Rh2CG529900

traB domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0011100
Physical Location & Seq
Reverse (-)
70551199 .. 70553584
2386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG529900.1

Sequence Viewer

Length: 1212 bp
ATGGATGGCTCTTGGATTTCTATGAATCGCTGGACTCGACTCTACTCGCTCACTTTTCCCCTTAACGCCCTTGCTTTCGCTCCTCGATCGCGAAAAGCACAATTCTTGACCCTACGAAACCGAAGATTTACGGCATCTGCCACCGCCGGCGGTCACCACCTGCTACGGCGCCCGATGGACCCGGGATCATCGACCGTGCCCGACCCGAATTCGGCCGAGGATTTCGTCCACGTCGAGAATTCCCTGTCGGATAGCATCGTCAATGTGGAGGTGCCTAGAGAGGAGGAGGACGACGGCGACGTCGTTTCGACCAGCGCTGCCGCGGCGGAGGAGGACGACCGGGGGAGGAAGGTCCTCCCGGAGGATCTGTCCCGGAGCGTGGTGGTGCTGACGTGTGAGTCCTCCGCCGAGGGCGGCGTTTGCGACGTGCACCTCGTCGGAACGGCGCATGTTTCGGTGGAATCATGCAGAGAAGTCGAAGCAGTGATAAGTTTTTTGAAACCAGAGGTTGTTTTCTTGGAGTTATGCTCCAGCAGAGTAGCGGTACTTAGTCCTCAGAACTTGAAGGTTCCTACAGCGAGAGAAATGATAGATATGTGGAAGAAGAATCACAATGTCTTTGGAATTGTTTACAGCTGGTTCCTTGCCAAGGTTGCAAGTAAGCTTGAGGTGTTTCCTGGTGCTGAGTTTCGTGTAGCATATGATGAAGCGATGAAGTATGGGGGTAAGGTGGTACTTGGTGATCGTCCAGTGCAGATTACTTTGCGAAGGACATGGGCAAAAATGCCACTTTGGCATAAGATAAAACTAATCTACTCCATACTCTTTCAAGCGGTCTTTTTACCCGATCCCGAAGATCTTAATAAAATGCTAAAGGAAATGGATGATGTTGACATGCTGACCCTTGTGATTCAAGAGATGAGTAAGGAGTTCCCAACTCTAATGGAAACGCTTGTACATGAACGAGATCAGTACATGTCGTCCACATTACTAAGAATTGCCCGGGAGCATAAGTCAGTAGTTGCAGTGGTAGGAAAGGGGCACCTCCGAGGAATTAATAAGCACTGGAAGCAGCCTGTTGTGCTGACGGATCTTATGGAAATTCCTTCACAAAAGACCGGTATTTCCACAGTCAAAGTTCTTAAATCTTTTGGTGTAGTTGTTGCTGGGGCTGCCATAATATCTGGAATATATCTTGCATCTAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TraB

Protein Analysis

403

Amino Acids

44.95

Weight (kDa)

6.85

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TraB_PrgY_gumN PF01963 139 - 358 4e-23 TraB/PrgY/gumN family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011100)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05270 AT2G32340 AT2G32340
fragaria_vesca FvH4_6g43520 FvH4_6g43520
malus_domestica MD09G1105400.v1.1 MD17G1093000.v1.1
prunus_persica Prupe.3G220000_v2.0.a1
pyrus_communis pycom09g02840 pycom17g09060
rosa_chinensis RchiOBHm_Chr2g0160041
rosa_laevigata RLG00000021193
rosa_multiflora Rmu_sc0002023.1_g000016
rosa_roxburghii Rroxscaffold_2G00090070
rosa_rugosa Rorug02G0479900
rosa_samantha Rh2AG546500 Rh2BG559900 Rh2CG529900 Rh2DG568600
rosa_wichuraiana Rw2G045190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 168
AasI GACNNNNNNGTC 2 cut(s) 299, 397
AatII GACGTC 1 cut(s) 303
Acc36I ACCTGC 1 cut(s) 168
AccB1I GGYRCC 3 cut(s) 168, 271, 1041
AccII CGCG 2 cut(s) 91, 323
AciI CCGC 9 cut(s) 144, 150, 321, 323, 326, 405, 414, 542, 833
AclWI GGATC 4 cut(s) 193, 372, 842, 1098
AcoI YGGCCR 1 cut(s) 213
AcsI RAATTY 3 cut(s) 208, 238, 1101
AcyI GRCGYC 2 cut(s) 169, 300
AfaI GTAC 4 cut(s) 546, 735, 957, 974
AfeI AGCGCT 1 cut(s) 316
AfiI CCNNNNNNNGG 4 cut(s) 211, 361, 379, 649
AflIII ACRYGT 2 cut(s) 392, 975
AgeI ACCGGT 1 cut(s) 1118
AgsI TTSAA 4 cut(s) 499, 565, 830, 914
AjiI CACGTC 3 cut(s) 232, 393, 427
AjnI CCWGG 1 cut(s) 676
AluBI AGCT 2 cut(s) 636, 664
AluI AGCT 2 cut(s) 636, 664
Alw21I GWGCWC 1 cut(s) 432
Alw44I GTGCAC 1 cut(s) 428
AlwI GGATC 4 cut(s) 193, 372, 842, 1098
Ama87I CYCGRG 2 cut(s) 181, 1002
Aor51HI AGCGCT 1 cut(s) 316
AoxI GGCC 1 cut(s) 213
ApaLI GTGCAC 1 cut(s) 428
ApeKI GCWGC 3 cut(s) 317, 1072, 1172
ApoI RAATTY 3 cut(s) 208, 238, 1101
AseI ATTAAT 1 cut(s) 1056
AsiGI ACCGGT 1 cut(s) 1118
AspLEI GCGC 3 cut(s) 171, 317, 448
AspS9I GGNCC 2 cut(s) 178, 352
AsuC2I CCSGG 7 cut(s) 182, 183, 341, 359, 373, 1003, 1004
AsuHPI GGTGA 2 cut(s) 146, 752
AvaI CYCGRG 2 cut(s) 181, 1002
AvaII GGWCC 2 cut(s) 178, 352
BaeGI GKGCMC 3 cut(s) 201, 432, 1044
BanI GGYRCC 3 cut(s) 168, 271, 1041
Bbv12I GWGCWC 1 cut(s) 432
BbvI GCAGC 3 cut(s) 304, 1084, 1159
BccI CCATC 1 cut(s) 169
BceAI ACGGC 4 cut(s) 147, 182, 310, 459
BcgI CGANNNNNNTGC 2 cut(s) 457, 491
BciT130I CCWGG 1 cut(s) 678
BcnI CCSGG 7 cut(s) 182, 183, 341, 359, 373, 1003, 1004
BfaI CTAG 1 cut(s) 276
BfmI CTRYAG 1 cut(s) 573
BfoI RGCGCY 2 cut(s) 172, 318
BfuAI ACCTGC 1 cut(s) 168
BglI GCCNNNNNGGC 1 cut(s) 793
BglII AGATCT 1 cut(s) 856
BisI GCNGC 6 cut(s) 318, 321, 324, 415, 1073, 1173
BlsI GCNGC 6 cut(s) 319, 322, 325, 416, 1074, 1174
Bme1390I CCNGG 8 cut(s) 182, 183, 341, 359, 373, 678, 1003, 1004
Bme18I GGWCC 2 cut(s) 178, 352
BmeT110I CYCGRG 2 cut(s) 181, 1002
BmgBI CACGTC 3 cut(s) 232, 393, 427
BmgT120I GGNCC 2 cut(s) 178, 352
BmiI GGNNCC 6 cut(s) 170, 180, 273, 570, 641, 1043
BmrFI CCNGG 8 cut(s) 182, 183, 341, 359, 373, 678, 1003, 1004
BmsI GCATC 3 cut(s) 143, 264, 1208
BplI GAGNNNNNCTC 2 cut(s) 512, 544
BpmI CTGGAG 1 cut(s) 514
BpuEI CTTGAG 1 cut(s) 686
BpuMI CCSGG 7 cut(s) 182, 183, 341, 359, 373, 1003, 1004
BsaHI GRCGYC 2 cut(s) 169, 300
BsaJI CCNNGG 8 cut(s) 181, 216, 321, 340, 408, 648, 1002, 1048
BsaWI WCCGGW 1 cut(s) 1118
BsaXI ACNNNNNCTCC 4 cut(s) 353, 383, 998, 1028
Bsc4I CCNNNNNNNGG 4 cut(s) 211, 361, 379, 649
Bse118I RCCGGY 2 cut(s) 146, 1118
Bse1I ACTGG 2 cut(s) 749, 1070
BseBI CCWGG 1 cut(s) 678
BseDI CCNNGG 8 cut(s) 181, 216, 321, 340, 408, 648, 1002, 1048
BseGI GGATG 2 cut(s) 10, 889
BseLI CCNNNNNNNGG 4 cut(s) 211, 361, 379, 649
BseMII CTCAG 2 cut(s) 569, 675
BseNI ACTGG 2 cut(s) 749, 1070
BseRI GAGGAG 4 cut(s) 72, 296, 299, 344
BseSI GKGCMC 3 cut(s) 201, 432, 1044
BseX3I CGGCCG 1 cut(s) 213
BseXI GCAGC 3 cut(s) 304, 1084, 1159
BseYI CCCAGC 1 cut(s) 1166
BsgI GTGCAG 1 cut(s) 773
Bsh1236I CGCG 2 cut(s) 91, 323
Bsh1285I CGRYCG 4 cut(s) 89, 195, 216, 340
BshFI GGCC 1 cut(s) 215
BshNI GGYRCC 3 cut(s) 168, 271, 1041
BshTI ACCGGT 1 cut(s) 1118
BsiEI CGRYCG 4 cut(s) 89, 195, 216, 340
BsiHKAI GWGCWC 1 cut(s) 432
BsiHKCI CYCGRG 2 cut(s) 181, 1002
BsiSI CCGG 7 cut(s) 147, 182, 340, 359, 373, 1003, 1119
BslFI GGGAC 1 cut(s) 355
BslI CCNNNNNNNGG 4 cut(s) 211, 361, 379, 649
BsmFI GGGAC 1 cut(s) 355
BsnI GGCC 1 cut(s) 215
BsoBI CYCGRG 2 cut(s) 181, 1002
Bsp1286I GDGCHC 3 cut(s) 201, 432, 1044
Bsp1407I TGTACA 1 cut(s) 955
Bsp143I GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
Bsp68I TCGCGA 1 cut(s) 91
BspACI CCGC 9 cut(s) 144, 150, 321, 323, 326, 405, 414, 542, 833
BspANI GGCC 1 cut(s) 215
BspCNI CTCAG 2 cut(s) 568, 676
BspFNI CGCG 2 cut(s) 91, 323
BspLI GGNNCC 6 cut(s) 170, 180, 273, 570, 641, 1043
BspMI ACCTGC 1 cut(s) 168
BspPI GGATC 4 cut(s) 193, 372, 842, 1098
BspT107I GGYRCC 3 cut(s) 168, 271, 1041
BsrFI RCCGGY 2 cut(s) 146, 1118
BsrGI TGTACA 1 cut(s) 955
BsrI ACTGG 2 cut(s) 749, 1070
BssAI RCCGGY 2 cut(s) 146, 1118
BssECI CCNNGG 8 cut(s) 181, 216, 321, 340, 408, 648, 1002, 1048
BssMI GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
BssNI GRCGYC 2 cut(s) 169, 300
BssT1I CCWWGG 1 cut(s) 648
Bst2UI CCWGG 1 cut(s) 678
Bst4CI ACNGT 2 cut(s) 196, 1132
BstACI GRCGYC 2 cut(s) 169, 300
BstAUI TGTACA 1 cut(s) 955
BstC8I GCNNGC 1 cut(s) 148
BstDEI CTNAG 5 cut(s) 548, 555, 684, 992, 1203
BstDSI CCRYGG 1 cut(s) 321
BstEII GGTNACC 1 cut(s) 152
BstENI CCTNNNNNAGG 2 cut(s) 359, 647
BstF5I GGATG 2 cut(s) 10, 889
BstFNI CGCG 2 cut(s) 91, 323
BstH2I RGCGCY 2 cut(s) 172, 318
BstHHI GCGC 3 cut(s) 171, 317, 448
BstKTI GATC 8 cut(s) 89, 188, 367, 745, 850, 859, 970, 1093
BstMBI GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
BstMCI CGRYCG 4 cut(s) 89, 195, 216, 340
BstMWI GCNNNNNNNGC 7 cut(s) 323, 420, 653, 793, 1069, 1081, 1172
BstNI CCWGG 1 cut(s) 678
BstNSI RCATGY 3 cut(s) 452, 898, 979
BstPI GGTNACC 1 cut(s) 152
BstSCI CCNGG 8 cut(s) 180, 181, 339, 357, 371, 676, 1001, 1002
BstSFI CTRYAG 1 cut(s) 573
BstSLI GKGCMC 3 cut(s) 201, 432, 1044
BstUI CGCG 2 cut(s) 91, 323
BstV1I GCAGC 3 cut(s) 304, 1084, 1159
BstX2I RGATCY 3 cut(s) 364, 856, 1090
BstYI RGATCY 3 cut(s) 364, 856, 1090
BstZI CGGCCG 1 cut(s) 213
BsuRI GGCC 1 cut(s) 215
BtgI CCRYGG 1 cut(s) 321
BtgZI GCGATG 1 cut(s) 725
BtrI CACGTC 3 cut(s) 232, 393, 427
BtsCI GGATG 2 cut(s) 10, 889
BtsI GCAGTG 2 cut(s) 489, 1032
BtsIMutI CAGTG 4 cut(s) 489, 756, 1032, 1063
BtuMI TCGCGA 1 cut(s) 91
BveI ACCTGC 1 cut(s) 168
Cac8I GCNNGC 1 cut(s) 148
CfoI GCGC 3 cut(s) 171, 317, 448
Cfr10I RCCGGY 2 cut(s) 146, 1118
Cfr13I GGNCC 2 cut(s) 178, 352
Cfr42I CCGCGG 1 cut(s) 324
Cfr9I CCCGGG 2 cut(s) 181, 1002
Csp6I GTAC 4 cut(s) 545, 734, 956, 973
CspAI ACCGGT 1 cut(s) 1118
CviAII CATG 6 cut(s) 449, 465, 774, 895, 959, 976
CviJI RGCY 6 cut(s) 9, 215, 636, 664, 1075, 1172
CviKI_1 RGCY 6 cut(s) 9, 215, 636, 664, 1075, 1172
CviQI GTAC 4 cut(s) 545, 734, 956, 973
DdeI CTNAG 5 cut(s) 548, 555, 684, 992, 1203
DinI GGCGCC 1 cut(s) 170
DpnI GATC 8 cut(s) 88, 187, 366, 744, 849, 858, 969, 1092
DpnII GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
DrdI GACNNNNNNGTC 2 cut(s) 299, 397
DseDI GACNNNNNNGTC 2 cut(s) 299, 397
EaeI YGGCCR 1 cut(s) 213
EagI CGGCCG 1 cut(s) 213
EciI GGCGGA 2 cut(s) 341, 394
EclXI CGGCCG 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 648
Eco47I GGWCC 2 cut(s) 178, 352
Eco47III AGCGCT 1 cut(s) 316
Eco52I CGGCCG 1 cut(s) 213
Eco88I CYCGRG 2 cut(s) 181, 1002
Eco91I GGTNACC 1 cut(s) 152
EcoNI CCTNNNNNAGG 2 cut(s) 359, 647
EcoO109I RGGNCCY 1 cut(s) 352
EcoO65I GGTNACC 1 cut(s) 152
EcoRI GAATTC 2 cut(s) 208, 238
EcoRII CCWGG 1 cut(s) 676
EcoT14I CCWWGG 1 cut(s) 648
EgeI GGCGCC 1 cut(s) 170
EheI GGCGCC 1 cut(s) 170
ErhI CCWWGG 1 cut(s) 648
FaeI CATG 6 cut(s) 452, 468, 777, 898, 962, 979
FaqI GGGAC 1 cut(s) 355
FatI CATG 6 cut(s) 448, 464, 773, 894, 958, 975
FauNDI CATATG 1 cut(s) 700
Fnu4HI GCNGC 6 cut(s) 318, 321, 324, 415, 1073, 1173
FokI GGATG 2 cut(s) 17, 896
Fsp4HI GCNGC 6 cut(s) 318, 321, 324, 415, 1073, 1173
FspBI CTAG 1 cut(s) 276
GlaI GCGC 3 cut(s) 170, 316, 447
GluI GCNGC 6 cut(s) 318, 321, 324, 415, 1073, 1173
GsaI CCCAGC 1 cut(s) 1170
GsuI CTGGAG 1 cut(s) 514
HaeII RGCGCY 2 cut(s) 172, 318
HaeIII GGCC 1 cut(s) 215
HapII CCGG 7 cut(s) 147, 182, 340, 359, 373, 1003, 1119
HhaI GCGC 3 cut(s) 171, 317, 448
Hin1I GRCGYC 2 cut(s) 169, 300
Hin1II CATG 6 cut(s) 452, 468, 777, 898, 962, 979
Hin6I GCGC 3 cut(s) 169, 315, 446
HinP1I GCGC 3 cut(s) 169, 315, 446
HincII GTYRAC 1 cut(s) 892
HindII GTYRAC 1 cut(s) 892
HindIII AAGCTT 1 cut(s) 662
HinfI GANTC 7 cut(s) 25, 34, 39, 398, 461, 607, 910
HpaII CCGG 7 cut(s) 147, 182, 340, 359, 373, 1003, 1119
HphI GGTGA 2 cut(s) 146, 752
Hpy166II GTNNAC 5 cut(s) 229, 430, 631, 892, 984
Hpy188I TCNGA 4 cut(s) 250, 440, 558, 1049
Hpy188III TCNNGA 6 cut(s) 90, 106, 235, 851, 914, 1185
Hpy8I GTNNAC 5 cut(s) 229, 430, 631, 892, 984
Hpy99I CGWCG 6 cut(s) 236, 296, 302, 305, 428, 440
HpyAV CCTTC 4 cut(s) 343, 559, 762, 1116
HpyCH4III ACNGT 2 cut(s) 196, 1132
HpyCH4IV ACGT 4 cut(s) 231, 300, 392, 426
HpyCH4V TGCA 6 cut(s) 430, 468, 656, 754, 1025, 1199
HpyF10VI GCNNNNNNNGC 7 cut(s) 323, 420, 653, 793, 1069, 1081, 1172
HpyF3I CTNAG 5 cut(s) 548, 555, 684, 992, 1203
HpySE526I ACGT 4 cut(s) 231, 300, 392, 426
Hsp92I GRCGYC 2 cut(s) 169, 300
Hsp92II CATG 6 cut(s) 452, 468, 777, 898, 962, 979
HspAI GCGC 3 cut(s) 169, 315, 446
KasI GGCGCC 1 cut(s) 168
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
KspI CCGCGG 1 cut(s) 324
Kzo9I GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
LmnI GCTCC 4 cut(s) 85, 375, 533, 1006
Lsp1109I GCAGC 3 cut(s) 304, 1084, 1159
LweI GCATC 3 cut(s) 143, 264, 1208
MaeI CTAG 1 cut(s) 276
MaeII ACGT 4 cut(s) 231, 300, 392, 426
MaeIII GTNAC 1 cut(s) 152
MalI GATC 8 cut(s) 88, 187, 366, 744, 849, 858, 969, 1092
MboI GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
MboII GAAGA 4 cut(s) 135, 613, 616, 866
MflI RGATCY 3 cut(s) 364, 856, 1090
MhlI GDGCHC 3 cut(s) 201, 432, 1044
MluCI AATT 7 cut(s) 101, 208, 238, 624, 996, 1053, 1101
Mly113I GGCGCC 1 cut(s) 169
MlyI GAGTC 3 cut(s) 28, 33, 407
MmeI TCCRAC 2 cut(s) 228, 418
MreI CGCCGGCG 1 cut(s) 146
MroNI GCCGGC 1 cut(s) 146
MseI TTAA 4 cut(s) 63, 861, 1056, 1143
MspA1I CMGCKG 2 cut(s) 323, 636
MspI CCGG 7 cut(s) 147, 182, 340, 359, 373, 1003, 1119
MspR9I CCNGG 8 cut(s) 182, 183, 341, 359, 373, 678, 1003, 1004
MvaI CCWGG 1 cut(s) 678
MvnI CGCG 2 cut(s) 91, 323
MwoI GCNNNNNNNGC 7 cut(s) 323, 420, 653, 793, 1069, 1081, 1172
NaeI GCCGGC 1 cut(s) 148
NarI GGCGCC 1 cut(s) 169
NciI CCSGG 7 cut(s) 182, 183, 341, 359, 373, 1003, 1004
NdeI CATATG 1 cut(s) 700
NdeII GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
NgoMIV GCCGGC 1 cut(s) 146
NlaIII CATG 6 cut(s) 452, 468, 777, 898, 962, 979
NlaIV GGNNCC 6 cut(s) 170, 180, 273, 570, 641, 1043
NmeAIII GCCGAG 2 cut(s) 241, 433
NmuCI GTSAC 1 cut(s) 152
NruI TCGCGA 1 cut(s) 91
NspI RCATGY 3 cut(s) 452, 898, 979
PaqCI CACCTGC 1 cut(s) 168
PciI ACATGT 1 cut(s) 975
PcsI WCGNNNNNNNCGW 5 cut(s) 34, 231, 297, 300, 432
PdiI GCCGGC 1 cut(s) 148
PfeI GAWTC 4 cut(s) 25, 461, 607, 910
PfoI TCCNGGA 2 cut(s) 357, 371
PinAI ACCGGT 1 cut(s) 1118
PkrI GCNGC 6 cut(s) 319, 322, 325, 416, 1074, 1174
Ple19I CGATCG 1 cut(s) 89
PleI GAGTC 3 cut(s) 28, 33, 406
PluTI GGCGCC 1 cut(s) 172
PpsI GAGTC 3 cut(s) 28, 33, 406
PpuMI RGGWCCY 1 cut(s) 352
PscI ACATGT 1 cut(s) 975
PshBI ATTAAT 1 cut(s) 1056
Psp5II RGGWCCY 1 cut(s) 352
Psp6I CCWGG 1 cut(s) 676
PspEI GGTNACC 1 cut(s) 152
PspFI CCCAGC 1 cut(s) 1166
PspGI CCWGG 1 cut(s) 676
PspN4I GGNNCC 6 cut(s) 170, 180, 273, 570, 641, 1043
PspPI GGNCC 2 cut(s) 178, 352
PspPPI RGGWCCY 1 cut(s) 352
PsuI RGATCY 3 cut(s) 364, 856, 1090
PvuI CGATCG 1 cut(s) 89
PvuII CAGCTG 1 cut(s) 636
RruI TCGCGA 1 cut(s) 91
RsaI GTAC 4 cut(s) 546, 735, 957, 974
RsaNI GTAC 4 cut(s) 545, 734, 956, 973
SacII CCGCGG 1 cut(s) 324
SaqAI TTAA 4 cut(s) 63, 861, 1056, 1143
SatI GCNGC 6 cut(s) 318, 321, 324, 415, 1073, 1173
Sau3AI GATC 8 cut(s) 86, 185, 364, 742, 847, 856, 967, 1090
Sau96I GGNCC 2 cut(s) 178, 352
SchI GAGTC 3 cut(s) 28, 33, 407
ScrFI CCNGG 8 cut(s) 182, 183, 341, 359, 373, 678, 1003, 1004
SduI GDGCHC 3 cut(s) 201, 432, 1044
SfaNI GCATC 3 cut(s) 143, 264, 1208
SfcI CTRYAG 1 cut(s) 573
SfoI GGCGCC 1 cut(s) 170
Sfr303I CCGCGG 1 cut(s) 324
SgrAI CRCCGGYG 1 cut(s) 146
SgrBI CCGCGG 1 cut(s) 324
SinI GGWCC 2 cut(s) 178, 352
SmaI CCCGGG 2 cut(s) 183, 1004
SmlI CTYRAG 1 cut(s) 665
SmoI CTYRAG 1 cut(s) 665
Sse9I AATT 7 cut(s) 101, 208, 238, 624, 996, 1053, 1101
SsiI CCGC 9 cut(s) 144, 150, 321, 323, 326, 405, 414, 542, 833
SspDI GGCGCC 1 cut(s) 168
SspMI CTAG 1 cut(s) 276
StyD4I CCNGG 8 cut(s) 180, 181, 339, 357, 371, 676, 1001, 1002
StyI CCWWGG 1 cut(s) 648
TaaI ACNGT 2 cut(s) 196, 1132
TaiI ACGT 4 cut(s) 234, 303, 395, 429
TaqI TCGA 6 cut(s) 37, 85, 191, 234, 308, 477
TasI AATT 7 cut(s) 101, 208, 238, 624, 996, 1053, 1101
TatI WGTACW 2 cut(s) 955, 972
TauI GCSGC 3 cut(s) 323, 326, 417
TfiI GAWTC 4 cut(s) 25, 461, 607, 910
Tru1I TTAA 4 cut(s) 63, 861, 1056, 1143
Tru9I TTAA 4 cut(s) 63, 861, 1056, 1143
TscAI CASTG 4 cut(s) 489, 756, 1032, 1070
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 3 cut(s) 317, 1072, 1172
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 4 cut(s) 38, 720, 728, 975
TspGWI ACGGA 1 cut(s) 1103
TspMI CCCGGG 2 cut(s) 181, 1002
TspRI CASTG 4 cut(s) 489, 756, 1032, 1070
VneI GTGCAC 1 cut(s) 428
VpaK11BI GGWCC 2 cut(s) 178, 352
VspI ATTAAT 1 cut(s) 1056
XagI CCTNNNNNAGG 2 cut(s) 359, 647
XapI RAATTY 3 cut(s) 208, 238, 1101
XceI RCATGY 3 cut(s) 452, 898, 979
XmaI CCCGGG 2 cut(s) 181, 1002
XspI CTAG 1 cut(s) 276
ZraI GACGTC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.