RNAse P Rpr2/Rpp21/SNM1 subunit domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G41270 |
| fragaria_vesca | FvH4_5g02380 |
| malus_domestica | MD07G1059600.v1.1 MD14G1104200.v1.1 |
| prunus_persica | Prupe.5G099900_v2.0.a1 |
| pyrus_communis | pycom07g07940 pycom14g10040 |
| rosa_chinensis | RchiOBHm_Chr7g0197731 |
| rosa_laevigata | RLG00000003916 RLG00000015448 |
| rosa_rugosa | Rorug07G0042600 |
| rosa_samantha | Rh7AG167000 Rh7BG169100 Rh7CG175500 Rh7CG175600 Rh7DG168800 |
| rosa_wichuraiana | Rw7G014530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 626 |
| AciI | CCGC | 5 cut(s) | 11, 411, 589, 656, 668 |
| AclI | AACGTT | 1 cut(s) | 198 |
| AcsI | RAATTY | 1 cut(s) | 50 |
| AgsI | TTSAA | 7 cut(s) | 50, 55, 211, 273, 401, 481, 646 |
| AhlI | ACTAGT | 1 cut(s) | 473 |
| AluBI | AGCT | 3 cut(s) | 128, 136, 778 |
| AluI | AGCT | 3 cut(s) | 128, 136, 778 |
| Alw21I | GWGCWC | 1 cut(s) | 182 |
| Alw26I | GTCTC | 1 cut(s) | 146 |
| AoxI | GGCC | 2 cut(s) | 74, 717 |
| ApoI | RAATTY | 1 cut(s) | 50 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 240, 288 |
| AspS9I | GGNCC | 1 cut(s) | 75 |
| Bbv12I | GWGCWC | 1 cut(s) | 182 |
| BccI | CCATC | 1 cut(s) | 796 |
| BceAI | ACGGC | 1 cut(s) | 741 |
| BcoDI | GTCTC | 1 cut(s) | 146 |
| BcuI | ACTAGT | 1 cut(s) | 473 |
| BfaI | CTAG | 3 cut(s) | 137, 474, 847 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 725 |
| BisI | GCNGC | 1 cut(s) | 590 |
| BlsI | GCNGC | 1 cut(s) | 591 |
| BmgT120I | GGNCC | 1 cut(s) | 75 |
| BmsI | GCATC | 4 cut(s) | 111, 386, 412, 737 |
| BsaWI | WCCGGW | 1 cut(s) | 619 |
| BseGI | GGATG | 4 cut(s) | 377, 571, 639, 778 |
| BseRI | GAGGAG | 6 cut(s) | 472, 674, 677, 758, 779, 782 |
| BshFI | GGCC | 2 cut(s) | 76, 719 |
| BsiHKAI | GWGCWC | 1 cut(s) | 182 |
| BsiSI | CCGG | 2 cut(s) | 60, 620 |
| BslFI | GGGAC | 2 cut(s) | 291, 393 |
| BsmAI | GTCTC | 1 cut(s) | 146 |
| BsmFI | GGGAC | 2 cut(s) | 291, 393 |
| BsnI | GGCC | 2 cut(s) | 76, 719 |
| Bsp1286I | GDGCHC | 1 cut(s) | 182 |
| Bsp143I | GATC | 4 cut(s) | 40, 389, 523, 559 |
| BspACI | CCGC | 5 cut(s) | 11, 411, 589, 656, 668 |
| BspANI | GGCC | 2 cut(s) | 76, 719 |
| BspQI | GCTCTTC | 1 cut(s) | 170 |
| BssMI | GATC | 4 cut(s) | 40, 389, 523, 559 |
| Bst4CI | ACNGT | 3 cut(s) | 229, 298, 407 |
| Bst6I | CTCTTC | 9 cut(s) | 170, 231, 279, 347, 641, 708, 735, 747, 756 |
| BstC8I | GCNNGC | 2 cut(s) | 126, 599 |
| BstDEI | CTNAG | 1 cut(s) | 156 |
| BstF5I | GGATG | 4 cut(s) | 377, 571, 639, 778 |
| BstKTI | GATC | 4 cut(s) | 43, 392, 526, 562 |
| BstMAI | GTCTC | 1 cut(s) | 146 |
| BstMBI | GATC | 4 cut(s) | 40, 389, 523, 559 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 10, 598, 725 |
| BsuRI | GGCC | 2 cut(s) | 76, 719 |
| BtsCI | GGATG | 4 cut(s) | 377, 571, 639, 778 |
| BtsI | GCAGTG | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 3 cut(s) | 180, 489, 526 |
| Cac8I | GCNNGC | 2 cut(s) | 126, 599 |
| Cfr13I | GGNCC | 1 cut(s) | 75 |
| CviJI | RGCY | 9 cut(s) | 32, 76, 128, 136, 597, 719, 778, 785, 790 |
| CviKI_1 | RGCY | 9 cut(s) | 32, 76, 128, 136, 597, 719, 778, 785, 790 |
| DdeI | CTNAG | 1 cut(s) | 156 |
| DpnI | GATC | 4 cut(s) | 42, 391, 525, 561 |
| DpnII | GATC | 4 cut(s) | 40, 389, 523, 559 |
| Eam1104I | CTCTTC | 9 cut(s) | 170, 231, 279, 347, 641, 708, 735, 747, 756 |
| EarI | CTCTTC | 9 cut(s) | 170, 231, 279, 347, 641, 708, 735, 747, 756 |
| EciI | GGCGGA | 2 cut(s) | 671, 683 |
| EcoRI | GAATTC | 1 cut(s) | 50 |
| FaiI | YATR | 1 cut(s) | 546 |
| FaqI | GGGAC | 2 cut(s) | 291, 393 |
| FauI | CCCGC | 1 cut(s) | 418 |
| FblI | GTMKAC | 1 cut(s) | 626 |
| Fnu4HI | GCNGC | 1 cut(s) | 590 |
| FokI | GGATG | 4 cut(s) | 364, 578, 646, 785 |
| Fsp4HI | GCNGC | 1 cut(s) | 590 |
| FspBI | CTAG | 3 cut(s) | 137, 474, 847 |
| GluI | GCNGC | 1 cut(s) | 590 |
| HaeIII | GGCC | 2 cut(s) | 76, 719 |
| HapII | CCGG | 2 cut(s) | 60, 620 |
| HincII | GTYRAC | 1 cut(s) | 627 |
| HindII | GTYRAC | 1 cut(s) | 627 |
| HinfI | GANTC | 3 cut(s) | 241, 289, 347 |
| HpaII | CCGG | 2 cut(s) | 60, 620 |
| Hpy166II | GTNNAC | 2 cut(s) | 553, 627 |
| Hpy188I | TCNGA | 4 cut(s) | 394, 610, 733, 834 |
| Hpy188III | TCNNGA | 4 cut(s) | 145, 216, 442, 563 |
| Hpy8I | GTNNAC | 2 cut(s) | 553, 627 |
| Hpy99I | CGWCG | 1 cut(s) | 631 |
| HpyAV | CCTTC | 4 cut(s) | 15, 88, 475, 697 |
| HpyCH4III | ACNGT | 3 cut(s) | 229, 298, 407 |
| HpyCH4IV | ACGT | 1 cut(s) | 198 |
| HpyCH4V | TGCA | 2 cut(s) | 124, 425 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 10, 598, 725 |
| HpyF3I | CTNAG | 1 cut(s) | 156 |
| HpySE526I | ACGT | 1 cut(s) | 198 |
| Kzo9I | GATC | 4 cut(s) | 40, 389, 523, 559 |
| LguI | GCTCTTC | 1 cut(s) | 170 |
| LpnPI | CCDG | 6 cut(s) | 73, 201, 342, 611, 633, 764 |
| LweI | GCATC | 4 cut(s) | 111, 386, 412, 737 |
| MaeI | CTAG | 3 cut(s) | 137, 474, 847 |
| MaeII | ACGT | 1 cut(s) | 198 |
| MalI | GATC | 4 cut(s) | 42, 391, 525, 561 |
| MboI | GATC | 4 cut(s) | 40, 389, 523, 559 |
| MfeI | CAATTG | 1 cut(s) | 14 |
| MhlI | GDGCHC | 1 cut(s) | 182 |
| MluCI | AATT | 6 cut(s) | 14, 45, 50, 206, 265, 333 |
| MlyI | GAGTC | 1 cut(s) | 341 |
| MmeI | TCCRAC | 2 cut(s) | 248, 324 |
| MroXI | GAANNNNTTC | 2 cut(s) | 240, 288 |
| MseI | TTAA | 1 cut(s) | 807 |
| MslI | CAYNNNNRTG | 1 cut(s) | 119 |
| MspI | CCGG | 2 cut(s) | 60, 620 |
| MunI | CAATTG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 10, 598, 725 |
| NdeII | GATC | 4 cut(s) | 40, 389, 523, 559 |
| PciSI | GCTCTTC | 1 cut(s) | 170 |
| PdmI | GAANNNNTTC | 2 cut(s) | 240, 288 |
| PfeI | GAWTC | 2 cut(s) | 241, 289 |
| PkrI | GCNGC | 1 cut(s) | 591 |
| PleI | GAGTC | 1 cut(s) | 341 |
| PpsI | GAGTC | 1 cut(s) | 341 |
| Psp1406I | AACGTT | 1 cut(s) | 198 |
| PspPI | GGNCC | 1 cut(s) | 75 |
| RseI | CAYNNNNRTG | 1 cut(s) | 119 |
| SalI | GTCGAC | 1 cut(s) | 625 |
| SapI | GCTCTTC | 1 cut(s) | 170 |
| SaqAI | TTAA | 1 cut(s) | 807 |
| SatI | GCNGC | 1 cut(s) | 590 |
| Sau3AI | GATC | 4 cut(s) | 40, 389, 523, 559 |
| Sau96I | GGNCC | 1 cut(s) | 75 |
| SchI | GAGTC | 1 cut(s) | 341 |
| SduI | GDGCHC | 1 cut(s) | 182 |
| SetI | ASST | 9 cut(s) | 130, 138, 144, 201, 331, 552, 677, 683, 780 |
| SfaNI | GCATC | 4 cut(s) | 111, 386, 412, 737 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 119 |
| SpeI | ACTAGT | 1 cut(s) | 473 |
| Sse9I | AATT | 6 cut(s) | 14, 45, 50, 206, 265, 333 |
| SsiI | CCGC | 5 cut(s) | 11, 411, 589, 656, 668 |
| SspMI | CTAG | 3 cut(s) | 137, 474, 847 |
| TaaI | ACNGT | 3 cut(s) | 229, 298, 407 |
| TaiI | ACGT | 1 cut(s) | 201 |
| TaqI | TCGA | 4 cut(s) | 43, 144, 350, 626 |
| TasI | AATT | 6 cut(s) | 14, 45, 50, 206, 265, 333 |
| TauI | GCSGC | 1 cut(s) | 592 |
| TfiI | GAWTC | 2 cut(s) | 241, 289 |
| Tru1I | TTAA | 1 cut(s) | 807 |
| Tru9I | TTAA | 1 cut(s) | 807 |
| TscAI | CASTG | 3 cut(s) | 187, 496, 526 |
| TspDTI | ATGAA | 3 cut(s) | 73, 250, 297 |
| TspGWI | ACGGA | 1 cut(s) | 469 |
| TspRI | CASTG | 3 cut(s) | 187, 496, 526 |
| XapI | RAATTY | 1 cut(s) | 50 |
| XmiI | GTMKAC | 1 cut(s) | 626 |
| XmnI | GAANNNNTTC | 2 cut(s) | 240, 288 |
| XspI | CTAG | 3 cut(s) | 137, 474, 847 |