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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g21171 |
| rosa_laevigata | RLG00000008636 RLG00000012538 RLG00000012539 RLG00000012540 RLG00000012541 RLG00000036892 |
| rosa_multiflora | Rmu_sc0007546.1_g000019 |
| rosa_roxburghii | Rroxscaffold_7G00181990 |
| rosa_rugosa | Rorug06G0182900 |
| rosa_samantha | Rh6BG299700 Rh6BG299800 Rh6BG299900 Rh6DG291400 |
| rosa_wichuraiana | Rw6G025450 Rw6G025460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 273 |
| AciI | CCGC | 1 cut(s) | 432 |
| AclWI | GGATC | 2 cut(s) | 129, 443 |
| AcsI | RAATTY | 1 cut(s) | 353 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 415 |
| AflIII | ACRYGT | 1 cut(s) | 279 |
| AgsI | TTSAA | 2 cut(s) | 359, 506 |
| AhlI | ACTAGT | 1 cut(s) | 268 |
| AjnI | CCWGG | 2 cut(s) | 99, 408 |
| AluBI | AGCT | 2 cut(s) | 69, 372 |
| AluI | AGCT | 2 cut(s) | 69, 372 |
| AlwI | GGATC | 2 cut(s) | 129, 443 |
| AoxI | GGCC | 2 cut(s) | 102, 242 |
| ApeKI | GCWGC | 1 cut(s) | 520 |
| ApoI | RAATTY | 1 cut(s) | 353 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 99, 131 |
| AspS9I | GGNCC | 3 cut(s) | 103, 303, 429 |
| AsuHPI | GGTGA | 1 cut(s) | 41 |
| AvaII | GGWCC | 2 cut(s) | 303, 429 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 40, 73 |
| BbvI | GCAGC | 1 cut(s) | 532 |
| BccI | CCATC | 2 cut(s) | 227, 538 |
| BciT130I | CCWGG | 2 cut(s) | 101, 410 |
| BcuI | ACTAGT | 1 cut(s) | 268 |
| BfaI | CTAG | 4 cut(s) | 170, 252, 269, 389 |
| BfmI | CTRYAG | 1 cut(s) | 453 |
| BisI | GCNGC | 1 cut(s) | 521 |
| BlsI | GCNGC | 1 cut(s) | 522 |
| Bme1390I | CCNGG | 2 cut(s) | 101, 410 |
| Bme18I | GGWCC | 2 cut(s) | 303, 429 |
| BmgT120I | GGNCC | 3 cut(s) | 103, 303, 429 |
| BmrFI | CCNGG | 2 cut(s) | 101, 410 |
| BsaJI | CCNNGG | 3 cut(s) | 99, 151, 285 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 517, 547 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 415 |
| Bse118I | RCCGGY | 1 cut(s) | 26 |
| Bse1I | ACTGG | 1 cut(s) | 365 |
| BseBI | CCWGG | 2 cut(s) | 101, 410 |
| BseDI | CCNNGG | 3 cut(s) | 99, 151, 285 |
| BseGI | GGATG | 1 cut(s) | 95 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 415 |
| BseNI | ACTGG | 1 cut(s) | 365 |
| BseXI | GCAGC | 1 cut(s) | 532 |
| BseYI | CCCAGC | 1 cut(s) | 559 |
| BshFI | GGCC | 2 cut(s) | 104, 244 |
| BsiSI | CCGG | 1 cut(s) | 27 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 415 |
| BsmI | GAATGC | 1 cut(s) | 553 |
| BsnI | GGCC | 2 cut(s) | 104, 244 |
| Bsp143I | GATC | 3 cut(s) | 121, 394, 448 |
| BspACI | CCGC | 1 cut(s) | 432 |
| BspANI | GGCC | 2 cut(s) | 104, 244 |
| BspHI | TCATGA | 1 cut(s) | 175 |
| BspMAI | CTGCAG | 1 cut(s) | 457 |
| BspPI | GGATC | 2 cut(s) | 129, 443 |
| BsrFI | RCCGGY | 1 cut(s) | 26 |
| BsrI | ACTGG | 1 cut(s) | 365 |
| BssAI | RCCGGY | 1 cut(s) | 26 |
| BssECI | CCNNGG | 3 cut(s) | 99, 151, 285 |
| BssMI | GATC | 3 cut(s) | 121, 394, 448 |
| Bst2UI | CCWGG | 2 cut(s) | 101, 410 |
| Bst4CI | ACNGT | 2 cut(s) | 182, 319 |
| BstEII | GGTNACC | 1 cut(s) | 29 |
| BstF5I | GGATG | 1 cut(s) | 95 |
| BstKTI | GATC | 3 cut(s) | 124, 397, 451 |
| BstMBI | GATC | 3 cut(s) | 121, 394, 448 |
| BstNI | CCWGG | 2 cut(s) | 101, 410 |
| BstNSI | RCATGY | 1 cut(s) | 283 |
| BstPI | GGTNACC | 1 cut(s) | 29 |
| BstSCI | CCNGG | 2 cut(s) | 99, 408 |
| BstSFI | CTRYAG | 1 cut(s) | 453 |
| BstV1I | GCAGC | 1 cut(s) | 532 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| BsuRI | GGCC | 2 cut(s) | 104, 244 |
| BtsCI | GGATG | 1 cut(s) | 95 |
| CciI | TCATGA | 1 cut(s) | 175 |
| Cfr10I | RCCGGY | 1 cut(s) | 26 |
| Cfr13I | GGNCC | 3 cut(s) | 103, 303, 429 |
| CviAII | CATG | 2 cut(s) | 176, 280 |
| CviJI | RGCY | 5 cut(s) | 69, 104, 244, 372, 419 |
| CviKI_1 | RGCY | 5 cut(s) | 69, 104, 244, 372, 419 |
| DpnI | GATC | 3 cut(s) | 123, 396, 450 |
| DpnII | GATC | 3 cut(s) | 121, 394, 448 |
| Eco47I | GGWCC | 2 cut(s) | 303, 429 |
| Eco91I | GGTNACC | 1 cut(s) | 29 |
| EcoO65I | GGTNACC | 1 cut(s) | 29 |
| EcoRII | CCWGG | 2 cut(s) | 99, 408 |
| FaeI | CATG | 2 cut(s) | 179, 283 |
| FatI | CATG | 2 cut(s) | 175, 279 |
| FblI | GTMKAC | 1 cut(s) | 273 |
| Fnu4HI | GCNGC | 1 cut(s) | 521 |
| FokI | GGATG | 1 cut(s) | 82 |
| Fsp4HI | GCNGC | 1 cut(s) | 521 |
| FspBI | CTAG | 4 cut(s) | 170, 252, 269, 389 |
| GluI | GCNGC | 1 cut(s) | 521 |
| GsaI | CCCAGC | 1 cut(s) | 563 |
| HaeIII | GGCC | 2 cut(s) | 104, 244 |
| HapII | CCGG | 1 cut(s) | 27 |
| Hin1II | CATG | 2 cut(s) | 179, 283 |
| HinfI | GANTC | 2 cut(s) | 128, 145 |
| HpaII | CCGG | 1 cut(s) | 27 |
| HphI | GGTGA | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 1 cut(s) | 274 |
| Hpy188I | TCNGA | 1 cut(s) | 286 |
| Hpy188III | TCNNGA | 4 cut(s) | 125, 176, 359, 544 |
| Hpy8I | GTNNAC | 1 cut(s) | 274 |
| HpyCH4III | ACNGT | 2 cut(s) | 182, 319 |
| HpyCH4V | TGCA | 2 cut(s) | 455, 539 |
| Hsp92II | CATG | 2 cut(s) | 179, 283 |
| Kzo9I | GATC | 3 cut(s) | 121, 394, 448 |
| Lsp1109I | GCAGC | 1 cut(s) | 532 |
| MaeI | CTAG | 4 cut(s) | 170, 252, 269, 389 |
| MaeIII | GTNAC | 1 cut(s) | 29 |
| MalI | GATC | 3 cut(s) | 123, 396, 450 |
| MboI | GATC | 3 cut(s) | 121, 394, 448 |
| MboII | GAAGA | 1 cut(s) | 478 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MluCI | AATT | 2 cut(s) | 353, 486 |
| MlyI | GAGTC | 2 cut(s) | 122, 139 |
| MnlI | CCTC | 7 cut(s) | 79, 120, 161, 255, 280, 357, 437 |
| MslI | CAYNNNNRTG | 1 cut(s) | 180 |
| MspI | CCGG | 1 cut(s) | 27 |
| MspR9I | CCNGG | 2 cut(s) | 101, 410 |
| Mva1269I | GAATGC | 1 cut(s) | 553 |
| MvaI | CCWGG | 2 cut(s) | 101, 410 |
| NdeII | GATC | 3 cut(s) | 121, 394, 448 |
| NlaIII | CATG | 2 cut(s) | 179, 283 |
| NmuCI | GTSAC | 1 cut(s) | 29 |
| NspI | RCATGY | 1 cut(s) | 283 |
| PagI | TCATGA | 1 cut(s) | 175 |
| PciI | ACATGT | 1 cut(s) | 279 |
| PctI | GAATGC | 1 cut(s) | 553 |
| PkrI | GCNGC | 1 cut(s) | 522 |
| PleI | GAGTC | 2 cut(s) | 122, 139 |
| PpsI | GAGTC | 2 cut(s) | 122, 139 |
| PscI | ACATGT | 1 cut(s) | 279 |
| Psp6I | CCWGG | 2 cut(s) | 99, 408 |
| PspEI | GGTNACC | 1 cut(s) | 29 |
| PspFI | CCCAGC | 1 cut(s) | 559 |
| PspGI | CCWGG | 2 cut(s) | 99, 408 |
| PspPI | GGNCC | 3 cut(s) | 103, 303, 429 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 396, 428 |
| PstI | CTGCAG | 1 cut(s) | 457 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| RseI | CAYNNNNRTG | 1 cut(s) | 180 |
| SatI | GCNGC | 1 cut(s) | 521 |
| Sau3AI | GATC | 3 cut(s) | 121, 394, 448 |
| Sau96I | GGNCC | 3 cut(s) | 103, 303, 429 |
| SbfI | CCTGCAGG | 1 cut(s) | 457 |
| SchI | GAGTC | 2 cut(s) | 122, 139 |
| ScrFI | CCNGG | 2 cut(s) | 101, 410 |
| SdaI | CCTGCAGG | 1 cut(s) | 457 |
| SetI | ASST | 4 cut(s) | 36, 71, 112, 374 |
| SfcI | CTRYAG | 1 cut(s) | 453 |
| SinI | GGWCC | 2 cut(s) | 303, 429 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 180 |
| SpeI | ACTAGT | 1 cut(s) | 268 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 457 |
| Sse9I | AATT | 2 cut(s) | 353, 486 |
| SsiI | CCGC | 1 cut(s) | 432 |
| SspMI | CTAG | 4 cut(s) | 170, 252, 269, 389 |
| StyD4I | CCNGG | 2 cut(s) | 99, 408 |
| TaaI | ACNGT | 2 cut(s) | 182, 319 |
| TaqII | GACCGA | 1 cut(s) | 320 |
| TasI | AATT | 2 cut(s) | 353, 486 |
| TseFI | GTSAC | 1 cut(s) | 29 |
| TseI | GCWGC | 1 cut(s) | 520 |
| Tsp45I | GTSAC | 1 cut(s) | 29 |
| TspDTI | ATGAA | 3 cut(s) | 17, 164, 187 |
| VpaK11BI | GGWCC | 2 cut(s) | 303, 429 |
| XapI | RAATTY | 1 cut(s) | 353 |
| XceI | RCATGY | 1 cut(s) | 283 |
| XmiI | GTMKAC | 1 cut(s) | 273 |
| XspI | CTAG | 4 cut(s) | 170, 252, 269, 389 |