Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0005877

Physical Location & Seq

Genomic Coordinates Forward (+)

34140516 .. 34150606

Gene Structure 10091 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013621

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGGTGCACAGAAGAAAGGCGCGTCTAGGGCTTCAGAAGACCCTGAGGAATTGGCACGTGTCCCACTCCAGGCCATCCTCCTAGCCGATAGTTTCACCACCAAATTCCGACCCATCACTCTTGAACGCCCCAAAGTGCTGTTGCCGTTGGTCAATGCCCCGATGATCAGTTACACGTTGGCATGGCTTGAGTCTGCTGGCGTTGAGGAGGTTTTTGTTTTCTGCTGTGCTCACTCCAAGCAAGTCATCACTTATTTGGACAATTCTGAGTGGTTTTCCCAACCAAACTTCACCGTCACCACAATTGAGTCACATGATTCTGTTAGTGCCGGAGATGCTCTGCGCTTGATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTAGTCAGTGGGGATACCGTGAGCAACATGTCGCTTACTCAGGTGCTTCAAGAACATAAAGAGAGAAGGAAGAAGGATAGTAATGCCGTAATGACAATTGTTATTAAACGGTCAAAGCCTTCTCCAATCACTCGCCAATCCCGACTGGGCACTGATGAGCTCTTTATGGCAGTAGATCCCAACACAAAGCAGCTCTTATATTATGAGGACAAGGCAGACCATGCAAAGGGATCTATATATCTTGATAAGATATTGCTTGCTGATAAGTCTTCGATTTCTCTGCATAATGACAAACAGGATTGCTATATTGACATCTGCTCTCCTGAAGTCCTCAGCCTTTTCACAGACAATTTTGACTATCAACATTTACGTCGTCATTTTTTAAAGGGATTGCTTCTTGATGATATTATGGGTTACAAAATATTCACACATGAAATTCACTCGACTTATGCGGCTAGGATTGACAACTTCAGAAGCTATGATACAATCAGTAAGGACATAATTCAGAGATGGACTTACCCATTGGTGCCAGATGTTAAGTTTTTCGGAGATTCTTCAACGAAGCTGGAAAGACGGGGGATGTATCGAGCCTCAGATATAGGGCAATCACGATCTGCACAGATTGGTCCTTTTACAGTCATTGGGAATGGCACCAAGATTGGGGACAACACCAAAATTTCAAATTCTGTTATTGGAGAAGGGTGTTCTATTGGACCAAACGTTTCCATAGAAGGTTCTTATATATGGGATAATGTCAACATTGAAGATGGCTGCAAGCTAAGGCATGCTATAGTATGTGATGGAGTGATAATGAAGTCTGGGGCAGTTTTGGAATCAGGTGTAGTTTTGTCTTTCAAGGTTGTGATAGGACAACAATTTATTGTCCCTTCATACTCGAAGGTATCTTTACTTCAACAACCAATAAAGCAAGATAGTGATGAGGAGCTAGAGTATGCTGACAATAGCACTGGGATTGCAGAAATTTCCTCTCTTACACATGCACCGGATATATCAAATGGGGAAATAGCGAACCAACAACAGGAGACTCAGTGTTGGCCTACATCTGAGCTTGGTATTGGTGGGGCTGGTTATGTTTGGTCAGTTTGTGAAGGAGGCCATGATGAAGAGTGGAGGCATTCAGTTGCTCCCATTCCTGCAGAGAAACTTGCTGAGGTGATACAAGGTGCAGAGGATGATCTGGAGTTTGATCAAGATGGCAGTAGTCTCCCACCTTCAGGAGAGCTGAAACTTGATTCTAATGATTCTGATTATGATGGAGAGTCTAGAGATGGTTCCTACTTTGAAAATGAGGTTGAAGCAACCTTCCTAAGAGCTGTGGATGAAAATATTAAAGTAGAGAATGTCGTCTTAGAAGTGAACTCACTGAGATTGTCATACAACAAGCAAACTGCAGACTGTGCTGGAGCTATATTTTATTCAATGATGAAATTGGCATTAGAAACTCCACATAATTCAGCAGTTGAATTGGTCCAAGCTACTACGAAGGTAATTACAAAATGGAAAGGACTGCTGAAGTATTACCTATCAGACATTGATGAAGAGATAGAAGTAATAATGAAATTTGAAGATATGTGTTTGGAGTCCGCTAAGGAGTTCTCCCCCGTGTTCGATAAGATACTCTATCAACTGTATGACCAAGAAGTTATACAGGAAGAGGCTATTCTGAGGTGGGATGATGAAAAGAGAGATGCTGATGAATCAGATAGAATTTTTGTTAGGCAGGCTGAAACATTTATCCAATGGTTGAGAGAGGCATCTGAAGAAGAGGACGAGGAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0002183 GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0019899 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0051020 GO:0065007 GO:0065009 GO:0071704 GO:0097159 GO:0098772 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Hexapep Hexapep_2 NTP_transferase W2

Protein Analysis

729

Amino Acids

81.84

Weight (kDa)

4.65

Isoelectric Point (pI)

48.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTP_transferase	PF00483	25 - 165	5.7e-12	Nucleotidyl transferase
LbH_EIF2B	PF25084	319 - 422	5.8e-39	EIF2B subunit epsilon LbH domain
GMPPB_C	PF25087	332 - 416	5.3e-10	GMPPB C-terminal domain
Hexapep	PF00132	340 - 373	1.3e-07	Bacterial transferase hexapeptide (six repeats)
Hexapep_GlmU	PF24894	341 - 404	9.6e-06	GlmU-like, C-terminal hexapeptide
W2	PF02020	649 - 727	5.5e-18	eIF4-gamma/eIF5/eIF2-epsilon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005877)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34970 AT4G18300
fragaria_vesca	FvH4_2g12670 FvH4_2g12670
malus_domestica	MD00G1051200.v1.1 MD12G1232500.v1.1 MD17G1228000.v1.1
prunus_persica	Prupe.6G335900_v2.0.a1
pyrus_communis	pycom04g19200 pycom12g21490
rosa_chinensis	RchiOBHm_Chr2g0129391 RchiOBHm_Chr6g0273391
rosa_laevigata	RLG00000013621 RLG00000019076
rosa_multiflora	Rmu_sc0001171.1_g000012 Rmu_sc0005891.1_g000011
rosa_roxburghii	Rroxscaffold_2G00114650 Rroxscaffold_7G00195420
rosa_rugosa	Rorug06G0074500
rosa_samantha	Rh2AG338500 Rh2BG346600 Rh2CG326000 Rh2DG364400 Rh6AG189600 Rh6BG193000 Rh6CG192800 Rh6DG184300
rosa_wichuraiana	Rw6G016500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	910, 1034
AccII	CGCG	1 cut(s)	23
AciI	CCGC	2 cut(s)	836, 1989
AclI	AACGTT	1 cut(s)	1104
AclWI	GGATC	2 cut(s)	554, 622
AcsI	RAATTY	7 cut(s)	104, 819, 1059, 1066, 1365, 1964, 2112
AcuI	CTGAAG	6 cut(s)	18, 729, 838, 1602, 1937, 2184
AcvI	CACGTG	1 cut(s)	59
AfiI	CCNNNNNNNGG	5 cut(s)	70, 610, 1044, 1423, 1619
AflIII	ACRYGT	3 cut(s)	58, 174, 411
AjnI	CCWGG	1 cut(s)	69
Alw21I	GWGCWC	3 cut(s)	10, 232, 546
Alw26I	GTCTC	2 cut(s)	1421, 1613
Alw44I	GTGCAC	1 cut(s)	6
AlwI	GGATC	2 cut(s)	554, 622
AoxI	GGCC	3 cut(s)	72, 1439, 1498
ApaLI	GTGCAC	1 cut(s)	6
ApeKI	GCWGC	2 cut(s)	574, 1155
ApoI	RAATTY	7 cut(s)	104, 819, 1059, 1066, 1365, 1964, 2112
AspLEI	GCGC	3 cut(s)	23, 345, 360
AspS9I	GGNCC	3 cut(s)	1010, 1097, 1873
AsuHPI	GGTGA	4 cut(s)	88, 283, 289, 1570
AvaII	GGWCC	3 cut(s)	1010, 1097, 1873
AxyI	CCTNAGG	1 cut(s)	45
BaeGI	GKGCMC	2 cut(s)	10, 536
BanI	GGYRCC	2 cut(s)	910, 1034
BanII	GRGCYC	1 cut(s)	546
BarI	GAAGNNNNNNTAC	4 cut(s)	850, 882, 1278, 1310
BbrPI	CACGTG	1 cut(s)	59
BbsI	GAAGAC	2 cut(s)	45, 645
Bbv12I	GWGCWC	3 cut(s)	10, 232, 546
BbvCI	CCTCAGC	2 cut(s)	716, 1554
BbvI	GCAGC	2 cut(s)	586, 1142
BccI	CCATC	8 cut(s)	83, 122, 888, 1145, 1178, 1592, 1652, 1667
BceAI	ACGGC	2 cut(s)	130, 455
BcgI	CGANNNNNNTGC	2 cut(s)	646, 680
BciT130I	CCWGG	1 cut(s)	71
BciVI	GTATCC	1 cut(s)	391
BclI	TGATCA	2 cut(s)	165, 1591
BcoDI	GTCTC	2 cut(s)	1421, 1613
BfaI	CTAG	6 cut(s)	27, 83, 386, 840, 1331, 1668
BfmI	CTRYAG	3 cut(s)	1173, 1539, 1794
BfuI	GTATCC	1 cut(s)	391
BisI	GCNGC	3 cut(s)	575, 837, 1156
BlsI	GCNGC	3 cut(s)	576, 838, 1157
Bme1390I	CCNGG	1 cut(s)	71
Bme18I	GGWCC	3 cut(s)	1010, 1097, 1873
BmgT120I	GGNCC	3 cut(s)	1010, 1097, 1873
BmiI	GGNNCC	3 cut(s)	912, 1036, 1678
BmrFI	CCNGG	1 cut(s)	71
BmrI	ACTGGG	2 cut(s)	539, 1362
BmsI	GCATC	3 cut(s)	325, 2083, 2168
BmuI	ACTGGG	2 cut(s)	539, 1362
BpiI	GAAGAC	2 cut(s)	45, 645
BpmI	CTGGAG	3 cut(s)	53, 1604, 1827
Bpu10I	CCTNAGC	4 cut(s)	716, 1163, 1554, 1992
BpuEI	CTTGAG	1 cut(s)	209
BsaAI	YACGTR	1 cut(s)	59
BsaWI	WCCGGW	1 cut(s)	1387
BsaXI	ACNNNNNCTCC	6 cut(s)	366, 396, 1319, 1349, 1418, 1448
Bsc4I	CCNNNNNNNGG	5 cut(s)	70, 610, 1044, 1423, 1619
Bse1I	ACTGG	2 cut(s)	534, 1357
Bse21I	CCTNAGG	1 cut(s)	45
Bse3DI	GCAATG	1 cut(s)	367
BseBI	CCWGG	1 cut(s)	71
BseGI	GGATG	5 cut(s)	75, 969, 1582, 1729, 2083
BseLI	CCNNNNNNNGG	5 cut(s)	70, 610, 1044, 1423, 1619
BseMI	GCAATG	1 cut(s)	367
BseNI	ACTGG	2 cut(s)	534, 1357
BseRI	GAGGAG	2 cut(s)	221, 1340
BseSI	GKGCMC	2 cut(s)	10, 536
BseXI	GCAGC	2 cut(s)	586, 1142
BsgI	GTGCAG	2 cut(s)	984, 1590
Bsh1236I	CGCG	1 cut(s)	23
BshFI	GGCC	3 cut(s)	74, 1441, 1500
BshNI	GGYRCC	2 cut(s)	910, 1034
BsiHKAI	GWGCWC	3 cut(s)	10, 232, 546
BsiSI	CCGG	2 cut(s)	330, 1388
BslFI	GGGAC	3 cut(s)	47, 1061, 1253
BslI	CCNNNNNNNGG	5 cut(s)	70, 610, 1044, 1423, 1619
BsmAI	GTCTC	2 cut(s)	1421, 1613
BsmFI	GGGAC	3 cut(s)	47, 1061, 1253
BsmI	GAATGC	1 cut(s)	1519
BsnI	GGCC	3 cut(s)	74, 1441, 1500
Bsp1286I	GDGCHC	4 cut(s)	10, 232, 536, 546
Bsp143I	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
BspACI	CCGC	2 cut(s)	836, 1989
BspANI	GGCC	3 cut(s)	74, 1441, 1500
BspFNI	CGCG	1 cut(s)	23
BspLI	GGNNCC	3 cut(s)	912, 1036, 1678
BspMAI	CTGCAG	2 cut(s)	1543, 1798
BspPI	GGATC	2 cut(s)	554, 622
BspT107I	GGYRCC	2 cut(s)	910, 1034
BsrDI	GCAATG	1 cut(s)	367
BsrI	ACTGG	2 cut(s)	534, 1357
BssMI	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
Bst2UI	CCWGG	1 cut(s)	71
Bst4CI	ACNGT	6 cut(s)	295, 403, 495, 1021, 1802, 2034
Bst6I	CTCTTC	5 cut(s)	1503, 1938, 2052, 2163, 2175
BstAPI	GCANNNNNTGC	2 cut(s)	605, 1802
BstBAI	YACGTR	1 cut(s)	59
BstC8I	GCNNGC	5 cut(s)	199, 642, 1160, 1170, 2127
BstF5I	GGATG	5 cut(s)	75, 969, 1582, 1729, 2083
BstFNI	CGCG	1 cut(s)	23
BstHHI	GCGC	3 cut(s)	23, 345, 360
BstKTI	GATC	6 cut(s)	168, 562, 617, 998, 1582, 1594
BstMAI	GTCTC	2 cut(s)	1421, 1613
BstMBI	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
BstMWI	GCNNNNNNNGC	4 cut(s)	29, 335, 605, 1802
BstNI	CCWGG	1 cut(s)	71
BstNSI	RCATGY	3 cut(s)	415, 1172, 1385
BstSCI	CCNGG	1 cut(s)	69
BstSFI	CTRYAG	3 cut(s)	1173, 1539, 1794
BstSLI	GKGCMC	2 cut(s)	10, 536
BstUI	CGCG	1 cut(s)	23
BstV1I	GCAGC	2 cut(s)	586, 1142
BstV2I	GAAGAC	2 cut(s)	45, 645
BstX2I	RGATCY	2 cut(s)	559, 614
BstYI	RGATCY	2 cut(s)	559, 614
Bsu36I	CCTNAGG	1 cut(s)	45
BsuI	GTATCC	1 cut(s)	391
BsuRI	GGCC	3 cut(s)	74, 1441, 1500
BtsCI	GGATG	5 cut(s)	75, 969, 1582, 1729, 2083
BtsIMutI	CAGTG	5 cut(s)	397, 534, 1350, 1439, 1766
Cac8I	GCNNGC	5 cut(s)	199, 642, 1160, 1170, 2127
CfoI	GCGC	3 cut(s)	23, 345, 360
Cfr13I	GGNCC	3 cut(s)	1010, 1097, 1873
CseI	GACGC	1 cut(s)	12
CviAII	CATG	9 cut(s)	183, 314, 371, 412, 605, 815, 1169, 1382, 1502
DpnI	GATC	6 cut(s)	167, 561, 616, 997, 1581, 1593
DpnII	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
DraI	TTTAAA	1 cut(s)	768
Eam1104I	CTCTTC	5 cut(s)	1503, 1938, 2052, 2163, 2175
EarI	CTCTTC	5 cut(s)	1503, 1938, 2052, 2163, 2175
Ecl136II	GAGCTC	1 cut(s)	544
Eco24I	GRGCYC	1 cut(s)	546
Eco47I	GGWCC	3 cut(s)	1010, 1097, 1873
Eco53kI	GAGCTC	1 cut(s)	544
Eco57I	CTGAAG	6 cut(s)	18, 729, 838, 1602, 1937, 2184
Eco72I	CACGTG	1 cut(s)	59
Eco81I	CCTNAGG	1 cut(s)	45
EcoICRI	GAGCTC	1 cut(s)	544
EcoRII	CCWGG	1 cut(s)	69
EcoT38I	GRGCYC	1 cut(s)	546
FaeI	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1172, 1385, 1505
FalI	AAGNNNNNCTT	2 cut(s)	563, 595
FaqI	GGGAC	3 cut(s)	47, 1061, 1253
FatI	CATG	9 cut(s)	182, 313, 370, 411, 604, 814, 1168, 1381, 1501
FbaI	TGATCA	2 cut(s)	165, 1591
Fnu4HI	GCNGC	3 cut(s)	575, 837, 1156
FokI	GGATG	5 cut(s)	62, 976, 1589, 1736, 2090
FriOI	GRGCYC	1 cut(s)	546
Fsp4HI	GCNGC	3 cut(s)	575, 837, 1156
FspBI	CTAG	6 cut(s)	27, 83, 386, 840, 1331, 1668
GlaI	GCGC	3 cut(s)	22, 344, 359
GluI	GCNGC	3 cut(s)	575, 837, 1156
GsuI	CTGGAG	3 cut(s)	53, 1604, 1827
HaeIII	GGCC	3 cut(s)	74, 1441, 1500
HapII	CCGG	2 cut(s)	330, 1388
HgaI	GACGC	1 cut(s)	12
HhaI	GCGC	3 cut(s)	23, 345, 360
Hin1II	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1172, 1385, 1505
Hin6I	GCGC	3 cut(s)	21, 343, 358
HinP1I	GCGC	3 cut(s)	21, 343, 358
HincII	GTYRAC	1 cut(s)	1141
HindII	GTYRAC	1 cut(s)	1141
HpaII	CCGG	2 cut(s)	330, 1388
HphI	GGTGA	4 cut(s)	88, 283, 289, 1570
Hpy166II	GTNNAC	3 cut(s)	8, 1141, 1762
Hpy8I	GTNNAC	3 cut(s)	8, 1141, 1762
Hpy99I	CGWCG	1 cut(s)	759
HpyCH4III	ACNGT	6 cut(s)	295, 403, 495, 1021, 1802, 2034
HpyCH4IV	ACGT	4 cut(s)	58, 176, 754, 1104
HpyF10VI	GCNNNNNNNGC	4 cut(s)	29, 335, 605, 1802
HpySE526I	ACGT	4 cut(s)	58, 176, 754, 1104
Hsp92II	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1172, 1385, 1505
HspAI	GCGC	3 cut(s)	21, 343, 358
Ksp22I	TGATCA	2 cut(s)	165, 1591
Kzo9I	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
LmnI	GCTCC	3 cut(s)	1327, 1534, 1808
Lsp1109I	GCAGC	2 cut(s)	586, 1142
LweI	GCATC	3 cut(s)	325, 2083, 2168
MaeI	CTAG	6 cut(s)	27, 83, 386, 840, 1331, 1668
MaeII	ACGT	4 cut(s)	58, 176, 754, 1104
MaeIII	GTNAC	4 cut(s)	170, 295, 309, 797
MalI	GATC	6 cut(s)	167, 561, 616, 997, 1581, 1593
MboI	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
MfeI	CAATTG	2 cut(s)	303, 480
MflI	RGATCY	2 cut(s)	559, 614
MhlI	GDGCHC	4 cut(s)	10, 232, 536, 546
MlyI	GAGTC	5 cut(s)	200, 317, 1423, 1673, 1994
MmeI	TCCRAC	1 cut(s)	133
MseI	TTAA	4 cut(s)	489, 767, 921, 1734
MspI	CCGG	2 cut(s)	330, 1388
MspR9I	CCNGG	1 cut(s)	71
MunI	CAATTG	2 cut(s)	303, 480
Mva1269I	GAATGC	1 cut(s)	1519
MvaI	CCWGG	1 cut(s)	71
MvnI	CGCG	1 cut(s)	23
MwoI	GCNNNNNNNGC	4 cut(s)	29, 335, 605, 1802
NdeII	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
NlaIII	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1172, 1385, 1505
NlaIV	GGNNCC	3 cut(s)	912, 1036, 1678
NmuCI	GTSAC	2 cut(s)	295, 309
NspI	RCATGY	3 cut(s)	415, 1172, 1385
PaeI	GCATGC	1 cut(s)	1172
PciI	ACATGT	1 cut(s)	411
PcsI	WCGNNNNNNNCGW	1 cut(s)	523
PctI	GAATGC	1 cut(s)	1519
PfeI	GAWTC	6 cut(s)	317, 935, 1217, 1637, 1646, 2102
PkrI	GCNGC	3 cut(s)	576, 838, 1157
PleI	GAGTC	5 cut(s)	199, 316, 1423, 1672, 1993
PmaCI	CACGTG	1 cut(s)	59
PmlI	CACGTG	1 cut(s)	59
PpsI	GAGTC	5 cut(s)	199, 316, 1423, 1672, 1993
Ppu21I	YACGTR	1 cut(s)	59
PscI	ACATGT	1 cut(s)	411
Psp124BI	GAGCTC	1 cut(s)	546
Psp1406I	AACGTT	1 cut(s)	1104
Psp6I	CCWGG	1 cut(s)	69
PspCI	CACGTG	1 cut(s)	59
PspGI	CCWGG	1 cut(s)	69
PspN4I	GGNNCC	3 cut(s)	912, 1036, 1678
PspPI	GGNCC	3 cut(s)	1010, 1097, 1873
PstI	CTGCAG	2 cut(s)	1543, 1798
PsuI	RGATCY	2 cut(s)	559, 614
SacI	GAGCTC	1 cut(s)	546
SaqAI	TTAA	4 cut(s)	489, 767, 921, 1734
SatI	GCNGC	3 cut(s)	575, 837, 1156
Sau3AI	GATC	6 cut(s)	165, 559, 614, 995, 1579, 1591
Sau96I	GGNCC	3 cut(s)	1010, 1097, 1873
SchI	GAGTC	5 cut(s)	200, 317, 1423, 1673, 1994
ScrFI	CCNGG	1 cut(s)	71
SduI	GDGCHC	4 cut(s)	10, 232, 536, 546
SfaNI	GCATC	3 cut(s)	325, 2083, 2168
SfcI	CTRYAG	3 cut(s)	1173, 1539, 1794
SinI	GGWCC	3 cut(s)	1010, 1097, 1873
SmlI	CTYRAG	1 cut(s)	188
SmoI	CTYRAG	1 cut(s)	188
SphI	GCATGC	1 cut(s)	1172
SsiI	CCGC	2 cut(s)	836, 1989
SspI	AATATT	2 cut(s)	807, 1732
SspMI	CTAG	6 cut(s)	27, 83, 386, 840, 1331, 1668
SstI	GAGCTC	1 cut(s)	546
StyD4I	CCNGG	1 cut(s)	69
TaaI	ACNGT	6 cut(s)	295, 403, 495, 1021, 1802, 2034
TaiI	ACGT	4 cut(s)	61, 179, 757, 1107
TaqI	TCGA	5 cut(s)	656, 827, 970, 1280, 2013
TauI	GCSGC	1 cut(s)	839
TfiI	GAWTC	6 cut(s)	317, 935, 1217, 1637, 1646, 2102
Tru1I	TTAA	4 cut(s)	489, 767, 921, 1734
Tru9I	TTAA	4 cut(s)	489, 767, 921, 1734
TscAI	CASTG	5 cut(s)	397, 541, 1357, 1439, 1773
TseFI	GTSAC	2 cut(s)	295, 309
TseI	GCWGC	2 cut(s)	574, 1155
Tsp45I	GTSAC	2 cut(s)	295, 309
TspRI	CASTG	5 cut(s)	397, 541, 1357, 1439, 1773
VneI	GTGCAC	1 cut(s)	6
VpaK11BI	GGWCC	3 cut(s)	1010, 1097, 1873
XapI	RAATTY	7 cut(s)	104, 819, 1059, 1066, 1365, 1964, 2112
XbaI	TCTAGA	1 cut(s)	1667
XceI	RCATGY	3 cut(s)	415, 1172, 1385
XspI	CTAG	6 cut(s)	27, 83, 386, 840, 1331, 1668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.