Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0008859

Physical Location & Seq

Genomic Coordinates Reverse (-)

21047532 .. 21051794

Gene Structure 4263 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007787

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2721 bp

ATGGTTACTTGGTCTGGTTATTACAAAACCACAAACAAAAGCTCAAATCGGAAAATGGCGTCAATGGTTGCCAAGGGGAGTAGTTGTACCACTCAAGTGTCTCCCTCTATAACTGTTCAAGAAAAGGGTAGTAGAAATAAGAGGAAGTTCCGGGCTGATCCACCTTTAGGGGACCAGAATAAGATTTTGCCTTTACCTCAAACTGAATGTGCAAGTTACGAATTTTCAGCAGAAAAATTTGAAATCAGTCACCAGAATCATGGACAAACCAGTGTCTGTGACCTGTGTTTTGTTAATCAAGACCATTCTGATGGGTTGAAACTTGACCTTGGATTGTCTAGTGCTGTTGTTTCATCTGAGGTTGGCCCAAGCCGGCCTAGAAGGGAATCAGAGGCAGAAGAGTTTCAAGATGCTGATTGGAGTGATCTCACAGAAACCCAGCTTGAAGAACTTGTTATGAGCAATTTGGACACAATTTTCAAGAGTGCAATAAAAAAGATTGTTGCTTGTGGTTACACCGAAGACGTTGCTACAAAGGCTGTTTTGCGGTCTGGTCTTTGTTATGGGTCCAAAGACACTGTGTCCAATATAGTGGATAATACTTTAGTTTTTCTTAGGAGTGGCCAAGAAATTGATCCTTCAAGGGAGCACTGTTTTGAAGATTTACAGCAGCTAGAGAAGTACATATTGGCGGAACTGGTGTGTGTTCTTCGCGAGATTAGGCCTTTCTTCAGCACTGGCGATGCAATGTGGTGCTTATTGATCTGTGACATGAATGTCTCTCATGCTTGTGCAATGGATGGTGACCCCATAAGCAGTTTCCTCAGTGATGGCGTGTCAAATGGAAGTTCACCCATTTCAAATCAACCTCAGCCCAAAACAGAAGCCAAGAGTTTAGAATTGGGTCTTCTGAATGCTGGTAAGCCGATCTCATCAATGCCCAGTTCTCCTAGTTCACAGTCTGAGACATCTAAACCAAGAAATTCGGTTAACAATGGATTACTCTTAGAAAAAGAGGGCACAACCGGAACATCTCCATGTCCTGCTGTAGAGGAAAAGCTTGTGGGCACTAGAAAGGTCCATTCTATTAGTACCAAAAGAGAATACATGCTTCGACAAAAGTCACTTCATTTGGAGAAAAATTACCGTACATATGGATGTAAAGGGTCTTCAAGAGCAGGGAAGCTGAGTGGTTTGGGCGGTTTAATTTTGGATAAGAAGTTAAAATCTGTGTCAGACTCTACTGCTTTTAATTTAAAGAATGCATCTTTGAAAATAAGCAAGGCGATGGGAGTTGATTTGCCTAAAGACAATGGGAACCACATTCTTTCTTCCAATGCTGGACCTTCTTCCCCCGGAGTTTTTAACGTGGATGCTGAGAATGCTGCTTCAGTTTTGCCTATGAACAGTGTCTCATCCATGTTACCTTCTGCGAATAATTCAACAACATTACCAGCCCCCATTACTGCAAAAACATTGCCAGCAGCCACTACTCCACCTGCATTATCAGCTGCTGATACTGAGCTTTCCCTTTCACTGCCTATAAAAAGCAACACTACCCCAGTGCCTGTTAGCTTTAATTCTGATAACTCGAATTCTATTTTTGCTGGGATACCTTTTGATAAGTCCTTGGGGCAGTGGGTACCCAGGGACAAAAAAGATGAGATGATTTTGAAGTTGGGCCCTAGGGTGCGGGACCTGCAAAATCAGCTGCAAGAGTGGACAGAGTGGGCTAACCAGAAGGTTATGCAGGCTGCCCGTAGGCTAGGTAAGGACAAGGCTGAACTTAAGTCATTAAGGCAAGAGAAAGAAGAAGTTGAACGGCTGAAGAAAGAGAAACTAACGTTGGAGGAGAACACCATGAAGAAACTCGCTGAGATGGACAATGCTTTGTGCAAGGCTAGCGGTCAGGTGGAAAAAGCAAATTCTGCCGTCCGGAGGCTTGAGGTGGAGAATGCTGCACTAAGGCAGGAGATGGAGGCTGCCAAGTTACGTGCGGCAGAGTCAGCTGCAAGCTGTCAAGAGGTATCAAAGAGGGAGAAGAAGACACTTATGAAATTTCAGTCGTGGGAAAAGCAGAAAGCCTTGTTCAGCGAAGAACTGGTGACAGAAAAACGCAAGTTAAAACAGCTGCTTCAGGAAATAGAGCAAGCCAGAGATCTCAAGGAACAATTAGAGGCTAGATGGCAACAAGAGGAGAAATCAAAGGAAGAACTACTTGAGCAGGCAAGTTCTATAAGAAAAGAAAGGGAGCAACTTGAGGATTCAGCAAAATCCAAGGAGGATCAGATCAAACTGAAAGCAGAAAGCAATCTGCAGAAATACAAAGATGATATTCAGAATCTTGATAAAGAAATCTCCCAGTTGAGGCTCAAGAGTGATTCTTCGAAGATTGCAGCCCTTAGGAGGGGTGTAGATGGAAGTTATGCCAGCAAGGTATCAGACGTTGAAAATAGTCTGGATCAGAAGGGCTCCCAGATGCCATATATCTCAGACGTAGTGAAGGATTTGCACGACTACTCTGAGACAGGAGGGGTGAAACGCGAAAGGGAGTGTGTGATGTGCCTCTCTGAGGAAATGTCTGTGGTTTTCCTCCCATGTGCCCATCAAGTGGTCTGCAGAACTTGCAATGAGCTCCATGAAAAACAGGGTATGAAGGACTGTCCGTCATGCAGGAGCCCCATACAATGGCGTATTTCTGTACGATATGCTCGATCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

907

Amino Acids

100.39

Weight (kDa)

7.68

Isoelectric Point (pI)

51.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIR2-like_helical	PF20235	155 - 267	5.4e-31	PIR2-like, helical domain
zf-C3HC4_3	PF13920	849 - 896	5.5e-12	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008859)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g16660 FvH4_4g16660 FvH4_4g16660 FvH4_4g16660
malus_domestica	MD13G1177600.v1.1 MD16G1179600.v1.1
prunus_persica	Prupe.1G146600_v2.0.a1 Prupe.1G146600_v2.0.a1 Prupe.1G146600_v2.0.a1 Prupe.1G146600_v2.0.a1
pyrus_communis	pycom13g15320
rosa_chinensis	RchiOBHm_Chr4g0420121
rosa_laevigata	RLG00000007787
rosa_multiflora	Rmu_sc0015433.1_g000001 Rmu_sc0023895.1_g000001
rosa_roxburghii	Rroxscaffold_5G00362830
rosa_rugosa	Rorug04G0162300 Rorug04G0162400
rosa_samantha	Rh4AG223200 Rh4BG225600 Rh4CG236400 Rh4DG222000
rosa_wichuraiana	Rw4G019210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1507
AasI	GACNNNNNNGTC	1 cut(s)	776
Acc36I	ACCTGC	2 cut(s)	1507, 1707
Acc65I	GGTACC	1 cut(s)	1642
AccB1I	GGYRCC	1 cut(s)	1642
AccB7I	CCANNNNNTGG	2 cut(s)	2611, 2688
AccII	CGCG	2 cut(s)	714, 2544
AccIII	TCCGGA	1 cut(s)	1935
AciI	CCGC	6 cut(s)	547, 692, 1200, 1693, 1905, 1997
AclI	AACGTT	1 cut(s)	1844
AclWI	GGATC	4 cut(s)	152, 629, 2292, 2469
AcoI	YGGCCR	1 cut(s)	622
AcsI	RAATTY	6 cut(s)	221, 236, 982, 1594, 1924, 2057
AcuI	CTGAAG	4 cut(s)	715, 1374, 1847, 2120
AcyI	GRCGYC	1 cut(s)	59
AfaI	GTAC	6 cut(s)	88, 683, 1093, 1150, 1644, 2703
AfiI	CCNNNNNNNGG	8 cut(s)	167, 1938, 2367, 2406, 2407, 2572, 2611, 2688
AflII	CTTAAG	1 cut(s)	1787
AhdI	GACNNNNNGTC	2 cut(s)	580, 2665
AjnI	CCWGG	1 cut(s)	1646
AjuI	GAANNNNNNNTTGG	4 cut(s)	671, 703, 1829, 1861
AleI	CACNNNNGTG	1 cut(s)	95
Alw21I	GWGCWC	2 cut(s)	651, 2637
Alw26I	GTCTC	5 cut(s)	105, 784, 959, 1417, 2519
AlwI	GGATC	4 cut(s)	152, 629, 2292, 2469
AlwNI	CAGNNNCTG	3 cut(s)	276, 1514, 1568
Aor13HI	TCCGGA	1 cut(s)	1935
AoxI	GGCC	5 cut(s)	364, 374, 622, 722, 1681
ApaI	GGGCCC	1 cut(s)	1685
ApoI	RAATTY	6 cut(s)	221, 236, 982, 1594, 1924, 2057
ArsI	GACNNNNNNTTYG	2 cut(s)	272, 304
Asp700I	GAANNNNTTC	1 cut(s)	402
Asp718I	GGTACC	1 cut(s)	1642
AspA2I	CCTAGG	1 cut(s)	1685
AspS9I	GGNCC	8 cut(s)	172, 365, 567, 1078, 1343, 1681, 1682, 1696
AsuC2I	CCSGG	2 cut(s)	152, 1356
AsuHPI	GGTGA	5 cut(s)	242, 815, 843, 2116, 2548
AsuII	TTCGAA	1 cut(s)	2387
AsuNHI	GCTAGC	1 cut(s)	1901
AvaII	GGWCC	5 cut(s)	172, 567, 1078, 1343, 1696
AvrII	CCTAGG	1 cut(s)	1685
AxyI	CCTNAGG	1 cut(s)	2402
BaeGI	GKGCMC	4 cut(s)	1022, 1070, 1685, 2605
BalI	TGGCCA	1 cut(s)	624
BanI	GGYRCC	1 cut(s)	1642
BanII	GRGCYC	4 cut(s)	1685, 2474, 2637, 2681
BarI	GAAGNNNNNNTAC	2 cut(s)	1153, 1185
BbsI	GAAGAC	4 cut(s)	528, 899, 1161, 2051
Bbv12I	GWGCWC	2 cut(s)	651, 2637
BbvCI	CCTCAGC	1 cut(s)	870
BccI	CCATC	9 cut(s)	305, 794, 824, 1282, 1873, 1969, 2178, 2411, 2613
BceAI	ACGGC	2 cut(s)	1838, 1916
BcgI	CGANNNNNNTGC	2 cut(s)	509, 543
BciT130I	CCWGG	1 cut(s)	1648
BciVI	GTATCC	1 cut(s)	1605
BcnI	CCSGG	2 cut(s)	152, 1356
BcoDI	GTCTC	5 cut(s)	105, 784, 959, 1417, 2519
BfaI	CTAG	9 cut(s)	339, 378, 674, 951, 1071, 1686, 1766, 1902, 2181
BfmI	CTRYAG	3 cut(s)	1047, 2315, 2617
BfrI	CTTAAG	1 cut(s)	1787
BfuAI	ACCTGC	2 cut(s)	1507, 1707
BfuI	GTATCC	1 cut(s)	1605
BglII	AGATCT	1 cut(s)	2158
BlnI	CCTAGG	1 cut(s)	1685
Bme1390I	CCNGG	3 cut(s)	152, 1356, 1648
Bme18I	GGWCC	5 cut(s)	172, 567, 1078, 1343, 1696
BmeRI	GACNNNNNGTC	2 cut(s)	580, 2665
BmgT120I	GGNCC	8 cut(s)	172, 365, 567, 1078, 1343, 1681, 1682, 1696
BmiI	GGNNCC	8 cut(s)	173, 568, 1319, 1644, 1683, 1697, 2473, 2678
BmrFI	CCNGG	3 cut(s)	152, 1356, 1648
BmrI	ACTGGG	3 cut(s)	936, 1556, 2356
BmsI	GCATC	5 cut(s)	400, 733, 1274, 1363, 2469
BmtI	GCTAGC	1 cut(s)	1905
BmuI	ACTGGG	3 cut(s)	936, 1556, 2356
BoxI	GACNNNNGTC	1 cut(s)	1120
BpiI	GAAGAC	4 cut(s)	528, 899, 1161, 2051
Bpu10I	CCTNAGC	1 cut(s)	870
Bpu14I	TTCGAA	1 cut(s)	2387
BpuEI	CTTGAG	6 cut(s)	78, 1964, 2147, 2240, 2279, 2357
BpuMI	CCSGG	2 cut(s)	152, 1356
BsaAI	YACGTR	1 cut(s)	1994
BsaHI	GRCGYC	1 cut(s)	59
BsaJI	CCNNGG	8 cut(s)	72, 328, 1354, 1629, 1646, 1647, 1685, 2277
BsaWI	WCCGGW	2 cut(s)	1025, 1935
BsaXI	ACNNNNNCTCC	2 cut(s)	70, 100
Bsc4I	CCNNNNNNNGG	8 cut(s)	167, 1938, 2367, 2406, 2407, 2572, 2611, 2688
Bse118I	RCCGGY	1 cut(s)	372
Bse1I	ACTGG	7 cut(s)	270, 702, 742, 942, 1562, 2106, 2362
Bse21I	CCTNAGG	1 cut(s)	2402
Bse3DI	GCAATG	4 cut(s)	753, 801, 1475, 2635
BseAI	TCCGGA	1 cut(s)	1935
BseBI	CCWGG	1 cut(s)	1648
BseDI	CCNNGG	8 cut(s)	72, 328, 1354, 1629, 1646, 1647, 1685, 2277
BseGI	GGATG	4 cut(s)	805, 1163, 1378, 1415
BseLI	CCNNNNNNNGG	8 cut(s)	167, 1938, 2367, 2406, 2407, 2572, 2611, 2688
BseMI	GCAATG	4 cut(s)	753, 801, 1475, 2635
BseNI	ACTGG	7 cut(s)	270, 702, 742, 942, 1562, 2106, 2362
BseRI	GAGGAG	2 cut(s)	1865, 2210
BseSI	GKGCMC	4 cut(s)	1022, 1070, 1685, 2605
BseYI	CCCAGC	2 cut(s)	438, 1607
BsgI	GTGCAG	1 cut(s)	1944
Bsh1236I	CGCG	2 cut(s)	714, 2544
BshFI	GGCC	5 cut(s)	366, 376, 624, 724, 1683
BshNI	GGYRCC	1 cut(s)	1642
BsiHKAI	GWGCWC	2 cut(s)	651, 2637
BsiSI	CCGG	5 cut(s)	151, 373, 1026, 1356, 1936
BslFI	GGGAC	3 cut(s)	185, 1664, 1709
BslI	CCNNNNNNNGG	8 cut(s)	167, 1938, 2367, 2406, 2407, 2572, 2611, 2688
BsmAI	GTCTC	5 cut(s)	105, 784, 959, 1417, 2519
BsmFI	GGGAC	3 cut(s)	185, 1664, 1709
BsmI	GAATGC	4 cut(s)	919, 1267, 1387, 1960
BsnI	GGCC	5 cut(s)	366, 376, 624, 724, 1683
Bsp119I	TTCGAA	1 cut(s)	2387
Bsp120I	GGGCCC	1 cut(s)	1681
Bsp1286I	GDGCHC	8 cut(s)	651, 1022, 1070, 1685, 2474, 2605, 2637, 2681
Bsp13I	TCCGGA	1 cut(s)	1935
Bsp68I	TCGCGA	1 cut(s)	714
BspACI	CCGC	6 cut(s)	547, 692, 1200, 1693, 1905, 1997
BspANI	GGCC	5 cut(s)	366, 376, 624, 724, 1683
BspEI	TCCGGA	1 cut(s)	1935
BspFNI	CGCG	2 cut(s)	714, 2544
BspLI	GGNNCC	8 cut(s)	173, 568, 1319, 1644, 1683, 1697, 2473, 2678
BspMAI	CTGCAG	2 cut(s)	2319, 2621
BspMI	ACCTGC	2 cut(s)	1507, 1707
BspOI	GCTAGC	1 cut(s)	1905
BspPI	GGATC	4 cut(s)	152, 629, 2292, 2469
BspT104I	TTCGAA	1 cut(s)	2387
BspT107I	GGYRCC	1 cut(s)	1642
BspTI	CTTAAG	1 cut(s)	1787
BsrDI	GCAATG	4 cut(s)	753, 801, 1475, 2635
BsrFI	RCCGGY	1 cut(s)	372
BsrI	ACTGG	7 cut(s)	270, 702, 742, 942, 1562, 2106, 2362
BssAI	RCCGGY	1 cut(s)	372
BssECI	CCNNGG	8 cut(s)	72, 328, 1354, 1629, 1646, 1647, 1685, 2277
BssNI	GRCGYC	1 cut(s)	59
BssT1I	CCWWGG	5 cut(s)	72, 328, 1629, 1685, 2277
Bst2UI	CCWGG	1 cut(s)	1648
Bst4CI	ACNGT	7 cut(s)	115, 580, 653, 960, 1148, 1409, 2663
Bst6I	CTCTTC	1 cut(s)	393
BstACI	GRCGYC	1 cut(s)	59
BstAFI	CTTAAG	1 cut(s)	1787
BstAPI	GCANNNNNTGC	2 cut(s)	1928, 2625
BstBAI	YACGTR	1 cut(s)	1994
BstBI	TTCGAA	1 cut(s)	2387
BstC8I	GCNNGC	8 cut(s)	374, 1482, 1752, 1903, 2014, 2151, 2226, 2431
BstEII	GGTNACC	1 cut(s)	803
BstENI	CCTNNNNNAGG	1 cut(s)	2570
BstF5I	GGATG	4 cut(s)	805, 1163, 1378, 1415
BstFNI	CGCG	2 cut(s)	714, 2544
BstMAI	GTCTC	5 cut(s)	105, 784, 959, 1417, 2519
BstMWI	GCNNNNNNNGC	9 cut(s)	536, 1382, 1508, 1699, 1708, 1902, 1928, 2006, 2625
BstNI	CCWGG	1 cut(s)	1648
BstNSI	RCATGY	1 cut(s)	1111
BstPAI	GACNNNNGTC	1 cut(s)	1120
BstPI	GGTNACC	1 cut(s)	803
BstSCI	CCNGG	3 cut(s)	150, 1354, 1646
BstSFI	CTRYAG	3 cut(s)	1047, 2315, 2617
BstSLI	GKGCMC	4 cut(s)	1022, 1070, 1685, 2605
BstUI	CGCG	2 cut(s)	714, 2544
BstV2I	GAAGAC	4 cut(s)	528, 899, 1161, 2051
BstX2I	RGATCY	1 cut(s)	2158
BstXI	CCANNNNNNTGG	3 cut(s)	260, 311, 592
BstYI	RGATCY	1 cut(s)	2158
Bsu36I	CCTNAGG	1 cut(s)	2402
BsuI	GTATCC	1 cut(s)	1605
BsuRI	GGCC	5 cut(s)	366, 376, 624, 724, 1683
BtgZI	GCGATG	2 cut(s)	756, 1301
BtsCI	GGATG	4 cut(s)	805, 1163, 1378, 1415
BtsI	GCAGTG	2 cut(s)	1535, 1643
BtsIMutI	CAGTG	9 cut(s)	277, 576, 649, 735, 832, 1414, 1535, 1569, 1643
BtuMI	TCGCGA	1 cut(s)	714
BveI	ACCTGC	2 cut(s)	1507, 1707
Cac8I	GCNNGC	8 cut(s)	374, 1482, 1752, 1903, 2014, 2151, 2226, 2431
CaiI	CAGNNNCTG	3 cut(s)	276, 1514, 1568
Cfr10I	RCCGGY	1 cut(s)	372
Cfr13I	GGNCC	8 cut(s)	172, 365, 567, 1078, 1343, 1681, 1682, 1696
CseI	GACGC	1 cut(s)	48
Csp6I	GTAC	6 cut(s)	87, 682, 1092, 1149, 1643, 2702
CviQI	GTAC	6 cut(s)	87, 682, 1092, 1149, 1643, 2702
DraI	TTTAAA	1 cut(s)	1257
DrdI	GACNNNNNNGTC	1 cut(s)	776
DriI	GACNNNNNGTC	2 cut(s)	580, 2665
DseDI	GACNNNNNNGTC	1 cut(s)	776
EaeI	YGGCCR	1 cut(s)	622
Eam1104I	CTCTTC	1 cut(s)	393
Eam1105I	GACNNNNNGTC	2 cut(s)	580, 2665
EarI	CTCTTC	1 cut(s)	393
EciI	GGCGGA	1 cut(s)	707
Ecl136II	GAGCTC	1 cut(s)	2635
Eco130I	CCWWGG	5 cut(s)	72, 328, 1629, 1685, 2277
Eco147I	AGGCCT	1 cut(s)	724
Eco24I	GRGCYC	4 cut(s)	1685, 2474, 2637, 2681
Eco47I	GGWCC	5 cut(s)	172, 567, 1078, 1343, 1696
Eco53kI	GAGCTC	1 cut(s)	2635
Eco57I	CTGAAG	4 cut(s)	715, 1374, 1847, 2120
Eco81I	CCTNAGG	1 cut(s)	2402
Eco91I	GGTNACC	1 cut(s)	803
EcoICRI	GAGCTC	1 cut(s)	2635
EcoNI	CCTNNNNNAGG	1 cut(s)	2570
EcoO109I	RGGNCCY	2 cut(s)	1682, 1696
EcoO65I	GGTNACC	1 cut(s)	803
EcoRI	GAATTC	1 cut(s)	1594
EcoRII	CCWGG	1 cut(s)	1646
EcoT14I	CCWWGG	5 cut(s)	72, 328, 1629, 1685, 2277
EcoT22I	ATGCAT	1 cut(s)	1267
EcoT38I	GRGCYC	4 cut(s)	1685, 2474, 2637, 2681
ErhI	CCWWGG	5 cut(s)	72, 328, 1629, 1685, 2277
FalI	AAGNNNNNCTT	2 cut(s)	2202, 2234
FaqI	GGGAC	3 cut(s)	185, 1664, 1709
FauI	CCCGC	1 cut(s)	1686
FauNDI	CATATG	1 cut(s)	1153
FokI	GGATG	4 cut(s)	812, 1170, 1385, 1402
FriOI	GRGCYC	4 cut(s)	1685, 2474, 2637, 2681
FspBI	CTAG	9 cut(s)	339, 378, 674, 951, 1071, 1686, 1766, 1902, 2181
GsaI	CCCAGC	2 cut(s)	442, 1611
HaeIII	GGCC	5 cut(s)	366, 376, 624, 724, 1683
HapII	CCGG	5 cut(s)	151, 373, 1026, 1356, 1936
HgaI	GACGC	1 cut(s)	48
Hin1I	GRCGYC	1 cut(s)	59
HincII	GTYRAC	1 cut(s)	991
HindII	GTYRAC	1 cut(s)	991
HindIII	AAGCTT	1 cut(s)	1058
HinfI	GANTC	7 cut(s)	256, 386, 1238, 2003, 2264, 2341, 2381
HpaI	GTTAAC	1 cut(s)	991
HpaII	CCGG	5 cut(s)	151, 373, 1026, 1356, 1936
HphI	GGTGA	5 cut(s)	242, 815, 843, 2116, 2548
Hpy166II	GTNNAC	4 cut(s)	851, 956, 991, 1722
Hpy8I	GTNNAC	4 cut(s)	851, 956, 991, 1722
HpyAV	CCTTC	8 cut(s)	375, 648, 1356, 1437, 1735, 2461, 2497, 2650
HpyCH4III	ACNGT	7 cut(s)	115, 580, 653, 960, 1148, 1409, 2663
HpyCH4IV	ACGT	6 cut(s)	525, 1368, 1844, 1993, 2445, 2496
HpyF10VI	GCNNNNNNNGC	9 cut(s)	536, 1382, 1508, 1699, 1708, 1902, 1928, 2006, 2625
HpySE526I	ACGT	6 cut(s)	525, 1368, 1844, 1993, 2445, 2496
Hsp92I	GRCGYC	1 cut(s)	59
Kpn2I	TCCGGA	1 cut(s)	1935
KpnI	GGTACC	1 cut(s)	1646
KroI	GCCGGC	1 cut(s)	372
KroNI	GCCGGC	1 cut(s)	374
KspAI	GTTAAC	1 cut(s)	991
LmnI	GCTCC	5 cut(s)	646, 2251, 2477, 2640, 2676
LweI	GCATC	5 cut(s)	400, 733, 1274, 1363, 2469
MaeI	CTAG	9 cut(s)	339, 378, 674, 951, 1071, 1686, 1766, 1902, 2181
MaeII	ACGT	6 cut(s)	525, 1368, 1844, 1993, 2445, 2496
MflI	RGATCY	1 cut(s)	2158
MhlI	GDGCHC	8 cut(s)	651, 1022, 1070, 1685, 2474, 2605, 2637, 2681
MlsI	TGGCCA	1 cut(s)	624
MluNI	TGGCCA	1 cut(s)	624
MlyI	GAGTC	2 cut(s)	1232, 2012
MmeI	TCCRAC	1 cut(s)	1827
Mox20I	TGGCCA	1 cut(s)	624
Mph1103I	ATGCAT	1 cut(s)	1267
MroI	TCCGGA	1 cut(s)	1935
MroNI	GCCGGC	1 cut(s)	372
MroXI	GAANNNNTTC	1 cut(s)	402
MscI	TGGCCA	1 cut(s)	624
MslI	CAYNNNNRTG	5 cut(s)	95, 309, 789, 1036, 1156
Msp20I	TGGCCA	1 cut(s)	624
MspA1I	CMGCKG	4 cut(s)	1511, 1711, 2009, 2131
MspCI	CTTAAG	1 cut(s)	1787
MspI	CCGG	5 cut(s)	151, 373, 1026, 1356, 1936
MspR9I	CCNGG	3 cut(s)	152, 1356, 1648
Mva1269I	GAATGC	4 cut(s)	919, 1267, 1387, 1960
MvaI	CCWGG	1 cut(s)	1648
MvnI	CGCG	2 cut(s)	714, 2544
MwoI	GCNNNNNNNGC	9 cut(s)	536, 1382, 1508, 1699, 1708, 1902, 1928, 2006, 2625
NaeI	GCCGGC	1 cut(s)	374
NciI	CCSGG	2 cut(s)	152, 1356
NdeI	CATATG	1 cut(s)	1153
NgoMIV	GCCGGC	1 cut(s)	372
NheI	GCTAGC	1 cut(s)	1901
NlaIV	GGNNCC	8 cut(s)	173, 568, 1319, 1644, 1683, 1697, 2473, 2678
NmuCI	GTSAC	6 cut(s)	248, 278, 767, 803, 1122, 2104
NruI	TCGCGA	1 cut(s)	714
NsiI	ATGCAT	1 cut(s)	1267
NspI	RCATGY	1 cut(s)	1111
NspV	TTCGAA	1 cut(s)	2387
OliI	CACNNNNGTG	1 cut(s)	95
PaqCI	CACCTGC	1 cut(s)	1507
PasI	CCCWGGG	1 cut(s)	1647
PceI	AGGCCT	1 cut(s)	724
PcsI	WCGNNNNNNNCGW	1 cut(s)	2710
PctI	GAATGC	4 cut(s)	919, 1267, 1387, 1960
PdiI	GCCGGC	1 cut(s)	374
PdmI	GAANNNNTTC	1 cut(s)	402
PfeI	GAWTC	5 cut(s)	256, 386, 2264, 2341, 2381
PflMI	CCANNNNNTGG	2 cut(s)	2611, 2688
PleI	GAGTC	2 cut(s)	1232, 2011
PpsI	GAGTC	2 cut(s)	1232, 2011
Ppu21I	YACGTR	1 cut(s)	1994
PpuMI	RGGWCCY	1 cut(s)	1696
PshAI	GACNNNNGTC	1 cut(s)	1120
Psp124BI	GAGCTC	1 cut(s)	2637
Psp1406I	AACGTT	1 cut(s)	1844
Psp5II	RGGWCCY	1 cut(s)	1696
Psp6I	CCWGG	1 cut(s)	1646
PspEI	GGTNACC	1 cut(s)	803
PspFI	CCCAGC	2 cut(s)	438, 1607
PspGI	CCWGG	1 cut(s)	1646
PspN4I	GGNNCC	8 cut(s)	173, 568, 1319, 1644, 1683, 1697, 2473, 2678
PspOMI	GGGCCC	1 cut(s)	1681
PspPI	GGNCC	8 cut(s)	172, 365, 567, 1078, 1343, 1681, 1682, 1696
PspPPI	RGGWCCY	1 cut(s)	1696
PstI	CTGCAG	2 cut(s)	2319, 2621
PstNI	CAGNNNCTG	3 cut(s)	276, 1514, 1568
PsuI	RGATCY	1 cut(s)	2158
PvuII	CAGCTG	4 cut(s)	1511, 1711, 2009, 2131
RruI	TCGCGA	1 cut(s)	714
RsaI	GTAC	6 cut(s)	88, 683, 1093, 1150, 1644, 2703
RsaNI	GTAC	6 cut(s)	87, 682, 1092, 1149, 1643, 2702
RseI	CAYNNNNRTG	5 cut(s)	95, 309, 789, 1036, 1156
SacI	GAGCTC	1 cut(s)	2637
Sau96I	GGNCC	8 cut(s)	172, 365, 567, 1078, 1343, 1681, 1682, 1696
SchI	GAGTC	2 cut(s)	1232, 2012
ScrFI	CCNGG	3 cut(s)	152, 1356, 1648
SduI	GDGCHC	8 cut(s)	651, 1022, 1070, 1685, 2474, 2605, 2637, 2681
SfaNI	GCATC	5 cut(s)	400, 733, 1274, 1363, 2469
SfcI	CTRYAG	3 cut(s)	1047, 2315, 2617
SfuI	TTCGAA	1 cut(s)	2387
SinI	GGWCC	5 cut(s)	172, 567, 1078, 1343, 1696
SmiMI	CAYNNNNRTG	5 cut(s)	95, 309, 789, 1036, 1156
SmlI	CTYRAG	7 cut(s)	93, 1787, 1943, 2162, 2219, 2258, 2372
SmoI	CTYRAG	7 cut(s)	93, 1787, 1943, 2162, 2219, 2258, 2372
SseBI	AGGCCT	1 cut(s)	724
SsiI	CCGC	6 cut(s)	547, 692, 1200, 1693, 1905, 1997
SspMI	CTAG	9 cut(s)	339, 378, 674, 951, 1071, 1686, 1766, 1902, 2181
SstI	GAGCTC	1 cut(s)	2637
StuI	AGGCCT	1 cut(s)	724
StyD4I	CCNGG	3 cut(s)	150, 1354, 1646
StyI	CCWWGG	5 cut(s)	72, 328, 1629, 1685, 2277
TaaI	ACNGT	7 cut(s)	115, 580, 653, 960, 1148, 1409, 2663
TaiI	ACGT	6 cut(s)	528, 1371, 1847, 1996, 2448, 2499
TaqI	TCGA	4 cut(s)	1114, 1592, 2387, 2713
TatI	WGTACW	1 cut(s)	681
TauI	GCSGC	1 cut(s)	2000
TfiI	GAWTC	5 cut(s)	256, 386, 2264, 2341, 2381
TscAI	CASTG	9 cut(s)	277, 583, 656, 742, 832, 1414, 1542, 1569, 1643
TseFI	GTSAC	6 cut(s)	248, 278, 767, 803, 1122, 2104
Tsp45I	GTSAC	6 cut(s)	248, 278, 767, 803, 1122, 2104
TspDTI	ATGAA	8 cut(s)	342, 788, 1118, 1418, 1877, 2069, 2655, 2669
TspGWI	ACGGA	1 cut(s)	2655
TspRI	CASTG	9 cut(s)	277, 583, 656, 742, 832, 1414, 1542, 1569, 1643
Van91I	CCANNNNNTGG	2 cut(s)	2611, 2688
Vha464I	CTTAAG	1 cut(s)	1787
VpaK11BI	GGWCC	5 cut(s)	172, 567, 1078, 1343, 1696
XagI	CCTNNNNNAGG	1 cut(s)	2570
XapI	RAATTY	6 cut(s)	221, 236, 982, 1594, 1924, 2057
XceI	RCATGY	1 cut(s)	1111
XmaJI	CCTAGG	1 cut(s)	1685
XmnI	GAANNNNTTC	1 cut(s)	402
XspI	CTAG	9 cut(s)	339, 378, 674, 951, 1071, 1686, 1766, 1902, 2181
Zsp2I	ATGCAT	1 cut(s)	1267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.