Rh2DG568600

traB domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0011100
Physical Location & Seq
Reverse (-)
79805580 .. 79808152
2573 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG568600.1

Sequence Viewer

Length: 1206 bp
ATGAATCGCTGGACTCGACTCTACTCGCTCACTTCTCCCCTTCACGCCCTTGCTTTCGCTCCTCGATCGCGAAAAGCACAATTCTTGACCCTACGAAACCGAAGATTTACGGCATCTGCCACCGCCGGCGGTCACAACCGGCTACGGCGCGCGATGGACCTTGGATCATCGACCGTGCCCGACCCGAATTCGGCCGAGGATTTCGTCCACGTCGAGAATTCCCTGTCGGATAGCTTGTCTGATAGCATCGTCAATGTGGAGGTGCCTAGAGAGGAGGACGACGACGGCGACGTCGTTTCGACCAGCGCTGCCGCGGCGGAGGAGGAGGACGACCGGGGGAGGAAGGTCCTCCCGGAGGATCTGTCCCGGAGCGTGGTGGTGCTGACGTGTGAGTCCTCCGCCGAGAGCGGCGTTTGCGACGTGCACCTCGTCGGAACGGCGCATGTTTCCGTGGAATCATGCAGAGAAGTCGAAGCAGTGATAAGTTTTTTGAAACCAGAGGTTGTTTTCTTGGAGTTATGCTCCAGCAGAGTAGCGGTACTTAGTCCTCAGAACTTGAAGGTTCCTACAGCGAGAGAAATGATAGATATGTGGAAGAAGAATCACAATGTCTTTGGAATTGTTTACAGCTGGTTCCTTGCCAAGGTTGCATGTAAGCTTGAGGTGTTTCCTGGTGCTGAGTTTCGTGTAGCATATGACGAAGCGATGAAGTATGGGGGTAAGGTGGTACTTGGTGATCGTCCAGTGCAGATTACTTTGCGAAGGACATGGGCAAAAATGCCACTTTGGCATAAGATAAAACTAATCTACTCCATACTCTTTCAAGCGGTTTTTTTACCCGATCCTGAAGATCTTAATAAAATGCTAAAGGAAATGGATGATGTTGACATGCTGACCCTTGTGATTCAAGAGATGAGTAAGGAGTTCCCAACTCTAATGGAAACGCTTGTACATGAACGAGATCAGTACATGTCGTCCACATTACTAAGAATTGCCCGGGAGCATAAGTCAGTAGTTGCAGTGGTAGGGAAGGGGCACCTCCGAGGAATTAGTAAGCACTGGAAGCAGCCTGTTGTGGTGACGGATCTTATGGAAATTCCTTCACAAAAGACCGGTATTTCCACAGTCAAAGTTCTTAAATCTTTTGGTGTAGTTGTTGCTGGGGCCGCCATAATATCTGGAATATATCTTGCATCTAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TraB

Protein Analysis

401

Amino Acids

44.67

Weight (kDa)

6.85

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TraB_PrgY_gumN PF01963 137 - 356 4.5e-22 TraB/PrgY/gumN family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011100)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05270 AT2G32340 AT2G32340
fragaria_vesca FvH4_6g43520 FvH4_6g43520
malus_domestica MD09G1105400.v1.1 MD17G1093000.v1.1
prunus_persica Prupe.3G220000_v2.0.a1
pyrus_communis pycom09g02840 pycom17g09060
rosa_chinensis RchiOBHm_Chr2g0160041
rosa_laevigata RLG00000021193
rosa_multiflora Rmu_sc0002023.1_g000016
rosa_roxburghii Rroxscaffold_2G00090070
rosa_rugosa Rorug02G0479900
rosa_samantha Rh2AG546500 Rh2BG559900 Rh2CG529900 Rh2DG568600
rosa_wichuraiana Rw2G045190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 290, 391
AatII GACGTC 1 cut(s) 294
AccB1I GGYRCC 2 cut(s) 262, 1035
AccBSI CCGCTC 1 cut(s) 408
AccII CGCG 4 cut(s) 70, 150, 152, 314
AclWI GGATC 4 cut(s) 172, 366, 836, 1092
AcoI YGGCCR 1 cut(s) 192
AcsI RAATTY 3 cut(s) 187, 217, 1095
AcuI CTGAAG 1 cut(s) 867
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 4 cut(s) 540, 729, 951, 968
AfeI AGCGCT 1 cut(s) 307
AfiI CCNNNNNNNGG 4 cut(s) 190, 355, 373, 643
AflIII ACRYGT 2 cut(s) 386, 969
AgeI ACCGGT 1 cut(s) 1112
AgsI TTSAA 4 cut(s) 493, 559, 824, 908
AjiI CACGTC 3 cut(s) 211, 387, 421
AjnI CCWGG 1 cut(s) 670
AluBI AGCT 3 cut(s) 234, 630, 658
AluI AGCT 3 cut(s) 234, 630, 658
Alw21I GWGCWC 1 cut(s) 426
Alw44I GTGCAC 1 cut(s) 422
AlwI GGATC 4 cut(s) 172, 366, 836, 1092
Ama87I CYCGRG 1 cut(s) 996
Aor51HI AGCGCT 1 cut(s) 307
AoxI GGCC 2 cut(s) 192, 1164
ApaLI GTGCAC 1 cut(s) 422
ApeKI GCWGC 2 cut(s) 308, 1066
ApoI RAATTY 3 cut(s) 187, 217, 1095
AsiGI ACCGGT 1 cut(s) 1112
AspLEI GCGC 4 cut(s) 150, 152, 308, 442
AspS9I GGNCC 3 cut(s) 157, 346, 1164
AsuC2I CCSGG 5 cut(s) 335, 353, 367, 997, 998
AsuHPI GGTGA 2 cut(s) 746, 1090
AvaI CYCGRG 1 cut(s) 996
AvaII GGWCC 2 cut(s) 157, 346
BaeGI GKGCMC 3 cut(s) 180, 426, 1038
BanI GGYRCC 2 cut(s) 262, 1035
Bbv12I GWGCWC 1 cut(s) 426
BbvI GCAGC 2 cut(s) 295, 1078
BccI CCATC 1 cut(s) 148
BceAI ACGGC 4 cut(s) 126, 161, 301, 453
BcgI CGANNNNNNTGC 2 cut(s) 451, 485
BciT130I CCWGG 1 cut(s) 672
BcnI CCSGG 5 cut(s) 335, 353, 367, 997, 998
BfaI CTAG 1 cut(s) 267
BfmI CTRYAG 1 cut(s) 567
BfoI RGCGCY 1 cut(s) 309
BglI GCCNNNNNGGC 1 cut(s) 787
BglII AGATCT 1 cut(s) 850
BisI GCNGC 6 cut(s) 309, 312, 315, 409, 1067, 1167
BlsI GCNGC 6 cut(s) 310, 313, 316, 410, 1068, 1168
Bme1390I CCNGG 6 cut(s) 335, 353, 367, 672, 997, 998
Bme18I GGWCC 2 cut(s) 157, 346
BmeT110I CYCGRG 1 cut(s) 996
BmgBI CACGTC 3 cut(s) 211, 387, 421
BmgT120I GGNCC 3 cut(s) 157, 346, 1164
BmiI GGNNCC 5 cut(s) 264, 564, 635, 1037, 1165
BmrFI CCNGG 6 cut(s) 335, 353, 367, 672, 997, 998
BmsI GCATC 3 cut(s) 122, 255, 1202
BplI GAGNNNNNCTC 2 cut(s) 506, 538
BpmI CTGGAG 1 cut(s) 508
BpuEI CTTGAG 1 cut(s) 680
BpuMI CCSGG 5 cut(s) 335, 353, 367, 997, 998
BsaHI GRCGYC 1 cut(s) 291
BsaJI CCNNGG 8 cut(s) 160, 195, 312, 334, 450, 642, 996, 1042
BsaWI WCCGGW 1 cut(s) 1112
BsaXI ACNNNNNCTCC 4 cut(s) 347, 377, 992, 1022
Bsc4I CCNNNNNNNGG 4 cut(s) 190, 355, 373, 643
Bse118I RCCGGY 3 cut(s) 125, 138, 1112
Bse1I ACTGG 2 cut(s) 743, 1064
BseBI CCWGG 1 cut(s) 672
BseDI CCNNGG 8 cut(s) 160, 195, 312, 334, 450, 642, 996, 1042
BseGI GGATG 1 cut(s) 883
BseLI CCNNNNNNNGG 4 cut(s) 190, 355, 373, 643
BseMII CTCAG 2 cut(s) 563, 669
BseNI ACTGG 2 cut(s) 743, 1064
BsePI GCGCGC 1 cut(s) 148
BseRI GAGGAG 4 cut(s) 51, 287, 335, 338
BseSI GKGCMC 3 cut(s) 180, 426, 1038
BseX3I CGGCCG 1 cut(s) 192
BseXI GCAGC 2 cut(s) 295, 1078
BseYI CCCAGC 1 cut(s) 1160
BsgI GTGCAG 1 cut(s) 767
Bsh1236I CGCG 4 cut(s) 70, 150, 152, 314
Bsh1285I CGRYCG 4 cut(s) 68, 174, 195, 334
BshFI GGCC 2 cut(s) 194, 1166
BshNI GGYRCC 2 cut(s) 262, 1035
BshTI ACCGGT 1 cut(s) 1112
BsiEI CGRYCG 4 cut(s) 68, 174, 195, 334
BsiHKAI GWGCWC 1 cut(s) 426
BsiHKCI CYCGRG 1 cut(s) 996
BsiSI CCGG 7 cut(s) 126, 139, 334, 353, 367, 997, 1113
BslFI GGGAC 1 cut(s) 349
BslI CCNNNNNNNGG 4 cut(s) 190, 355, 373, 643
BsmFI GGGAC 1 cut(s) 349
BsnI GGCC 2 cut(s) 194, 1166
BsoBI CYCGRG 1 cut(s) 996
Bsp1286I GDGCHC 3 cut(s) 180, 426, 1038
Bsp1407I TGTACA 1 cut(s) 949
Bsp143I GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
Bsp68I TCGCGA 1 cut(s) 70
BspANI GGCC 2 cut(s) 194, 1166
BspCNI CTCAG 2 cut(s) 562, 670
BspFNI CGCG 4 cut(s) 70, 150, 152, 314
BspLI GGNNCC 5 cut(s) 264, 564, 635, 1037, 1165
BspPI GGATC 4 cut(s) 172, 366, 836, 1092
BspT107I GGYRCC 2 cut(s) 262, 1035
BsrBI CCGCTC 1 cut(s) 408
BsrFI RCCGGY 3 cut(s) 125, 138, 1112
BsrGI TGTACA 1 cut(s) 949
BsrI ACTGG 2 cut(s) 743, 1064
BssAI RCCGGY 3 cut(s) 125, 138, 1112
BssECI CCNNGG 8 cut(s) 160, 195, 312, 334, 450, 642, 996, 1042
BssHII GCGCGC 1 cut(s) 148
BssMI GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
BssNI GRCGYC 1 cut(s) 291
BssT1I CCWWGG 2 cut(s) 160, 642
Bst2UI CCWGG 1 cut(s) 672
Bst4CI ACNGT 2 cut(s) 175, 1126
BstACI GRCGYC 1 cut(s) 291
BstAUI TGTACA 1 cut(s) 949
BstC8I GCNNGC 2 cut(s) 127, 150
BstDEI CTNAG 5 cut(s) 542, 549, 678, 986, 1197
BstDSI CCRYGG 2 cut(s) 312, 450
BstENI CCTNNNNNAGG 2 cut(s) 353, 641
BstF5I GGATG 1 cut(s) 883
BstFNI CGCG 4 cut(s) 70, 150, 152, 314
BstH2I RGCGCY 1 cut(s) 309
BstHHI GCGC 4 cut(s) 150, 152, 308, 442
BstKTI GATC 8 cut(s) 68, 167, 361, 739, 844, 853, 964, 1087
BstMBI GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
BstMCI CGRYCG 4 cut(s) 68, 174, 195, 334
BstMWI GCNNNNNNNGC 6 cut(s) 314, 414, 647, 787, 1063, 1166
BstNI CCWGG 1 cut(s) 672
BstNSI RCATGY 4 cut(s) 446, 654, 892, 973
BstSCI CCNGG 6 cut(s) 333, 351, 365, 670, 995, 996
BstSFI CTRYAG 1 cut(s) 567
BstSLI GKGCMC 3 cut(s) 180, 426, 1038
BstUI CGCG 4 cut(s) 70, 150, 152, 314
BstV1I GCAGC 2 cut(s) 295, 1078
BstX2I RGATCY 3 cut(s) 358, 850, 1084
BstYI RGATCY 3 cut(s) 358, 850, 1084
BstZI CGGCCG 1 cut(s) 192
BsuRI GGCC 2 cut(s) 194, 1166
BtgI CCRYGG 2 cut(s) 312, 450
BtgZI GCGATG 2 cut(s) 167, 719
BtrI CACGTC 3 cut(s) 211, 387, 421
BtsCI GGATG 1 cut(s) 883
BtsI GCAGTG 2 cut(s) 483, 1026
BtsIMutI CAGTG 4 cut(s) 483, 750, 1026, 1057
BtuMI TCGCGA 1 cut(s) 70
Cac8I GCNNGC 2 cut(s) 127, 150
CfoI GCGC 4 cut(s) 150, 152, 308, 442
Cfr10I RCCGGY 3 cut(s) 125, 138, 1112
Cfr13I GGNCC 3 cut(s) 157, 346, 1164
Cfr42I CCGCGG 1 cut(s) 315
Cfr9I CCCGGG 1 cut(s) 996
Csp6I GTAC 4 cut(s) 539, 728, 950, 967
CspAI ACCGGT 1 cut(s) 1112
CviAII CATG 7 cut(s) 443, 459, 651, 768, 889, 953, 970
CviJI RGCY 7 cut(s) 142, 194, 234, 630, 658, 1069, 1166
CviKI_1 RGCY 7 cut(s) 142, 194, 234, 630, 658, 1069, 1166
CviQI GTAC 4 cut(s) 539, 728, 950, 967
DdeI CTNAG 5 cut(s) 542, 549, 678, 986, 1197
DpnI GATC 8 cut(s) 67, 166, 360, 738, 843, 852, 963, 1086
DpnII GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
DrdI GACNNNNNNGTC 2 cut(s) 290, 391
DseDI GACNNNNNNGTC 2 cut(s) 290, 391
EaeI YGGCCR 1 cut(s) 192
EagI CGGCCG 1 cut(s) 192
EciI GGCGGA 2 cut(s) 332, 388
EclXI CGGCCG 1 cut(s) 192
Eco130I CCWWGG 2 cut(s) 160, 642
Eco47I GGWCC 2 cut(s) 157, 346
Eco47III AGCGCT 1 cut(s) 307
Eco52I CGGCCG 1 cut(s) 192
Eco57I CTGAAG 1 cut(s) 867
Eco88I CYCGRG 1 cut(s) 996
EcoNI CCTNNNNNAGG 2 cut(s) 353, 641
EcoO109I RGGNCCY 1 cut(s) 346
EcoRI GAATTC 2 cut(s) 187, 217
EcoRII CCWGG 1 cut(s) 670
EcoT14I CCWWGG 2 cut(s) 160, 642
ErhI CCWWGG 2 cut(s) 160, 642
FaeI CATG 7 cut(s) 446, 462, 654, 771, 892, 956, 973
FaqI GGGAC 1 cut(s) 349
FatI CATG 7 cut(s) 442, 458, 650, 767, 888, 952, 969
FauNDI CATATG 1 cut(s) 694
Fnu4HI GCNGC 6 cut(s) 309, 312, 315, 409, 1067, 1167
FokI GGATG 1 cut(s) 890
Fsp4HI GCNGC 6 cut(s) 309, 312, 315, 409, 1067, 1167
FspBI CTAG 1 cut(s) 267
GlaI GCGC 4 cut(s) 149, 151, 307, 441
GluI GCNGC 6 cut(s) 309, 312, 315, 409, 1067, 1167
GsaI CCCAGC 1 cut(s) 1164
GsuI CTGGAG 1 cut(s) 508
HaeII RGCGCY 1 cut(s) 309
HaeIII GGCC 2 cut(s) 194, 1166
HapII CCGG 7 cut(s) 126, 139, 334, 353, 367, 997, 1113
HhaI GCGC 4 cut(s) 150, 152, 308, 442
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 7 cut(s) 446, 462, 654, 771, 892, 956, 973
Hin6I GCGC 4 cut(s) 148, 150, 306, 440
HinP1I GCGC 4 cut(s) 148, 150, 306, 440
HincII GTYRAC 1 cut(s) 886
HindII GTYRAC 1 cut(s) 886
HindIII AAGCTT 1 cut(s) 656
HinfI GANTC 7 cut(s) 4, 13, 18, 392, 455, 601, 904
HpaII CCGG 7 cut(s) 126, 139, 334, 353, 367, 997, 1113
HphI GGTGA 2 cut(s) 746, 1090
Hpy166II GTNNAC 5 cut(s) 208, 424, 625, 886, 978
Hpy188I TCNGA 5 cut(s) 229, 241, 434, 552, 1043
Hpy188III TCNNGA 6 cut(s) 69, 85, 214, 845, 908, 1179
Hpy8I GTNNAC 5 cut(s) 208, 424, 625, 886, 978
Hpy99I CGWCG 7 cut(s) 215, 284, 287, 293, 296, 422, 434
HpyAV CCTTC 6 cut(s) 50, 337, 553, 756, 1024, 1110
HpyCH4III ACNGT 2 cut(s) 175, 1126
HpyCH4IV ACGT 4 cut(s) 210, 291, 386, 420
HpyCH4V TGCA 6 cut(s) 424, 462, 650, 748, 1019, 1193
HpyF10VI GCNNNNNNNGC 6 cut(s) 314, 414, 647, 787, 1063, 1166
HpyF3I CTNAG 5 cut(s) 542, 549, 678, 986, 1197
HpySE526I ACGT 4 cut(s) 210, 291, 386, 420
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 7 cut(s) 446, 462, 654, 771, 892, 956, 973
HspAI GCGC 4 cut(s) 148, 150, 306, 440
KroI GCCGGC 1 cut(s) 125
KroNI GCCGGC 1 cut(s) 127
KspI CCGCGG 1 cut(s) 315
Kzo9I GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
LmnI GCTCC 4 cut(s) 64, 369, 527, 1000
Lsp1109I GCAGC 2 cut(s) 295, 1078
LweI GCATC 3 cut(s) 122, 255, 1202
MaeI CTAG 1 cut(s) 267
MaeII ACGT 4 cut(s) 210, 291, 386, 420
MaeIII GTNAC 2 cut(s) 131, 1078
MalI GATC 8 cut(s) 67, 166, 360, 738, 843, 852, 963, 1086
MbiI CCGCTC 1 cut(s) 408
MboI GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
MboII GAAGA 4 cut(s) 114, 607, 610, 860
MflI RGATCY 3 cut(s) 358, 850, 1084
MhlI GDGCHC 3 cut(s) 180, 426, 1038
MluCI AATT 7 cut(s) 80, 187, 217, 618, 990, 1047, 1095
MlyI GAGTC 3 cut(s) 7, 12, 401
MmeI TCCRAC 2 cut(s) 207, 412
MreI CGCCGGCG 1 cut(s) 125
MroNI GCCGGC 1 cut(s) 125
MseI TTAA 2 cut(s) 855, 1137
MspA1I CMGCKG 2 cut(s) 314, 630
MspI CCGG 7 cut(s) 126, 139, 334, 353, 367, 997, 1113
MspR9I CCNGG 6 cut(s) 335, 353, 367, 672, 997, 998
MvaI CCWGG 1 cut(s) 672
MvnI CGCG 4 cut(s) 70, 150, 152, 314
MwoI GCNNNNNNNGC 6 cut(s) 314, 414, 647, 787, 1063, 1166
NaeI GCCGGC 1 cut(s) 127
NciI CCSGG 5 cut(s) 335, 353, 367, 997, 998
NdeI CATATG 1 cut(s) 694
NdeII GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
NgoMIV GCCGGC 1 cut(s) 125
NlaIII CATG 7 cut(s) 446, 462, 654, 771, 892, 956, 973
NlaIV GGNNCC 5 cut(s) 264, 564, 635, 1037, 1165
NmeAIII GCCGAG 2 cut(s) 220, 427
NmuCI GTSAC 2 cut(s) 131, 1078
NruI TCGCGA 1 cut(s) 70
NspI RCATGY 4 cut(s) 446, 654, 892, 973
PauI GCGCGC 1 cut(s) 148
PciI ACATGT 1 cut(s) 969
PcsI WCGNNNNNNNCGW 6 cut(s) 13, 210, 285, 288, 291, 426
PdiI GCCGGC 1 cut(s) 127
PfeI GAWTC 4 cut(s) 4, 455, 601, 904
PfoI TCCNGGA 2 cut(s) 351, 365
PinAI ACCGGT 1 cut(s) 1112
PkrI GCNGC 6 cut(s) 310, 313, 316, 410, 1068, 1168
Ple19I CGATCG 1 cut(s) 68
PleI GAGTC 3 cut(s) 7, 12, 400
PpsI GAGTC 3 cut(s) 7, 12, 400
PpuMI RGGWCCY 1 cut(s) 346
PscI ACATGT 1 cut(s) 969
Psp5II RGGWCCY 1 cut(s) 346
Psp6I CCWGG 1 cut(s) 670
PspFI CCCAGC 1 cut(s) 1160
PspGI CCWGG 1 cut(s) 670
PspN4I GGNNCC 5 cut(s) 264, 564, 635, 1037, 1165
PspPI GGNCC 3 cut(s) 157, 346, 1164
PspPPI RGGWCCY 1 cut(s) 346
PsuI RGATCY 3 cut(s) 358, 850, 1084
PteI GCGCGC 1 cut(s) 148
PvuI CGATCG 1 cut(s) 68
PvuII CAGCTG 1 cut(s) 630
RruI TCGCGA 1 cut(s) 70
RsaI GTAC 4 cut(s) 540, 729, 951, 968
RsaNI GTAC 4 cut(s) 539, 728, 950, 967
SacII CCGCGG 1 cut(s) 315
SaqAI TTAA 2 cut(s) 855, 1137
SatI GCNGC 6 cut(s) 309, 312, 315, 409, 1067, 1167
Sau3AI GATC 8 cut(s) 65, 164, 358, 736, 841, 850, 961, 1084
Sau96I GGNCC 3 cut(s) 157, 346, 1164
SchI GAGTC 3 cut(s) 7, 12, 401
ScrFI CCNGG 6 cut(s) 335, 353, 367, 672, 997, 998
SduI GDGCHC 3 cut(s) 180, 426, 1038
SfaNI GCATC 3 cut(s) 122, 255, 1202
SfcI CTRYAG 1 cut(s) 567
Sfr303I CCGCGG 1 cut(s) 315
SgrAI CRCCGGYG 1 cut(s) 125
SgrBI CCGCGG 1 cut(s) 315
SinI GGWCC 2 cut(s) 157, 346
SmaI CCCGGG 1 cut(s) 998
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
Sse9I AATT 7 cut(s) 80, 187, 217, 618, 990, 1047, 1095
SspMI CTAG 1 cut(s) 267
StyD4I CCNGG 6 cut(s) 333, 351, 365, 670, 995, 996
StyI CCWWGG 2 cut(s) 160, 642
TaaI ACNGT 2 cut(s) 175, 1126
TaiI ACGT 4 cut(s) 213, 294, 389, 423
TaqI TCGA 6 cut(s) 16, 64, 170, 213, 299, 471
TasI AATT 7 cut(s) 80, 187, 217, 618, 990, 1047, 1095
TatI WGTACW 2 cut(s) 949, 966
TauI GCSGC 4 cut(s) 314, 317, 411, 1169
TfiI GAWTC 4 cut(s) 4, 455, 601, 904
Tru1I TTAA 2 cut(s) 855, 1137
Tru9I TTAA 2 cut(s) 855, 1137
TscAI CASTG 4 cut(s) 483, 750, 1026, 1064
TseFI GTSAC 2 cut(s) 131, 1078
TseI GCWGC 2 cut(s) 308, 1066
Tsp45I GTSAC 2 cut(s) 131, 1078
TspDTI ATGAA 3 cut(s) 17, 722, 969
TspGWI ACGGA 2 cut(s) 439, 1097
TspMI CCCGGG 1 cut(s) 996
TspRI CASTG 4 cut(s) 483, 750, 1026, 1064
VneI GTGCAC 1 cut(s) 422
VpaK11BI GGWCC 2 cut(s) 157, 346
XagI CCTNNNNNAGG 2 cut(s) 353, 641
XapI RAATTY 3 cut(s) 187, 217, 1095
XceI RCATGY 4 cut(s) 446, 654, 892, 973
XmaI CCCGGG 1 cut(s) 996
XspI CTAG 1 cut(s) 267
ZraI GACGTC 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.