s) 1408, 2714
SduI GDGCHC 6 cut(s) 513, 531, 779, 1197, 1725, 1947
SfaNI GCATC 7 cut(s) 962, 1233, 1867, 2160, 2288, 2833, 2920
SfcI CTRYAG 3 cut(s) 780, 2098, 2379
SfuI TTCGAA 1 cut(s) 463
SinI GGWCC 4 cut(s) 537, 838, 1810, 2718
SmiMI CAYNNNNRTG 3 cut(s) 1439, 2032, 2593
SmlI CTYRAG 4 cut(s) 308, 451, 1508, 3249
SmoI CTYRAG 4 cut(s) 308, 451, 1508, 3249
SseBI AGGCCT 1 cut(s) 1710
SsiI CCGC 8 cut(s) 52, 136, 486, 489, 827, 1094, 2085, 2214
SspI AATATT 1 cut(s) 2143
SspMI CTAG 9 cut(s) 642, 1134, 1163, 1278, 1367, 1818, 2964, 3239, 3516
SstI GAGCTC 4 cut(s) 531, 779, 1197, 1725
StuI AGGCCT 1 cut(s) 1710
StyD4I CCNGG 2 cut(s) 1406, 2712
StyI CCWWGG 1 cut(s) 3130
TaiI ACGT 1 cut(s) 348
TatI WGTACW 4 cut(s) 2242, 2375, 2396, 3538
TauI GCSGC 2 cut(s) 489, 492
TfiI GAWTC 8 cut(s) 460, 520, 979, 1600, 2116, 3454, 3463, 3479
Tru1I TTAA 7 cut(s) 711, 1088, 1098, 1205, 1869, 2690, 3218
Tru9I TTAA 7 cut(s) 711, 1088, 1098, 1205, 1869, 2690, 3218
TscAI CASTG 6 cut(s) 1176, 1304, 1732, 2517, 3478, 3534
TseFI GTSAC 2 cut(s) 3077, 3199
TseI GCWGC 6 cut(s) 811, 1457, 1574, 1902, 1905, 2598
Tsp45I GTSAC 2 cut(s) 3077, 3199
TspGWI ACGGA 1 cut(s) 2479
TspRI CASTG 6 cut(s) 1176, 1304, 1732, 2517, 3478, 3534
Tth111I GACNNNGTC 1 cut(s) 476
Van91I CCANNNNNTGG 3 cut(s) 685, 1273, 1820
VpaK11BI GGWCC 4 cut(s) 537, 838, 1810, 2718
XapI RAATTY 5 cut(s) 1304, 2020, 2077, 2606, 3358
XbaI TCTAGA 1 cut(s) 2963
XceI RCATGY 4 cut(s) 818, 1403, 2037, 2361
XmiI GTMKAC 4 cut(s) 618, 675, 2576, 3367
XmnI GAANNNNTTC 2 cut(s) 2077, 3428
XspI CTAG 9 cut(s) 642, 1134, 1163, 1278, 1367, 1818, 2964, 3239, 3516
ZrmI AGTACT 4 cut(s) 2244, 2377, 2398, 3540
Zsp2I ATGCAT 2 cut(s) 1446, 2568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.