Rmu_sc0001171.1_g000012

Translation initiation factor eIF-2B subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001171.1
Physical Location & Seq
Forward (+)
41950 .. 51537
9588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001171.1_g000012.1.cds

Sequence Viewer

Length: 1815 bp
atgggggcacaaaagaaaggcgcgtctagggcttcagaggaccctgaggaactggcccgtctcccactccaagccatcctcttagccgatagtttcaccaccaaattccgacccatcacccttgaacgccccaaagtgctgttgccgttagtaaatgccccgatgatcagttacacattagcatggcttgagtctgctggcgttgaggaggtttttgttgtctgctgtgctcactccaagcaagtgatcagttatttggagaattctgagtggttttctcaaccaaacttcacggtcaccacaattgagtcacataattctgttagtgccggagatgctctgcgcgtgatatatgagcgcaatgtggattgctacatcgacatatgctctcctgaagtcctcagccttttcacagacaattttgactatcaccatttacgctgtcattttttaaagggattgcttgttgatgatattatgggttacaaaatattcacacatgaaattcactcgacttatgcggctaggattgacaacttcagaagctatgacacaatcagtagggacataattcagagatgggcttacccattggtgccagatgttaagtttttcagagattcttcaacgaagctggaaagacaggggatgtatctagtcacagaactagggcaatcgcgctctgcacagattggtccttttacagtcattgggaatggcaccaagattggggacaacaccaaaatttcaaattctgttattggagatgggtgttctattggaccaaacgtttccatagaaggttcctatatatgggataatgtcaccattgaagatggctgcaagataaggcatgctatagtatgtgatggagtgataatgaagtctggggcagttttggaaccgggtgtagttttgtctttcaaggtagtgataggacaacaatttattgctccttcatacttaatggtatctttactccaacaaccaataaagcaaaatagtgatgagaagctagagtatgttgacaataccactgctcttacacatgcactggatatatcgaatggggaaatagcgaaccaacaacaggagacacagtgttgggcgacatctgagcttggtattggtggggctggttatgtttggtcaatttgtgaaggaggccatgatgaaggatggaggcattcagttgctcccattcccacagagaaacttgctgaggttatacaagatgcagaggatgatcatgatggcagtctcccaacttcagattctgattctgatgaagagcctagagacgactcctactttgaaaatgaggttgaagcaaccttcctaagagctgtggatgaaaatattaaagtagagaatgtcgttttagaagtgagctcactgagattgtcatacaacaagcaaactgcaaactgtgctggagctatattttattcaatgatgaaattggcattagaatctccacataattcagcaggtgaattggtccaagctactatgaaggtaattacaaaatggaaaggactgctgaagtattacctatcagacatcgatgaagagatagaagtaataatgaaatttgaagatatgtgtttggagtccgctaaggagttctcccctgtgtttgataagatactctatcaattgtatgaccacacaattatacgggaagaggctattctaaggtgggatgatgaaaagaaagatgctgatgcatcagatagaatttttgttaggcaggctgaagattttatccaatggttgagagaggcatctgaagaagaggatgaggaagagtag

Protein Analysis

604

Amino Acids

67.94

Weight (kDa)

4.59

Isoelectric Point (pI)

44.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1481
Acc36I ACCTGC 1 cut(s) 1481
AccB1I GGYRCC 2 cut(s) 595, 719
AccII CGCG 3 cut(s) 23, 345, 679
AciI CCGC 2 cut(s) 521, 1617
AclI AACGTT 1 cut(s) 789
AcsI RAATTY 7 cut(s) 104, 262, 504, 744, 751, 1592, 1740
AcuI CTGAAG 7 cut(s) 18, 414, 523, 1254, 1565, 1779, 1812
AfiI CCNNNNNNNGG 3 cut(s) 729, 813, 1090
AgsI TTSAA 9 cut(s) 125, 627, 750, 833, 925, 1316, 1328, 1452, 1598
AjuI GAANNNNNNNTTGG 2 cut(s) 1258, 1290
AluBI AGCT 8 cut(s) 546, 634, 1015, 1120, 1346, 1392, 1439, 1508
AluI AGCT 8 cut(s) 546, 634, 1015, 1120, 1346, 1392, 1439, 1508
Alw21I GWGCWC 2 cut(s) 232, 1394
Alw26I GTCTC 4 cut(s) 65, 1088, 1265, 1293
AlwNI CAGNNNCTG 1 cut(s) 1277
AoxI GGCC 2 cut(s) 54, 1165
ApeKI GCWGC 1 cut(s) 840
ApoI RAATTY 7 cut(s) 104, 262, 504, 744, 751, 1592, 1740
ArsI GACNNNNNNTTYG 2 cut(s) 1295, 1327
AspLEI GCGC 4 cut(s) 23, 345, 360, 681
AspS9I GGNCC 5 cut(s) 40, 55, 695, 782, 1501
AsuC2I CCSGG 1 cut(s) 906
AsuHPI GGTGA 6 cut(s) 88, 109, 289, 422, 817, 1505
AvaII GGWCC 4 cut(s) 40, 695, 782, 1501
AxyI CCTNAGG 1 cut(s) 45
BaeGI GKGCMC 1 cut(s) 10
BanI GGYRCC 2 cut(s) 595, 719
BanII GRGCYC 1 cut(s) 1394
Bbv12I GWGCWC 2 cut(s) 232, 1394
BbvCI CCTCAGC 2 cut(s) 401, 1221
BbvI GCAGC 1 cut(s) 827
BccI CCATC 8 cut(s) 83, 122, 573, 761, 830, 863, 1173, 1247
BceAI ACGGC 1 cut(s) 130
BclI TGATCA 3 cut(s) 165, 246, 1246
BcnI CCSGG 1 cut(s) 906
BcoDI GTCTC 4 cut(s) 65, 1088, 1265, 1293
BfaI CTAG 6 cut(s) 27, 525, 656, 668, 1016, 1296
BfmI CTRYAG 1 cut(s) 858
BfuAI ACCTGC 1 cut(s) 1481
BisI GCNGC 2 cut(s) 522, 841
BlsI GCNGC 2 cut(s) 523, 842
Bme1390I CCNGG 1 cut(s) 906
Bme18I GGWCC 4 cut(s) 40, 695, 782, 1501
BmgT120I GGNCC 5 cut(s) 40, 55, 695, 782, 1501
BmiI GGNNCC 5 cut(s) 42, 597, 721, 805, 903
BmrFI CCNGG 1 cut(s) 906
BmsI GCATC 6 cut(s) 325, 1225, 1711, 1717, 1739, 1796
BpmI CTGGAG 1 cut(s) 1455
Bpu10I CCTNAGC 3 cut(s) 401, 1221, 1620
BpuEI CTTGAG 1 cut(s) 209
BpuMI CCSGG 1 cut(s) 906
Bsa29I ATCGAT 1 cut(s) 1566
BsaXI ACNNNNNCTCC 2 cut(s) 1085, 1115
Bsc4I CCNNNNNNNGG 3 cut(s) 729, 813, 1090
Bse1I ACTGG 2 cut(s) 57, 1059
Bse21I CCTNAGG 1 cut(s) 45
Bse3DI GCAATG 1 cut(s) 367
BseCI ATCGAT 1 cut(s) 1566
BseGI GGATG 7 cut(s) 75, 654, 1184, 1249, 1357, 1711, 1807
BseLI CCNNNNNNNGG 3 cut(s) 729, 813, 1090
BseMI GCAATG 1 cut(s) 367
BseMII CTCAG 6 cut(s) 36, 258, 415, 1107, 1212, 1388
BseNI ACTGG 2 cut(s) 57, 1059
BseRI GAGGAG 1 cut(s) 221
BseSI GKGCMC 1 cut(s) 10
BseXI GCAGC 1 cut(s) 827
BsgI GTGCAG 1 cut(s) 669
Bsh1236I CGCG 3 cut(s) 23, 345, 679
BshFI GGCC 2 cut(s) 56, 1167
BshNI GGYRCC 2 cut(s) 595, 719
BshVI ATCGAT 1 cut(s) 1566
BsiHKAI GWGCWC 2 cut(s) 232, 1394
BsiSI CCGG 2 cut(s) 330, 905
BslFI GGGAC 2 cut(s) 578, 746
BslI CCNNNNNNNGG 3 cut(s) 729, 813, 1090
BsmAI GTCTC 4 cut(s) 65, 1088, 1265, 1293
BsmBI CGTCTC 2 cut(s) 65, 1293
BsmFI GGGAC 2 cut(s) 578, 746
BsmI GAATGC 1 cut(s) 1186
BsnI GGCC 2 cut(s) 56, 1167
Bsp1286I GDGCHC 3 cut(s) 10, 232, 1394
Bsp143I GATC 3 cut(s) 165, 246, 1246
BspACI CCGC 2 cut(s) 521, 1617
BspANI GGCC 2 cut(s) 56, 1167
BspCNI CTCAG 6 cut(s) 37, 259, 414, 1108, 1213, 1389
BspDI ATCGAT 1 cut(s) 1566
BspFNI CGCG 3 cut(s) 23, 345, 679
BspHI TCATGA 1 cut(s) 1249
BspLI GGNNCC 5 cut(s) 42, 597, 721, 805, 903
BspMI ACCTGC 1 cut(s) 1481
BspQI GCTCTTC 1 cut(s) 1284
BspT107I GGYRCC 2 cut(s) 595, 719
BsrDI GCAATG 1 cut(s) 367
BsrI ACTGG 2 cut(s) 57, 1059
BssMI GATC 3 cut(s) 165, 246, 1246
Bst4CI ACNGT 4 cut(s) 295, 706, 1101, 1430
Bst6I CTCTTC 5 cut(s) 1284, 1566, 1680, 1791, 1803
BstAPI GCANNNNNTGC 1 cut(s) 1430
BstC8I GCNNGC 3 cut(s) 199, 855, 1755
BstEII GGTNACC 1 cut(s) 295
BstF5I GGATG 7 cut(s) 75, 654, 1184, 1249, 1357, 1711, 1807
BstFNI CGCG 3 cut(s) 23, 345, 679
BstHHI GCGC 4 cut(s) 23, 345, 360, 681
BstKTI GATC 3 cut(s) 168, 249, 1249
BstMAI GTCTC 4 cut(s) 65, 1088, 1265, 1293
BstMBI GATC 3 cut(s) 165, 246, 1246
BstMWI GCNNNNNNNGC 3 cut(s) 29, 335, 1430
BstNSI RCATGY 2 cut(s) 857, 1052
BstPI GGTNACC 1 cut(s) 295
BstSCI CCNGG 1 cut(s) 904
BstSFI CTRYAG 1 cut(s) 858
BstSLI GKGCMC 1 cut(s) 10
BstUI CGCG 3 cut(s) 23, 345, 679
BstV1I GCAGC 1 cut(s) 827
Bsu15I ATCGAT 1 cut(s) 1566
Bsu36I CCTNAGG 1 cut(s) 45
BsuRI GGCC 2 cut(s) 56, 1167
BsuTUI ATCGAT 1 cut(s) 1566
BtsCI GGATG 7 cut(s) 75, 654, 1184, 1249, 1357, 1711, 1807
BtsI GCAGTG 1 cut(s) 1035
BtsIMutI CAGTG 4 cut(s) 1035, 1052, 1106, 1394
BveI ACCTGC 1 cut(s) 1481
Cac8I GCNNGC 3 cut(s) 199, 855, 1755
CaiI CAGNNNCTG 1 cut(s) 1277
CciI TCATGA 1 cut(s) 1249
CfoI GCGC 4 cut(s) 23, 345, 360, 681
Cfr13I GGNCC 5 cut(s) 40, 55, 695, 782, 1501
ClaI ATCGAT 1 cut(s) 1566
CseI GACGC 1 cut(s) 12
CviAII CATG 6 cut(s) 183, 500, 854, 1049, 1169, 1250
DpnI GATC 3 cut(s) 167, 248, 1248
DpnII GATC 3 cut(s) 165, 246, 1246
DraI TTTAAA 1 cut(s) 453
Eam1104I CTCTTC 5 cut(s) 1284, 1566, 1680, 1791, 1803
EarI CTCTTC 5 cut(s) 1284, 1566, 1680, 1791, 1803
Ecl136II GAGCTC 1 cut(s) 1392
Eco24I GRGCYC 1 cut(s) 1394
Eco47I GGWCC 4 cut(s) 40, 695, 782, 1501
Eco53kI GAGCTC 1 cut(s) 1392
Eco57I CTGAAG 7 cut(s) 18, 414, 523, 1254, 1565, 1779, 1812
Eco81I CCTNAGG 1 cut(s) 45
Eco91I GGTNACC 1 cut(s) 295
EcoICRI GAGCTC 1 cut(s) 1392
EcoO109I RGGNCCY 1 cut(s) 40
EcoO65I GGTNACC 1 cut(s) 295
EcoRI GAATTC 1 cut(s) 262
EcoT22I ATGCAT 1 cut(s) 1732
EcoT38I GRGCYC 1 cut(s) 1394
Esp3I CGTCTC 2 cut(s) 65, 1293
FaeI CATG 6 cut(s) 186, 503, 857, 1052, 1172, 1253
FaqI GGGAC 2 cut(s) 578, 746
FatI CATG 6 cut(s) 182, 499, 853, 1048, 1168, 1249
FauNDI CATATG 1 cut(s) 383
FbaI TGATCA 3 cut(s) 165, 246, 1246
Fnu4HI GCNGC 2 cut(s) 522, 841
FokI GGATG 6 cut(s) 62, 661, 1191, 1256, 1364, 1718
FriOI GRGCYC 1 cut(s) 1394
Fsp4HI GCNGC 2 cut(s) 522, 841
FspBI CTAG 6 cut(s) 27, 525, 656, 668, 1016, 1296
GlaI GCGC 4 cut(s) 22, 344, 359, 680
GluI GCNGC 2 cut(s) 522, 841
GsuI CTGGAG 1 cut(s) 1455
HaeIII GGCC 2 cut(s) 56, 1167
HapII CCGG 2 cut(s) 330, 905
HgaI GACGC 1 cut(s) 12
HhaI GCGC 4 cut(s) 23, 345, 360, 681
Hin1II CATG 6 cut(s) 186, 503, 857, 1052, 1172, 1253
Hin6I GCGC 4 cut(s) 21, 343, 358, 679
HinP1I GCGC 4 cut(s) 21, 343, 358, 679
HincII GTYRAC 1 cut(s) 1027
HindII GTYRAC 1 cut(s) 1027
HinfI GANTC 8 cut(s) 191, 308, 620, 1274, 1280, 1304, 1472, 1613
HpaII CCGG 2 cut(s) 330, 905
HphI GGTGA 6 cut(s) 88, 109, 289, 422, 817, 1505
Hpy166II GTNNAC 1 cut(s) 1027
Hpy188III TCNNGA 2 cut(s) 392, 1250
Hpy8I GTNNAC 1 cut(s) 1027
HpyAV CCTTC 6 cut(s) 794, 966, 1154, 1169, 1345, 1510
HpyCH4III ACNGT 4 cut(s) 295, 706, 1101, 1430
HpyCH4IV ACGT 1 cut(s) 789
HpyCH4V TGCA 6 cut(s) 686, 843, 1052, 1238, 1424, 1730
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 335, 1430
HpySE526I ACGT 1 cut(s) 789
Hsp92II CATG 6 cut(s) 186, 503, 857, 1052, 1172, 1253
HspAI GCGC 4 cut(s) 21, 343, 358, 679
Ksp22I TGATCA 3 cut(s) 165, 246, 1246
Kzo9I GATC 3 cut(s) 165, 246, 1246
LguI GCTCTTC 1 cut(s) 1284
LmnI GCTCC 3 cut(s) 958, 1201, 1436
Lsp1109I GCAGC 1 cut(s) 827
LweI GCATC 6 cut(s) 325, 1225, 1711, 1717, 1739, 1796
MaeI CTAG 6 cut(s) 27, 525, 656, 668, 1016, 1296
MaeII ACGT 1 cut(s) 789
MaeIII GTNAC 6 cut(s) 170, 295, 309, 482, 658, 823
MalI GATC 3 cut(s) 167, 248, 1248
MboI GATC 3 cut(s) 165, 246, 1246
MboII GAAGA 9 cut(s) 615, 845, 1301, 1583, 1610, 1697, 1772, 1805, 1808
MfeI CAATTG 2 cut(s) 303, 1658
MhlI GDGCHC 3 cut(s) 10, 232, 1394
MlyI GAGTC 4 cut(s) 200, 317, 1298, 1622
MmeI TCCRAC 2 cut(s) 133, 1006
Mph1103I ATGCAT 1 cut(s) 1732
MseI TTAA 4 cut(s) 452, 606, 965, 1362
MslI CAYNNNNRTG 1 cut(s) 181
MspI CCGG 2 cut(s) 330, 905
MspR9I CCNGG 1 cut(s) 906
MunI CAATTG 2 cut(s) 303, 1658
Mva1269I GAATGC 1 cut(s) 1186
MvnI CGCG 3 cut(s) 23, 345, 679
MwoI GCNNNNNNNGC 3 cut(s) 29, 335, 1430
NciI CCSGG 1 cut(s) 906
NdeI CATATG 1 cut(s) 383
NdeII GATC 3 cut(s) 165, 246, 1246
NlaIII CATG 6 cut(s) 186, 503, 857, 1052, 1172, 1253
NlaIV GGNNCC 5 cut(s) 42, 597, 721, 805, 903
NmuCI GTSAC 4 cut(s) 295, 309, 658, 823
NsiI ATGCAT 1 cut(s) 1732
NspI RCATGY 2 cut(s) 857, 1052
PaeI GCATGC 1 cut(s) 857
PagI TCATGA 1 cut(s) 1249
PaqCI CACCTGC 1 cut(s) 1481
PciSI GCTCTTC 1 cut(s) 1284
PctI GAATGC 1 cut(s) 1186
PfeI GAWTC 4 cut(s) 620, 1274, 1280, 1472
PkrI GCNGC 2 cut(s) 523, 842
PleI GAGTC 4 cut(s) 199, 316, 1298, 1621
PpsI GAGTC 4 cut(s) 199, 316, 1298, 1621
PpuMI RGGWCCY 1 cut(s) 40
Psp124BI GAGCTC 1 cut(s) 1394
Psp1406I AACGTT 1 cut(s) 789
Psp5II RGGWCCY 1 cut(s) 40
PspEI GGTNACC 1 cut(s) 295
PspN4I GGNNCC 5 cut(s) 42, 597, 721, 805, 903
PspPI GGNCC 5 cut(s) 40, 55, 695, 782, 1501
PspPPI RGGWCCY 1 cut(s) 40
PstNI CAGNNNCTG 1 cut(s) 1277
RseI CAYNNNNRTG 1 cut(s) 181
SacI GAGCTC 1 cut(s) 1394
SapI GCTCTTC 1 cut(s) 1284
SaqAI TTAA 4 cut(s) 452, 606, 965, 1362
SatI GCNGC 2 cut(s) 522, 841
Sau3AI GATC 3 cut(s) 165, 246, 1246
Sau96I GGNCC 5 cut(s) 40, 55, 695, 782, 1501
SchI GAGTC 4 cut(s) 200, 317, 1298, 1622
ScrFI CCNGG 1 cut(s) 906
SduI GDGCHC 3 cut(s) 10, 232, 1394
SfaNI GCATC 6 cut(s) 325, 1225, 1711, 1717, 1739, 1796
SfcI CTRYAG 1 cut(s) 858
SinI GGWCC 4 cut(s) 40, 695, 782, 1501
SmiMI CAYNNNNRTG 1 cut(s) 181
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
SphI GCATGC 1 cut(s) 857
SsiI CCGC 2 cut(s) 521, 1617
SspI AATATT 2 cut(s) 492, 1360
SspMI CTAG 6 cut(s) 27, 525, 656, 668, 1016, 1296
SstI GAGCTC 1 cut(s) 1394
StyD4I CCNGG 1 cut(s) 904
TaaI ACNGT 4 cut(s) 295, 706, 1101, 1430
TaiI ACGT 1 cut(s) 792
TaqI TCGA 4 cut(s) 378, 512, 1064, 1566
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 4 cut(s) 620, 1274, 1280, 1472
Tru1I TTAA 4 cut(s) 452, 606, 965, 1362
Tru9I TTAA 4 cut(s) 452, 606, 965, 1362
TscAI CASTG 4 cut(s) 1042, 1059, 1106, 1401
TseFI GTSAC 4 cut(s) 295, 309, 658, 823
TseI GCWGC 1 cut(s) 840
Tsp45I GTSAC 4 cut(s) 295, 309, 658, 823
TspRI CASTG 4 cut(s) 1042, 1059, 1106, 1401
VpaK11BI GGWCC 4 cut(s) 40, 695, 782, 1501
XapI RAATTY 7 cut(s) 104, 262, 504, 744, 751, 1592, 1740
XceI RCATGY 2 cut(s) 857, 1052
XspI CTAG 6 cut(s) 27, 525, 656, 668, 1016, 1296
Zsp2I ATGCAT 1 cut(s) 1732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.