Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0015433.1

Orthogroup ID

OG0008859

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 2582

Gene Structure 2582 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0015433.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

atgactgttcaagaaaagggtagtagaaataagaggaagttccgggctgatccacctttaggggaccagaataagattttgcctttacctcaaactgaatgtgcaagttacgaattttcagcggaaaaatttgaaatcagtcaccagaatcatggacaaaccagtgtctgtgacctgtgttttgttaatcaagaccattctgatgggttgaaacttgaccttggattgtctagtgctgttggttcatctgaggttggcccaagccggactagaagggaatcagaggcagaagagtttcaagatgctgattggagtgatctcacagaaacccagcttgaagaacttgttatgaacaatttggactcaattttcaagagtgcaattaaaaagattgttgcttgtggttacaccgaagacgttgctacaaaggctgttttgcggtctggtctttgttatgggtccaaagacactgtgtctaatatagtggataatactttagtttttcttaggagtggccaagaaattgatccttcaagggagcactgttttgaagatttacagcaactagagaagtacatattggcggaactggtgtgtgttcttcgcgagattaggcctttcttcagcactggcgatgcaatgtggtgcttattgatctgtgacatgaatgtctctcatgcttgtgcaatggatggtgaccccataagcagtttcctcagtgatggcgtgtcaaatggaagttcacccatttcaaatcaacctcagcccaaaacagaagccaagagtttagaattgggtcttctgaatgctggtaagccgagctcatcaatgcctggttctcctagttcacagtctgagacatctaaaccaagaaattcggttaacaatggattactcttagaaaaagagggcacaaccggaacatctccatctcctgctgtagaggaaaagcttgtgggcactagaaaggtccattctattagtactaaaagagaatacatgcttcgacaaaagtcacttcatttggagaaaaattaccgtacatatggatgtaaagggtcttcaagagcagggaagctgagtggtttgggcggtttaattttggataagaagttaaaatctgtgtcagactctaccgctcttaatttaaagaatgcatctttgaaaataagcaaggcaatgggagttgatttgcctaaagacaatgggaaccacattctttcttccaatgctggaccttcttcccctggagtttttaacgtggatgctgagaatgctgcttcagttttgcctatgaacagtgtctcatccatgttaccttctgcgaataattcaacaacattaccggcccccattactgcaaaaacattgccagcagccgctactccacctgcattatcagctgctgatactgagctttccctttcactgcctacaaaaagcaacactaccccagtgcctgttagctttaattctgataactcaaattctatttttgctgggatgccttttgataagtccttggggcagtgggtacccagggacaaaaaagatgagatgattttgaagttgggccctagggtgcgggacctgcaaaatcagctgcaagagtggacagaatgggctaaccagaaggttatgcaggctgcccgtaggctaggtaaggataaggctgaactgaagtcattaaggcaagagaaagaagaagttgaacggctgaagaaagagaaactaacgttggaggagaacaccatgaagaaacttgctgagatggacaatgctttgtgcaaggctagcggtcaggtggaaaaagcaaattctgccgtccggaggcttgaggtggagaatgctgcactaaggcaggagatggaggctgccaagttacgcgcggcagagtctgctgcaagctgtcaagaggtatcaaagagggagaagaagacactcacgaaatttcagtcgtgggaaaagcagaaagccttgttcagcgaagaactggtgacagaaaaacgcaagttaaaacagctgcttcaggaaatagagcaagccagagatctcaaggaacaattagag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

690

Amino Acids

75.67

Weight (kDa)

6.54

Isoelectric Point (pI)

49.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008859)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g16660 FvH4_4g16660 FvH4_4g16660 FvH4_4g16660
malus_domestica	MD13G1177600.v1.1 MD16G1179600.v1.1
prunus_persica	Prupe.1G146600_v2.0.a1 Prupe.1G146600_v2.0.a1 Prupe.1G146600_v2.0.a1 Prupe.1G146600_v2.0.a1
pyrus_communis	pycom13g15320
rosa_chinensis	RchiOBHm_Chr4g0420121
rosa_laevigata	RLG00000007787
rosa_multiflora	Rmu_sc0015433.1_g000001 Rmu_sc0023895.1_g000001
rosa_roxburghii	Rroxscaffold_5G00362830
rosa_rugosa	Rorug04G0162300 Rorug04G0162400
rosa_samantha	Rh4AG223200 Rh4BG225600 Rh4CG236400 Rh4DG222000
rosa_wichuraiana	Rw4G019210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1399
AasI	GACNNNNNNGTC	1 cut(s)	668
Acc36I	ACCTGC	2 cut(s)	1399, 1599
Acc65I	GGTACC	1 cut(s)	1534
AccB1I	GGYRCC	1 cut(s)	1534
AccBSI	CCGCTC	1 cut(s)	1139
AccII	CGCG	3 cut(s)	606, 1887, 1889
AccIII	TCCGGA	1 cut(s)	1827
AciI	CCGC	9 cut(s)	122, 439, 584, 1092, 1137, 1380, 1585, 1797, 1889
AclI	AACGTT	1 cut(s)	1736
AclWI	GGATC	2 cut(s)	44, 521
AcoI	YGGCCR	1 cut(s)	514
AcsI	RAATTY	6 cut(s)	113, 128, 874, 1486, 1816, 1949
AcuI	CTGAAG	5 cut(s)	607, 1266, 1700, 1739, 2012
AfaI	GTAC	4 cut(s)	575, 985, 1042, 1536
AfiI	CCNNNNNNNGG	2 cut(s)	59, 1830
AhdI	GACNNNNNGTC	1 cut(s)	472
AjnI	CCWGG	3 cut(s)	832, 1246, 1538
AjuI	GAANNNNNNNTTGG	4 cut(s)	563, 595, 1721, 1753
Alw21I	GWGCWC	2 cut(s)	543, 824
Alw26I	GTCTC	3 cut(s)	676, 851, 1309
AlwI	GGATC	2 cut(s)	44, 521
AlwNI	CAGNNNCTG	4 cut(s)	168, 1406, 1460, 1898
Aor13HI	TCCGGA	1 cut(s)	1827
AoxI	GGCC	5 cut(s)	256, 514, 614, 1347, 1573
ApaI	GGGCCC	1 cut(s)	1577
ApeKI	GCWGC	9 cut(s)	1277, 1376, 1403, 1603, 1646, 1850, 1874, 1901, 2023
ApoI	RAATTY	6 cut(s)	113, 128, 874, 1486, 1816, 1949
ArsI	GACNNNNNNTTYG	4 cut(s)	164, 196, 1940, 1972
Asp700I	GAANNNNTTC	1 cut(s)	294
Asp718I	GGTACC	1 cut(s)	1534
AspA2I	CCTAGG	1 cut(s)	1577
AspLEI	GCGC	1 cut(s)	1889
AspS9I	GGNCC	9 cut(s)	64, 257, 459, 970, 1235, 1348, 1573, 1574, 1588
AsuC2I	CCSGG	1 cut(s)	44
AsuHPI	GGTGA	4 cut(s)	134, 707, 735, 2008
AsuNHI	GCTAGC	1 cut(s)	1793
AvaII	GGWCC	5 cut(s)	64, 459, 970, 1235, 1588
AvrII	CCTAGG	1 cut(s)	1577
BaeGI	GKGCMC	3 cut(s)	914, 962, 1577
BalI	TGGCCA	1 cut(s)	516
BanI	GGYRCC	1 cut(s)	1534
BanII	GRGCYC	2 cut(s)	824, 1577
BarI	GAAGNNNNNNTAC	2 cut(s)	1045, 1077
BbsI	GAAGAC	4 cut(s)	420, 791, 1053, 1943
Bbv12I	GWGCWC	2 cut(s)	543, 824
BbvCI	CCTCAGC	1 cut(s)	762
BbvI	GCAGC	9 cut(s)	1264, 1388, 1390, 1590, 1633, 1837, 1861, 1888, 2010
BccI	CCATC	6 cut(s)	197, 686, 716, 937, 1765, 1861
BceAI	ACGGC	2 cut(s)	1730, 1808
BcgI	CGANNNNNNTGC	2 cut(s)	401, 435
BciT130I	CCWGG	3 cut(s)	834, 1248, 1540
BcnI	CCSGG	1 cut(s)	44
BcoDI	GTCTC	3 cut(s)	676, 851, 1309
BfaI	CTAG	8 cut(s)	231, 270, 566, 843, 963, 1578, 1658, 1794
BfmI	CTRYAG	1 cut(s)	939
BfuAI	ACCTGC	2 cut(s)	1399, 1599
BglII	AGATCT	1 cut(s)	2050
BlnI	CCTAGG	1 cut(s)	1577
BmcAI	AGTACT	1 cut(s)	985
Bme1390I	CCNGG	4 cut(s)	44, 834, 1248, 1540
Bme18I	GGWCC	5 cut(s)	64, 459, 970, 1235, 1588
BmeRI	GACNNNNNGTC	1 cut(s)	472
BmgT120I	GGNCC	9 cut(s)	64, 257, 459, 970, 1235, 1348, 1573, 1574, 1588
BmiI	GGNNCC	7 cut(s)	65, 460, 1211, 1350, 1536, 1575, 1589
BmrFI	CCNGG	4 cut(s)	44, 834, 1248, 1540
BmrI	ACTGGG	1 cut(s)	1448
BmsI	GCATC	5 cut(s)	292, 625, 1166, 1255, 1494
BmtI	GCTAGC	1 cut(s)	1797
BmuI	ACTGGG	1 cut(s)	1448
BoxI	GACNNNNGTC	1 cut(s)	1012
BpiI	GAAGAC	4 cut(s)	420, 791, 1053, 1943
BpmI	CTGGAG	1 cut(s)	1269
Bpu10I	CCTNAGC	1 cut(s)	762
BpuEI	CTTGAG	2 cut(s)	1856, 2039
BpuMI	CCSGG	1 cut(s)	44
BsaJI	CCNNGG	6 cut(s)	220, 1246, 1521, 1538, 1539, 1577
BsaWI	WCCGGW	2 cut(s)	917, 1827
Bsc4I	CCNNNNNNNGG	2 cut(s)	59, 1830
Bse118I	RCCGGY	1 cut(s)	1345
Bse1I	ACTGG	5 cut(s)	162, 594, 634, 1454, 1998
Bse3DI	GCAATG	4 cut(s)	645, 693, 1185, 1367
BseAI	TCCGGA	1 cut(s)	1827
BseBI	CCWGG	3 cut(s)	834, 1248, 1540
BseDI	CCNNGG	6 cut(s)	220, 1246, 1521, 1538, 1539, 1577
BseGI	GGATG	5 cut(s)	697, 1055, 1270, 1307, 1509
BseLI	CCNNNNNNNGG	2 cut(s)	59, 1830
BseMI	GCAATG	4 cut(s)	645, 693, 1185, 1367
BseMII	CTCAG	8 cut(s)	240, 730, 776, 846, 1070, 1260, 1404, 1758
BseNI	ACTGG	5 cut(s)	162, 594, 634, 1454, 1998
BseRI	GAGGAG	1 cut(s)	1757
BseSI	GKGCMC	3 cut(s)	914, 962, 1577
BseXI	GCAGC	9 cut(s)	1264, 1388, 1390, 1590, 1633, 1837, 1861, 1888, 2010
BseYI	CCCAGC	2 cut(s)	330, 1499
BsgI	GTGCAG	1 cut(s)	1836
Bsh1236I	CGCG	3 cut(s)	606, 1887, 1889
BshFI	GGCC	5 cut(s)	258, 516, 616, 1349, 1575
BshNI	GGYRCC	1 cut(s)	1534
BsiHKAI	GWGCWC	2 cut(s)	543, 824
BsiSI	CCGG	5 cut(s)	43, 265, 918, 1346, 1828
BslFI	GGGAC	3 cut(s)	77, 1556, 1601
BslI	CCNNNNNNNGG	2 cut(s)	59, 1830
BsmAI	GTCTC	3 cut(s)	676, 851, 1309
BsmFI	GGGAC	3 cut(s)	77, 1556, 1601
BsmI	GAATGC	4 cut(s)	811, 1159, 1279, 1852
BsnI	GGCC	5 cut(s)	258, 516, 616, 1349, 1575
Bsp120I	GGGCCC	1 cut(s)	1573
Bsp1286I	GDGCHC	5 cut(s)	543, 824, 914, 962, 1577
Bsp13I	TCCGGA	1 cut(s)	1827
Bsp143I	GATC	5 cut(s)	49, 316, 526, 654, 2050
Bsp68I	TCGCGA	1 cut(s)	606
BspACI	CCGC	9 cut(s)	122, 439, 584, 1092, 1137, 1380, 1585, 1797, 1889
BspANI	GGCC	5 cut(s)	258, 516, 616, 1349, 1575
BspCNI	CTCAG	8 cut(s)	241, 729, 775, 847, 1071, 1261, 1405, 1759
BspEI	TCCGGA	1 cut(s)	1827
BspFNI	CGCG	3 cut(s)	606, 1887, 1889
BspLI	GGNNCC	7 cut(s)	65, 460, 1211, 1350, 1536, 1575, 1589
BspMI	ACCTGC	2 cut(s)	1399, 1599
BspOI	GCTAGC	1 cut(s)	1797
BspPI	GGATC	2 cut(s)	44, 521
BspT107I	GGYRCC	1 cut(s)	1534
BsrBI	CCGCTC	1 cut(s)	1139
BsrDI	GCAATG	4 cut(s)	645, 693, 1185, 1367
BsrFI	RCCGGY	1 cut(s)	1345
BsrI	ACTGG	5 cut(s)	162, 594, 634, 1454, 1998
BssAI	RCCGGY	1 cut(s)	1345
BssECI	CCNNGG	6 cut(s)	220, 1246, 1521, 1538, 1539, 1577
BssMI	GATC	5 cut(s)	49, 316, 526, 654, 2050
BssT1I	CCWWGG	3 cut(s)	220, 1521, 1577
Bst2UI	CCWGG	3 cut(s)	834, 1248, 1540
Bst4CI	ACNGT	6 cut(s)	7, 472, 545, 852, 1040, 1301
Bst6I	CTCTTC	1 cut(s)	285
BstAPI	GCANNNNNTGC	2 cut(s)	1820, 1898
BstC8I	GCNNGC	5 cut(s)	1374, 1644, 1795, 1906, 2043
BstEII	GGTNACC	1 cut(s)	695
BstF5I	GGATG	5 cut(s)	697, 1055, 1270, 1307, 1509
BstFNI	CGCG	3 cut(s)	606, 1887, 1889
BstHHI	GCGC	1 cut(s)	1889
BstKTI	GATC	5 cut(s)	52, 319, 529, 657, 2053
BstMAI	GTCTC	3 cut(s)	676, 851, 1309
BstMBI	GATC	5 cut(s)	49, 316, 526, 654, 2050
BstMWI	GCNNNNNNNGC	8 cut(s)	428, 1274, 1400, 1591, 1600, 1794, 1820, 1898
BstNI	CCWGG	3 cut(s)	834, 1248, 1540
BstNSI	RCATGY	1 cut(s)	1003
BstPAI	GACNNNNGTC	1 cut(s)	1012
BstPI	GGTNACC	1 cut(s)	695
BstSCI	CCNGG	4 cut(s)	42, 832, 1246, 1538
BstSFI	CTRYAG	1 cut(s)	939
BstSLI	GKGCMC	3 cut(s)	914, 962, 1577
BstUI	CGCG	3 cut(s)	606, 1887, 1889
BstV1I	GCAGC	9 cut(s)	1264, 1388, 1390, 1590, 1633, 1837, 1861, 1888, 2010
BstV2I	GAAGAC	4 cut(s)	420, 791, 1053, 1943
BstX2I	RGATCY	1 cut(s)	2050
BstXI	CCANNNNNNTGG	2 cut(s)	152, 203
BstYI	RGATCY	1 cut(s)	2050
BsuRI	GGCC	5 cut(s)	258, 516, 616, 1349, 1575
BtgZI	GCGATG	1 cut(s)	648
BtsCI	GGATG	5 cut(s)	697, 1055, 1270, 1307, 1509
BtsI	GCAGTG	2 cut(s)	1427, 1535
BtsIMutI	CAGTG	9 cut(s)	169, 468, 541, 627, 724, 1306, 1427, 1461, 1535
BtuMI	TCGCGA	1 cut(s)	606
BveI	ACCTGC	2 cut(s)	1399, 1599
Cac8I	GCNNGC	5 cut(s)	1374, 1644, 1795, 1906, 2043
CaiI	CAGNNNCTG	4 cut(s)	168, 1406, 1460, 1898
CfoI	GCGC	1 cut(s)	1889
Cfr10I	RCCGGY	1 cut(s)	1345
Cfr13I	GGNCC	9 cut(s)	64, 257, 459, 970, 1235, 1348, 1573, 1574, 1588
Csp6I	GTAC	4 cut(s)	574, 984, 1041, 1535
CviAII	CATG	6 cut(s)	152, 664, 677, 1000, 1312, 1753
CviQI	GTAC	4 cut(s)	574, 984, 1041, 1535
DpnI	GATC	5 cut(s)	51, 318, 528, 656, 2052
DpnII	GATC	5 cut(s)	49, 316, 526, 654, 2050
DraI	TTTAAA	1 cut(s)	1149
DrdI	GACNNNNNNGTC	1 cut(s)	668
DriI	GACNNNNNGTC	1 cut(s)	472
DseDI	GACNNNNNNGTC	1 cut(s)	668
EaeI	YGGCCR	1 cut(s)	514
Eam1104I	CTCTTC	1 cut(s)	285
Eam1105I	GACNNNNNGTC	1 cut(s)	472
EarI	CTCTTC	1 cut(s)	285
EciI	GGCGGA	1 cut(s)	599
Ecl136II	GAGCTC	1 cut(s)	822
Eco130I	CCWWGG	3 cut(s)	220, 1521, 1577
Eco147I	AGGCCT	1 cut(s)	616
Eco24I	GRGCYC	2 cut(s)	824, 1577
Eco47I	GGWCC	5 cut(s)	64, 459, 970, 1235, 1588
Eco53kI	GAGCTC	1 cut(s)	822
Eco57I	CTGAAG	5 cut(s)	607, 1266, 1700, 1739, 2012
Eco91I	GGTNACC	1 cut(s)	695
EcoICRI	GAGCTC	1 cut(s)	822
EcoO109I	RGGNCCY	2 cut(s)	1574, 1588
EcoO65I	GGTNACC	1 cut(s)	695
EcoRII	CCWGG	3 cut(s)	832, 1246, 1538
EcoT14I	CCWWGG	3 cut(s)	220, 1521, 1577
EcoT22I	ATGCAT	1 cut(s)	1159
EcoT38I	GRGCYC	2 cut(s)	824, 1577
ErhI	CCWWGG	3 cut(s)	220, 1521, 1577
FaeI	CATG	6 cut(s)	155, 667, 680, 1003, 1315, 1756
FaqI	GGGAC	3 cut(s)	77, 1556, 1601
FatI	CATG	6 cut(s)	151, 663, 676, 999, 1311, 1752
FauI	CCCGC	1 cut(s)	1578
FauNDI	CATATG	1 cut(s)	1045
FokI	GGATG	5 cut(s)	704, 1062, 1277, 1294, 1516
FriOI	GRGCYC	2 cut(s)	824, 1577
FspBI	CTAG	8 cut(s)	231, 270, 566, 843, 963, 1578, 1658, 1794
GlaI	GCGC	1 cut(s)	1888
GsaI	CCCAGC	2 cut(s)	334, 1503
GsuI	CTGGAG	1 cut(s)	1269
HaeIII	GGCC	5 cut(s)	258, 516, 616, 1349, 1575
HapII	CCGG	5 cut(s)	43, 265, 918, 1346, 1828
HhaI	GCGC	1 cut(s)	1889
Hin1II	CATG	6 cut(s)	155, 667, 680, 1003, 1315, 1756
Hin6I	GCGC	1 cut(s)	1887
HinP1I	GCGC	1 cut(s)	1887
HincII	GTYRAC	1 cut(s)	883
HindII	GTYRAC	1 cut(s)	883
HindIII	AAGCTT	1 cut(s)	950
HinfI	GANTC	5 cut(s)	148, 278, 362, 1130, 1895
HpaI	GTTAAC	1 cut(s)	883
HpaII	CCGG	5 cut(s)	43, 265, 918, 1346, 1828
HphI	GGTGA	4 cut(s)	134, 707, 735, 2008
Hpy166II	GTNNAC	4 cut(s)	743, 848, 883, 1614
Hpy188I	TCNGA	7 cut(s)	202, 250, 283, 804, 856, 1129, 1477
Hpy8I	GTNNAC	4 cut(s)	743, 848, 883, 1614
HpyAV	CCTTC	5 cut(s)	267, 540, 1248, 1329, 1627
HpyCH4III	ACNGT	6 cut(s)	7, 472, 545, 852, 1040, 1301
HpyCH4IV	ACGT	3 cut(s)	417, 1260, 1736
HpyF10VI	GCNNNNNNNGC	8 cut(s)	428, 1274, 1400, 1591, 1600, 1794, 1820, 1898
HpySE526I	ACGT	3 cut(s)	417, 1260, 1736
Hsp92II	CATG	6 cut(s)	155, 667, 680, 1003, 1315, 1756
HspAI	GCGC	1 cut(s)	1887
Kpn2I	TCCGGA	1 cut(s)	1827
KpnI	GGTACC	1 cut(s)	1538
KspAI	GTTAAC	1 cut(s)	883
Kzo9I	GATC	5 cut(s)	49, 316, 526, 654, 2050
LmnI	GCTCC	1 cut(s)	538
Lsp1109I	GCAGC	9 cut(s)	1264, 1388, 1390, 1590, 1633, 1837, 1861, 1888, 2010
LweI	GCATC	5 cut(s)	292, 625, 1166, 1255, 1494
MaeI	CTAG	8 cut(s)	231, 270, 566, 843, 963, 1578, 1658, 1794
MaeII	ACGT	3 cut(s)	417, 1260, 1736
MalI	GATC	5 cut(s)	51, 318, 528, 656, 2052
MbiI	CCGCTC	1 cut(s)	1139
MboI	GATC	5 cut(s)	49, 316, 526, 654, 2050
MflI	RGATCY	1 cut(s)	2050
MhlI	GDGCHC	5 cut(s)	543, 824, 914, 962, 1577
MlsI	TGGCCA	1 cut(s)	516
MluNI	TGGCCA	1 cut(s)	516
MlyI	GAGTC	3 cut(s)	356, 1124, 1904
MmeI	TCCRAC	1 cut(s)	1719
Mox20I	TGGCCA	1 cut(s)	516
Mph1103I	ATGCAT	1 cut(s)	1159
MroI	TCCGGA	1 cut(s)	1827
MroXI	GAANNNNTTC	1 cut(s)	294
MscI	TGGCCA	1 cut(s)	516
MslI	CAYNNNNRTG	3 cut(s)	201, 681, 1048
Msp20I	TGGCCA	1 cut(s)	516
MspA1I	CMGCKG	4 cut(s)	122, 1403, 1603, 2023
MspI	CCGG	5 cut(s)	43, 265, 918, 1346, 1828
MspR9I	CCNGG	4 cut(s)	44, 834, 1248, 1540
Mva1269I	GAATGC	4 cut(s)	811, 1159, 1279, 1852
MvaI	CCWGG	3 cut(s)	834, 1248, 1540
MvnI	CGCG	3 cut(s)	606, 1887, 1889
MwoI	GCNNNNNNNGC	8 cut(s)	428, 1274, 1400, 1591, 1600, 1794, 1820, 1898
NciI	CCSGG	1 cut(s)	44
NdeI	CATATG	1 cut(s)	1045
NdeII	GATC	5 cut(s)	49, 316, 526, 654, 2050
NheI	GCTAGC	1 cut(s)	1793
NlaIII	CATG	6 cut(s)	155, 667, 680, 1003, 1315, 1756
NlaIV	GGNNCC	7 cut(s)	65, 460, 1211, 1350, 1536, 1575, 1589
NmeAIII	GCCGAG	1 cut(s)	843
NmuCI	GTSAC	6 cut(s)	140, 170, 659, 695, 1014, 1996
NruI	TCGCGA	1 cut(s)	606
NsiI	ATGCAT	1 cut(s)	1159
NspI	RCATGY	1 cut(s)	1003
PaqCI	CACCTGC	1 cut(s)	1399
PasI	CCCWGGG	1 cut(s)	1539
PceI	AGGCCT	1 cut(s)	616
PctI	GAATGC	4 cut(s)	811, 1159, 1279, 1852
PdmI	GAANNNNTTC	1 cut(s)	294
PfeI	GAWTC	2 cut(s)	148, 278
PleI	GAGTC	3 cut(s)	356, 1124, 1903
PpsI	GAGTC	3 cut(s)	356, 1124, 1903
PpuMI	RGGWCCY	1 cut(s)	1588
PshAI	GACNNNNGTC	1 cut(s)	1012
Psp124BI	GAGCTC	1 cut(s)	824
Psp1406I	AACGTT	1 cut(s)	1736
Psp5II	RGGWCCY	1 cut(s)	1588
Psp6I	CCWGG	3 cut(s)	832, 1246, 1538
PspEI	GGTNACC	1 cut(s)	695
PspFI	CCCAGC	2 cut(s)	330, 1499
PspGI	CCWGG	3 cut(s)	832, 1246, 1538
PspN4I	GGNNCC	7 cut(s)	65, 460, 1211, 1350, 1536, 1575, 1589
PspOMI	GGGCCC	1 cut(s)	1573
PspPI	GGNCC	9 cut(s)	64, 257, 459, 970, 1235, 1348, 1573, 1574, 1588
PspPPI	RGGWCCY	1 cut(s)	1588
PstNI	CAGNNNCTG	4 cut(s)	168, 1406, 1460, 1898
PsuI	RGATCY	1 cut(s)	2050
PvuII	CAGCTG	3 cut(s)	1403, 1603, 2023
RruI	TCGCGA	1 cut(s)	606
RsaI	GTAC	4 cut(s)	575, 985, 1042, 1536
RsaNI	GTAC	4 cut(s)	574, 984, 1041, 1535
RseI	CAYNNNNRTG	3 cut(s)	201, 681, 1048
SacI	GAGCTC	1 cut(s)	824
Sau3AI	GATC	5 cut(s)	49, 316, 526, 654, 2050
Sau96I	GGNCC	9 cut(s)	64, 257, 459, 970, 1235, 1348, 1573, 1574, 1588
ScaI	AGTACT	1 cut(s)	985
SchI	GAGTC	3 cut(s)	356, 1124, 1904
ScrFI	CCNGG	4 cut(s)	44, 834, 1248, 1540
SduI	GDGCHC	5 cut(s)	543, 824, 914, 962, 1577
SfaNI	GCATC	5 cut(s)	292, 625, 1166, 1255, 1494
SfcI	CTRYAG	1 cut(s)	939
SinI	GGWCC	5 cut(s)	64, 459, 970, 1235, 1588
SmiMI	CAYNNNNRTG	3 cut(s)	201, 681, 1048
SmlI	CTYRAG	2 cut(s)	1835, 2054
SmoI	CTYRAG	2 cut(s)	1835, 2054
SseBI	AGGCCT	1 cut(s)	616
SsiI	CCGC	9 cut(s)	122, 439, 584, 1092, 1137, 1380, 1585, 1797, 1889
SspMI	CTAG	8 cut(s)	231, 270, 566, 843, 963, 1578, 1658, 1794
SstI	GAGCTC	1 cut(s)	824
StuI	AGGCCT	1 cut(s)	616
StyD4I	CCNGG	4 cut(s)	42, 832, 1246, 1538
StyI	CCWWGG	3 cut(s)	220, 1521, 1577
TaaI	ACNGT	6 cut(s)	7, 472, 545, 852, 1040, 1301
TaiI	ACGT	3 cut(s)	420, 1263, 1739
TaqI	TCGA	1 cut(s)	1006
TatI	WGTACW	2 cut(s)	573, 983
TauI	GCSGC	2 cut(s)	1382, 1892
TfiI	GAWTC	2 cut(s)	148, 278
TscAI	CASTG	9 cut(s)	169, 475, 548, 634, 724, 1306, 1434, 1461, 1535
TseFI	GTSAC	6 cut(s)	140, 170, 659, 695, 1014, 1996
TseI	GCWGC	9 cut(s)	1277, 1376, 1403, 1603, 1646, 1850, 1874, 1901, 2023
Tsp45I	GTSAC	6 cut(s)	140, 170, 659, 695, 1014, 1996
TspDTI	ATGAA	6 cut(s)	234, 365, 680, 1010, 1310, 1769
TspRI	CASTG	9 cut(s)	169, 475, 548, 634, 724, 1306, 1434, 1461, 1535
VpaK11BI	GGWCC	5 cut(s)	64, 459, 970, 1235, 1588
XapI	RAATTY	6 cut(s)	113, 128, 874, 1486, 1816, 1949
XceI	RCATGY	1 cut(s)	1003
XmaJI	CCTAGG	1 cut(s)	1577
XmnI	GAANNNNTTC	1 cut(s)	294
XspI	CTAG	8 cut(s)	231, 270, 566, 843, 963, 1578, 1658, 1794
ZrmI	AGTACT	1 cut(s)	985
Zsp2I	ATGCAT	1 cut(s)	1159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.