Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0010818

Physical Location & Seq

Genomic Coordinates Reverse (-)

422301 .. 429461

Gene Structure 7161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010304

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGTCCAAATAGACTTTAGATATAAACCAAGGGACTATTTAGCAAAAACCGACAATAATCATAACAACTTGCTCTCCGCAGAACAGAACAATCTCGGCGATCTTGATCCAGACGGCACCGTTTTGGCTCTCTCTGGCTCACAATCTTCATCCACCTCTGCTCAATTCGCCGGAAAAAGTTCAATCGGTGTGGGTCTAGGGTTTCAGATCTCGCACTCTTCCAGGTGGGTTTATGTTATTGTGGAGGTTCAATTTGAGAAGCTAAGGTTGGGAACAATGCATGCCAAGGGGACACAATCGTCTTTTCGGGATCGGACGCAGGAGTTCCACAGTGTAGCAGAGAGGCTAAAGAAGTCATTCTCGTCGGCGCCGGGGCCGGGGCCGGGGCCGGGGCCGGGGCCGGGGCCGTCTCAGAATGGCCCGAGTAGTGGATCGAAATTCCAGGAACAACAATCGGCGGTGGCGACTCACTCCGAGTTTAATAAGAGGGCATCCAAAATTGGATTGGGGATACACGCCACGTCGCAGAAGCTTGGAAAGCTGACAAAATTGGCGAAGAGGACTTCTGTTTTTGATGATCCTACAAGGGAAATTCAGGAGCTGACAGCAGTTATCAAGCAGGATATTACTGCACTCAACTCTGCAGTGGTAGACCTTCAGCTCCTATCTCATTCCAGAAATGAAAGTGGGAATATTTCTAGTGACACGACTAGTCATTCAACCACAGTTGTTGACGACCTGAAAAATCGGCTTATGAGCACCACAAAAGAGTTTAAAGAAGTCCTCACCATGCGAACTGAGAATTTGAAAGTTCATGAGAATAGAAGACAATTGTTTTCGTCTAGTGCCTCCAAGGAATCCACAAATCCTTTTGTTCGGCAGCGCCCACTGGCTGCTAGGTCAACTGCTAGTTCTTCAAGTGCCTCTCCTCCTCCATGGGCTAATGGATCAGCATCGTCCTCGCAGTTGTTCCCAAAGAAGGAGATAGATGGGGAGAGTCAACCATTGCTCCAGCAACAGCATCAGCAGCAACAGCAACAACAGGAGATGGTTCCATATCAAGACAGTTTCATGCAGAGTAGAGCTGAAGCTTTGCAAAATGTTGAGTCCACCATTCATGAGCTGAGTAATATTTTCAACCAGCTGGCGACATTGGTTTCTGAGCAAGGGGAAGTTGCCATCAGGATTGATGAGAACATGGAAGACACATTGGCAAATGTAGAGGGTGCACAAGGGCAACTGCTCAAGTATATGAATAGCATATCATCAAATAGGTCTCCGTTTGCGCGAGTCGGAGCCGATTCGATTTTTGCAGAGAGTCGACGACGACGACGACGTGAATTTTGGGCATCGCTAAATCTGAGTGTTGGAAGGAGGAACAAACAGATGGTAGGCGGTGGAAACAGGAGAGACGAGGGCTCGCTCGTCATCAAGAACACCAACGTTTTCGCGGCGCTCGAGACTCTGAGGAAGAAGAAGAAGTCCGATAAGAAGAGCAGAGGGACCTCCAAGGACCACTCGGGGCAGCCCAAGGCGCCCGAGCCACAGGTGTTCTGGGCGCCTGCTCCCTTGAACGCCAAGTCGTGGGCCGATGTTGATGATGAAGATGATGATGACTATTATGCCACCACGGCCCCGATTCAGCCGGTTTGGGGATCCTCTCAGCCTCAGCCGAGTAAGCACAAGGCTGCCAATGTAGAGGAAAGTGAGAGTGAAGAAGATATTCTTGATGAAGGTGATGAAGATGAGGAAGAGCATGATCATGAACCAGAGGCTCCAGTTCAGCCTGAGCCAGTGGCGAAGAAGCCTGCTGAGGTTCCTGCCCCACCTAAGGAGGCAGAAAAGCAACTTTCAAAGAAGGAGAGAAAGAAAAAGGAACTTGCAGAACTTGAAGCTCTTCTAGCTGATTTTGGAGTTACCCAGAAGGAGAGTGACAGTCAAGATGAATCACGTGGTGTTGCCCAAGACAAGGACAATGTGCCCAATGGAGATGCAGAAAAGAAGGAAAATCATCCCGCAGAGTCCAAAAGCTCCAAGAAGAAGAAAAAGAAAGATAAAGCTTCTAAGGATGCAAAAGAATCACAGGATCAACCAAACAACTCAGGGGTCACTAATGGACCAAGTGAAGTTGCAGGAACTGAACAGACGGAGGAGGACACATCAACTATTGATGTGAAAGAGAGACTAAAGAAGGTGGCAACTGCCAAGAAGAAGAAATCTACCAAAGAGTTGGATGCGGCTGCAAAAGCTGCTGCTCAAGAGGCTGCTGCCAGGAGAGCAAAACTTGCTGCAGCCAAGAAGAAAGAGAAGAACCATTATAACCAGCAGCCTCTGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000149 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006888 GO:0006906 GO:0006996 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0031090 GO:0031201 GO:0031224 GO:0031984 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048278 GO:0048284 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0061024 GO:0061025 GO:0071840 GO:0090174 GO:0098588 GO:0098791 GO:0098796 GO:0140056

KEGG Pathways

Metabolic & Signaling

ko04130 map04130

Pfam Domains

Protein Families

SNARE Syntaxin Syntaxin-5_N

Protein Analysis

780

Amino Acids

85.65

Weight (kDa)

7.76

Isoelectric Point (pI)

55.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syntaxin-5_N	PF11416	100 - 118	2.6e-06	Syntaxin-5 N-terminal, Sly1p-binding domain
SNARE	PF05739	392 - 426	1.4e-07	SNARE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24350 AT3G24350
fragaria_vesca	FvH4_2g30200
malus_domestica	MD15G1114700.v1.1 MD15G1114800.v1.1 MD15G1190200.v1.1
prunus_persica	Prupe.1G466200_v2.0.a1 Prupe.1G466200_v2.0.a1 Prupe.7G226900_v2.0.a1
pyrus_communis	pycom15g10340
rosa_chinensis	RchiOBHm_Chr6g0312681
rosa_laevigata	RLG00000010304
rosa_multiflora	Rmu_sc0002859.1_g000001 Rmu_ssc0000412.1_g000010
rosa_roxburghii	Rroxscaffold_7G00156570
rosa_samantha	Rh6AG515700 Rh6BG527200 Rh6CG532100 Rh6DG518100
rosa_wichuraiana	Rw6G044810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2319
AasI	GACNNNNNNGTC	1 cut(s)	298
AccB1I	GGYRCC	4 cut(s)	116, 367, 1534, 1558
AccB7I	CCANNNNNTGG	1 cut(s)	1584
AccI	GTMKAC	2 cut(s)	651, 1321
AccII	CGCG	2 cut(s)	1288, 1451
AciI	CCGC	7 cut(s)	78, 458, 1395, 1451, 2016, 2237, 2335
AclI	AACGTT	1 cut(s)	1443
AclWI	GGATC	8 cut(s)	101, 318, 439, 572, 955, 1650, 1663, 2094
AcsI	RAATTY	4 cut(s)	437, 591, 802, 1340
AcuI	CTGAAG	2 cut(s)	641, 1107
AcvI	CACGTG	1 cut(s)	1952
AcyI	GRCGYC	3 cut(s)	368, 1535, 1559
AdeI	CACNNNGTG	1 cut(s)	1955
AgsI	TTSAA	9 cut(s)	183, 251, 720, 808, 918, 1138, 1573, 1854, 1892
AhlI	ACTAGT	1 cut(s)	710
AjiI	CACGTC	2 cut(s)	522, 1337
AjnI	CCWGG	3 cut(s)	221, 441, 2270
AjuI	GAANNNNNNNTTGG	2 cut(s)	251, 283
Alw21I	GWGCWC	2 cut(s)	761, 1231
Alw26I	GTCTC	5 cut(s)	414, 1281, 1404, 1454, 2176
Alw44I	GTGCAC	1 cut(s)	1227
AlwI	GGATC	8 cut(s)	101, 318, 439, 572, 955, 1650, 1663, 2094
AlwNI	CAGNNNCTG	3 cut(s)	601, 2138, 2332
Ama87I	CYCGRG	4 cut(s)	421, 1457, 1519, 1538
AoxI	GGCC	9 cut(s)	374, 380, 386, 392, 398, 404, 418, 1587, 1632
ApaLI	GTGCAC	1 cut(s)	1227
ApoI	RAATTY	4 cut(s)	437, 591, 802, 1340
ArsI	GACNNNNNNTTYG	2 cut(s)	1326, 1358
Asp700I	GAANNNNTTC	4 cut(s)	178, 356, 1722, 1896
AspLEI	GCGC	6 cut(s)	370, 885, 1288, 1456, 1537, 1561
AsuC2I	CCSGG	6 cut(s)	372, 378, 384, 390, 396, 402
AsuHPI	GGTGA	2 cut(s)	778, 1748
AvaI	CYCGRG	4 cut(s)	421, 1457, 1519, 1538
AvaII	GGWCC	4 cut(s)	4, 1503, 1513, 2117
AxyI	CCTNAGG	1 cut(s)	1830
BaeGI	GKGCMC	2 cut(s)	1231, 1983
BamHI	GGATCC	1 cut(s)	1655
BanI	GGYRCC	4 cut(s)	116, 367, 1534, 1558
BanII	GRGCYC	1 cut(s)	1421
BbrPI	CACGTG	1 cut(s)	1952
BbsI	GAAGAC	2 cut(s)	832, 1209
Bbv12I	GWGCWC	2 cut(s)	761, 1231
BbvCI	CCTCAGC	2 cut(s)	1668, 1812
BccI	CCATC	4 cut(s)	983, 1042, 1187, 1381
BceAI	ACGGC	3 cut(s)	130, 391, 1647
BcgI	CGANNNNNNTGC	2 cut(s)	942, 976
BciT130I	CCWGG	3 cut(s)	223, 443, 2272
BciVI	GTATCC	1 cut(s)	504
BclI	TGATCA	1 cut(s)	1759
BcnI	CCSGG	6 cut(s)	372, 378, 384, 390, 396, 402
BcoDI	GTCTC	5 cut(s)	414, 1281, 1404, 1454, 2176
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	7 cut(s)	197, 699, 711, 843, 897, 909, 1901
BfmI	CTRYAG	2 cut(s)	642, 2289
BfoI	RGCGCY	5 cut(s)	371, 886, 1457, 1538, 1562
BfuI	GTATCC	1 cut(s)	504
BglI	GCCNNNNNGGC	1 cut(s)	1631
BglII	AGATCT	1 cut(s)	207
Bme1390I	CCNGG	9 cut(s)	223, 372, 378, 384, 390, 396, 402, 443, 2272
Bme18I	GGWCC	4 cut(s)	4, 1503, 1513, 2117
BmeT110I	CYCGRG	4 cut(s)	421, 1457, 1519, 1538
BmgBI	CACGTC	2 cut(s)	522, 1337
BmrFI	CCNGG	9 cut(s)	223, 372, 378, 384, 390, 396, 402, 443, 2272
BmsI	GCATC	7 cut(s)	500, 962, 1030, 1358, 1981, 2059, 2224
BpiI	GAAGAC	2 cut(s)	832, 1209
BpmI	CTGGAG	2 cut(s)	995, 1761
Bpu10I	CCTNAGC	4 cut(s)	263, 1668, 1788, 1812
BpuEI	CTTGAG	2 cut(s)	1229, 2241
BpuMI	CCSGG	6 cut(s)	372, 378, 384, 390, 396, 402
BsaAI	YACGTR	1 cut(s)	1952
BsaBI	GATNNNNATC	2 cut(s)	105, 952
BsaHI	GRCGYC	3 cut(s)	368, 1535, 1559
BsaI	GGTCTC	1 cut(s)	1281
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 993, 1023
Bse118I	RCCGGY	1 cut(s)	1645
Bse1I	ACTGG	3 cut(s)	894, 1778, 1793
Bse21I	CCTNAGG	1 cut(s)	1830
Bse3DI	GCAATG	1 cut(s)	1004
Bse8I	GATNNNNATC	2 cut(s)	105, 952
BseBI	CCWGG	3 cut(s)	223, 443, 2272
BseGI	GGATG	5 cut(s)	149, 491, 2011, 2074, 2239
BseJI	GATNNNNATC	2 cut(s)	105, 952
BseMI	GCAATG	1 cut(s)	1004
BseNI	ACTGG	3 cut(s)	894, 1778, 1793
BseRI	GAGGAG	3 cut(s)	918, 921, 2165
BseSI	GKGCMC	2 cut(s)	1231, 1983
BsgI	GTGCAG	1 cut(s)	615
Bsh1236I	CGCG	2 cut(s)	1288, 1451
BshFI	GGCC	9 cut(s)	376, 382, 388, 394, 400, 406, 420, 1589, 1634
BshNI	GGYRCC	4 cut(s)	116, 367, 1534, 1558
BsiHKAI	GWGCWC	2 cut(s)	761, 1231
BsiHKCI	CYCGRG	4 cut(s)	421, 1457, 1519, 1538
BsiSI	CCGG	8 cut(s)	171, 371, 377, 383, 389, 395, 401, 1646
BslFI	GGGAC	3 cut(s)	47, 304, 1516
BsmAI	GTCTC	5 cut(s)	414, 1281, 1404, 1454, 2176
BsmBI	CGTCTC	2 cut(s)	414, 1404
BsmFI	GGGAC	3 cut(s)	47, 304, 1516
BsnI	GGCC	9 cut(s)	376, 382, 388, 394, 400, 406, 420, 1589, 1634
Bso31I	GGTCTC	1 cut(s)	1281
BsoBI	CYCGRG	4 cut(s)	421, 1457, 1519, 1538
Bsp1286I	GDGCHC	4 cut(s)	761, 1231, 1421, 1983
Bsp19I	CCATGG	1 cut(s)	935
BspACI	CCGC	7 cut(s)	78, 458, 1395, 1451, 2016, 2237, 2335
BspANI	GGCC	9 cut(s)	376, 382, 388, 394, 400, 406, 420, 1589, 1634
BspFNI	CGCG	2 cut(s)	1288, 1451
BspHI	TCATGA	3 cut(s)	814, 1117, 1762
BspMAI	CTGCAG	2 cut(s)	646, 2293
BspPI	GGATC	8 cut(s)	101, 318, 439, 572, 955, 1650, 1663, 2094
BspQI	GCTCTTC	3 cut(s)	1487, 1746, 1902
BspT107I	GGYRCC	4 cut(s)	116, 367, 1534, 1558
BspTNI	GGTCTC	1 cut(s)	1281
BsrDI	GCAATG	1 cut(s)	1004
BsrFI	RCCGGY	1 cut(s)	1645
BsrI	ACTGG	3 cut(s)	894, 1778, 1793
BssAI	RCCGGY	1 cut(s)	1645
BssNI	GRCGYC	3 cut(s)	368, 1535, 1559
BssT1I	CCWWGG	6 cut(s)	29, 285, 852, 935, 1509, 1530
Bst2UI	CCWGG	3 cut(s)	223, 443, 2272
Bst4CI	ACNGT	5 cut(s)	121, 332, 727, 1067, 1937
Bst6I	CTCTTC	5 cut(s)	223, 551, 1487, 1746, 1902
BstACI	GRCGYC	3 cut(s)	368, 1535, 1559
BstAPI	GCANNNNNTGC	3 cut(s)	2249, 2285, 2332
BstBAI	YACGTR	1 cut(s)	1952
BstC8I	GCNNGC	5 cut(s)	282, 1146, 1421, 1563, 1809
BstDSI	CCRYGG	2 cut(s)	935, 1629
BstF5I	GGATG	5 cut(s)	149, 491, 2011, 2074, 2239
BstFNI	CGCG	2 cut(s)	1288, 1451
BstH2I	RGCGCY	5 cut(s)	371, 886, 1457, 1538, 1562
BstHHI	GCGC	6 cut(s)	370, 885, 1288, 1456, 1537, 1561
BstMAI	GTCTC	5 cut(s)	414, 1281, 1404, 1454, 2176
BstNI	CCWGG	3 cut(s)	223, 443, 2272
BstNSI	RCATGY	1 cut(s)	284
BstSCI	CCNGG	9 cut(s)	221, 370, 376, 382, 388, 394, 400, 441, 2270
BstSFI	CTRYAG	2 cut(s)	642, 2289
BstSLI	GKGCMC	2 cut(s)	1231, 1983
BstUI	CGCG	2 cut(s)	1288, 1451
BstV2I	GAAGAC	2 cut(s)	832, 1209
BstX2I	RGATCY	2 cut(s)	207, 1655
BstXI	CCANNNNNNTGG	1 cut(s)	2230
BstYI	RGATCY	2 cut(s)	207, 1655
Bsu36I	CCTNAGG	1 cut(s)	1830
BsuI	GTATCC	1 cut(s)	504
BsuRI	GGCC	9 cut(s)	376, 382, 388, 394, 400, 406, 420, 1589, 1634
BtgI	CCRYGG	2 cut(s)	935, 1629
BtgZI	GCGATG	1 cut(s)	1335
BtrI	CACGTC	2 cut(s)	522, 1337
BtsCI	GGATG	5 cut(s)	149, 491, 2011, 2074, 2239
BtsI	GCAGTG	1 cut(s)	651
BtsIMutI	CAGTG	4 cut(s)	337, 651, 887, 1800
Cac8I	GCNNGC	5 cut(s)	282, 1146, 1421, 1563, 1809
CaiI	CAGNNNCTG	3 cut(s)	601, 2138, 2332
CciI	TCATGA	3 cut(s)	814, 1117, 1762
CfoI	GCGC	6 cut(s)	370, 885, 1288, 1456, 1537, 1561
Cfr10I	RCCGGY	1 cut(s)	1645
CseI	GACGC	1 cut(s)	325
CspCI	CAANNNNNGTGG	4 cut(s)	171, 206, 712, 747
CviAII	CATG	9 cut(s)	281, 790, 815, 936, 1072, 1118, 1198, 1757, 1763
DinI	GGCGCC	3 cut(s)	369, 1536, 1560
DraI	TTTAAA	1 cut(s)	775
DraIII	CACNNNGTG	1 cut(s)	1955
DrdI	GACNNNNNNGTC	1 cut(s)	298
DseDI	GACNNNNNNGTC	1 cut(s)	298
Eam1104I	CTCTTC	5 cut(s)	223, 551, 1487, 1746, 1902
EarI	CTCTTC	5 cut(s)	223, 551, 1487, 1746, 1902
Eco130I	CCWWGG	6 cut(s)	29, 285, 852, 935, 1509, 1530
Eco24I	GRGCYC	1 cut(s)	1421
Eco31I	GGTCTC	1 cut(s)	1281
Eco47I	GGWCC	4 cut(s)	4, 1503, 1513, 2117
Eco57I	CTGAAG	2 cut(s)	641, 1107
Eco72I	CACGTG	1 cut(s)	1952
Eco81I	CCTNAGG	1 cut(s)	1830
Eco88I	CYCGRG	4 cut(s)	421, 1457, 1519, 1538
EcoO109I	RGGNCCY	1 cut(s)	1503
EcoRII	CCWGG	3 cut(s)	221, 441, 2270
EcoT14I	CCWWGG	6 cut(s)	29, 285, 852, 935, 1509, 1530
EcoT22I	ATGCAT	1 cut(s)	282
EcoT38I	GRGCYC	1 cut(s)	1421
EgeI	GGCGCC	3 cut(s)	369, 1536, 1560
EheI	GGCGCC	3 cut(s)	369, 1536, 1560
ErhI	CCWWGG	6 cut(s)	29, 285, 852, 935, 1509, 1530
Esp3I	CGTCTC	2 cut(s)	414, 1404
FaeI	CATG	9 cut(s)	284, 793, 818, 939, 1075, 1121, 1201, 1760, 1766
FalI	AAGNNNNNCTT	2 cut(s)	1710, 1742
FaqI	GGGAC	3 cut(s)	47, 304, 1516
FatI	CATG	9 cut(s)	280, 789, 814, 935, 1071, 1117, 1197, 1756, 1762
FauI	CCCGC	1 cut(s)	2023
FbaI	TGATCA	1 cut(s)	1759
FblI	GTMKAC	2 cut(s)	651, 1321
FokI	GGATG	5 cut(s)	136, 478, 1998, 2081, 2246
FriOI	GRGCYC	1 cut(s)	1421
FspBI	CTAG	7 cut(s)	197, 699, 711, 843, 897, 909, 1901
GlaI	GCGC	6 cut(s)	369, 884, 1287, 1455, 1536, 1560
GsuI	CTGGAG	2 cut(s)	995, 1761
HaeII	RGCGCY	5 cut(s)	371, 886, 1457, 1538, 1562
HaeIII	GGCC	9 cut(s)	376, 382, 388, 394, 400, 406, 420, 1589, 1634
HapII	CCGG	8 cut(s)	171, 371, 377, 383, 389, 395, 401, 1646
HgaI	GACGC	1 cut(s)	325
HhaI	GCGC	6 cut(s)	370, 885, 1288, 1456, 1537, 1561
Hin1I	GRCGYC	3 cut(s)	368, 1535, 1559
Hin1II	CATG	9 cut(s)	284, 793, 818, 939, 1075, 1121, 1201, 1760, 1766
Hin6I	GCGC	6 cut(s)	368, 883, 1286, 1454, 1535, 1559
HinP1I	GCGC	6 cut(s)	368, 883, 1286, 1454, 1535, 1559
HincII	GTYRAC	4 cut(s)	733, 903, 1001, 1322
HindII	GTYRAC	4 cut(s)	733, 903, 1001, 1322
HindIII	AAGCTT	3 cut(s)	530, 1089, 2058
HpaII	CCGG	8 cut(s)	171, 371, 377, 383, 389, 395, 401, 1646
HphI	GGTGA	2 cut(s)	778, 1748
Hpy166II	GTNNAC	7 cut(s)	652, 733, 903, 1001, 1110, 1229, 1322
Hpy188I	TCNGA	9 cut(s)	207, 315, 414, 475, 1162, 1295, 1362, 1467, 1486
Hpy8I	GTNNAC	7 cut(s)	652, 733, 903, 1001, 1110, 1229, 1322
Hpy99I	CGWCG	7 cut(s)	367, 526, 1326, 1329, 1332, 1335, 1338
HpyAV	CCTTC	8 cut(s)	665, 973, 1365, 1727, 1852, 1918, 1996, 2185
HpyCH4III	ACNGT	5 cut(s)	121, 332, 727, 1067, 1937
HpyCH4IV	ACGT	4 cut(s)	521, 1336, 1443, 1951
HpySE526I	ACGT	4 cut(s)	521, 1336, 1443, 1951
Hsp92I	GRCGYC	3 cut(s)	368, 1535, 1559
Hsp92II	CATG	9 cut(s)	284, 793, 818, 939, 1075, 1121, 1201, 1760, 1766
HspAI	GCGC	6 cut(s)	368, 883, 1286, 1454, 1535, 1559
KasI	GGCGCC	3 cut(s)	367, 1534, 1558
Ksp22I	TGATCA	1 cut(s)	1759
LguI	GCTCTTC	3 cut(s)	1487, 1746, 1902
LmnI	GCTCC	7 cut(s)	598, 666, 1014, 1295, 1570, 1780, 2036
LweI	GCATC	7 cut(s)	500, 962, 1030, 1358, 1981, 2059, 2224
MaeI	CTAG	7 cut(s)	197, 699, 711, 843, 897, 909, 1901
MaeII	ACGT	4 cut(s)	521, 1336, 1443, 1951
MaeIII	GTNAC	4 cut(s)	701, 1915, 1931, 2107
MfeI	CAATTG	1 cut(s)	830
MflI	RGATCY	2 cut(s)	207, 1655
MhlI	GDGCHC	4 cut(s)	761, 1231, 1421, 1983
MluCI	AATT	9 cut(s)	164, 251, 437, 498, 548, 591, 802, 830, 1340
Mly113I	GGCGCC	3 cut(s)	368, 1535, 1559
MlyI	GAGTC	7 cut(s)	460, 1006, 1115, 1299, 1327, 1456, 2030
MmeI	TCCRAC	3 cut(s)	1273, 1348, 2211
Mph1103I	ATGCAT	1 cut(s)	282
MroXI	GAANNNNTTC	4 cut(s)	178, 356, 1722, 1896
MseI	TTAA	2 cut(s)	480, 774
MslI	CAYNNNNRTG	1 cut(s)	1761
MspA1I	CMGCKG	1 cut(s)	1144
MspI	CCGG	8 cut(s)	171, 371, 377, 383, 389, 395, 401, 1646
MspR9I	CCNGG	9 cut(s)	223, 372, 378, 384, 390, 396, 402, 443, 2272
MunI	CAATTG	1 cut(s)	830
MvaI	CCWGG	3 cut(s)	223, 443, 2272
MvnI	CGCG	2 cut(s)	1288, 1451
NarI	GGCGCC	3 cut(s)	368, 1535, 1559
NciI	CCSGG	6 cut(s)	372, 378, 384, 390, 396, 402
NcoI	CCATGG	1 cut(s)	935
NlaIII	CATG	9 cut(s)	284, 793, 818, 939, 1075, 1121, 1201, 1760, 1766
NmeAIII	GCCGAG	2 cut(s)	75, 1698
NmuCI	GTSAC	3 cut(s)	701, 1931, 2107
NsiI	ATGCAT	1 cut(s)	282
NspI	RCATGY	1 cut(s)	284
PaeI	GCATGC	1 cut(s)	284
PaeR7I	CTCGAG	1 cut(s)	1457
PagI	TCATGA	3 cut(s)	814, 1117, 1762
PciSI	GCTCTTC	3 cut(s)	1487, 1746, 1902
PcsI	WCGNNNNNNNCGW	5 cut(s)	461, 1327, 1330, 1333, 1455
PdmI	GAANNNNTTC	4 cut(s)	178, 356, 1722, 1896
PfeI	GAWTC	5 cut(s)	857, 1301, 1639, 1946, 2078
PflMI	CCANNNNNTGG	1 cut(s)	1584
PfoI	TCCNGGA	1 cut(s)	441
PleI	GAGTC	7 cut(s)	460, 1005, 1114, 1298, 1326, 1456, 2029
PluTI	GGCGCC	3 cut(s)	371, 1538, 1562
PmaCI	CACGTG	1 cut(s)	1952
PmlI	CACGTG	1 cut(s)	1952
PpsI	GAGTC	7 cut(s)	460, 1005, 1114, 1298, 1326, 1456, 2029
Ppu21I	YACGTR	1 cut(s)	1952
PpuMI	RGGWCCY	1 cut(s)	1503
PsiI	TTATAA	1 cut(s)	2319
Psp1406I	AACGTT	1 cut(s)	1443
Psp5II	RGGWCCY	1 cut(s)	1503
Psp6I	CCWGG	3 cut(s)	221, 441, 2270
PspCI	CACGTG	1 cut(s)	1952
PspGI	CCWGG	3 cut(s)	221, 441, 2270
PspPPI	RGGWCCY	1 cut(s)	1503
PstI	CTGCAG	2 cut(s)	646, 2293
PstNI	CAGNNNCTG	3 cut(s)	601, 2138, 2332
PsuI	RGATCY	2 cut(s)	207, 1655
PvuII	CAGCTG	1 cut(s)	1144
RseI	CAYNNNNRTG	1 cut(s)	1761
SalI	GTCGAC	1 cut(s)	1320
SapI	GCTCTTC	3 cut(s)	1487, 1746, 1902
SaqAI	TTAA	2 cut(s)	480, 774
SchI	GAGTC	7 cut(s)	460, 1006, 1115, 1299, 1327, 1456, 2030
ScrFI	CCNGG	9 cut(s)	223, 372, 378, 384, 390, 396, 402, 443, 2272
SduI	GDGCHC	4 cut(s)	761, 1231, 1421, 1983
SfaNI	GCATC	7 cut(s)	500, 962, 1030, 1358, 1981, 2059, 2224
SfcI	CTRYAG	2 cut(s)	642, 2289
SfoI	GGCGCC	3 cut(s)	369, 1536, 1560
Sfr274I	CTCGAG	1 cut(s)	1457
SinI	GGWCC	4 cut(s)	4, 1503, 1513, 2117
SlaI	CTCGAG	1 cut(s)	1457
SmiMI	CAYNNNNRTG	1 cut(s)	1761
SmlI	CTYRAG	3 cut(s)	1244, 1457, 2256
SmoI	CTYRAG	3 cut(s)	1244, 1457, 2256
SpeI	ACTAGT	1 cut(s)	710
SphI	GCATGC	1 cut(s)	284
Sse9I	AATT	9 cut(s)	164, 251, 437, 498, 548, 591, 802, 830, 1340
SsiI	CCGC	7 cut(s)	78, 458, 1395, 1451, 2016, 2237, 2335
SspDI	GGCGCC	3 cut(s)	367, 1534, 1558
SspI	AATATT	2 cut(s)	694, 1132
SspMI	CTAG	7 cut(s)	197, 699, 711, 843, 897, 909, 1901
StyD4I	CCNGG	9 cut(s)	221, 370, 376, 382, 388, 394, 400, 441, 2270
StyI	CCWWGG	6 cut(s)	29, 285, 852, 935, 1509, 1530
TaaI	ACNGT	5 cut(s)	121, 332, 727, 1067, 1937
TaiI	ACGT	4 cut(s)	524, 1339, 1446, 1954
TaqI	TCGA	4 cut(s)	434, 1304, 1321, 1458
TasI	AATT	9 cut(s)	164, 251, 437, 498, 548, 591, 802, 830, 1340
TauI	GCSGC	2 cut(s)	1454, 2240
TfiI	GAWTC	5 cut(s)	857, 1301, 1639, 1946, 2078
Tru1I	TTAA	2 cut(s)	480, 774
Tru9I	TTAA	2 cut(s)	480, 774
TscAI	CASTG	4 cut(s)	337, 651, 894, 1800
TseFI	GTSAC	3 cut(s)	701, 1931, 2107
Tsp45I	GTSAC	3 cut(s)	701, 1931, 2107
TspGWI	ACGGA	2 cut(s)	1269, 2162
TspRI	CASTG	4 cut(s)	337, 651, 894, 1800
Van91I	CCANNNNNTGG	1 cut(s)	1584
VneI	GTGCAC	1 cut(s)	1227
VpaK11BI	GGWCC	4 cut(s)	4, 1503, 1513, 2117
XapI	RAATTY	4 cut(s)	437, 591, 802, 1340
XceI	RCATGY	1 cut(s)	284
XcmI	CCANNNNNNNNNTGG	2 cut(s)	502, 1551
XhoI	CTCGAG	1 cut(s)	1457
XmiI	GTMKAC	2 cut(s)	651, 1321
XmnI	GAANNNNTTC	4 cut(s)	178, 356, 1722, 1896
XspI	CTAG	7 cut(s)	197, 699, 711, 843, 897, 909, 1901
Zsp2I	ATGCAT	1 cut(s)	282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.