Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005877

Physical Location & Seq

Genomic Coordinates Reverse (-)

40823845 .. 40831968

Gene Structure 8124 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00114650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAAGGTGCTGTTGCCGTTAGTAAATGCCCCGATGATCAGTTACACATTAGCATGGCTTGAGTCTGCTGGCGTTGAGGAGGTTTTTGTTTTCTGCTGTGCTCACTCCAAGCAAGTGATCAGTTATTTGGAGAATTCTGAGTGGTTTTCTCAACCTAACTTCACGGTCACCACAATTGAGTCACATGATTCTGTTAGTGCCGGAGATGCTCTGCGCTTGATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTAATCAGTGGGGATACTGTGAGCAACATGTCGCTTACTCAGGTGCTTCAAGAACATAAAGAGAGAAGAAAGAAAGATAGTAATGCCGCAATGACAATTGTTATTAAACGGTCAAAGCCTTCTCAAATCATTCACCAATGTCGACTGGGCACTGATGATTGCTATATCGACATATGCTCTCCTGAAGTCCTCAGCCTTTTCACAGACAATTTTGACTATCATCATTTACGCCGTCCTTTTTTAAAGGGATTGCTTGTTGATGATATTATGGGTTACAAAATATTCACACATGAAATTCACTCAACTTATGCGGCTAGGATTGACAACTTCAGAAGCTATGACACAATCAGTAGGGACATAATTCAGAGATGGGCTTACCCATTGGTGCCAGATGTTAAGTTTTTCGGAGATTCTTCAACGAAGCTGGAAAGGCAGGGGATGTATCGAGTCTCAGGTAGGACCTGTGATATTTACAAAGGCAATCGCGCTCTGCACAGATTGGTCCTTTTACAGTCATTGGGAATGGCACCAAGATTGGGGACAACACCAAAATTTCAAATTCTGTTATTGGAGAAGGGTGTTCTATTGGACCAAAGTTTCCATAGAAGGTTCCTATATATATGGGATAATGTCACCATTGAAGATGGCTGCAAGATAAGGCATGCTATAGTATGTGATGGAGTGATAATGAAGTCTGGGGCAGTTTTGGAACCACGTGTAGTTTTGTCTTTCAAGGTAGTGATAGGACAACAATTTATTACTCCTTCATACTTAAAGGTATCTTTACTTCAACAACCAATAAAACAAGATAGTGATGAGGAGCTGGAGTATGTTGACAATAGCACTGGTAATGCAGAAATTTCTTATCTTACACATGCACTGGATATATCGAATGGGGAAATAGCGAACCAACAACAGGAGACACAGTGTTGGGCGACATCTGAGCTGGGTACTGGTGGGGCTGGTTATGCTTGGTCAATTAGTGAAGGAGGCCATGATGAAGAATGGAGGCATTCAGTTGCTCCCATTCCCACAGAGAAACTTGCTGAGGTTATACAAGCTGCAGAGGATGATCATGATGGCAGCAGTCTCCCACCTTCGGATTCTAATGATTCTGATTATGAAGAAGAGCCTAGAGATTACTCCTACTTTGAAAATGAGGTTGAAGCAACCTTCCTAAGAGCTGTGGATGAAAATATTAAAGTAGAGAATGTCGTTTTAGAAGTGAACTCACTGAGATTGGCATACAACAAGCAAACTGCAAACTGTGCTGGAGCTATGTTTTATTCAATGATGAAATTGGCATTAGAATCTCCACATAATTCAGCAGGTGAATTGGTCCAGGCTACTACGAAGGTAATTACAAAATGGAAAGGACTGCTGAAGTATTACCTATCAGACATCGATGAAGAGATAGAAGTAATAATGAAATTTGAAGATATGTGTTTGGGGTCCGCTAAGGAGTTCTCCCCTGTGTTTGATAAGATACTCTATCAATTGTATGACCACACAGTTATACGGGAAGAGGCTATTCTGAGGTGGGATGATGAAAAGAGAGATGCTGATGCATCAGATAGAATTTTTGTTAGGAGGCTGAAGATTTTATCCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0002183 GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0019899 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0051020 GO:0065007 GO:0065009 GO:0071704 GO:0097159 GO:0098772 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Hexapep Hexapep_2 NTP_transferase W2

Protein Analysis

622

Amino Acids

70.78

Weight (kDa)

5.14

Isoelectric Point (pI)

45.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTP_transferase	PF00483	2 - 120	9.5e-07	Nucleotidyl transferase
LbH_EIF2B	PF25084	291 - 337	6.4e-15	EIF2B subunit epsilon LbH domain
W2	PF02020	556 - 608	1.6e-08	eIF4-gamma/eIF5/eIF2-epsilon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005877)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34970 AT4G18300
fragaria_vesca	FvH4_2g12670 FvH4_2g12670
malus_domestica	MD00G1051200.v1.1 MD12G1232500.v1.1 MD17G1228000.v1.1
prunus_persica	Prupe.6G335900_v2.0.a1
pyrus_communis	pycom04g19200 pycom12g21490
rosa_chinensis	RchiOBHm_Chr2g0129391 RchiOBHm_Chr6g0273391
rosa_laevigata	RLG00000013621 RLG00000019076
rosa_multiflora	Rmu_sc0001171.1_g000012 Rmu_sc0005891.1_g000011
rosa_roxburghii	Rroxscaffold_2G00114650 Rroxscaffold_7G00195420
rosa_rugosa	Rorug06G0074500
rosa_samantha	Rh2AG338500 Rh2BG346600 Rh2CG326000 Rh2DG364400 Rh6AG189600 Rh6BG193000 Rh6CG192800 Rh6DG184300
rosa_wichuraiana	Rw6G016500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1574
Acc36I	ACCTGC	1 cut(s)	1574
AccB1I	GGYRCC	2 cut(s)	640, 781
AccI	GTMKAC	1 cut(s)	397
AccII	CGCG	1 cut(s)	741
AciI	CCGC	3 cut(s)	342, 566, 1710
AcsI	RAATTY	7 cut(s)	133, 549, 806, 813, 1113, 1685, 1833
AcuI	CTGAAG	3 cut(s)	459, 568, 1658
AcvI	CACGTG	1 cut(s)	971
AfaI	GTAC	1 cut(s)	1207
AfiI	CCNNNNNNNGG	3 cut(s)	791, 1171, 1354
AflIII	ACRYGT	2 cut(s)	282, 970
AjnI	CCWGG	1 cut(s)	1596
AluBI	AGCT	7 cut(s)	591, 679, 1078, 1201, 1316, 1439, 1532
AluI	AGCT	7 cut(s)	591, 679, 1078, 1201, 1316, 1439, 1532
Alw21I	GWGCWC	1 cut(s)	103
Alw26I	GTCTC	3 cut(s)	709, 1169, 1349
AoxI	GGCC	1 cut(s)	1246
ApeKI	GCWGC	3 cut(s)	903, 1316, 1338
ApoI	RAATTY	7 cut(s)	133, 549, 806, 813, 1113, 1685, 1833
AspLEI	GCGC	3 cut(s)	216, 231, 743
AspS9I	GGNCC	5 cut(s)	714, 757, 844, 1594, 1707
AsuHPI	GGTGA	4 cut(s)	160, 380, 880, 1598
AvaII	GGWCC	5 cut(s)	714, 757, 844, 1594, 1707
BaeGI	GKGCMC	1 cut(s)	407
BanI	GGYRCC	2 cut(s)	640, 781
BarI	GAAGNNNNNNTAC	2 cut(s)	1026, 1058
BbrPI	CACGTG	1 cut(s)	971
Bbv12I	GWGCWC	1 cut(s)	103
BbvCI	CCTCAGC	2 cut(s)	446, 1302
BbvI	GCAGC	3 cut(s)	890, 1303, 1350
BccI	CCATC	4 cut(s)	618, 893, 926, 1328
BceAI	ACGGC	1 cut(s)	471
BciT130I	CCWGG	1 cut(s)	1598
BciVI	GTATCC	1 cut(s)	262
BclI	TGATCA	3 cut(s)	36, 117, 1327
BcoDI	GTCTC	3 cut(s)	709, 1169, 1349
BfaI	CTAG	2 cut(s)	570, 1389
BfmI	CTRYAG	2 cut(s)	921, 1317
BfuAI	ACCTGC	1 cut(s)	1574
BfuI	GTATCC	1 cut(s)	262
BisI	GCNGC	5 cut(s)	342, 567, 904, 1317, 1339
BlsI	GCNGC	5 cut(s)	343, 568, 905, 1318, 1340
Bme1390I	CCNGG	1 cut(s)	1598
Bme18I	GGWCC	5 cut(s)	714, 757, 844, 1594, 1707
BmgT120I	GGNCC	5 cut(s)	714, 757, 844, 1594, 1707
BmiI	GGNNCC	5 cut(s)	642, 783, 866, 966, 1708
BmrFI	CCNGG	1 cut(s)	1598
BmrI	ACTGGG	1 cut(s)	410
BmsI	GCATC	4 cut(s)	196, 1804, 1810, 1832
BmuI	ACTGGG	1 cut(s)	410
BpmI	CTGGAG	2 cut(s)	1100, 1548
Bpu10I	CCTNAGC	3 cut(s)	446, 1302, 1713
BpuEI	CTTGAG	1 cut(s)	80
Bsa29I	ATCGAT	1 cut(s)	1659
BsaAI	YACGTR	1 cut(s)	971
BsaXI	ACNNNNNCTCC	6 cut(s)	237, 267, 1067, 1097, 1166, 1196
Bsc4I	CCNNNNNNNGG	3 cut(s)	791, 1171, 1354
Bse1I	ACTGG	4 cut(s)	405, 1105, 1140, 1213
Bse3DI	GCAATG	2 cut(s)	238, 351
BseBI	CCWGG	1 cut(s)	1598
BseCI	ATCGAT	1 cut(s)	1659
BseGI	GGATG	4 cut(s)	699, 1330, 1450, 1804
BseLI	CCNNNNNNNGG	3 cut(s)	791, 1171, 1354
BseMI	GCAATG	2 cut(s)	238, 351
BseMII	CTCAG	8 cut(s)	129, 308, 460, 720, 1188, 1293, 1481, 1781
BseNI	ACTGG	4 cut(s)	405, 1105, 1140, 1213
BseRI	GAGGAG	2 cut(s)	92, 1088
BseSI	GKGCMC	1 cut(s)	407
BseXI	GCAGC	3 cut(s)	890, 1303, 1350
BseYI	CCCAGC	1 cut(s)	1201
BsgI	GTGCAG	1 cut(s)	731
Bsh1236I	CGCG	1 cut(s)	741
BshFI	GGCC	1 cut(s)	1248
BshNI	GGYRCC	2 cut(s)	640, 781
BshVI	ATCGAT	1 cut(s)	1659
BsiHKAI	GWGCWC	1 cut(s)	103
BsiSI	CCGG	1 cut(s)	201
BslFI	GGGAC	2 cut(s)	623, 808
BslI	CCNNNNNNNGG	3 cut(s)	791, 1171, 1354
BsmAI	GTCTC	3 cut(s)	709, 1169, 1349
BsmFI	GGGAC	2 cut(s)	623, 808
BsmI	GAATGC	1 cut(s)	1267
BsnI	GGCC	1 cut(s)	1248
Bsp1286I	GDGCHC	2 cut(s)	103, 407
Bsp143I	GATC	3 cut(s)	36, 117, 1327
BspACI	CCGC	3 cut(s)	342, 566, 1710
BspANI	GGCC	1 cut(s)	1248
BspCNI	CTCAG	8 cut(s)	130, 307, 459, 719, 1189, 1294, 1482, 1782
BspDI	ATCGAT	1 cut(s)	1659
BspFNI	CGCG	1 cut(s)	741
BspHI	TCATGA	1 cut(s)	1330
BspLI	GGNNCC	5 cut(s)	642, 783, 866, 966, 1708
BspMAI	CTGCAG	1 cut(s)	1321
BspMI	ACCTGC	1 cut(s)	1574
BspQI	GCTCTTC	1 cut(s)	1377
BspT107I	GGYRCC	2 cut(s)	640, 781
BsrDI	GCAATG	2 cut(s)	238, 351
BsrI	ACTGG	4 cut(s)	405, 1105, 1140, 1213
BssMI	GATC	3 cut(s)	36, 117, 1327
Bst2UI	CCWGG	1 cut(s)	1598
Bst4CI	ACNGT	7 cut(s)	166, 274, 366, 768, 1182, 1523, 1768
Bst6I	CTCTTC	3 cut(s)	1377, 1659, 1773
BstAPI	GCANNNNNTGC	1 cut(s)	1523
BstBAI	YACGTR	1 cut(s)	971
BstC8I	GCNNGC	2 cut(s)	70, 918
BstEII	GGTNACC	1 cut(s)	166
BstF5I	GGATG	4 cut(s)	699, 1330, 1450, 1804
BstFNI	CGCG	1 cut(s)	741
BstHHI	GCGC	3 cut(s)	216, 231, 743
BstKTI	GATC	3 cut(s)	39, 120, 1330
BstMAI	GTCTC	3 cut(s)	709, 1169, 1349
BstMBI	GATC	3 cut(s)	36, 117, 1327
BstMWI	GCNNNNNNNGC	4 cut(s)	206, 685, 1223, 1523
BstNI	CCWGG	1 cut(s)	1598
BstNSI	RCATGY	3 cut(s)	286, 920, 1133
BstPI	GGTNACC	1 cut(s)	166
BstSCI	CCNGG	1 cut(s)	1596
BstSFI	CTRYAG	2 cut(s)	921, 1317
BstSLI	GKGCMC	1 cut(s)	407
BstUI	CGCG	1 cut(s)	741
BstV1I	GCAGC	3 cut(s)	890, 1303, 1350
Bsu15I	ATCGAT	1 cut(s)	1659
BsuI	GTATCC	1 cut(s)	262
BsuRI	GGCC	1 cut(s)	1248
BsuTUI	ATCGAT	1 cut(s)	1659
BtsCI	GGATG	4 cut(s)	699, 1330, 1450, 1804
BtsIMutI	CAGTG	6 cut(s)	268, 405, 1098, 1133, 1187, 1487
BveI	ACCTGC	1 cut(s)	1574
Cac8I	GCNNGC	2 cut(s)	70, 918
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	3 cut(s)	216, 231, 743
Cfr13I	GGNCC	5 cut(s)	714, 757, 844, 1594, 1707
ClaI	ATCGAT	1 cut(s)	1659
Csp6I	GTAC	1 cut(s)	1206
CviAII	CATG	9 cut(s)	54, 185, 242, 283, 545, 917, 1130, 1250, 1331
CviQI	GTAC	1 cut(s)	1206
DpnI	GATC	3 cut(s)	38, 119, 1329
DpnII	GATC	3 cut(s)	36, 117, 1327
DraI	TTTAAA	1 cut(s)	498
Eam1104I	CTCTTC	3 cut(s)	1377, 1659, 1773
EarI	CTCTTC	3 cut(s)	1377, 1659, 1773
Eco47I	GGWCC	5 cut(s)	714, 757, 844, 1594, 1707
Eco57I	CTGAAG	3 cut(s)	459, 568, 1658
Eco72I	CACGTG	1 cut(s)	971
Eco91I	GGTNACC	1 cut(s)	166
EcoO109I	RGGNCCY	1 cut(s)	714
EcoO65I	GGTNACC	1 cut(s)	166
EcoRI	GAATTC	1 cut(s)	133
EcoRII	CCWGG	1 cut(s)	1596
EcoT22I	ATGCAT	1 cut(s)	1825
FaeI	CATG	9 cut(s)	57, 188, 245, 286, 548, 920, 1133, 1253, 1334
FaqI	GGGAC	2 cut(s)	623, 808
FatI	CATG	9 cut(s)	53, 184, 241, 282, 544, 916, 1129, 1249, 1330
FauNDI	CATATG	1 cut(s)	428
FbaI	TGATCA	3 cut(s)	36, 117, 1327
FblI	GTMKAC	1 cut(s)	397
Fnu4HI	GCNGC	5 cut(s)	342, 567, 904, 1317, 1339
FokI	GGATG	4 cut(s)	706, 1337, 1457, 1811
Fsp4HI	GCNGC	5 cut(s)	342, 567, 904, 1317, 1339
FspBI	CTAG	2 cut(s)	570, 1389
GlaI	GCGC	3 cut(s)	215, 230, 742
GluI	GCNGC	5 cut(s)	342, 567, 904, 1317, 1339
GsaI	CCCAGC	1 cut(s)	1205
GsuI	CTGGAG	2 cut(s)	1100, 1548
HaeIII	GGCC	1 cut(s)	1248
HapII	CCGG	1 cut(s)	201
HhaI	GCGC	3 cut(s)	216, 231, 743
Hin1II	CATG	9 cut(s)	57, 188, 245, 286, 548, 920, 1133, 1253, 1334
Hin6I	GCGC	3 cut(s)	214, 229, 741
HinP1I	GCGC	3 cut(s)	214, 229, 741
HincII	GTYRAC	2 cut(s)	398, 1090
HindII	GTYRAC	2 cut(s)	398, 1090
HinfI	GANTC	8 cut(s)	62, 179, 188, 665, 702, 1358, 1367, 1565
HpaII	CCGG	1 cut(s)	201
HphI	GGTGA	4 cut(s)	160, 380, 880, 1598
Hpy166II	GTNNAC	3 cut(s)	398, 1090, 1483
Hpy188III	TCNNGA	3 cut(s)	305, 437, 1331
Hpy8I	GTNNAC	3 cut(s)	398, 1090, 1483
HpyAV	CCTTC	8 cut(s)	384, 823, 855, 1029, 1235, 1362, 1438, 1603
HpyCH4III	ACNGT	7 cut(s)	166, 274, 366, 768, 1182, 1523, 1768
HpyCH4IV	ACGT	1 cut(s)	970
HpyCH4V	TGCA	7 cut(s)	748, 906, 1109, 1133, 1319, 1517, 1823
HpyF10VI	GCNNNNNNNGC	4 cut(s)	206, 685, 1223, 1523
HpySE526I	ACGT	1 cut(s)	970
Hsp92II	CATG	9 cut(s)	57, 188, 245, 286, 548, 920, 1133, 1253, 1334
HspAI	GCGC	3 cut(s)	214, 229, 741
Ksp22I	TGATCA	3 cut(s)	36, 117, 1327
Kzo9I	GATC	3 cut(s)	36, 117, 1327
LguI	GCTCTTC	1 cut(s)	1377
LmnI	GCTCC	3 cut(s)	1075, 1282, 1529
Lsp1109I	GCAGC	3 cut(s)	890, 1303, 1350
LweI	GCATC	4 cut(s)	196, 1804, 1810, 1832
MaeI	CTAG	2 cut(s)	570, 1389
MaeII	ACGT	1 cut(s)	970
MaeIII	GTNAC	5 cut(s)	41, 166, 180, 527, 886
MalI	GATC	3 cut(s)	38, 119, 1329
MboI	GATC	3 cut(s)	36, 117, 1327
MfeI	CAATTG	3 cut(s)	174, 351, 1751
MhlI	GDGCHC	2 cut(s)	103, 407
MlyI	GAGTC	3 cut(s)	71, 188, 711
Mph1103I	ATGCAT	1 cut(s)	1825
MseI	TTAA	5 cut(s)	360, 497, 651, 1028, 1455
MslI	CAYNNNNRTG	1 cut(s)	52
MspI	CCGG	1 cut(s)	201
MspR9I	CCNGG	1 cut(s)	1598
MunI	CAATTG	3 cut(s)	174, 351, 1751
Mva1269I	GAATGC	1 cut(s)	1267
MvaI	CCWGG	1 cut(s)	1598
MvnI	CGCG	1 cut(s)	741
MwoI	GCNNNNNNNGC	4 cut(s)	206, 685, 1223, 1523
NdeI	CATATG	1 cut(s)	428
NdeII	GATC	3 cut(s)	36, 117, 1327
NlaIII	CATG	9 cut(s)	57, 188, 245, 286, 548, 920, 1133, 1253, 1334
NlaIV	GGNNCC	5 cut(s)	642, 783, 866, 966, 1708
NmuCI	GTSAC	3 cut(s)	166, 180, 886
NsiI	ATGCAT	1 cut(s)	1825
NspI	RCATGY	3 cut(s)	286, 920, 1133
PaeI	GCATGC	1 cut(s)	920
PagI	TCATGA	1 cut(s)	1330
PaqCI	CACCTGC	1 cut(s)	1574
PciI	ACATGT	1 cut(s)	282
PciSI	GCTCTTC	1 cut(s)	1377
PctI	GAATGC	1 cut(s)	1267
PfeI	GAWTC	5 cut(s)	188, 665, 1358, 1367, 1565
PkrI	GCNGC	5 cut(s)	343, 568, 905, 1318, 1340
PleI	GAGTC	3 cut(s)	70, 187, 710
PmaCI	CACGTG	1 cut(s)	971
PmlI	CACGTG	1 cut(s)	971
PpsI	GAGTC	3 cut(s)	70, 187, 710
Ppu21I	YACGTR	1 cut(s)	971
PpuMI	RGGWCCY	1 cut(s)	714
PscI	ACATGT	1 cut(s)	282
Psp5II	RGGWCCY	1 cut(s)	714
Psp6I	CCWGG	1 cut(s)	1596
PspCI	CACGTG	1 cut(s)	971
PspEI	GGTNACC	1 cut(s)	166
PspFI	CCCAGC	1 cut(s)	1201
PspGI	CCWGG	1 cut(s)	1596
PspN4I	GGNNCC	5 cut(s)	642, 783, 866, 966, 1708
PspPI	GGNCC	5 cut(s)	714, 757, 844, 1594, 1707
PspPPI	RGGWCCY	1 cut(s)	714
PstI	CTGCAG	1 cut(s)	1321
RsaI	GTAC	1 cut(s)	1207
RsaNI	GTAC	1 cut(s)	1206
RseI	CAYNNNNRTG	1 cut(s)	52
SalI	GTCGAC	1 cut(s)	396
SapI	GCTCTTC	1 cut(s)	1377
SaqAI	TTAA	5 cut(s)	360, 497, 651, 1028, 1455
SatI	GCNGC	5 cut(s)	342, 567, 904, 1317, 1339
Sau3AI	GATC	3 cut(s)	36, 117, 1327
Sau96I	GGNCC	5 cut(s)	714, 757, 844, 1594, 1707
SchI	GAGTC	3 cut(s)	71, 188, 711
ScrFI	CCNGG	1 cut(s)	1598
SduI	GDGCHC	2 cut(s)	103, 407
SfaNI	GCATC	4 cut(s)	196, 1804, 1810, 1832
SfcI	CTRYAG	2 cut(s)	921, 1317
SinI	GGWCC	5 cut(s)	714, 757, 844, 1594, 1707
SmiMI	CAYNNNNRTG	1 cut(s)	52
SmlI	CTYRAG	1 cut(s)	59
SmoI	CTYRAG	1 cut(s)	59
SphI	GCATGC	1 cut(s)	920
SsiI	CCGC	3 cut(s)	342, 566, 1710
SspI	AATATT	2 cut(s)	537, 1453
SspMI	CTAG	2 cut(s)	570, 1389
StyD4I	CCNGG	1 cut(s)	1596
TaaI	ACNGT	7 cut(s)	166, 274, 366, 768, 1182, 1523, 1768
TaiI	ACGT	1 cut(s)	973
TaqI	TCGA	5 cut(s)	397, 423, 700, 1145, 1659
TauI	GCSGC	2 cut(s)	344, 569
TfiI	GAWTC	5 cut(s)	188, 665, 1358, 1367, 1565
Tru1I	TTAA	5 cut(s)	360, 497, 651, 1028, 1455
Tru9I	TTAA	5 cut(s)	360, 497, 651, 1028, 1455
TscAI	CASTG	6 cut(s)	268, 412, 1105, 1140, 1187, 1494
TseFI	GTSAC	3 cut(s)	166, 180, 886
TseI	GCWGC	3 cut(s)	903, 1316, 1338
Tsp45I	GTSAC	3 cut(s)	166, 180, 886
TspRI	CASTG	6 cut(s)	268, 412, 1105, 1140, 1187, 1494
VpaK11BI	GGWCC	5 cut(s)	714, 757, 844, 1594, 1707
XapI	RAATTY	7 cut(s)	133, 549, 806, 813, 1113, 1685, 1833
XceI	RCATGY	3 cut(s)	286, 920, 1133
XmiI	GTMKAC	1 cut(s)	397
XspI	CTAG	2 cut(s)	570, 1389
Zsp2I	ATGCAT	1 cut(s)	1825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.