Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004909

Physical Location & Seq

Genomic Coordinates Forward (+)

11654519 .. 11658137

Gene Structure 3619 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011682

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGACGAATTCGGTGTTTTGACGGAGAGGTTTGGCCTGAAACCTCAAGGCAAATCGGCGCCGATGGCCGCATCCAGAAGAGCAACACCCACCAACAACCCCCAAACGACGTCGTATGCATCCTCCTCCAGATCTTCCGCCAATTCCAATTCCAATTCCGCCTACGCTTCTTTTCTCGACGATCAAACCGGCTTCTTCTCCCAATCGAGCTCTACCCAAAACACGGCCGGCTTCGGCGGATTCAACGATTACAACGACATCTTCGGCGGCGGAGTCACTAGGCCCGCACAGCAGCAACAATCCCAAGGCTCCGACTTTAATTTGGATTCCATGTTTTCGGGTACGAGTGCCAATACGTCGTCGTTTGACGACGGCTTTGGTGTGTTTGGGAACTCCGGTGGCTCGGTTAATAGTAATGTGAAGGATGATGACTTTTTCGGGTCGTTTTCTTCGGCTCCGGAACAGAGTGCAGCTCCGAGCAATGACCTGCTGGGTGATCTCGGTGGAGTAGCAAGGAAATTGCAGAGTACGAGCAATAGTAATAGAAATGGGAATAGGACCGGAACGCCGGCGAACAATGCAGCTGATTCTGATGATTTGTTACCTGGCTTTGGTGTTAGCAATGCTTCCTATAGTGGAACTTACACACAGGAAAGTCGTACTCAGCAATCAACTGTTAATTCAACTAAGTCAAACTTCAGTTCACCAATGGATGACCCTTTTGTGGTCTTAGAATCAGTTTCAAGTTCAACACCAGCAGATTCCTTAGATTATCTTTCAGAACTGGAACAATTCAGTAAGATGAGTAATTCTGGAGGCGCGAACCAGGGTGGTTCATCAAATAGTTCTACAAAACTGAAAGCGCCCCCAAAACCAGCTCAAGTTTCAAAGGAAAGGAGCTCTGATGTGTCTTCTATAGATGATCTTGAGAAATTTGCCAGTGCTGGGGTGCCAAATAGTGCTCCCAGAGTTCCTTCTCGTAACGAAGGGGTAGAATCCTCAGCCACCAGACATGGCAAATCAAGTGGAGATGATCTAGATTTCATGTTGAGCACAGGTTTTCGATCTAGCAGTGTACCGAAGTCAAGGGTTAAAAATGCGGACCCAATATTTGATGCACAGACGGACAACAGAGGAGGGCCTAGGCCCCAAAGGACATCTTCTAGGACCTCAGGCAGCATGAAGAAGTCCCCTTCTGCAAGTGGTATCTTTGATGACCTCTTTTCAATAGATGGAGCTTCCCCAATGGTTGCAGAATTTGAGGAAGTTGAAGGTGAAAGTGAAGAAAGACGAAAAGCCAGATTGGGACGGCACCAGAGAACAAAGGAACGCGCGTTGCAAGCAGTGGCAGATATGAACCAACGTGATTTGCGTACTCAGCAGGAGCAGGAAGAGAGGCGTAGAATTGCTGAGGCTATGGATGCTAAAATAAAGGGATGGGCTGCAGGGAAAGAAGGGAATATGCGTGCACTATTGTCTTCATTGCAATCCGTTCTTTGGCCTGACTCTGGATGGGAGCCAGTTTCACTCACAGATCTGATTACTTCTGGTTCAGTTAAAAAGGTTTACAGAAAGGCCACATTGTGTGTCCATCCAGATAAGGTTCAACAGAAAGGAGCTAGTCTTCAACAAAAATATACTGCAGAGAAGGTTTTTGATATTCTTAAGGAAGCTTGGACCAAGTTCAACAAGGAGGAACTTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

569

Amino Acids

60.83

Weight (kDa)

5.5

Isoelectric Point (pI)

51.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004909)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21660
fragaria_vesca	FvH4_2g27690 FvH4_2g27690 FvH4_2g27690 FvH4_2g27690 FvH4_2g27690 FvH4_2g27690
malus_domestica	MD00G1063400.v1.1
prunus_persica	Prupe.1G490900_v2.0.a1
pyrus_communis	pycom15g30630
rosa_chinensis	RchiOBHm_Chr6g0296551
rosa_laevigata	RLG00000011682 RLG00000011683 RLG00000011684
rosa_multiflora	Rmu_co8382091.1_g000001 Rmu_sc0004318.1_g000001 Rmu_sc0016638.1_g000002
rosa_roxburghii	Rroxscaffold_7G00171450 Rroxscaffold_7G00171460 Rroxscaffold_7G00178670
rosa_rugosa	Rorug06G0263000 Rorug06G0263100
rosa_samantha	Rh4BG380500 Rh4CG395000 Rh6AG374600 Rh6AG374800 Rh6BG383000 Rh6CG388300 Rh6DG375700
rosa_wichuraiana	Rw6G032670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	113
Acc36I	ACCTGC	1 cut(s)	495
AccB1I	GGYRCC	3 cut(s)	58, 949, 1311
AccII	CGCG	3 cut(s)	821, 1332, 1334
AccIII	TCCGGA	1 cut(s)	457
AciI	CCGC	8 cut(s)	69, 138, 159, 237, 267, 270, 285, 1100
AcoI	YGGCCR	2 cut(s)	66, 225
AcsI	RAATTY	3 cut(s)	8, 932, 1256
AcuI	CTGAAG	1 cut(s)	682
AcyI	GRCGYC	2 cut(s)	59, 110
AdeI	CACNNNGTG	1 cut(s)	1584
AfaI	GTAC	5 cut(s)	343, 529, 661, 1077, 1375
AfiI	CCNNNNNNNGG	6 cut(s)	223, 611, 724, 945, 1497, 1508
AflII	CTTAAG	1 cut(s)	1664
AjnI	CCWGG	2 cut(s)	604, 825
AluBI	AGCT	8 cut(s)	210, 473, 584, 878, 900, 1238, 1619, 1673
AluI	AGCT	8 cut(s)	210, 473, 584, 878, 900, 1238, 1619, 1673
Alw21I	GWGCWC	5 cut(s)	212, 902, 964, 1055, 1471
Alw44I	GTGCAC	1 cut(s)	1467
Aor13HI	TCCGGA	1 cut(s)	457
AoxI	GGCC	8 cut(s)	34, 66, 225, 281, 1139, 1145, 1499, 1575
ApaLI	GTGCAC	1 cut(s)	1467
ApeKI	GCWGC	5 cut(s)	292, 470, 581, 1176, 1442
ApoI	RAATTY	3 cut(s)	8, 932, 1256
ArsI	GACNNNNNNTTYG	4 cut(s)	359, 391, 1094, 1126
AspA2I	CCTAGG	1 cut(s)	1142
AspLEI	GCGC	4 cut(s)	61, 821, 865, 1334
AspS9I	GGNCC	7 cut(s)	282, 558, 1102, 1139, 1146, 1167, 1677
AsuHPI	GGTGA	3 cut(s)	506, 696, 1286
AvaII	GGWCC	4 cut(s)	558, 1102, 1167, 1677
AvrII	CCTAGG	1 cut(s)	1142
AxyI	CCTNAGG	1 cut(s)	1171
BaeGI	GKGCMC	1 cut(s)	1471
BanI	GGYRCC	3 cut(s)	58, 949, 1311
BanII	GRGCYC	2 cut(s)	212, 902
BbsI	GAAGAC	3 cut(s)	903, 1470, 1616
Bbv12I	GWGCWC	5 cut(s)	212, 902, 964, 1055, 1471
BbvCI	CCTCAGC	2 cut(s)	1000, 1410
BbvI	GCAGC	5 cut(s)	304, 482, 593, 1188, 1429
BccI	CCATC	5 cut(s)	58, 1226, 1431, 1506, 1599
BceAI	ACGGC	3 cut(s)	240, 388, 1325
BciT130I	CCWGG	2 cut(s)	606, 827
BfaI	CTAG	6 cut(s)	279, 1037, 1068, 1143, 1164, 1620
BfmI	CTRYAG	4 cut(s)	631, 915, 1443, 1641
BfoI	RGCGCY	2 cut(s)	62, 866
BfrI	CTTAAG	1 cut(s)	1664
BfuAI	ACCTGC	1 cut(s)	495
BglII	AGATCT	2 cut(s)	131, 1534
BisI	GCNGC	7 cut(s)	69, 268, 293, 471, 582, 1177, 1443
BlnI	CCTAGG	1 cut(s)	1142
BlsI	GCNGC	7 cut(s)	70, 269, 294, 472, 583, 1178, 1444
Bme1390I	CCNGG	2 cut(s)	606, 827
Bme18I	GGWCC	4 cut(s)	558, 1102, 1167, 1677
BmgT120I	GGNCC	7 cut(s)	282, 558, 1102, 1139, 1146, 1167, 1677
BmiI	GGNNCC	8 cut(s)	60, 310, 456, 951, 1104, 1148, 1313, 1518
BmrFI	CCNGG	2 cut(s)	606, 827
BmsI	GCATC	4 cut(s)	80, 128, 1105, 1411
BpiI	GAAGAC	3 cut(s)	903, 1470, 1616
BplI	GAGNNNNNCTC	2 cut(s)	457, 489
BpmI	CTGGAG	2 cut(s)	112, 834
Bpu10I	CCTNAGC	2 cut(s)	1000, 1410
BpuEI	CTTGAG	3 cut(s)	30, 864, 947
BsaHI	GRCGYC	2 cut(s)	59, 110
BsaJI	CCNNGG	3 cut(s)	304, 826, 1142
BsaWI	WCCGGW	3 cut(s)	395, 457, 560
Bsc4I	CCNNNNNNNGG	6 cut(s)	223, 611, 724, 945, 1497, 1508
Bse118I	RCCGGY	3 cut(s)	188, 227, 568
Bse1I	ACTGG	3 cut(s)	789, 939, 1520
Bse21I	CCTNAGG	1 cut(s)	1171
Bse3DI	GCAATG	3 cut(s)	487, 628, 1481
BseAI	TCCGGA	1 cut(s)	457
BseBI	CCWGG	2 cut(s)	606, 827
BseDI	CCNNGG	3 cut(s)	304, 826, 1142
BseGI	GGATG	8 cut(s)	71, 119, 430, 718, 1426, 1442, 1517, 1591
BseLI	CCNNNNNNNGG	6 cut(s)	223, 611, 724, 945, 1497, 1508
BseMI	GCAATG	3 cut(s)	487, 628, 1481
BseMII	CTCAG	5 cut(s)	677, 1014, 1185, 1391, 1401
BseNI	ACTGG	3 cut(s)	789, 939, 1520
BseRI	GAGGAG	2 cut(s)	115, 1149
BseSI	GKGCMC	1 cut(s)	1471
BseX3I	CGGCCG	1 cut(s)	225
BseXI	GCAGC	5 cut(s)	304, 482, 593, 1188, 1429
BseYI	CCCAGC	2 cut(s)	490, 944
BsgI	GTGCAG	1 cut(s)	489
Bsh1236I	CGCG	3 cut(s)	821, 1332, 1334
Bsh1285I	CGRYCG	1 cut(s)	228
BshFI	GGCC	8 cut(s)	36, 68, 227, 283, 1141, 1147, 1501, 1577
BshNI	GGYRCC	3 cut(s)	58, 949, 1311
BsiEI	CGRYCG	1 cut(s)	228
BsiHKAI	GWGCWC	5 cut(s)	212, 902, 964, 1055, 1471
BsiSI	CCGG	6 cut(s)	189, 228, 396, 458, 561, 569
BslFI	GGGAC	2 cut(s)	1174, 1320
BslI	CCNNNNNNNGG	6 cut(s)	223, 611, 724, 945, 1497, 1508
BsmFI	GGGAC	2 cut(s)	1174, 1320
BsnI	GGCC	8 cut(s)	36, 68, 227, 283, 1141, 1147, 1501, 1577
Bsp1286I	GDGCHC	5 cut(s)	212, 902, 964, 1055, 1471
Bsp13I	TCCGGA	1 cut(s)	457
Bsp143I	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
BspACI	CCGC	8 cut(s)	69, 138, 159, 237, 267, 270, 285, 1100
BspANI	GGCC	8 cut(s)	36, 68, 227, 283, 1141, 1147, 1501, 1577
BspCNI	CTCAG	5 cut(s)	676, 1013, 1184, 1390, 1402
BspEI	TCCGGA	1 cut(s)	457
BspFNI	CGCG	3 cut(s)	821, 1332, 1334
BspLI	GGNNCC	8 cut(s)	60, 310, 456, 951, 1104, 1148, 1313, 1518
BspMAI	CTGCAG	2 cut(s)	1447, 1645
BspMI	ACCTGC	1 cut(s)	495
BspQI	GCTCTTC	1 cut(s)	73
BspT107I	GGYRCC	3 cut(s)	58, 949, 1311
BspTI	CTTAAG	1 cut(s)	1664
BsrDI	GCAATG	3 cut(s)	487, 628, 1481
BsrFI	RCCGGY	3 cut(s)	188, 227, 568
BsrI	ACTGG	3 cut(s)	789, 939, 1520
BssAI	RCCGGY	3 cut(s)	188, 227, 568
BssECI	CCNNGG	3 cut(s)	304, 826, 1142
BssMI	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
BssNI	GRCGYC	2 cut(s)	59, 110
BssT1I	CCWWGG	2 cut(s)	304, 1142
Bst2UI	CCWGG	2 cut(s)	606, 827
Bst4CI	ACNGT	1 cut(s)	676
Bst6I	CTCTTC	2 cut(s)	73, 1386
BstACI	GRCGYC	2 cut(s)	59, 110
BstAFI	CTTAAG	1 cut(s)	1664
BstC8I	GCNNGC	5 cut(s)	229, 285, 570, 1341, 1467
BstDEI	CTNAG	9 cut(s)	663, 687, 730, 766, 1000, 1171, 1377, 1410, 1704
BstF5I	GGATG	8 cut(s)	71, 119, 430, 718, 1426, 1442, 1517, 1591
BstFNI	CGCG	3 cut(s)	821, 1332, 1334
BstH2I	RGCGCY	2 cut(s)	62, 866
BstHHI	GCGC	4 cut(s)	61, 821, 865, 1334
BstKTI	GATC	7 cut(s)	134, 184, 499, 925, 1036, 1067, 1537
BstMBI	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
BstMCI	CGRYCG	1 cut(s)	228
BstMWI	GCNNNNNNNGC	6 cut(s)	65, 289, 578, 1340, 1378, 1421
BstNI	CCWGG	2 cut(s)	606, 827
BstSCI	CCNGG	2 cut(s)	604, 825
BstSFI	CTRYAG	4 cut(s)	631, 915, 1443, 1641
BstSLI	GKGCMC	1 cut(s)	1471
BstUI	CGCG	3 cut(s)	821, 1332, 1334
BstV1I	GCAGC	5 cut(s)	304, 482, 593, 1188, 1429
BstV2I	GAAGAC	3 cut(s)	903, 1470, 1616
BstX2I	RGATCY	2 cut(s)	131, 1534
BstYI	RGATCY	2 cut(s)	131, 1534
BstZI	CGGCCG	1 cut(s)	225
Bsu36I	CCTNAGG	1 cut(s)	1171
BsuRI	GGCC	8 cut(s)	36, 68, 227, 283, 1141, 1147, 1501, 1577
BtsCI	GGATG	8 cut(s)	71, 119, 430, 718, 1426, 1442, 1517, 1591
BtsI	GCAGTG	2 cut(s)	1078, 1350
BtsIMutI	CAGTG	3 cut(s)	946, 1078, 1350
BveI	ACCTGC	1 cut(s)	495
Cac8I	GCNNGC	5 cut(s)	229, 285, 570, 1341, 1467
CfoI	GCGC	4 cut(s)	61, 821, 865, 1334
Cfr10I	RCCGGY	3 cut(s)	188, 227, 568
Cfr13I	GGNCC	7 cut(s)	282, 558, 1102, 1139, 1146, 1167, 1677
Csp6I	GTAC	5 cut(s)	342, 528, 660, 1076, 1374
CspCI	CAANNNNNGTGG	2 cut(s)	1006, 1041
CviAII	CATG	4 cut(s)	331, 1013, 1045, 1180
CviQI	GTAC	5 cut(s)	342, 528, 660, 1076, 1374
DdeI	CTNAG	9 cut(s)	663, 687, 730, 766, 1000, 1171, 1377, 1410, 1704
DinI	GGCGCC	1 cut(s)	60
DpnI	GATC	7 cut(s)	133, 183, 498, 924, 1035, 1066, 1536
DpnII	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
DraIII	CACNNNGTG	1 cut(s)	1584
EaeI	YGGCCR	2 cut(s)	66, 225
EagI	CGGCCG	1 cut(s)	225
Eam1104I	CTCTTC	2 cut(s)	73, 1386
EarI	CTCTTC	2 cut(s)	73, 1386
EciI	GGCGGA	4 cut(s)	127, 148, 252, 285
Ecl136II	GAGCTC	2 cut(s)	210, 900
EclXI	CGGCCG	1 cut(s)	225
Eco130I	CCWWGG	2 cut(s)	304, 1142
Eco24I	GRGCYC	2 cut(s)	212, 902
Eco47I	GGWCC	4 cut(s)	558, 1102, 1167, 1677
Eco52I	CGGCCG	1 cut(s)	225
Eco53kI	GAGCTC	2 cut(s)	210, 900
Eco57I	CTGAAG	1 cut(s)	682
Eco81I	CCTNAGG	1 cut(s)	1171
EcoICRI	GAGCTC	2 cut(s)	210, 900
EcoO109I	RGGNCCY	3 cut(s)	1139, 1146, 1167
EcoRI	GAATTC	1 cut(s)	8
EcoRII	CCWGG	2 cut(s)	604, 825
EcoT14I	CCWWGG	2 cut(s)	304, 1142
EcoT22I	ATGCAT	1 cut(s)	121
EcoT38I	GRGCYC	2 cut(s)	212, 902
EgeI	GGCGCC	1 cut(s)	60
EheI	GGCGCC	1 cut(s)	60
ErhI	CCWWGG	2 cut(s)	304, 1142
FaeI	CATG	4 cut(s)	334, 1016, 1048, 1183
FalI	AAGNNNNNCTT	4 cut(s)	680, 712, 1144, 1176
FaqI	GGGAC	2 cut(s)	1174, 1320
FatI	CATG	4 cut(s)	330, 1012, 1044, 1179
FauI	CCCGC	1 cut(s)	292
Fnu4HI	GCNGC	7 cut(s)	69, 268, 293, 471, 582, 1177, 1443
FokI	GGATG	8 cut(s)	58, 106, 437, 725, 1433, 1449, 1524, 1578
FriOI	GRGCYC	2 cut(s)	212, 902
Fsp4HI	GCNGC	7 cut(s)	69, 268, 293, 471, 582, 1177, 1443
FspBI	CTAG	6 cut(s)	279, 1037, 1068, 1143, 1164, 1620
GlaI	GCGC	4 cut(s)	60, 820, 864, 1333
GluI	GCNGC	7 cut(s)	69, 268, 293, 471, 582, 1177, 1443
GsaI	CCCAGC	2 cut(s)	494, 948
GsuI	CTGGAG	2 cut(s)	112, 834
HaeII	RGCGCY	2 cut(s)	62, 866
HaeIII	GGCC	8 cut(s)	36, 68, 227, 283, 1141, 1147, 1501, 1577
HapII	CCGG	6 cut(s)	189, 228, 396, 458, 561, 569
HhaI	GCGC	4 cut(s)	61, 821, 865, 1334
Hin1I	GRCGYC	2 cut(s)	59, 110
Hin1II	CATG	4 cut(s)	334, 1016, 1048, 1183
Hin6I	GCGC	4 cut(s)	59, 819, 863, 1332
HinP1I	GCGC	4 cut(s)	59, 819, 863, 1332
HindIII	AAGCTT	1 cut(s)	1671
HinfI	GANTC	8 cut(s)	240, 273, 326, 587, 734, 761, 995, 1505
HpaII	CCGG	6 cut(s)	189, 228, 396, 458, 561, 569
HphI	GGTGA	3 cut(s)	506, 696, 1286
Hpy166II	GTNNAC	4 cut(s)	704, 1076, 1469, 1567
Hpy188I	TCNGA	6 cut(s)	313, 477, 592, 781, 904, 1539
Hpy188III	TCNNGA	9 cut(s)	75, 129, 176, 458, 813, 926, 1037, 1509, 1595
Hpy8I	GTNNAC	4 cut(s)	704, 1076, 1469, 1567
Hpy99I	CGWCG	6 cut(s)	112, 115, 182, 361, 364, 374
HpyAV	CCTTC	7 cut(s)	415, 980, 984, 1203, 1265, 1448, 1642
HpyCH4III	ACNGT	1 cut(s)	676
HpyCH4IV	ACGT	3 cut(s)	110, 356, 1363
HpyF10VI	GCNNNNNNNGC	6 cut(s)	65, 289, 578, 1340, 1378, 1421
HpyF3I	CTNAG	9 cut(s)	663, 687, 730, 766, 1000, 1171, 1377, 1410, 1704
HpySE526I	ACGT	3 cut(s)	110, 356, 1363
Hsp92I	GRCGYC	2 cut(s)	59, 110
Hsp92II	CATG	4 cut(s)	334, 1016, 1048, 1183
HspAI	GCGC	4 cut(s)	59, 819, 863, 1332
KasI	GGCGCC	1 cut(s)	58
Kpn2I	TCCGGA	1 cut(s)	457
KroI	GCCGGC	2 cut(s)	227, 568
KroNI	GCCGGC	2 cut(s)	229, 570
Kzo9I	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
LguI	GCTCTTC	1 cut(s)	73
LmnI	GCTCC	9 cut(s)	314, 460, 478, 897, 967, 1235, 1384, 1516, 1616
Lsp1109I	GCAGC	5 cut(s)	304, 482, 593, 1188, 1429
LweI	GCATC	4 cut(s)	80, 128, 1105, 1411
MaeI	CTAG	6 cut(s)	279, 1037, 1068, 1143, 1164, 1620
MaeII	ACGT	3 cut(s)	110, 356, 1363
MaeIII	GTNAC	3 cut(s)	274, 600, 980
MalI	GATC	7 cut(s)	133, 183, 498, 924, 1035, 1066, 1536
MboI	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
MflI	RGATCY	2 cut(s)	131, 1534
MhlI	GDGCHC	5 cut(s)	212, 902, 964, 1055, 1471
Mly113I	GGCGCC	1 cut(s)	59
MlyI	GAGTC	2 cut(s)	282, 1499
MmeI	TCCRAC	1 cut(s)	336
Mph1103I	ATGCAT	1 cut(s)	121
MreI	CGCCGGCG	1 cut(s)	568
MroI	TCCGGA	1 cut(s)	457
MroNI	GCCGGC	2 cut(s)	227, 568
MseI	TTAA	6 cut(s)	318, 408, 678, 1092, 1557, 1665
MspA1I	CMGCKG	1 cut(s)	584
MspCI	CTTAAG	1 cut(s)	1664
MspI	CCGG	6 cut(s)	189, 228, 396, 458, 561, 569
MspR9I	CCNGG	2 cut(s)	606, 827
MvaI	CCWGG	2 cut(s)	606, 827
MvnI	CGCG	3 cut(s)	821, 1332, 1334
MwoI	GCNNNNNNNGC	6 cut(s)	65, 289, 578, 1340, 1378, 1421
NaeI	GCCGGC	2 cut(s)	229, 570
NarI	GGCGCC	1 cut(s)	59
NdeII	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
NgoMIV	GCCGGC	2 cut(s)	227, 568
NlaIII	CATG	4 cut(s)	334, 1016, 1048, 1183
NlaIV	GGNNCC	8 cut(s)	60, 310, 456, 951, 1104, 1148, 1313, 1518
NmuCI	GTSAC	1 cut(s)	274
NsiI	ATGCAT	1 cut(s)	121
PciSI	GCTCTTC	1 cut(s)	73
PcsI	WCGNNNNNNNCGW	2 cut(s)	252, 1369
PdiI	GCCGGC	2 cut(s)	229, 570
PfeI	GAWTC	6 cut(s)	240, 326, 587, 734, 761, 995
PkrI	GCNGC	7 cut(s)	70, 269, 294, 472, 583, 1178, 1444
PleI	GAGTC	2 cut(s)	281, 1499
PluTI	GGCGCC	1 cut(s)	62
PpsI	GAGTC	2 cut(s)	281, 1499
PpuMI	RGGWCCY	1 cut(s)	1167
Psp124BI	GAGCTC	2 cut(s)	212, 902
Psp5II	RGGWCCY	1 cut(s)	1167
Psp6I	CCWGG	2 cut(s)	604, 825
PspFI	CCCAGC	2 cut(s)	490, 944
PspGI	CCWGG	2 cut(s)	604, 825
PspN4I	GGNNCC	8 cut(s)	60, 310, 456, 951, 1104, 1148, 1313, 1518
PspPI	GGNCC	7 cut(s)	282, 558, 1102, 1139, 1146, 1167, 1677
PspPPI	RGGWCCY	1 cut(s)	1167
PstI	CTGCAG	2 cut(s)	1447, 1645
PsuI	RGATCY	2 cut(s)	131, 1534
PvuII	CAGCTG	1 cut(s)	584
RsaI	GTAC	5 cut(s)	343, 529, 661, 1077, 1375
RsaNI	GTAC	5 cut(s)	342, 528, 660, 1076, 1374
SacI	GAGCTC	2 cut(s)	212, 902
SapI	GCTCTTC	1 cut(s)	73
SaqAI	TTAA	6 cut(s)	318, 408, 678, 1092, 1557, 1665
SatI	GCNGC	7 cut(s)	69, 268, 293, 471, 582, 1177, 1443
Sau3AI	GATC	7 cut(s)	131, 181, 496, 922, 1033, 1064, 1534
Sau96I	GGNCC	7 cut(s)	282, 558, 1102, 1139, 1146, 1167, 1677
SchI	GAGTC	2 cut(s)	282, 1499
ScrFI	CCNGG	2 cut(s)	606, 827
SduI	GDGCHC	5 cut(s)	212, 902, 964, 1055, 1471
SfaNI	GCATC	4 cut(s)	80, 128, 1105, 1411
SfcI	CTRYAG	4 cut(s)	631, 915, 1443, 1641
SfoI	GGCGCC	1 cut(s)	60
SgrAI	CRCCGGYG	1 cut(s)	568
SinI	GGWCC	4 cut(s)	558, 1102, 1167, 1677
SmlI	CTYRAG	4 cut(s)	45, 879, 926, 1664
SmoI	CTYRAG	4 cut(s)	45, 879, 926, 1664
SsiI	CCGC	8 cut(s)	69, 138, 159, 237, 267, 270, 285, 1100
SspDI	GGCGCC	1 cut(s)	58
SspI	AATATT	1 cut(s)	1110
SspMI	CTAG	6 cut(s)	279, 1037, 1068, 1143, 1164, 1620
SstI	GAGCTC	2 cut(s)	212, 902
StyD4I	CCNGG	2 cut(s)	604, 825
StyI	CCWWGG	2 cut(s)	304, 1142
TaaI	ACNGT	1 cut(s)	676
TaiI	ACGT	3 cut(s)	113, 359, 1366
TaqI	TCGA	3 cut(s)	177, 206, 1063
TauI	GCSGC	2 cut(s)	71, 270
TfiI	GAWTC	6 cut(s)	240, 326, 587, 734, 761, 995
Tru1I	TTAA	6 cut(s)	318, 408, 678, 1092, 1557, 1665
Tru9I	TTAA	6 cut(s)	318, 408, 678, 1092, 1557, 1665
TscAI	CASTG	3 cut(s)	946, 1078, 1350
TseFI	GTSAC	1 cut(s)	274
TseI	GCWGC	5 cut(s)	292, 470, 581, 1176, 1442
Tsp45I	GTSAC	1 cut(s)	274
TspDTI	ATGAA	5 cut(s)	825, 1033, 1196, 1370, 1470
TspGWI	ACGGA	3 cut(s)	38, 1139, 1480
TspRI	CASTG	3 cut(s)	946, 1078, 1350
Vha464I	CTTAAG	1 cut(s)	1664
VneI	GTGCAC	1 cut(s)	1467
VpaK11BI	GGWCC	4 cut(s)	558, 1102, 1167, 1677
XapI	RAATTY	3 cut(s)	8, 932, 1256
XbaI	TCTAGA	1 cut(s)	1036
XmaJI	CCTAGG	1 cut(s)	1142
XspI	CTAG	6 cut(s)	279, 1037, 1068, 1143, 1164, 1620
ZraI	GACGTC	1 cut(s)	111
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.