Rh4AG223200

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0008859
Physical Location & Seq
Forward (+)
52278137 .. 52282687
4551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG223200.1

Sequence Viewer

Length: 2139 bp
ATGGCGTCAATGGTTGCCAAGGGGAGTAGTTGTACCACTCAGGTCTCTCCCTCTATGACTGTTCAAGAAAAGGGTACTAGAAATAAGAGGAAGTTCCGGGCTGATCCACCTTTAGGGGACCAGAATAAGATTTTGCCTTTACCTCAAACTGAATGTGCAAGTTACGAATTTTCAGCGGAAAAATTTGAAATCAGTCACCAGAATCATGGACAAACCAGTGTCTGTGACCTGTGTTTTGTTAATCAAGACCATTCTGATGGGTTGAAACTTGACCTTGGATTGTCTAGTGCTGTTGGTTCATCTGAGGTTGGCCCAAGCCGGCCTAGAAGGGAATCAGAGGCAGAAGAGTTTCAAGATGCTGATTGGAGTGATCTCACAGAAACCCAGCTTGAAGAACTTGTTATGAGCAATTTGGACACAATTTTCAAGAGTGCAATTAAAAAGATTGTTGCTTGTGGTTACACCGAAGACGTTGCTACAAAGGCGGTTTTGCGGTCTGGTCTTTGTTACGGGTCCAAAGACACTGTGTCTAATATAGTGGATAATACTTTAGTTTTTCTTAGGAGTGGCCAAGAAATTGATCCTTCAAGGGAGCACTGTTTTGAAGATTTACAGCAGCTAGAGAAGTACATATTGGCGGAACTGGTGTGTGTTCTTCGCGAGATTAGGCCTTTCTTCAGCACTGGCGATGCAATGTGGTGCTTATTGATCTGTGACATGAATGTCTCTCATGCTTGTGCAATGGATGGTGACCCCGTAAGCAGTTTCCTCAGTGATGGCGTGTCAAATGGAAGTTCACGCATTTCAAATCAACCTCAGCCCAAAACAGAAGCCAAGAGTTTAGAATTGGGTCTTCTGAATGCTGGCAAGCCGATCTCATCAATGCCTGGTTCTCCTAGTTCACAGTCTGAGACATCTAAATCAAGAAATTCGGTTAACAATGGATTACTCTTAGAAAAAGAGGGCACAACTGGAACATCTCCATCTCCTGCTGTAGAGGAAAAGCTTGTGGGCACTAGAAAGGTCCATTCTATTAGTACTAAAAGAGAATACACGCTTCGACAAAAGTCACTTCATTTGGAGAAAAATTACCGTACATATGGATGTAAAGGGTCTTCAAGAGCAGGGAAGCTGAGTGGTTTGGGCGGTTTAATTTTGGATAAGAAGTTAAAATCTGTGTCAGACTCTACCGCTCTTAATTTAAAGAATGCATCTTTGAAAATAAGCAAGGCAATGGGAGTTGATTTACCTAAAGACAATGGGAACCACATTCTTTCTTCCAATGCTGGACCTTCTTCCCCCGGAGTTTTTAACGTGGATGCTGAGAATGCTGCTTCAGTTTTGCCTATGAACAGTGTCTCATCCATGTTACCTTCTGCGAATAATTCAACAACATTACCGGCCCCCATTACTGCAAAAACATTGCCAGCAGCCGCTACTCCACCTGCATTATCAGCTGCTGATACTGAGCTTTCCCTTTCACTGCCTACAAAAAGCAACACTACCCCAGTGCCTGTTAGCTTTAATTCTGATAACTCAAATTCTATTTTTGCTGGGATGCCTTTTGACAAGTCCTTGGGGCAGTGGGTACCCAGGGACAAAAAAGATGAGATGATTTTGAAGTTGGGCCCTAGGGTGCGGGACCTGCAAAATCAGCTGCAAGAGTGGACAGAATGGGCCAACCAGAAGGTTATGCAGGCTGCCCGTAGGCTAGGTAAGGATAAGGCTGAACTGAAGTCATTAAGGCAAGAGAAAGAAGAAGTTGAACGGCTGAAGAAAGAGAAACTAACGTTGGAGGAGAACACCATGAAGAAACTTGCTGAGATGGACAATGCTTTGTGCAAGGCTAGCGGTCAGGTGGAAAAAGCAAATTCTGCCGTCCGGAGGCTTGAGGTGGAGAATGCTGCACTTAGGCAGGAGATGGAGGCTGCCAAGTTACGCGCGGCAGAGTCAGCTGCAAGCTGTCAAGAGGTATCAAAGAGGGAGAAGAAGACACTCATGAAATTTCAGTCGTGGGAAAAGCAGAAAGCCTTGTTCAGCGAAGAACTGGTGACAGAAAAACGCAAGTTAAAACAGCTGCTTCAGGAAATAGAGCAAGCCAGAGATCTCAAGGAACAATTAGAGGTATGTTCAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

712

Amino Acids

77.9

Weight (kDa)

7.45

Isoelectric Point (pI)

48.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIR2-like_helical PF20235 137 - 249 3.8e-31 PIR2-like, helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1453
AasI GACNNNNNNGTC 1 cut(s) 722
Acc36I ACCTGC 2 cut(s) 1453, 1653
Acc65I GGTACC 1 cut(s) 1588
AccB1I GGYRCC 1 cut(s) 1588
AccBSI CCGCTC 1 cut(s) 1193
AccII CGCG 3 cut(s) 660, 1941, 1943
AccIII TCCGGA 1 cut(s) 1881
AclI AACGTT 1 cut(s) 1790
AclWI GGATC 2 cut(s) 98, 575
AcoI YGGCCR 1 cut(s) 568
AcsI RAATTY 6 cut(s) 167, 182, 928, 1540, 1870, 2003
AcuI CTGAAG 5 cut(s) 661, 1320, 1754, 1793, 2066
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 6 cut(s) 34, 76, 629, 1039, 1096, 1590
AfiI CCNNNNNNNGG 2 cut(s) 113, 1884
AhdI GACNNNNNGTC 1 cut(s) 526
AjnI CCWGG 2 cut(s) 886, 1592
AjuI GAANNNNNNNTTGG 4 cut(s) 617, 649, 1775, 1807
Alw21I GWGCWC 1 cut(s) 597
Alw26I GTCTC 4 cut(s) 49, 730, 905, 1363
AlwI GGATC 2 cut(s) 98, 575
AlwNI CAGNNNCTG 3 cut(s) 222, 1460, 1514
Aor13HI TCCGGA 1 cut(s) 1881
AoxI GGCC 7 cut(s) 310, 320, 568, 668, 1401, 1627, 1677
ApaI GGGCCC 1 cut(s) 1631
ApoI RAATTY 6 cut(s) 167, 182, 928, 1540, 1870, 2003
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
Asp700I GAANNNNTTC 1 cut(s) 348
Asp718I GGTACC 1 cut(s) 1588
AspA2I CCTAGG 1 cut(s) 1631
AspLEI GCGC 1 cut(s) 1943
AsuC2I CCSGG 2 cut(s) 98, 1302
AsuHPI GGTGA 3 cut(s) 188, 761, 2062
AsuNHI GCTAGC 1 cut(s) 1847
AvaII GGWCC 5 cut(s) 118, 513, 1024, 1289, 1642
AvrII CCTAGG 1 cut(s) 1631
BaeGI GKGCMC 3 cut(s) 968, 1016, 1631
BalI TGGCCA 1 cut(s) 570
BanI GGYRCC 1 cut(s) 1588
BanII GRGCYC 1 cut(s) 1631
BarI GAAGNNNNNNTAC 2 cut(s) 1099, 1131
BbsI GAAGAC 4 cut(s) 474, 845, 1107, 1997
Bbv12I GWGCWC 1 cut(s) 597
BbvCI CCTCAGC 1 cut(s) 816
BccI CCATC 6 cut(s) 251, 740, 770, 991, 1819, 1915
BceAI ACGGC 2 cut(s) 1784, 1862
BcgI CGANNNNNNTGC 2 cut(s) 455, 489
BciT130I CCWGG 2 cut(s) 888, 1594
BcnI CCSGG 2 cut(s) 98, 1302
BcoDI GTCTC 4 cut(s) 49, 730, 905, 1363
BfaI CTAG 9 cut(s) 78, 285, 324, 620, 897, 1017, 1632, 1712, 1848
BfmI CTRYAG 1 cut(s) 993
BfuAI ACCTGC 2 cut(s) 1453, 1653
BglII AGATCT 1 cut(s) 2104
BlnI CCTAGG 1 cut(s) 1631
BmcAI AGTACT 1 cut(s) 1039
Bme1390I CCNGG 4 cut(s) 98, 888, 1302, 1594
Bme18I GGWCC 5 cut(s) 118, 513, 1024, 1289, 1642
BmeRI GACNNNNNGTC 1 cut(s) 526
BmiI GGNNCC 7 cut(s) 119, 514, 1265, 1404, 1590, 1629, 1643
BmrFI CCNGG 4 cut(s) 98, 888, 1302, 1594
BmrI ACTGGG 1 cut(s) 1502
BmsI GCATC 5 cut(s) 346, 679, 1220, 1309, 1548
BmtI GCTAGC 1 cut(s) 1851
BmuI ACTGGG 1 cut(s) 1502
BoxI GACNNNNGTC 1 cut(s) 1066
BpiI GAAGAC 4 cut(s) 474, 845, 1107, 1997
Bpu10I CCTNAGC 1 cut(s) 816
BpuEI CTTGAG 2 cut(s) 1910, 2093
BpuMI CCSGG 2 cut(s) 98, 1302
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 49
BsaJI CCNNGG 7 cut(s) 18, 274, 1300, 1575, 1592, 1593, 1631
BsaWI WCCGGW 1 cut(s) 1881
BsaXI ACNNNNNCTCC 2 cut(s) 16, 46
Bsc4I CCNNNNNNNGG 2 cut(s) 113, 1884
Bse118I RCCGGY 2 cut(s) 318, 1399
Bse1I ACTGG 6 cut(s) 216, 648, 688, 976, 1508, 2052
Bse3DI GCAATG 4 cut(s) 699, 747, 1239, 1421
BseAI TCCGGA 1 cut(s) 1881
BseBI CCWGG 2 cut(s) 888, 1594
BseDI CCNNGG 7 cut(s) 18, 274, 1300, 1575, 1592, 1593, 1631
BseGI GGATG 5 cut(s) 751, 1109, 1324, 1361, 1563
BseLI CCNNNNNNNGG 2 cut(s) 113, 1884
BseMI GCAATG 4 cut(s) 699, 747, 1239, 1421
BseMII CTCAG 9 cut(s) 53, 294, 784, 830, 900, 1124, 1314, 1458, 1812
BseNI ACTGG 6 cut(s) 216, 648, 688, 976, 1508, 2052
BseRI GAGGAG 1 cut(s) 1811
BseSI GKGCMC 3 cut(s) 968, 1016, 1631
BseYI CCCAGC 2 cut(s) 384, 1553
BsgI GTGCAG 1 cut(s) 1890
Bsh1236I CGCG 3 cut(s) 660, 1941, 1943
BshFI GGCC 7 cut(s) 312, 322, 570, 670, 1403, 1629, 1679
BshNI GGYRCC 1 cut(s) 1588
BsiHKAI GWGCWC 1 cut(s) 597
BsiSI CCGG 5 cut(s) 97, 319, 1302, 1400, 1882
BslFI GGGAC 3 cut(s) 131, 1610, 1655
BslI CCNNNNNNNGG 2 cut(s) 113, 1884
BsmAI GTCTC 4 cut(s) 49, 730, 905, 1363
BsmFI GGGAC 3 cut(s) 131, 1610, 1655
BsmI GAATGC 4 cut(s) 865, 1213, 1333, 1906
BsnI GGCC 7 cut(s) 312, 322, 570, 670, 1403, 1629, 1679
Bso31I GGTCTC 1 cut(s) 49
Bsp120I GGGCCC 1 cut(s) 1627
Bsp1286I GDGCHC 4 cut(s) 597, 968, 1016, 1631
Bsp13I TCCGGA 1 cut(s) 1881
Bsp143I GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
Bsp68I TCGCGA 1 cut(s) 660
BspANI GGCC 7 cut(s) 312, 322, 570, 670, 1403, 1629, 1679
BspCNI CTCAG 9 cut(s) 52, 295, 783, 829, 901, 1125, 1315, 1459, 1813
BspEI TCCGGA 1 cut(s) 1881
BspFNI CGCG 3 cut(s) 660, 1941, 1943
BspHI TCATGA 1 cut(s) 1998
BspLI GGNNCC 7 cut(s) 119, 514, 1265, 1404, 1590, 1629, 1643
BspMI ACCTGC 2 cut(s) 1453, 1653
BspOI GCTAGC 1 cut(s) 1851
BspPI GGATC 2 cut(s) 98, 575
BspT107I GGYRCC 1 cut(s) 1588
BspTNI GGTCTC 1 cut(s) 49
BsrBI CCGCTC 1 cut(s) 1193
BsrDI GCAATG 4 cut(s) 699, 747, 1239, 1421
BsrFI RCCGGY 2 cut(s) 318, 1399
BsrI ACTGG 6 cut(s) 216, 648, 688, 976, 1508, 2052
BssAI RCCGGY 2 cut(s) 318, 1399
BssECI CCNNGG 7 cut(s) 18, 274, 1300, 1575, 1592, 1593, 1631
BssMI GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 4 cut(s) 18, 274, 1575, 1631
Bst2UI CCWGG 2 cut(s) 888, 1594
Bst4CI ACNGT 6 cut(s) 61, 526, 599, 906, 1094, 1355
Bst6I CTCTTC 1 cut(s) 339
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 1874
BstC8I GCNNGC 8 cut(s) 320, 865, 869, 1428, 1698, 1849, 1960, 2097
BstEII GGTNACC 1 cut(s) 749
BstF5I GGATG 5 cut(s) 751, 1109, 1324, 1361, 1563
BstFNI CGCG 3 cut(s) 660, 1941, 1943
BstHHI GCGC 1 cut(s) 1943
BstKTI GATC 6 cut(s) 106, 373, 583, 711, 876, 2107
BstMAI GTCTC 4 cut(s) 49, 730, 905, 1363
BstMBI GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
BstMWI GCNNNNNNNGC 8 cut(s) 482, 1328, 1454, 1645, 1654, 1848, 1874, 1952
BstNI CCWGG 2 cut(s) 888, 1594
BstPAI GACNNNNGTC 1 cut(s) 1066
BstPI GGTNACC 1 cut(s) 749
BstSCI CCNGG 4 cut(s) 96, 886, 1300, 1592
BstSFI CTRYAG 1 cut(s) 993
BstSLI GKGCMC 3 cut(s) 968, 1016, 1631
BstUI CGCG 3 cut(s) 660, 1941, 1943
BstV2I GAAGAC 4 cut(s) 474, 845, 1107, 1997
BstX2I RGATCY 1 cut(s) 2104
BstXI CCANNNNNNTGG 2 cut(s) 206, 257
BstYI RGATCY 1 cut(s) 2104
BsuRI GGCC 7 cut(s) 312, 322, 570, 670, 1403, 1629, 1679
BtgZI GCGATG 1 cut(s) 702
BtsCI GGATG 5 cut(s) 751, 1109, 1324, 1361, 1563
BtsI GCAGTG 2 cut(s) 1481, 1589
BtsIMutI CAGTG 9 cut(s) 223, 522, 595, 681, 778, 1360, 1481, 1515, 1589
BtuMI TCGCGA 1 cut(s) 660
BveI ACCTGC 2 cut(s) 1453, 1653
Cac8I GCNNGC 8 cut(s) 320, 865, 869, 1428, 1698, 1849, 1960, 2097
CaiI CAGNNNCTG 3 cut(s) 222, 1460, 1514
CciI TCATGA 1 cut(s) 1998
CfoI GCGC 1 cut(s) 1943
Cfr10I RCCGGY 2 cut(s) 318, 1399
Csp6I GTAC 6 cut(s) 33, 75, 628, 1038, 1095, 1589
CviAII CATG 6 cut(s) 206, 718, 731, 1366, 1807, 1999
CviQI GTAC 6 cut(s) 33, 75, 628, 1038, 1095, 1589
DpnI GATC 6 cut(s) 105, 372, 582, 710, 875, 2106
DpnII GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
DraI TTTAAA 1 cut(s) 1203
DrdI GACNNNNNNGTC 1 cut(s) 722
DriI GACNNNNNGTC 1 cut(s) 526
DseDI GACNNNNNNGTC 1 cut(s) 722
EaeI YGGCCR 1 cut(s) 568
Eam1104I CTCTTC 1 cut(s) 339
Eam1105I GACNNNNNGTC 1 cut(s) 526
EarI CTCTTC 1 cut(s) 339
EciI GGCGGA 1 cut(s) 653
Eco130I CCWWGG 4 cut(s) 18, 274, 1575, 1631
Eco147I AGGCCT 1 cut(s) 670
Eco24I GRGCYC 1 cut(s) 1631
Eco31I GGTCTC 1 cut(s) 49
Eco47I GGWCC 5 cut(s) 118, 513, 1024, 1289, 1642
Eco57I CTGAAG 5 cut(s) 661, 1320, 1754, 1793, 2066
Eco91I GGTNACC 1 cut(s) 749
EcoO109I RGGNCCY 2 cut(s) 1628, 1642
EcoO65I GGTNACC 1 cut(s) 749
EcoRII CCWGG 2 cut(s) 886, 1592
EcoT14I CCWWGG 4 cut(s) 18, 274, 1575, 1631
EcoT22I ATGCAT 1 cut(s) 1213
EcoT38I GRGCYC 1 cut(s) 1631
ErhI CCWWGG 4 cut(s) 18, 274, 1575, 1631
FaeI CATG 6 cut(s) 209, 721, 734, 1369, 1810, 2002
FaqI GGGAC 3 cut(s) 131, 1610, 1655
FatI CATG 6 cut(s) 205, 717, 730, 1365, 1806, 1998
FauI CCCGC 1 cut(s) 1632
FauNDI CATATG 1 cut(s) 1099
FokI GGATG 5 cut(s) 758, 1116, 1331, 1348, 1570
FriOI GRGCYC 1 cut(s) 1631
FspBI CTAG 9 cut(s) 78, 285, 324, 620, 897, 1017, 1632, 1712, 1848
GlaI GCGC 1 cut(s) 1942
GsaI CCCAGC 2 cut(s) 388, 1557
HaeIII GGCC 7 cut(s) 312, 322, 570, 670, 1403, 1629, 1679
HapII CCGG 5 cut(s) 97, 319, 1302, 1400, 1882
HhaI GCGC 1 cut(s) 1943
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 209, 721, 734, 1369, 1810, 2002
Hin6I GCGC 1 cut(s) 1941
HinP1I GCGC 1 cut(s) 1941
HincII GTYRAC 1 cut(s) 937
HindII GTYRAC 1 cut(s) 937
HindIII AAGCTT 1 cut(s) 1004
HinfI GANTC 4 cut(s) 202, 332, 1184, 1949
HpaI GTTAAC 1 cut(s) 937
HpaII CCGG 5 cut(s) 97, 319, 1302, 1400, 1882
HphI GGTGA 3 cut(s) 188, 761, 2062
Hpy166II GTNNAC 4 cut(s) 797, 902, 937, 1668
Hpy188I TCNGA 7 cut(s) 256, 304, 337, 858, 910, 1183, 1531
Hpy8I GTNNAC 4 cut(s) 797, 902, 937, 1668
HpyAV CCTTC 5 cut(s) 321, 594, 1302, 1383, 1681
HpyCH4III ACNGT 6 cut(s) 61, 526, 599, 906, 1094, 1355
HpyCH4IV ACGT 3 cut(s) 471, 1314, 1790
HpyF10VI GCNNNNNNNGC 8 cut(s) 482, 1328, 1454, 1645, 1654, 1848, 1874, 1952
HpySE526I ACGT 3 cut(s) 471, 1314, 1790
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 209, 721, 734, 1369, 1810, 2002
HspAI GCGC 1 cut(s) 1941
Kpn2I TCCGGA 1 cut(s) 1881
KpnI GGTACC 1 cut(s) 1592
KroI GCCGGC 1 cut(s) 318
KroNI GCCGGC 1 cut(s) 320
KspAI GTTAAC 1 cut(s) 937
Kzo9I GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
LmnI GCTCC 1 cut(s) 592
LweI GCATC 5 cut(s) 346, 679, 1220, 1309, 1548
MaeI CTAG 9 cut(s) 78, 285, 324, 620, 897, 1017, 1632, 1712, 1848
MaeII ACGT 3 cut(s) 471, 1314, 1790
MalI GATC 6 cut(s) 105, 372, 582, 710, 875, 2106
MbiI CCGCTC 1 cut(s) 1193
MboI GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
MflI RGATCY 1 cut(s) 2104
MhlI GDGCHC 4 cut(s) 597, 968, 1016, 1631
MlsI TGGCCA 1 cut(s) 570
MluNI TGGCCA 1 cut(s) 570
MlyI GAGTC 2 cut(s) 1178, 1958
MmeI TCCRAC 1 cut(s) 1773
Mox20I TGGCCA 1 cut(s) 570
Mph1103I ATGCAT 1 cut(s) 1213
MroI TCCGGA 1 cut(s) 1881
MroNI GCCGGC 1 cut(s) 318
MroXI GAANNNNTTC 1 cut(s) 348
MscI TGGCCA 1 cut(s) 570
MslI CAYNNNNRTG 3 cut(s) 255, 735, 1102
Msp20I TGGCCA 1 cut(s) 570
MspA1I CMGCKG 5 cut(s) 176, 1457, 1657, 1955, 2077
MspI CCGG 5 cut(s) 97, 319, 1302, 1400, 1882
MspR9I CCNGG 4 cut(s) 98, 888, 1302, 1594
Mva1269I GAATGC 4 cut(s) 865, 1213, 1333, 1906
MvaI CCWGG 2 cut(s) 888, 1594
MvnI CGCG 3 cut(s) 660, 1941, 1943
MwoI GCNNNNNNNGC 8 cut(s) 482, 1328, 1454, 1645, 1654, 1848, 1874, 1952
NaeI GCCGGC 1 cut(s) 320
NciI CCSGG 2 cut(s) 98, 1302
NdeI CATATG 1 cut(s) 1099
NdeII GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
NgoMIV GCCGGC 1 cut(s) 318
NheI GCTAGC 1 cut(s) 1847
NlaIII CATG 6 cut(s) 209, 721, 734, 1369, 1810, 2002
NlaIV GGNNCC 7 cut(s) 119, 514, 1265, 1404, 1590, 1629, 1643
NmuCI GTSAC 6 cut(s) 194, 224, 713, 749, 1068, 2050
NruI TCGCGA 1 cut(s) 660
NsiI ATGCAT 1 cut(s) 1213
PagI TCATGA 1 cut(s) 1998
PaqCI CACCTGC 1 cut(s) 1453
PasI CCCWGGG 1 cut(s) 1593
PceI AGGCCT 1 cut(s) 670
PctI GAATGC 4 cut(s) 865, 1213, 1333, 1906
PdiI GCCGGC 1 cut(s) 320
PdmI GAANNNNTTC 1 cut(s) 348
PfeI GAWTC 2 cut(s) 202, 332
PleI GAGTC 2 cut(s) 1178, 1957
PpsI GAGTC 2 cut(s) 1178, 1957
PpuMI RGGWCCY 1 cut(s) 1642
PshAI GACNNNNGTC 1 cut(s) 1066
Psp1406I AACGTT 1 cut(s) 1790
Psp5II RGGWCCY 1 cut(s) 1642
Psp6I CCWGG 2 cut(s) 886, 1592
PspEI GGTNACC 1 cut(s) 749
PspFI CCCAGC 2 cut(s) 384, 1553
PspGI CCWGG 2 cut(s) 886, 1592
PspN4I GGNNCC 7 cut(s) 119, 514, 1265, 1404, 1590, 1629, 1643
PspOMI GGGCCC 1 cut(s) 1627
PspPPI RGGWCCY 1 cut(s) 1642
PstNI CAGNNNCTG 3 cut(s) 222, 1460, 1514
PsuI RGATCY 1 cut(s) 2104
PvuII CAGCTG 4 cut(s) 1457, 1657, 1955, 2077
RruI TCGCGA 1 cut(s) 660
RsaI GTAC 6 cut(s) 34, 76, 629, 1039, 1096, 1590
RsaNI GTAC 6 cut(s) 33, 75, 628, 1038, 1095, 1589
RseI CAYNNNNRTG 3 cut(s) 255, 735, 1102
Sau3AI GATC 6 cut(s) 103, 370, 580, 708, 873, 2104
ScaI AGTACT 1 cut(s) 1039
SchI GAGTC 2 cut(s) 1178, 1958
ScrFI CCNGG 4 cut(s) 98, 888, 1302, 1594
SduI GDGCHC 4 cut(s) 597, 968, 1016, 1631
SfaNI GCATC 5 cut(s) 346, 679, 1220, 1309, 1548
SfcI CTRYAG 1 cut(s) 993
SinI GGWCC 5 cut(s) 118, 513, 1024, 1289, 1642
SmiMI CAYNNNNRTG 3 cut(s) 255, 735, 1102
SmlI CTYRAG 2 cut(s) 1889, 2108
SmoI CTYRAG 2 cut(s) 1889, 2108
SseBI AGGCCT 1 cut(s) 670
SspMI CTAG 9 cut(s) 78, 285, 324, 620, 897, 1017, 1632, 1712, 1848
StuI AGGCCT 1 cut(s) 670
StyD4I CCNGG 4 cut(s) 96, 886, 1300, 1592
StyI CCWWGG 4 cut(s) 18, 274, 1575, 1631
TaaI ACNGT 6 cut(s) 61, 526, 599, 906, 1094, 1355
TaiI ACGT 3 cut(s) 474, 1317, 1793
TaqI TCGA 1 cut(s) 1060
TatI WGTACW 2 cut(s) 627, 1037
TauI GCSGC 2 cut(s) 1436, 1946
TfiI GAWTC 2 cut(s) 202, 332
TscAI CASTG 9 cut(s) 223, 529, 602, 688, 778, 1360, 1488, 1515, 1589
TseFI GTSAC 6 cut(s) 194, 224, 713, 749, 1068, 2050
Tsp45I GTSAC 6 cut(s) 194, 224, 713, 749, 1068, 2050
TspDTI ATGAA 6 cut(s) 288, 734, 1064, 1364, 1823, 2015
TspRI CASTG 9 cut(s) 223, 529, 602, 688, 778, 1360, 1488, 1515, 1589
VpaK11BI GGWCC 5 cut(s) 118, 513, 1024, 1289, 1642
XapI RAATTY 6 cut(s) 167, 182, 928, 1540, 1870, 2003
XmaJI CCTAGG 1 cut(s) 1631
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 9 cut(s) 78, 285, 324, 620, 897, 1017, 1632, 1712, 1848
ZrmI AGTACT 1 cut(s) 1039
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.