Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0005877

Physical Location & Seq

Genomic Coordinates Forward (+)

45958845 .. 45968106

Gene Structure 9262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019076

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGGGCGCACAGAAGAGAGGCGCGCCTAGGGCTTCAGAGGACCCTGAGGAACTGCCACGTCTCCCACTCCAAGCCATCCTCTTAGCCGATAGTTTCACCACCAAATTCCGACCCATCACCCTTGAACGCCCCAAAGTGCTGTTGCCGTTAGTAAATGCCCCGATGATCAGTTACACGTTAGCATGGCTTGAGTCTGCTGGCGTTGAGGAGGTTTTTGTTTTCTGCTGTGCTCACTCCAAGCAAGTGATAAGTTATTTGGAGAATTCTGAGTGGTTTTCTCAACCAAACTTCACGGTCACCACAATTGAGTCACATGATTCTGTTAGTGCCGGAGATGCTCTGCGCTTGATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTAATCAGTGGGGATACCGTGAGCAACATGTCGCTTACTCAGGTGCTTCAAGAACATAAAGAGAGAAGAAAGAAAGATAGCAATGCCGCAATGACAATTGTTATTAAACGGTCAAAGCCTTCTCAAATCATTCACCAATGTCGACTGGGCACTGATGTGCTGTTTATGGCAATAGATCCCAACACAAAGCAGCTCTTATACTATGAGGACAAGGCAGACCATGCAAAAGGATCTATATATCTAAATAAATTATTGCTTGCTGACAAATCTTCGATTTCTCTGCATAATGACAAACAGGATTGCTATATCGACATATGCTCTCCTGAAGTCCTCAGCCTTTTCACAGACAATTTTGACTATGAACATTTACGCCGTCATTTTTTAAAGGGATTGCTTGTTGATGATATTATGGGTTACAAAATATTCACACATGAAATTCACTCGACTTATGCGGCTAGGATTGACAACTTCAGAAGCTATGACACAATCAGTAGGGACATAATTCAGAGATGGGCTTACCCATTGGTGCCAGATGTTAAGTTTTTCGGAGATTCTTCAATGAAGCTGGAAAGACAGGGGATGTATCGAGTCTCAGAACTAGGGCAATCGCGCTCTGCACAGATTGGTCCTTTTACAGTCATTGGGAATGGCACCAAGGTTGGGGACAACACCAAAATTTCAAATTCTGTTATTGGAGAAGGGTGTTCTATTGGACCAAACGTTTCCATAGAAGGTTCTTATATATGGGATAATGTCACCATTGAAGATGGCTGCAATATAAGGTATGCTATAGTATGTGATGGAGTGATAATGAAGTCTGGGGCAGTTTTGGAACCGGGTGTAGTTTTGTCTTTCAAGGTAGTGATAGGACAACAATTTATTGCTCCTTCATACTTAAAGGTATCTTTACTTCAACAACCAATAACGCAAGATAGTGATGAGAAGCTAGAGTATGTTGACAATAGCACTGGTAATGCAGAAATTTCTTCTCTTACACATGCACTGGATATATCGAATGGGGAAATAGCGAACCAACAACAGGAGACACAGTGTTGGACGACATCTGAGCTTGGTACTGGTGGGGCTGGTTATGTTTGGTCAATTTGTGAAGGAGGCCATGATGAAGAATGGAGGCATTCAGTTGCTCCCATTCCCACAGAGAAACTTGCTGAGGTTATACAAGCTGCAGAGGATGATCATGATGGCAGCAGTCTCCCACCTTCGGATTCTAATGATTCTGATTATGAAGAAGAGCCTAGAGACGATAGAGACGACTCTTACTTTGAAAATGAGGTTGAAGCAACCTTCCTAAGAGCTGTGGATGAAAATATTAAAGTAGAGAATGTCGTTTTAGAAGTGAAATCACTGAGATTGTCATACAACAAGCAAACTGCAGACTGTGCTGGAGCTATATTTTATTCAATGATGAAATTGGCATTAGAATCTCCACATAATTCAGCAGGTGAATTGGTCCAGGCTACTACGAAGGTAATTACAAAATGGAAGGGACTGCTGAAGTATTACCTATCAGACATCGATGAAGAGATAGAAGTAATAATGAAATTTGAGGATATGTGTTTGGAGTCCGCTAAGGAGTTCTCCCCTGTGTTTGATAAGATACTCTATCAATTGTATGACCACACAGTTATACGGGAAGAGTCTATTCTGAGGTGGGATGATGAAAAGAGAGATGCTGATGCATCAGATAGAATTTTTGTTAGGCAGGCTGAAGATTTTATCCAATGGTTGAGAGAGGCATCTGAAGAAGAGGATGAGGAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0002183 GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005851 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0019899 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0051020 GO:0065007 GO:0065009 GO:0071704 GO:0097159 GO:0098772 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Hexapep Hexapep_2 NTP_transferase W2

Protein Analysis

723

Amino Acids

81.46

Weight (kDa)

4.7

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTP_transferase	PF00483	25 - 163	3.2e-12	Nucleotidyl transferase
LbH_EIF2B	PF25084	319 - 421	3.6e-38	EIF2B subunit epsilon LbH domain
GMPPB_C	PF25087	333 - 416	1.6e-09	GMPPB C-terminal domain
Hexapep	PF00132	340 - 373	4.6e-07	Bacterial transferase hexapeptide (six repeats)
W2	PF02020	643 - 721	1.5e-16	eIF4-gamma/eIF5/eIF2-epsilon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005877)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34970 AT4G18300
fragaria_vesca	FvH4_2g12670 FvH4_2g12670
malus_domestica	MD00G1051200.v1.1 MD12G1232500.v1.1 MD17G1228000.v1.1
prunus_persica	Prupe.6G335900_v2.0.a1
pyrus_communis	pycom04g19200 pycom12g21490
rosa_chinensis	RchiOBHm_Chr2g0129391 RchiOBHm_Chr6g0273391
rosa_laevigata	RLG00000013621 RLG00000019076
rosa_multiflora	Rmu_sc0001171.1_g000012 Rmu_sc0005891.1_g000011
rosa_roxburghii	Rroxscaffold_2G00114650 Rroxscaffold_7G00195420
rosa_rugosa	Rorug06G0074500
rosa_samantha	Rh2AG338500 Rh2BG346600 Rh2CG326000 Rh2DG364400 Rh6AG189600 Rh6BG193000 Rh6CG192800 Rh6DG184300
rosa_wichuraiana	Rw6G016500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1835
Acc36I	ACCTGC	1 cut(s)	1835
AccB1I	GGYRCC	2 cut(s)	910, 1034
AccI	GTMKAC	1 cut(s)	526
AccII	CGCG	2 cut(s)	23, 994
AciI	CCGC	3 cut(s)	471, 836, 1971
AclI	AACGTT	1 cut(s)	1104
AclWI	GGATC	2 cut(s)	554, 622
AcsI	RAATTY	8 cut(s)	104, 262, 819, 1059, 1066, 1365, 1946, 2094
AcuI	CTGAAG	6 cut(s)	18, 729, 838, 1919, 2133, 2166
AfaI	GTAC	1 cut(s)	1459
AfiI	CCNNNNNNNGG	3 cut(s)	1044, 1423, 1606
AflIII	ACRYGT	2 cut(s)	174, 411
AjiI	CACGTC	1 cut(s)	59
AjnI	CCWGG	1 cut(s)	1857
AleI	CACNNNNGTG	1 cut(s)	539
AluBI	AGCT	8 cut(s)	577, 861, 949, 1330, 1453, 1568, 1700, 1793
AluI	AGCT	8 cut(s)	577, 861, 949, 1330, 1453, 1568, 1700, 1793
Alw21I	GWGCWC	1 cut(s)	232
Alw26I	GTCTC	6 cut(s)	65, 979, 1421, 1601, 1638, 1647
AlwI	GGATC	2 cut(s)	554, 622
AoxI	GGCC	1 cut(s)	1498
ApeKI	GCWGC	4 cut(s)	574, 1155, 1568, 1590
ApoI	RAATTY	8 cut(s)	104, 262, 819, 1059, 1066, 1365, 1946, 2094
ArsI	GACNNNNNNTTYG	2 cut(s)	1649, 1681
AscI	GGCGCGCC	1 cut(s)	21
AspA2I	CCTAGG	1 cut(s)	26
AspLEI	GCGC	6 cut(s)	8, 23, 25, 345, 360, 996
AspS9I	GGNCC	4 cut(s)	40, 1010, 1097, 1855
AsuC2I	CCSGG	1 cut(s)	1221
AsuHPI	GGTGA	6 cut(s)	88, 109, 289, 509, 1132, 1859
AvaII	GGWCC	4 cut(s)	40, 1010, 1097, 1855
AvrII	CCTAGG	1 cut(s)	26
AxyI	CCTNAGG	1 cut(s)	45
BaeGI	GKGCMC	1 cut(s)	536
BanI	GGYRCC	2 cut(s)	910, 1034
BarI	GAAGNNNNNNTAC	2 cut(s)	1278, 1310
Bbv12I	GWGCWC	1 cut(s)	232
BbvCI	CCTCAGC	2 cut(s)	716, 1554
BbvI	GCAGC	4 cut(s)	586, 1142, 1555, 1602
BccI	CCATC	6 cut(s)	83, 122, 888, 1145, 1178, 1580
BceAI	ACGGC	2 cut(s)	130, 741
BcgI	CGANNNNNNTGC	2 cut(s)	646, 680
BciT130I	CCWGG	1 cut(s)	1859
BciVI	GTATCC	1 cut(s)	391
BclI	TGATCA	2 cut(s)	165, 1579
BcnI	CCSGG	1 cut(s)	1221
BcoDI	GTCTC	6 cut(s)	65, 979, 1421, 1601, 1638, 1647
BfaI	CTAG	5 cut(s)	27, 840, 983, 1331, 1641
BfmI	CTRYAG	3 cut(s)	1173, 1569, 1776
BfuAI	ACCTGC	1 cut(s)	1835
BfuI	GTATCC	1 cut(s)	391
BisI	GCNGC	6 cut(s)	471, 575, 837, 1156, 1569, 1591
BlnI	CCTAGG	1 cut(s)	26
BlsI	GCNGC	6 cut(s)	472, 576, 838, 1157, 1570, 1592
Bme1390I	CCNGG	2 cut(s)	1221, 1859
Bme18I	GGWCC	4 cut(s)	40, 1010, 1097, 1855
BmgBI	CACGTC	1 cut(s)	59
BmgT120I	GGNCC	4 cut(s)	40, 1010, 1097, 1855
BmiI	GGNNCC	4 cut(s)	42, 912, 1036, 1218
BmrFI	CCNGG	2 cut(s)	1221, 1859
BmrI	ACTGGG	1 cut(s)	539
BmsI	GCATC	5 cut(s)	325, 2065, 2071, 2093, 2150
BmuI	ACTGGG	1 cut(s)	539
BpmI	CTGGAG	1 cut(s)	1809
Bpu10I	CCTNAGC	3 cut(s)	716, 1554, 1974
BpuEI	CTTGAG	1 cut(s)	209
BpuMI	CCSGG	1 cut(s)	1221
Bsa29I	ATCGAT	1 cut(s)	1920
BsaJI	CCNNGG	2 cut(s)	26, 1038
BsaXI	ACNNNNNCTCC	4 cut(s)	366, 396, 1418, 1448
Bsc4I	CCNNNNNNNGG	3 cut(s)	1044, 1423, 1606
Bse1I	ACTGG	4 cut(s)	534, 1357, 1392, 1465
Bse21I	CCTNAGG	1 cut(s)	45
Bse3DI	GCAATG	3 cut(s)	367, 472, 480
BseBI	CCWGG	1 cut(s)	1859
BseCI	ATCGAT	1 cut(s)	1920
BseDI	CCNNGG	2 cut(s)	26, 1038
BseGI	GGATG	6 cut(s)	75, 969, 1582, 1711, 2065, 2161
BseLI	CCNNNNNNNGG	3 cut(s)	1044, 1423, 1606
BseMI	GCAATG	3 cut(s)	367, 472, 480
BseMII	CTCAG	9 cut(s)	36, 258, 437, 730, 990, 1440, 1545, 1742, 2042
BseNI	ACTGG	4 cut(s)	534, 1357, 1392, 1465
BsePI	GCGCGC	1 cut(s)	21
BseRI	GAGGAG	1 cut(s)	221
BseSI	GKGCMC	1 cut(s)	536
BseXI	GCAGC	4 cut(s)	586, 1142, 1555, 1602
BsgI	GTGCAG	1 cut(s)	984
Bsh1236I	CGCG	2 cut(s)	23, 994
BshFI	GGCC	1 cut(s)	1500
BshNI	GGYRCC	2 cut(s)	910, 1034
BshVI	ATCGAT	1 cut(s)	1920
BsiHKAI	GWGCWC	1 cut(s)	232
BsiSI	CCGG	2 cut(s)	330, 1220
BslFI	GGGAC	3 cut(s)	893, 1061, 1905
BslI	CCNNNNNNNGG	3 cut(s)	1044, 1423, 1606
BsmAI	GTCTC	6 cut(s)	65, 979, 1421, 1601, 1638, 1647
BsmBI	CGTCTC	3 cut(s)	65, 1638, 1647
BsmFI	GGGAC	3 cut(s)	893, 1061, 1905
BsmI	GAATGC	1 cut(s)	1519
BsnI	GGCC	1 cut(s)	1500
Bsp1286I	GDGCHC	2 cut(s)	232, 536
Bsp143I	GATC	4 cut(s)	165, 559, 614, 1579
BspACI	CCGC	3 cut(s)	471, 836, 1971
BspANI	GGCC	1 cut(s)	1500
BspCNI	CTCAG	9 cut(s)	37, 259, 436, 729, 989, 1441, 1546, 1743, 2043
BspDI	ATCGAT	1 cut(s)	1920
BspFNI	CGCG	2 cut(s)	23, 994
BspHI	TCATGA	1 cut(s)	1582
BspLI	GGNNCC	4 cut(s)	42, 912, 1036, 1218
BspMAI	CTGCAG	2 cut(s)	1573, 1780
BspMI	ACCTGC	1 cut(s)	1835
BspPI	GGATC	2 cut(s)	554, 622
BspQI	GCTCTTC	1 cut(s)	1629
BspT107I	GGYRCC	2 cut(s)	910, 1034
BsrDI	GCAATG	3 cut(s)	367, 472, 480
BsrI	ACTGG	4 cut(s)	534, 1357, 1392, 1465
BssECI	CCNNGG	2 cut(s)	26, 1038
BssHII	GCGCGC	1 cut(s)	21
BssMI	GATC	4 cut(s)	165, 559, 614, 1579
BssT1I	CCWWGG	2 cut(s)	26, 1038
Bst2UI	CCWGG	1 cut(s)	1859
Bst4CI	ACNGT	7 cut(s)	295, 403, 495, 1021, 1434, 1784, 2029
Bst6I	CTCTTC	6 cut(s)	8, 1629, 1920, 2034, 2145, 2157
BstAPI	GCANNNNNTGC	2 cut(s)	605, 1784
BstC8I	GCNNGC	4 cut(s)	23, 199, 642, 2109
BstEII	GGTNACC	1 cut(s)	295
BstF5I	GGATG	6 cut(s)	75, 969, 1582, 1711, 2065, 2161
BstFNI	CGCG	2 cut(s)	23, 994
BstHHI	GCGC	6 cut(s)	8, 23, 25, 345, 360, 996
BstKTI	GATC	4 cut(s)	168, 562, 617, 1582
BstMAI	GTCTC	6 cut(s)	65, 979, 1421, 1601, 1638, 1647
BstMBI	GATC	4 cut(s)	165, 559, 614, 1579
BstMWI	GCNNNNNNNGC	4 cut(s)	29, 335, 605, 1784
BstNI	CCWGG	1 cut(s)	1859
BstNSI	RCATGY	2 cut(s)	415, 1385
BstPI	GGTNACC	1 cut(s)	295
BstSCI	CCNGG	2 cut(s)	1219, 1857
BstSFI	CTRYAG	3 cut(s)	1173, 1569, 1776
BstSLI	GKGCMC	1 cut(s)	536
BstUI	CGCG	2 cut(s)	23, 994
BstV1I	GCAGC	4 cut(s)	586, 1142, 1555, 1602
BstX2I	RGATCY	2 cut(s)	559, 614
BstYI	RGATCY	2 cut(s)	559, 614
Bsu15I	ATCGAT	1 cut(s)	1920
Bsu36I	CCTNAGG	1 cut(s)	45
BsuI	GTATCC	1 cut(s)	391
BsuRI	GGCC	1 cut(s)	1500
BsuTUI	ATCGAT	1 cut(s)	1920
BtrI	CACGTC	1 cut(s)	59
BtsCI	GGATG	6 cut(s)	75, 969, 1582, 1711, 2065, 2161
BtsIMutI	CAGTG	6 cut(s)	397, 534, 1350, 1385, 1439, 1748
BveI	ACCTGC	1 cut(s)	1835
Cac8I	GCNNGC	4 cut(s)	23, 199, 642, 2109
CciI	TCATGA	1 cut(s)	1582
CfoI	GCGC	6 cut(s)	8, 23, 25, 345, 360, 996
Cfr13I	GGNCC	4 cut(s)	40, 1010, 1097, 1855
ClaI	ATCGAT	1 cut(s)	1920
Csp6I	GTAC	1 cut(s)	1458
CviAII	CATG	9 cut(s)	183, 314, 371, 412, 605, 815, 1382, 1502, 1583
CviQI	GTAC	1 cut(s)	1458
DpnI	GATC	4 cut(s)	167, 561, 616, 1581
DpnII	GATC	4 cut(s)	165, 559, 614, 1579
DraI	TTTAAA	1 cut(s)	768
Eam1104I	CTCTTC	6 cut(s)	8, 1629, 1920, 2034, 2145, 2157
EarI	CTCTTC	6 cut(s)	8, 1629, 1920, 2034, 2145, 2157
Eco130I	CCWWGG	2 cut(s)	26, 1038
Eco47I	GGWCC	4 cut(s)	40, 1010, 1097, 1855
Eco57I	CTGAAG	6 cut(s)	18, 729, 838, 1919, 2133, 2166
Eco81I	CCTNAGG	1 cut(s)	45
Eco91I	GGTNACC	1 cut(s)	295
EcoO109I	RGGNCCY	1 cut(s)	40
EcoO65I	GGTNACC	1 cut(s)	295
EcoRI	GAATTC	1 cut(s)	262
EcoRII	CCWGG	1 cut(s)	1857
EcoT14I	CCWWGG	2 cut(s)	26, 1038
EcoT22I	ATGCAT	1 cut(s)	2086
ErhI	CCWWGG	2 cut(s)	26, 1038
Esp3I	CGTCTC	3 cut(s)	65, 1638, 1647
FaeI	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1385, 1505, 1586
FalI	AAGNNNNNCTT	2 cut(s)	563, 595
FaqI	GGGAC	3 cut(s)	893, 1061, 1905
FatI	CATG	9 cut(s)	182, 313, 370, 411, 604, 814, 1381, 1501, 1582
FauNDI	CATATG	1 cut(s)	698
FbaI	TGATCA	2 cut(s)	165, 1579
FblI	GTMKAC	1 cut(s)	526
Fnu4HI	GCNGC	6 cut(s)	471, 575, 837, 1156, 1569, 1591
FokI	GGATG	5 cut(s)	62, 976, 1589, 1718, 2072
Fsp4HI	GCNGC	6 cut(s)	471, 575, 837, 1156, 1569, 1591
FspBI	CTAG	5 cut(s)	27, 840, 983, 1331, 1641
GlaI	GCGC	6 cut(s)	7, 22, 24, 344, 359, 995
GluI	GCNGC	6 cut(s)	471, 575, 837, 1156, 1569, 1591
GsuI	CTGGAG	1 cut(s)	1809
HaeIII	GGCC	1 cut(s)	1500
HapII	CCGG	2 cut(s)	330, 1220
HhaI	GCGC	6 cut(s)	8, 23, 25, 345, 360, 996
Hin1II	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1385, 1505, 1586
Hin6I	GCGC	6 cut(s)	6, 21, 23, 343, 358, 994
HinP1I	GCGC	6 cut(s)	6, 21, 23, 343, 358, 994
HincII	GTYRAC	2 cut(s)	527, 1342
HindII	GTYRAC	2 cut(s)	527, 1342
HpaII	CCGG	2 cut(s)	330, 1220
HphI	GGTGA	6 cut(s)	88, 109, 289, 509, 1132, 1859
Hpy166II	GTNNAC	2 cut(s)	527, 1342
Hpy188III	TCNNGA	3 cut(s)	434, 707, 1583
Hpy8I	GTNNAC	2 cut(s)	527, 1342
HpyAV	CCTTC	9 cut(s)	513, 1076, 1109, 1281, 1487, 1614, 1699, 1864, 1882
HpyCH4III	ACNGT	7 cut(s)	295, 403, 495, 1021, 1434, 1784, 2029
HpyCH4IV	ACGT	3 cut(s)	58, 176, 1104
HpyCH4V	TGCA	9 cut(s)	608, 667, 1001, 1158, 1361, 1385, 1571, 1778, 2084
HpyF10VI	GCNNNNNNNGC	4 cut(s)	29, 335, 605, 1784
HpySE526I	ACGT	3 cut(s)	58, 176, 1104
Hsp92II	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1385, 1505, 1586
HspAI	GCGC	6 cut(s)	6, 21, 23, 343, 358, 994
Ksp22I	TGATCA	2 cut(s)	165, 1579
Kzo9I	GATC	4 cut(s)	165, 559, 614, 1579
LguI	GCTCTTC	1 cut(s)	1629
LmnI	GCTCC	3 cut(s)	1273, 1534, 1790
Lsp1109I	GCAGC	4 cut(s)	586, 1142, 1555, 1602
LweI	GCATC	5 cut(s)	325, 2065, 2071, 2093, 2150
MaeI	CTAG	5 cut(s)	27, 840, 983, 1331, 1641
MaeII	ACGT	3 cut(s)	58, 176, 1104
MaeIII	GTNAC	5 cut(s)	170, 295, 309, 797, 1138
MalI	GATC	4 cut(s)	167, 561, 616, 1581
MboI	GATC	4 cut(s)	165, 559, 614, 1579
MfeI	CAATTG	3 cut(s)	303, 480, 2012
MflI	RGATCY	2 cut(s)	559, 614
MhlI	GDGCHC	2 cut(s)	232, 536
MlyI	GAGTC	6 cut(s)	200, 317, 981, 1652, 1976, 2051
MmeI	TCCRAC	2 cut(s)	133, 1418
Mph1103I	ATGCAT	1 cut(s)	2086
MseI	TTAA	5 cut(s)	489, 767, 921, 1280, 1716
MslI	CAYNNNNRTG	1 cut(s)	539
MspI	CCGG	2 cut(s)	330, 1220
MspR9I	CCNGG	2 cut(s)	1221, 1859
MunI	CAATTG	3 cut(s)	303, 480, 2012
Mva1269I	GAATGC	1 cut(s)	1519
MvaI	CCWGG	1 cut(s)	1859
MvnI	CGCG	2 cut(s)	23, 994
MwoI	GCNNNNNNNGC	4 cut(s)	29, 335, 605, 1784
NciI	CCSGG	1 cut(s)	1221
NdeI	CATATG	1 cut(s)	698
NdeII	GATC	4 cut(s)	165, 559, 614, 1579
NlaIII	CATG	9 cut(s)	186, 317, 374, 415, 608, 818, 1385, 1505, 1586
NlaIV	GGNNCC	4 cut(s)	42, 912, 1036, 1218
NmuCI	GTSAC	3 cut(s)	295, 309, 1138
NsiI	ATGCAT	1 cut(s)	2086
NspI	RCATGY	2 cut(s)	415, 1385
OliI	CACNNNNGTG	1 cut(s)	539
PagI	TCATGA	1 cut(s)	1582
PalAI	GGCGCGCC	1 cut(s)	21
PaqCI	CACCTGC	1 cut(s)	1835
PauI	GCGCGC	1 cut(s)	21
PciI	ACATGT	1 cut(s)	411
PciSI	GCTCTTC	1 cut(s)	1629
PcsI	WCGNNNNNNNCGW	1 cut(s)	1653
PctI	GAATGC	1 cut(s)	1519
PfeI	GAWTC	5 cut(s)	317, 935, 1610, 1619, 1826
PkrI	GCNGC	6 cut(s)	472, 576, 838, 1157, 1570, 1592
PleI	GAGTC	6 cut(s)	199, 316, 980, 1652, 1975, 2050
PpsI	GAGTC	6 cut(s)	199, 316, 980, 1652, 1975, 2050
PpuMI	RGGWCCY	1 cut(s)	40
PscI	ACATGT	1 cut(s)	411
Psp1406I	AACGTT	1 cut(s)	1104
Psp5II	RGGWCCY	1 cut(s)	40
Psp6I	CCWGG	1 cut(s)	1857
PspEI	GGTNACC	1 cut(s)	295
PspGI	CCWGG	1 cut(s)	1857
PspN4I	GGNNCC	4 cut(s)	42, 912, 1036, 1218
PspPI	GGNCC	4 cut(s)	40, 1010, 1097, 1855
PspPPI	RGGWCCY	1 cut(s)	40
PstI	CTGCAG	2 cut(s)	1573, 1780
PsuI	RGATCY	2 cut(s)	559, 614
PteI	GCGCGC	1 cut(s)	21
RsaI	GTAC	1 cut(s)	1459
RsaNI	GTAC	1 cut(s)	1458
RseI	CAYNNNNRTG	1 cut(s)	539
SalI	GTCGAC	1 cut(s)	525
SapI	GCTCTTC	1 cut(s)	1629
SaqAI	TTAA	5 cut(s)	489, 767, 921, 1280, 1716
SatI	GCNGC	6 cut(s)	471, 575, 837, 1156, 1569, 1591
Sau3AI	GATC	4 cut(s)	165, 559, 614, 1579
Sau96I	GGNCC	4 cut(s)	40, 1010, 1097, 1855
SchI	GAGTC	6 cut(s)	200, 317, 981, 1652, 1976, 2051
ScrFI	CCNGG	2 cut(s)	1221, 1859
SduI	GDGCHC	2 cut(s)	232, 536
SfaNI	GCATC	5 cut(s)	325, 2065, 2071, 2093, 2150
SfcI	CTRYAG	3 cut(s)	1173, 1569, 1776
SgsI	GGCGCGCC	1 cut(s)	21
SinI	GGWCC	4 cut(s)	40, 1010, 1097, 1855
SmiMI	CAYNNNNRTG	1 cut(s)	539
SmlI	CTYRAG	1 cut(s)	188
SmoI	CTYRAG	1 cut(s)	188
SsiI	CCGC	3 cut(s)	471, 836, 1971
SspI	AATATT	2 cut(s)	807, 1714
SspMI	CTAG	5 cut(s)	27, 840, 983, 1331, 1641
StyD4I	CCNGG	2 cut(s)	1219, 1857
StyI	CCWWGG	2 cut(s)	26, 1038
TaaI	ACNGT	7 cut(s)	295, 403, 495, 1021, 1434, 1784, 2029
TaiI	ACGT	3 cut(s)	61, 179, 1107
TaqI	TCGA	7 cut(s)	526, 656, 693, 827, 970, 1397, 1920
TauI	GCSGC	2 cut(s)	473, 839
TfiI	GAWTC	5 cut(s)	317, 935, 1610, 1619, 1826
Tru1I	TTAA	5 cut(s)	489, 767, 921, 1280, 1716
Tru9I	TTAA	5 cut(s)	489, 767, 921, 1280, 1716
TscAI	CASTG	6 cut(s)	397, 541, 1357, 1392, 1439, 1755
TseFI	GTSAC	3 cut(s)	295, 309, 1138
TseI	GCWGC	4 cut(s)	574, 1155, 1568, 1590
Tsp45I	GTSAC	3 cut(s)	295, 309, 1138
TspRI	CASTG	6 cut(s)	397, 541, 1357, 1392, 1439, 1755
VpaK11BI	GGWCC	4 cut(s)	40, 1010, 1097, 1855
XapI	RAATTY	8 cut(s)	104, 262, 819, 1059, 1066, 1365, 1946, 2094
XceI	RCATGY	2 cut(s)	415, 1385
XmaJI	CCTAGG	1 cut(s)	26
XmiI	GTMKAC	1 cut(s)	526
XspI	CTAG	5 cut(s)	27, 840, 983, 1331, 1641
Zsp2I	ATGCAT	1 cut(s)	2086

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.