Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0012545

Physical Location & Seq

Genomic Coordinates Forward (+)

47470260 .. 47471947

Gene Structure 1688 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019152

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGCATCCAATTCCAGGTTTCGGTTTCTTCCGGTTATTGGGGAGGGCGGAGGGCGTTATAATTGATGGTATAAGATTAGGGGTGATTCCAGATGTAGTGACTTACAATACTTTGGTTCATGCATATTGTCAGTTTGTTAGCGTAGATGCAGCTTATTCTGTTGTTCATAGAATGAAAGAAGCAGGGATAAGTCCGGATGTCATTACTTACAATTCTTTGATATCTGGGGCCACCAGGAATCGCTTATTATCTCGAGTCCTGGATCTGTTTGAGGAAATGTTACAAGAGGGTATACATCCTGATGTGTGGAGTTACAATATTCTGATGCACTGTTTCTTTAAGTTAGGAAAACCTGATGAAGCCAACAGAGTCTTTCAGGATATTTTACTTAGCGACCTCACTCCTCATGCAGCTACATTTAACATAATGATTAATGGCCTTTGTAAAAATGGGTACACTGATAATGCTCTTATGTTATTTAGGAATTTACAACGTCATGGATTTGTTCCCCCGTTAGTGACATACAATATTCTTATCAGTGGGCTTTGCAAGGCACGTAGAGTGGGGCAAGCGAGGAGAATTCTAAAGGACCTTGGAGAATCAAGTCATAAGCCAAATGCTGTAACCTACACTACAGTTATGAGTTGCTGCTTTAGGTATAAGCAATATGACCAAGGGCTTGAGATTATGTCAGAGATGAAGAGTAAAGGGTATACATTTGACGGCTTTGCGTACTGCACAGTCATTGCTGCTTTACTTAAGACTGGGAGGATGGAAGGAGCAAATGCTTTCATGGAACAGATGATGAACAGTGGCATTGAAATGGATTTGGTGTCTTATAACACTTTACTTAATAAGCTTTGTAAAGAAGGCAAGGTTGAGGCTGCCTATAAGTTGTTGGATGAAATAGAGAATGAGGGCCTTTTGTGTGATAAGTATACCCATACAATCATGATTGATGGATTGTGTAAGGCGGGCAATATTGCTGGTGCTCAACAACATTTACATTATATGAATATGATGGGATTCCAGGAAAACTTGGTTGCCTTTAACTGTCTGATTGATGGCTTGGGTAAAGCTGGTGAAATCGATCGTGCAATGGAATTGTACAATTCCATGGAGACCAGGGATTCTTTTACCTATGACTCCTTGGTGCTCAATCTTTGCAAGGCTGGAAGGGTCCTTTGTGCATCTAAGCTTATGATGAAATGTTTAAGAGAGGGAATGATATTACTCTACTCTACCAGGCGAGCACTCCTTGATGGGCTTCGTTCTTCAGGGTTTACAAATGAAGCAAGAAAGCTTCAATCAAAAATTCGGTTAGCTCGGCTGTTACGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

447

Amino Acids

50.17

Weight (kDa)

8.43

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	25 - 75	8.5e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	27 - 59	5.5e-09	PPR repeat
PPR_2	PF13041	30 - 76	2.4e-15	PPR repeat family
TPR_24	PF23276	33 - 127	3.7e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	62 - 93	1.7e-06	PPR repeat
PPR_2	PF13041	65 - 114	4e-14	PPR repeat family
PPR	PF01535	68 - 98	8.7e-07	PPR repeat
PPR_3	PF13812	89 - 145	8.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	97 - 126	1.9e-06	PPR repeat
PPR_2	PF13041	100 - 149	7.4e-13	PPR repeat family
PPR_1	PF12854	133 - 161	1e-08	PPR repeat
PPR_2	PF13041	135 - 184	7.9e-15	PPR repeat family
PPR	PF01535	139 - 168	2e-07	PPR repeat
PPR_3	PF13812	159 - 217	4.3e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	167 - 196	5.6e-08	PPR repeat
PPR_2	PF13041	172 - 218	1.5e-12	PPR repeat family
PPR_long	PF17177	191 - 306	4.6e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	205 - 252	7.8e-09	PPR repeat family
PPR_2	PF13041	243 - 289	3.8e-10	PPR repeat family
TPR_24	PF23276	267 - 373	4.2e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	272 - 303	1.7e-10	PPR repeat
PPR_2	PF13041	276 - 324	2.3e-17	PPR repeat family
PPR	PF01535	278 - 308	1.2e-06	PPR repeat
PPR_1	PF12854	307 - 338	4.2e-07	PPR repeat
PPR_1	PF12854	343 - 374	1.4e-07	PPR repeat
PPR_2	PF13041	346 - 390	3.5e-08	PPR repeat family
PPR	PF01535	348 - 376	1.9e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46680
fragaria_vesca	FvH4_6g27690
malus_domestica	MD07G1055100.v1.1 MD15G1427800.v1.1
prunus_persica	Prupe.3G114500_v2.0.a1 Prupe.3G114500_v2.0.a1 Prupe.4G280300_v2.0.a1
pyrus_communis	pycom07g04330
rosa_chinensis	RchiOBHm_Chr2g0130841
rosa_laevigata	RLG00000019152
rosa_multiflora	Rmu_sc0003629.1_g000016
rosa_roxburghii	Rroxscaffold_2G00113500 Rroxscaffold_4G00318090
rosa_rugosa	Rorug02G0293500 Rorug02G0293600
rosa_samantha	Rh2AG344900 Rh2BG353300 Rh2DG371200
rosa_wichuraiana	Rw2G027470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	59, 840
AccI	GTMKAC	3 cut(s)	292, 713, 938
AccIII	TCCGGA	1 cut(s)	193
AciI	CCGC	2 cut(s)	47, 974
AclWI	GGATC	1 cut(s)	270
AcsI	RAATTY	3 cut(s)	484, 579, 1314
AcuI	CTGAAG	1 cut(s)	1260
AfaI	GTAC	3 cut(s)	455, 734, 1109
AfiI	CCNNNNNNNGG	3 cut(s)	14, 20, 37
AflII	CTTAAG	1 cut(s)	758
AgsI	TTSAA	2 cut(s)	821, 1307
AjnI	CCWGG	6 cut(s)	13, 233, 258, 1029, 1124, 1244
AluBI	AGCT	7 cut(s)	152, 413, 859, 1079, 1198, 1303, 1325
AluI	AGCT	7 cut(s)	152, 413, 859, 1079, 1198, 1303, 1325
Alw21I	GWGCWC	3 cut(s)	994, 1158, 1255
Alw26I	GTCTC	1 cut(s)	1115
AlwI	GGATC	1 cut(s)	270
Ama87I	CYCGRG	1 cut(s)	252
Aor13HI	TCCGGA	1 cut(s)	193
AoxI	GGCC	3 cut(s)	228, 436, 919
ApeKI	GCWGC	5 cut(s)	149, 410, 648, 749, 884
ApoI	RAATTY	3 cut(s)	484, 579, 1314
AseI	ATTAAT	1 cut(s)	432
AspS9I	GGNCC	4 cut(s)	228, 589, 919, 1180
AsuHPI	GGTGA	2 cut(s)	94, 1094
AvaI	CYCGRG	1 cut(s)	252
AvaII	GGWCC	2 cut(s)	589, 1180
Bbv12I	GWGCWC	3 cut(s)	994, 1158, 1255
BbvI	GCAGC	5 cut(s)	161, 422, 635, 736, 871
BccI	CCATC	6 cut(s)	59, 766, 953, 1015, 1058, 1256
BceAI	ACGGC	1 cut(s)	739
BciT130I	CCWGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
BcoDI	GTCTC	1 cut(s)	1115
BfmI	CTRYAG	1 cut(s)	633
BfrI	CTTAAG	1 cut(s)	758
BisI	GCNGC	5 cut(s)	150, 411, 649, 750, 885
BlsI	GCNGC	5 cut(s)	151, 412, 650, 751, 886
Bme1390I	CCNGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
Bme18I	GGWCC	2 cut(s)	589, 1180
BmeT110I	CYCGRG	1 cut(s)	252
BmgT120I	GGNCC	4 cut(s)	228, 589, 919, 1180
BmiI	GGNNCC	2 cut(s)	229, 1181
BmrFI	CCNGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
BmrI	ACTGGG	1 cut(s)	774
BmsI	GCATC	4 cut(s)	13, 136, 315, 1199
BmuI	ACTGGG	1 cut(s)	774
BpuEI	CTTGAG	1 cut(s)	701
Bsa29I	ATCGAT	1 cut(s)	1089
BsaAI	YACGTR	1 cut(s)	557
BsaI	GGTCTC	1 cut(s)	1115
BsaJI	CCNNGG	5 cut(s)	592, 673, 1116, 1125, 1149
BsaWI	WCCGGW	2 cut(s)	30, 193
Bsc4I	CCNNNNNNNGG	3 cut(s)	14, 20, 37
Bse1I	ACTGG	1 cut(s)	769
Bse3DI	GCAATG	2 cut(s)	744, 1104
BseAI	TCCGGA	1 cut(s)	193
BseBI	CCWGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
BseCI	ATCGAT	1 cut(s)	1089
BseDI	CCNNGG	5 cut(s)	592, 673, 1116, 1125, 1149
BseGI	GGATG	5 cut(s)	4, 202, 295, 777, 907
BseLI	CCNNNNNNNGG	3 cut(s)	14, 20, 37
BseMI	GCAATG	2 cut(s)	744, 1104
BseNI	ACTGG	1 cut(s)	769
BseRI	GAGGAG	2 cut(s)	393, 589
BseXI	GCAGC	5 cut(s)	161, 422, 635, 736, 871
BsgI	GTGCAG	1 cut(s)	721
Bsh1285I	CGRYCG	1 cut(s)	1093
BshFI	GGCC	3 cut(s)	230, 438, 921
BshVI	ATCGAT	1 cut(s)	1089
BsiEI	CGRYCG	1 cut(s)	1093
BsiHKAI	GWGCWC	3 cut(s)	994, 1158, 1255
BsiHKCI	CYCGRG	1 cut(s)	252
BsiSI	CCGG	2 cut(s)	31, 194
BslI	CCNNNNNNNGG	3 cut(s)	14, 20, 37
BsmAI	GTCTC	1 cut(s)	1115
BsnI	GGCC	3 cut(s)	230, 438, 921
Bso31I	GGTCTC	1 cut(s)	1115
BsoBI	CYCGRG	1 cut(s)	252
Bsp1286I	GDGCHC	3 cut(s)	994, 1158, 1255
Bsp13I	TCCGGA	1 cut(s)	193
Bsp1407I	TGTACA	1 cut(s)	1107
Bsp143I	GATC	2 cut(s)	262, 1090
Bsp19I	CCATGG	1 cut(s)	1116
BspACI	CCGC	2 cut(s)	47, 974
BspANI	GGCC	3 cut(s)	230, 438, 921
BspDI	ATCGAT	1 cut(s)	1089
BspEI	TCCGGA	1 cut(s)	193
BspHI	TCATGA	1 cut(s)	951
BspLI	GGNNCC	2 cut(s)	229, 1181
BspPI	GGATC	1 cut(s)	270
BspTI	CTTAAG	1 cut(s)	758
BspTNI	GGTCTC	1 cut(s)	1115
BsrDI	GCAATG	2 cut(s)	744, 1104
BsrGI	TGTACA	1 cut(s)	1107
BsrI	ACTGG	1 cut(s)	769
BssECI	CCNNGG	5 cut(s)	592, 673, 1116, 1125, 1149
BssMI	GATC	2 cut(s)	262, 1090
BssNAI	GTATAC	3 cut(s)	293, 714, 939
BssT1I	CCWWGG	4 cut(s)	592, 673, 1116, 1149
Bst1107I	GTATAC	3 cut(s)	293, 714, 939
Bst2UI	CCWGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
Bst4CI	ACNGT	5 cut(s)	332, 637, 742, 812, 1055
Bst6I	CTCTTC	1 cut(s)	695
BstAFI	CTTAAG	1 cut(s)	758
BstAUI	TGTACA	1 cut(s)	1107
BstBAI	YACGTR	1 cut(s)	557
BstC8I	GCNNGC	3 cut(s)	570, 976, 1251
BstDEI	CTNAG	2 cut(s)	389, 1194
BstDSI	CCRYGG	1 cut(s)	1116
BstF5I	GGATG	5 cut(s)	4, 202, 295, 777, 907
BstKTI	GATC	2 cut(s)	265, 1093
BstMAI	GTCTC	1 cut(s)	1115
BstMBI	GATC	2 cut(s)	262, 1090
BstMCI	CGRYCG	1 cut(s)	1093
BstNI	CCWGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
BstSCI	CCNGG	6 cut(s)	13, 233, 258, 1029, 1124, 1244
BstSFI	CTRYAG	1 cut(s)	633
BstV1I	GCAGC	5 cut(s)	161, 422, 635, 736, 871
BstX2I	RGATCY	1 cut(s)	262
BstYI	RGATCY	1 cut(s)	262
BstZ17I	GTATAC	3 cut(s)	293, 714, 939
Bsu15I	ATCGAT	1 cut(s)	1089
BsuRI	GGCC	3 cut(s)	230, 438, 921
BsuTUI	ATCGAT	1 cut(s)	1089
BtgI	CCRYGG	1 cut(s)	1116
BtsCI	GGATG	5 cut(s)	4, 202, 295, 777, 907
BtsIMutI	CAGTG	4 cut(s)	328, 456, 544, 817
Cac8I	GCNNGC	3 cut(s)	570, 976, 1251
CciI	TCATGA	1 cut(s)	951
Cfr13I	GGNCC	4 cut(s)	228, 589, 919, 1180
ClaI	ATCGAT	1 cut(s)	1089
Csp6I	GTAC	3 cut(s)	454, 733, 1108
CviAII	CATG	6 cut(s)	119, 407, 497, 793, 952, 1117
CviQI	GTAC	3 cut(s)	454, 733, 1108
DdeI	CTNAG	2 cut(s)	389, 1194
DpnI	GATC	2 cut(s)	264, 1092
DpnII	GATC	2 cut(s)	262, 1090
Eam1104I	CTCTTC	1 cut(s)	695
EarI	CTCTTC	1 cut(s)	695
EciI	GGCGGA	1 cut(s)	62
Eco130I	CCWWGG	4 cut(s)	592, 673, 1116, 1149
Eco31I	GGTCTC	1 cut(s)	1115
Eco32I	GATATC	1 cut(s)	222
Eco47I	GGWCC	2 cut(s)	589, 1180
Eco57I	CTGAAG	1 cut(s)	1260
Eco88I	CYCGRG	1 cut(s)	252
EcoO109I	RGGNCCY	3 cut(s)	589, 919, 1180
EcoRI	GAATTC	1 cut(s)	579
EcoRII	CCWGG	6 cut(s)	13, 233, 258, 1029, 1124, 1244
EcoRV	GATATC	1 cut(s)	222
EcoT14I	CCWWGG	4 cut(s)	592, 673, 1116, 1149
EcoT22I	ATGCAT	2 cut(s)	6, 124
ErhI	CCWWGG	4 cut(s)	592, 673, 1116, 1149
FaeI	CATG	6 cut(s)	122, 410, 500, 796, 955, 1120
FatI	CATG	6 cut(s)	118, 406, 496, 792, 951, 1116
FauI	CCCGC	1 cut(s)	967
FblI	GTMKAC	3 cut(s)	292, 713, 938
Fnu4HI	GCNGC	5 cut(s)	150, 411, 649, 750, 885
FokI	GGATG	4 cut(s)	209, 282, 784, 914
Fsp4HI	GCNGC	5 cut(s)	150, 411, 649, 750, 885
GluI	GCNGC	5 cut(s)	150, 411, 649, 750, 885
HaeIII	GGCC	3 cut(s)	230, 438, 921
HapII	CCGG	2 cut(s)	31, 194
Hin1II	CATG	6 cut(s)	122, 410, 500, 796, 955, 1120
HindIII	AAGCTT	3 cut(s)	857, 1196, 1301
HinfI	GANTC	8 cut(s)	85, 238, 255, 369, 599, 1026, 1130, 1145
HpaII	CCGG	2 cut(s)	31, 194
HphI	GGTGA	2 cut(s)	94, 1094
Hpy166II	GTNNAC	5 cut(s)	293, 456, 714, 939, 1284
Hpy188I	TCNGA	3 cut(s)	324, 694, 1059
Hpy188III	TCNNGA	6 cut(s)	89, 194, 252, 299, 377, 952
Hpy8I	GTNNAC	5 cut(s)	293, 456, 714, 939, 1284
HpyAV	CCTTC	3 cut(s)	770, 863, 1170
HpyCH4III	ACNGT	5 cut(s)	332, 637, 742, 812, 1055
HpyCH4IV	ACGT	3 cut(s)	493, 556, 1336
HpyF3I	CTNAG	2 cut(s)	389, 1194
HpySE526I	ACGT	3 cut(s)	493, 556, 1336
Hsp92II	CATG	6 cut(s)	122, 410, 500, 796, 955, 1120
Kpn2I	TCCGGA	1 cut(s)	193
Kzo9I	GATC	2 cut(s)	262, 1090
LmnI	GCTCC	1 cut(s)	779
Lsp1109I	GCAGC	5 cut(s)	161, 422, 635, 736, 871
LweI	GCATC	4 cut(s)	13, 136, 315, 1199
MaeII	ACGT	3 cut(s)	493, 556, 1336
MaeIII	GTNAC	6 cut(s)	97, 279, 311, 517, 622, 1332
MalI	GATC	2 cut(s)	264, 1092
MboI	GATC	2 cut(s)	262, 1090
MboII	GAAGA	3 cut(s)	19, 712, 1266
MflI	RGATCY	1 cut(s)	262
MhlI	GDGCHC	3 cut(s)	994, 1158, 1255
MluCI	AATT	8 cut(s)	9, 60, 211, 484, 579, 1103, 1111, 1314
MlyI	GAGTC	3 cut(s)	264, 378, 1139
MmeI	TCCRAC	1 cut(s)	879
Mph1103I	ATGCAT	2 cut(s)	6, 124
MroI	TCCGGA	1 cut(s)	193
MseI	TTAA	8 cut(s)	339, 420, 432, 759, 852, 1050, 1214, 1339
MslI	CAYNNNNRTG	2 cut(s)	300, 821
MspCI	CTTAAG	1 cut(s)	758
MspI	CCGG	2 cut(s)	31, 194
MspR9I	CCNGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
MvaI	CCWGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
NcoI	CCATGG	1 cut(s)	1116
NdeII	GATC	2 cut(s)	262, 1090
NlaIII	CATG	6 cut(s)	122, 410, 500, 796, 955, 1120
NlaIV	GGNNCC	2 cut(s)	229, 1181
NmeAIII	GCCGAG	1 cut(s)	1306
NmuCI	GTSAC	2 cut(s)	97, 517
NsiI	ATGCAT	2 cut(s)	6, 124
PaeR7I	CTCGAG	1 cut(s)	252
PagI	TCATGA	1 cut(s)	951
PcsI	WCGNNNNNNNCGW	1 cut(s)	1333
PfeI	GAWTC	5 cut(s)	85, 238, 599, 1026, 1130
PfoI	TCCNGGA	2 cut(s)	258, 1029
PkrI	GCNGC	5 cut(s)	151, 412, 650, 751, 886
Ple19I	CGATCG	1 cut(s)	1093
PleI	GAGTC	3 cut(s)	263, 377, 1139
PpsI	GAGTC	3 cut(s)	263, 377, 1139
Ppu21I	YACGTR	1 cut(s)	557
PpuMI	RGGWCCY	2 cut(s)	589, 1180
PshBI	ATTAAT	1 cut(s)	432
PsiI	TTATAA	2 cut(s)	59, 840
Psp5II	RGGWCCY	2 cut(s)	589, 1180
Psp6I	CCWGG	6 cut(s)	13, 233, 258, 1029, 1124, 1244
PspGI	CCWGG	6 cut(s)	13, 233, 258, 1029, 1124, 1244
PspN4I	GGNNCC	2 cut(s)	229, 1181
PspPI	GGNCC	4 cut(s)	228, 589, 919, 1180
PspPPI	RGGWCCY	2 cut(s)	589, 1180
PsuI	RGATCY	1 cut(s)	262
PvuI	CGATCG	1 cut(s)	1093
RsaI	GTAC	3 cut(s)	455, 734, 1109
RsaNI	GTAC	3 cut(s)	454, 733, 1108
RseI	CAYNNNNRTG	2 cut(s)	300, 821
SaqAI	TTAA	8 cut(s)	339, 420, 432, 759, 852, 1050, 1214, 1339
SatI	GCNGC	5 cut(s)	150, 411, 649, 750, 885
Sau3AI	GATC	2 cut(s)	262, 1090
Sau96I	GGNCC	4 cut(s)	228, 589, 919, 1180
SchI	GAGTC	3 cut(s)	264, 378, 1139
ScrFI	CCNGG	6 cut(s)	15, 235, 260, 1031, 1126, 1246
SduI	GDGCHC	3 cut(s)	994, 1158, 1255
SfaNI	GCATC	4 cut(s)	13, 136, 315, 1199
SfcI	CTRYAG	1 cut(s)	633
Sfr274I	CTCGAG	1 cut(s)	252
SinI	GGWCC	2 cut(s)	589, 1180
SlaI	CTCGAG	1 cut(s)	252
SmiMI	CAYNNNNRTG	2 cut(s)	300, 821
SmlI	CTYRAG	3 cut(s)	252, 680, 758
SmoI	CTYRAG	3 cut(s)	252, 680, 758
Sse9I	AATT	8 cut(s)	9, 60, 211, 484, 579, 1103, 1111, 1314
SsiI	CCGC	2 cut(s)	47, 974
SspI	AATATT	3 cut(s)	319, 529, 982
StyD4I	CCNGG	6 cut(s)	13, 233, 258, 1029, 1124, 1244
StyI	CCWWGG	4 cut(s)	592, 673, 1116, 1149
TaaI	ACNGT	5 cut(s)	332, 637, 742, 812, 1055
TaiI	ACGT	3 cut(s)	496, 559, 1339
TaqI	TCGA	2 cut(s)	253, 1089
TasI	AATT	8 cut(s)	9, 60, 211, 484, 579, 1103, 1111, 1314
TatI	WGTACW	1 cut(s)	1107
TfiI	GAWTC	5 cut(s)	85, 238, 599, 1026, 1130
Tru1I	TTAA	8 cut(s)	339, 420, 432, 759, 852, 1050, 1214, 1339
Tru9I	TTAA	8 cut(s)	339, 420, 432, 759, 852, 1050, 1214, 1339
TscAI	CASTG	4 cut(s)	335, 463, 544, 817
TseFI	GTSAC	2 cut(s)	97, 517
TseI	GCWGC	5 cut(s)	149, 410, 648, 749, 884
Tsp45I	GTSAC	2 cut(s)	97, 517
TspRI	CASTG	4 cut(s)	335, 463, 544, 817
Vha464I	CTTAAG	1 cut(s)	758
VpaK11BI	GGWCC	2 cut(s)	589, 1180
VspI	ATTAAT	1 cut(s)	432
XapI	RAATTY	3 cut(s)	484, 579, 1314
XhoI	CTCGAG	1 cut(s)	252
XmiI	GTMKAC	3 cut(s)	292, 713, 938
Zsp2I	ATGCAT	2 cut(s)	6, 124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.