RLG00000021193

traB domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0011100
Physical Location & Seq
Reverse (-)
72810398 .. 72812643
2246 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021193

Sequence Viewer

Length: 1203 bp
ATGAATCGCTGGACTCGACTCTACTCGCTCACTTCTCCCCTTAACGCCCTTGCTTTTGCTCCTCGATCGCGAAAAGCACATTTCTTGACCCTACGAAGCCGAAGATTTACGGCATCTGCCACCGCCGGCGATCACGACCGGCTACGGCGCCCGATGGACCCGGGATCATCGACCGTGCCCGACCCGAATTCGGCCGAGGATTTCGTCCACGTCGAGAATTCCCTGGCGGATAGCTTGTCTGATAGCATCGTAAATGTGGAGGTGCCGCGGGAGGAGGACGACGACGGCGACGTTTCGACCAGCGCTGCCGCGGCGGAGGAGGAGGACGACCGGGGGAGGAAGGTCCTCCCGGAGGATCTGTCCCGGAGCGTGGTGGTGCTGACGTGTGAGTCCTCCTCCGAGAGCGGCGTTTGCGACGTGCACCTCGTCGGTACGGCGCATGTTTCCGTGGAATCATGCAGAGAAGTCGAAGCAGTGATAAGTTTTTTGAAACCAGAGGTTGTTTTCTTGGAGTTATGCTCCAGCAGAGTAGCGGTACTTAGTCCTCAGAACTTGAAGGTTCCTACAGCGAGAGAAATGATAGATATGTGGAAGAAGAATCACAATGTCTTTGGAATTGTTTACAGCTGGTTCCTTGCCAAGGTTGCAAGTAAGCTTGAGGTGTTTCCTGGTGCTGAGTTTCGTGTAGCATATGATGAAGCGATGAAGTATGGGGGTAAGGTGGTACTTGGTGATCGTCCAGTGCAGATTACTTTGCGAAGGACATGGGCAAAAATGCCACTTTGGCATAAGATAAAACTAATCTACTCCATACTCTTTCAAGCGGTCTTTTTACCCGATCCTGAAGATCTTAATAAAATGCTAAAGGAAATGGATGATGTTGACATGCTGACCCTTGTGATTCAAGAGATGAGTAAGGAGTTCCCAACTCTAATGGAAACGCTTGTACATGAACGAGATCAGTACATGTCGTCCACATTGCTAAGAATTGCCCAGGAGCATAAGTCAGTAGTTGCAGTGGTAGGGAAGGGGCACCTCCGAGGAATTAATAAGCACTGGAAGCAGCCAGTTGTGGTGACGGATCTTATGGAAATTCCTTCACAAAAGACCGGTATTTCCACAGTCAAAGTTCTTAAATCTTTTGGTATAGTTGTTGCTGGGGCCGCCATAATATCTGGAATATATCTTGCATCTAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TraB

Protein Analysis

401

Amino Acids

44.59

Weight (kDa)

6.29

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TraB_PrgY_gumN PF01963 139 - 355 3.8e-23 TraB/PrgY/gumN family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011100)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05270 AT2G32340 AT2G32340
fragaria_vesca FvH4_6g43520 FvH4_6g43520
malus_domestica MD09G1105400.v1.1 MD17G1093000.v1.1
prunus_persica Prupe.3G220000_v2.0.a1
pyrus_communis pycom09g02840 pycom17g09060
rosa_chinensis RchiOBHm_Chr2g0160041
rosa_laevigata RLG00000021193
rosa_multiflora Rmu_sc0002023.1_g000016
rosa_roxburghii Rroxscaffold_2G00090070
rosa_rugosa Rorug02G0479900
rosa_samantha Rh2AG546500 Rh2BG559900 Rh2CG529900 Rh2DG568600
rosa_wichuraiana Rw2G045190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 388
AccB1I GGYRCC 3 cut(s) 147, 262, 1032
AccBSI CCGCTC 1 cut(s) 405
AccII CGCG 3 cut(s) 70, 268, 311
AclWI GGATC 4 cut(s) 172, 363, 833, 1089
AcoI YGGCCR 1 cut(s) 192
AcsI RAATTY 3 cut(s) 187, 217, 1092
AcuI CTGAAG 1 cut(s) 864
AcyI GRCGYC 1 cut(s) 148
AfaI GTAC 5 cut(s) 433, 537, 726, 948, 965
AfeI AGCGCT 1 cut(s) 304
AfiI CCNNNNNNNGG 4 cut(s) 190, 352, 370, 640
AflIII ACRYGT 2 cut(s) 383, 966
AgeI ACCGGT 1 cut(s) 1109
AgsI TTSAA 4 cut(s) 490, 556, 821, 905
AjiI CACGTC 3 cut(s) 211, 384, 418
AjnI CCWGG 3 cut(s) 222, 667, 993
AluBI AGCT 3 cut(s) 234, 627, 655
AluI AGCT 3 cut(s) 234, 627, 655
Alw21I GWGCWC 1 cut(s) 423
Alw44I GTGCAC 1 cut(s) 419
AlwI GGATC 4 cut(s) 172, 363, 833, 1089
Ama87I CYCGRG 1 cut(s) 160
Aor51HI AGCGCT 1 cut(s) 304
AoxI GGCC 2 cut(s) 192, 1161
ApaLI GTGCAC 1 cut(s) 419
ApeKI GCWGC 2 cut(s) 305, 1063
ApoI RAATTY 3 cut(s) 187, 217, 1092
AseI ATTAAT 1 cut(s) 1047
AsiGI ACCGGT 1 cut(s) 1109
AspLEI GCGC 3 cut(s) 150, 305, 439
AspS9I GGNCC 3 cut(s) 157, 343, 1161
AsuC2I CCSGG 5 cut(s) 161, 162, 332, 350, 364
AsuHPI GGTGA 2 cut(s) 743, 1087
AvaI CYCGRG 1 cut(s) 160
AvaII GGWCC 2 cut(s) 157, 343
BaeGI GKGCMC 3 cut(s) 180, 423, 1035
BanI GGYRCC 3 cut(s) 147, 262, 1032
Bbv12I GWGCWC 1 cut(s) 423
BbvI GCAGC 2 cut(s) 292, 1075
BccI CCATC 1 cut(s) 148
BceAI ACGGC 4 cut(s) 126, 161, 301, 450
BcgI CGANNNNNNTGC 2 cut(s) 448, 482
BciT130I CCWGG 3 cut(s) 224, 669, 995
BcnI CCSGG 5 cut(s) 161, 162, 332, 350, 364
BfmI CTRYAG 1 cut(s) 564
BfoI RGCGCY 2 cut(s) 151, 306
BglI GCCNNNNNGGC 1 cut(s) 784
BglII AGATCT 1 cut(s) 847
BisI GCNGC 7 cut(s) 266, 306, 309, 312, 406, 1064, 1164
BlsI GCNGC 7 cut(s) 267, 307, 310, 313, 407, 1065, 1165
Bme1390I CCNGG 8 cut(s) 161, 162, 224, 332, 350, 364, 669, 995
Bme18I GGWCC 2 cut(s) 157, 343
BmeT110I CYCGRG 1 cut(s) 160
BmgBI CACGTC 3 cut(s) 211, 384, 418
BmgT120I GGNCC 3 cut(s) 157, 343, 1161
BmiI GGNNCC 7 cut(s) 149, 159, 264, 561, 632, 1034, 1162
BmrFI CCNGG 8 cut(s) 161, 162, 224, 332, 350, 364, 669, 995
BmsI GCATC 3 cut(s) 122, 255, 1199
BplI GAGNNNNNCTC 4 cut(s) 380, 412, 503, 535
BpmI CTGGAG 1 cut(s) 505
BpuEI CTTGAG 1 cut(s) 677
BpuMI CCSGG 5 cut(s) 161, 162, 332, 350, 364
BsaHI GRCGYC 1 cut(s) 148
BsaWI WCCGGW 1 cut(s) 1109
BsaXI ACNNNNNCTCC 4 cut(s) 344, 374, 989, 1019
Bsc4I CCNNNNNNNGG 4 cut(s) 190, 352, 370, 640
Bse118I RCCGGY 3 cut(s) 125, 138, 1109
Bse1I ACTGG 3 cut(s) 740, 1061, 1067
Bse3DI GCAATG 1 cut(s) 977
BseBI CCWGG 3 cut(s) 224, 669, 995
BseGI GGATG 1 cut(s) 880
BseLI CCNNNNNNNGG 4 cut(s) 190, 352, 370, 640
BseMI GCAATG 1 cut(s) 977
BseMII CTCAG 2 cut(s) 560, 666
BseNI ACTGG 3 cut(s) 740, 1061, 1067
BseRI GAGGAG 5 cut(s) 51, 287, 332, 335, 385
BseSI GKGCMC 3 cut(s) 180, 423, 1035
BseX3I CGGCCG 1 cut(s) 192
BseXI GCAGC 2 cut(s) 292, 1075
BseYI CCCAGC 1 cut(s) 1157
BsgI GTGCAG 1 cut(s) 764
Bsh1236I CGCG 3 cut(s) 70, 268, 311
Bsh1285I CGRYCG 5 cut(s) 68, 139, 174, 195, 331
BshFI GGCC 2 cut(s) 194, 1163
BshNI GGYRCC 3 cut(s) 147, 262, 1032
BshTI ACCGGT 1 cut(s) 1109
BsiEI CGRYCG 5 cut(s) 68, 139, 174, 195, 331
BsiHKAI GWGCWC 1 cut(s) 423
BsiHKCI CYCGRG 1 cut(s) 160
BsiSI CCGG 7 cut(s) 126, 139, 161, 331, 350, 364, 1110
BslFI GGGAC 1 cut(s) 346
BslI CCNNNNNNNGG 4 cut(s) 190, 352, 370, 640
BsmFI GGGAC 1 cut(s) 346
BsnI GGCC 2 cut(s) 194, 1163
BsoBI CYCGRG 1 cut(s) 160
Bsp1286I GDGCHC 3 cut(s) 180, 423, 1035
Bsp1407I TGTACA 1 cut(s) 946
Bsp143I GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
Bsp68I TCGCGA 1 cut(s) 70
BspANI GGCC 2 cut(s) 194, 1163
BspCNI CTCAG 2 cut(s) 559, 667
BspFNI CGCG 3 cut(s) 70, 268, 311
BspLI GGNNCC 7 cut(s) 149, 159, 264, 561, 632, 1034, 1162
BspPI GGATC 4 cut(s) 172, 363, 833, 1089
BspT107I GGYRCC 3 cut(s) 147, 262, 1032
BsrBI CCGCTC 1 cut(s) 405
BsrDI GCAATG 1 cut(s) 977
BsrFI RCCGGY 3 cut(s) 125, 138, 1109
BsrGI TGTACA 1 cut(s) 946
BsrI ACTGG 3 cut(s) 740, 1061, 1067
BssAI RCCGGY 3 cut(s) 125, 138, 1109
BssMI GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
BssNI GRCGYC 1 cut(s) 148
BssT1I CCWWGG 1 cut(s) 639
Bst2UI CCWGG 3 cut(s) 224, 669, 995
Bst4CI ACNGT 2 cut(s) 175, 1123
BstACI GRCGYC 1 cut(s) 148
BstAUI TGTACA 1 cut(s) 946
BstC8I GCNNGC 1 cut(s) 127
BstDEI CTNAG 5 cut(s) 539, 546, 675, 983, 1194
BstDSI CCRYGG 3 cut(s) 266, 309, 447
BstENI CCTNNNNNAGG 2 cut(s) 350, 638
BstF5I GGATG 1 cut(s) 880
BstFNI CGCG 3 cut(s) 70, 268, 311
BstH2I RGCGCY 2 cut(s) 151, 306
BstHHI GCGC 3 cut(s) 150, 305, 439
BstKTI GATC 9 cut(s) 68, 133, 167, 358, 736, 841, 850, 961, 1084
BstMBI GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
BstMCI CGRYCG 5 cut(s) 68, 139, 174, 195, 331
BstMWI GCNNNNNNNGC 6 cut(s) 311, 411, 644, 784, 1060, 1163
BstNI CCWGG 3 cut(s) 224, 669, 995
BstNSI RCATGY 3 cut(s) 443, 889, 970
BstSCI CCNGG 8 cut(s) 159, 160, 222, 330, 348, 362, 667, 993
BstSFI CTRYAG 1 cut(s) 564
BstSLI GKGCMC 3 cut(s) 180, 423, 1035
BstUI CGCG 3 cut(s) 70, 268, 311
BstV1I GCAGC 2 cut(s) 292, 1075
BstX2I RGATCY 3 cut(s) 355, 847, 1081
BstYI RGATCY 3 cut(s) 355, 847, 1081
BstZI CGGCCG 1 cut(s) 192
BsuRI GGCC 2 cut(s) 194, 1163
BtgI CCRYGG 3 cut(s) 266, 309, 447
BtgZI GCGATG 1 cut(s) 716
BtrI CACGTC 3 cut(s) 211, 384, 418
BtsCI GGATG 1 cut(s) 880
BtsI GCAGTG 2 cut(s) 480, 1023
BtsIMutI CAGTG 4 cut(s) 480, 747, 1023, 1054
BtuMI TCGCGA 1 cut(s) 70
Cac8I GCNNGC 1 cut(s) 127
CfoI GCGC 3 cut(s) 150, 305, 439
Cfr10I RCCGGY 3 cut(s) 125, 138, 1109
Cfr13I GGNCC 3 cut(s) 157, 343, 1161
Cfr42I CCGCGG 2 cut(s) 269, 312
Cfr9I CCCGGG 1 cut(s) 160
Csp6I GTAC 5 cut(s) 432, 536, 725, 947, 964
CspAI ACCGGT 1 cut(s) 1109
CviAII CATG 6 cut(s) 440, 456, 765, 886, 950, 967
CviJI RGCY 8 cut(s) 99, 142, 194, 234, 627, 655, 1066, 1163
CviKI_1 RGCY 8 cut(s) 99, 142, 194, 234, 627, 655, 1066, 1163
CviQI GTAC 5 cut(s) 432, 536, 725, 947, 964
DdeI CTNAG 5 cut(s) 539, 546, 675, 983, 1194
DinI GGCGCC 1 cut(s) 149
DpnI GATC 9 cut(s) 67, 132, 166, 357, 735, 840, 849, 960, 1083
DpnII GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
DrdI GACNNNNNNGTC 1 cut(s) 388
DseDI GACNNNNNNGTC 1 cut(s) 388
EaeI YGGCCR 1 cut(s) 192
EagI CGGCCG 1 cut(s) 192
EciI GGCGGA 2 cut(s) 242, 329
EclXI CGGCCG 1 cut(s) 192
Eco130I CCWWGG 1 cut(s) 639
Eco47I GGWCC 2 cut(s) 157, 343
Eco47III AGCGCT 1 cut(s) 304
Eco52I CGGCCG 1 cut(s) 192
Eco57I CTGAAG 1 cut(s) 864
Eco88I CYCGRG 1 cut(s) 160
EcoNI CCTNNNNNAGG 2 cut(s) 350, 638
EcoO109I RGGNCCY 1 cut(s) 343
EcoRI GAATTC 2 cut(s) 187, 217
EcoRII CCWGG 3 cut(s) 222, 667, 993
EcoT14I CCWWGG 1 cut(s) 639
EgeI GGCGCC 1 cut(s) 149
EheI GGCGCC 1 cut(s) 149
ErhI CCWWGG 1 cut(s) 639
FaeI CATG 6 cut(s) 443, 459, 768, 889, 953, 970
FaqI GGGAC 1 cut(s) 346
FatI CATG 6 cut(s) 439, 455, 764, 885, 949, 966
FauI CCCGC 1 cut(s) 261
FauNDI CATATG 1 cut(s) 691
Fnu4HI GCNGC 7 cut(s) 266, 306, 309, 312, 406, 1064, 1164
FokI GGATG 1 cut(s) 887
Fsp4HI GCNGC 7 cut(s) 266, 306, 309, 312, 406, 1064, 1164
GlaI GCGC 3 cut(s) 149, 304, 438
GluI GCNGC 7 cut(s) 266, 306, 309, 312, 406, 1064, 1164
GsaI CCCAGC 1 cut(s) 1161
GsuI CTGGAG 1 cut(s) 505
HaeII RGCGCY 2 cut(s) 151, 306
HaeIII GGCC 2 cut(s) 194, 1163
HapII CCGG 7 cut(s) 126, 139, 161, 331, 350, 364, 1110
HhaI GCGC 3 cut(s) 150, 305, 439
Hin1I GRCGYC 1 cut(s) 148
Hin1II CATG 6 cut(s) 443, 459, 768, 889, 953, 970
Hin6I GCGC 3 cut(s) 148, 303, 437
HinP1I GCGC 3 cut(s) 148, 303, 437
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HindIII AAGCTT 1 cut(s) 653
HinfI GANTC 7 cut(s) 4, 13, 18, 389, 452, 598, 901
HpaII CCGG 7 cut(s) 126, 139, 161, 331, 350, 364, 1110
HphI GGTGA 2 cut(s) 743, 1087
Hpy166II GTNNAC 5 cut(s) 208, 421, 622, 883, 975
Hpy188I TCNGA 4 cut(s) 241, 400, 549, 1040
Hpy188III TCNNGA 7 cut(s) 69, 85, 134, 214, 842, 905, 1176
Hpy8I GTNNAC 5 cut(s) 208, 421, 622, 883, 975
Hpy99I CGWCG 6 cut(s) 215, 284, 287, 293, 419, 431
HpyAV CCTTC 5 cut(s) 334, 550, 753, 1021, 1107
HpyCH4III ACNGT 2 cut(s) 175, 1123
HpyCH4IV ACGT 4 cut(s) 210, 291, 383, 417
HpyCH4V TGCA 6 cut(s) 421, 459, 647, 745, 1016, 1190
HpyF10VI GCNNNNNNNGC 6 cut(s) 311, 411, 644, 784, 1060, 1163
HpyF3I CTNAG 5 cut(s) 539, 546, 675, 983, 1194
HpySE526I ACGT 4 cut(s) 210, 291, 383, 417
Hsp92I GRCGYC 1 cut(s) 148
Hsp92II CATG 6 cut(s) 443, 459, 768, 889, 953, 970
HspAI GCGC 3 cut(s) 148, 303, 437
KasI GGCGCC 1 cut(s) 147
KroI GCCGGC 1 cut(s) 125
KroNI GCCGGC 1 cut(s) 127
KspI CCGCGG 2 cut(s) 269, 312
Kzo9I GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
LmnI GCTCC 4 cut(s) 64, 366, 524, 997
Lsp1109I GCAGC 2 cut(s) 292, 1075
LweI GCATC 3 cut(s) 122, 255, 1199
MaeII ACGT 4 cut(s) 210, 291, 383, 417
MaeIII GTNAC 1 cut(s) 1075
MalI GATC 9 cut(s) 67, 132, 166, 357, 735, 840, 849, 960, 1083
MbiI CCGCTC 1 cut(s) 405
MboI GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
MboII GAAGA 4 cut(s) 114, 604, 607, 857
MflI RGATCY 3 cut(s) 355, 847, 1081
MhlI GDGCHC 3 cut(s) 180, 423, 1035
MluCI AATT 6 cut(s) 187, 217, 615, 987, 1044, 1092
Mly113I GGCGCC 1 cut(s) 148
MlyI GAGTC 3 cut(s) 7, 12, 398
MreI CGCCGGCG 1 cut(s) 125
MroNI GCCGGC 1 cut(s) 125
MseI TTAA 4 cut(s) 42, 852, 1047, 1134
MspA1I CMGCKG 3 cut(s) 268, 311, 627
MspI CCGG 7 cut(s) 126, 139, 161, 331, 350, 364, 1110
MspR9I CCNGG 8 cut(s) 161, 162, 224, 332, 350, 364, 669, 995
MvaI CCWGG 3 cut(s) 224, 669, 995
MvnI CGCG 3 cut(s) 70, 268, 311
MwoI GCNNNNNNNGC 6 cut(s) 311, 411, 644, 784, 1060, 1163
NaeI GCCGGC 1 cut(s) 127
NarI GGCGCC 1 cut(s) 148
NciI CCSGG 5 cut(s) 161, 162, 332, 350, 364
NdeI CATATG 1 cut(s) 691
NdeII GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
NgoMIV GCCGGC 1 cut(s) 125
NlaIII CATG 6 cut(s) 443, 459, 768, 889, 953, 970
NlaIV GGNNCC 7 cut(s) 149, 159, 264, 561, 632, 1034, 1162
NmeAIII GCCGAG 1 cut(s) 220
NmuCI GTSAC 1 cut(s) 1075
NruI TCGCGA 1 cut(s) 70
NspI RCATGY 3 cut(s) 443, 889, 970
PciI ACATGT 1 cut(s) 966
PcsI WCGNNNNNNNCGW 5 cut(s) 13, 210, 285, 288, 423
PdiI GCCGGC 1 cut(s) 127
PfeI GAWTC 4 cut(s) 4, 452, 598, 901
PfoI TCCNGGA 2 cut(s) 348, 362
PinAI ACCGGT 1 cut(s) 1109
PkrI GCNGC 7 cut(s) 267, 307, 310, 313, 407, 1065, 1165
Ple19I CGATCG 1 cut(s) 68
PleI GAGTC 3 cut(s) 7, 12, 397
PluTI GGCGCC 1 cut(s) 151
PpsI GAGTC 3 cut(s) 7, 12, 397
PpuMI RGGWCCY 1 cut(s) 343
PscI ACATGT 1 cut(s) 966
PshBI ATTAAT 1 cut(s) 1047
Psp5II RGGWCCY 1 cut(s) 343
Psp6I CCWGG 3 cut(s) 222, 667, 993
PspFI CCCAGC 1 cut(s) 1157
PspGI CCWGG 3 cut(s) 222, 667, 993
PspN4I GGNNCC 7 cut(s) 149, 159, 264, 561, 632, 1034, 1162
PspPI GGNCC 3 cut(s) 157, 343, 1161
PspPPI RGGWCCY 1 cut(s) 343
PsuI RGATCY 3 cut(s) 355, 847, 1081
PvuI CGATCG 1 cut(s) 68
PvuII CAGCTG 1 cut(s) 627
RruI TCGCGA 1 cut(s) 70
RsaI GTAC 5 cut(s) 433, 537, 726, 948, 965
RsaNI GTAC 5 cut(s) 432, 536, 725, 947, 964
SacII CCGCGG 2 cut(s) 269, 312
SaqAI TTAA 4 cut(s) 42, 852, 1047, 1134
SatI GCNGC 7 cut(s) 266, 306, 309, 312, 406, 1064, 1164
Sau3AI GATC 9 cut(s) 65, 130, 164, 355, 733, 838, 847, 958, 1081
Sau96I GGNCC 3 cut(s) 157, 343, 1161
SchI GAGTC 3 cut(s) 7, 12, 398
ScrFI CCNGG 8 cut(s) 161, 162, 224, 332, 350, 364, 669, 995
SduI GDGCHC 3 cut(s) 180, 423, 1035
SfaNI GCATC 3 cut(s) 122, 255, 1199
SfcI CTRYAG 1 cut(s) 564
SfoI GGCGCC 1 cut(s) 149
Sfr303I CCGCGG 2 cut(s) 269, 312
SgrAI CRCCGGYG 1 cut(s) 125
SgrBI CCGCGG 2 cut(s) 269, 312
SinI GGWCC 2 cut(s) 157, 343
SmaI CCCGGG 1 cut(s) 162
SmlI CTYRAG 1 cut(s) 656
SmoI CTYRAG 1 cut(s) 656
Sse9I AATT 6 cut(s) 187, 217, 615, 987, 1044, 1092
SspDI GGCGCC 1 cut(s) 147
StyD4I CCNGG 8 cut(s) 159, 160, 222, 330, 348, 362, 667, 993
StyI CCWWGG 1 cut(s) 639
TaaI ACNGT 2 cut(s) 175, 1123
TaiI ACGT 4 cut(s) 213, 294, 386, 420
TaqI TCGA 6 cut(s) 16, 64, 170, 213, 296, 468
TasI AATT 6 cut(s) 187, 217, 615, 987, 1044, 1092
TatI WGTACW 2 cut(s) 946, 963
TauI GCSGC 5 cut(s) 268, 311, 314, 408, 1166
TfiI GAWTC 4 cut(s) 4, 452, 598, 901
Tru1I TTAA 4 cut(s) 42, 852, 1047, 1134
Tru9I TTAA 4 cut(s) 42, 852, 1047, 1134
TscAI CASTG 4 cut(s) 480, 747, 1023, 1061
TseFI GTSAC 1 cut(s) 1075
TseI GCWGC 2 cut(s) 305, 1063
Tsp45I GTSAC 1 cut(s) 1075
TspDTI ATGAA 4 cut(s) 17, 711, 719, 966
TspGWI ACGGA 2 cut(s) 436, 1094
TspMI CCCGGG 1 cut(s) 160
TspRI CASTG 4 cut(s) 480, 747, 1023, 1061
VneI GTGCAC 1 cut(s) 419
VpaK11BI GGWCC 2 cut(s) 157, 343
VspI ATTAAT 1 cut(s) 1047
XagI CCTNNNNNAGG 2 cut(s) 350, 638
XapI RAATTY 3 cut(s) 187, 217, 1092
XceI RCATGY 3 cut(s) 443, 889, 970
XmaI CCCGGG 1 cut(s) 160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.