RLG00000022328

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
82625586 .. 82626848
1263 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022328

Sequence Viewer

Length: 1263 bp
ATGTCCAAAGAAAGCAGGGATTCTAACCTGGGTGGTTTTGGGCTAGGTTACCATACCAGTCCTCCAGAAAAGGTTAGGAGAAGATCAAGCATGAGCAGCAGCTTTGATGGAGTTTCATTTTCATCCAAGGAGCTCATGCAGCTTGATTGTGCCTTAACCTTATCATTGGGTACTAATATAGTGCCTAAACCGAAGGATGCAGATTATTGTTACTCAATCCCTCCCCTCATTGAAGAGGTGGAGGCGTTGATCTTGGCCCGGGCTCCCAGGTCTGAGTACTGGAAGTTCTTCTTGGTGAACAAGCGCTTCTTGGCACTTTTGAAGAGTGGAGAGCTGTACAAGATCAGGAGTGAACTCGGGCTCAAAGAGCTGTCTATTTTCGTGTCGCCTTGCGGGGAGAGAAAATGGTGGGAATTCGACAGGCAGTTCAAGTCCTGCAGGAAGCTCCCTATCTTACCCGCGGATGAAACTTTCATACGCGGTGATAGGGAATCGCTTTGTGCAGGGACTCATCTGCTAGTCTCCGGCAGAGAAATTGAGGGGCTTGTTGTGTGGAGGTATGATATGGAAGCAAACATTTGGTCAAGGGGTCCTTCAATGATCAATCCAAGGTGCTTGTTTGCTTCTGCTACATGTGGTTCCTATGGATATGTAGCCGGTGGGTTTGGAATGGTAGCAACAGGCTGGGAAGTTATGGATTTCGCTGAGAGATACATTCCGGAGACTAAATCCTGGGAGCCTCTTCCAAATATGATCAAAAAGAGAAGGTATTGCTCTGGCTGTTACATGGACAACAAGTTTTATGTGATTGGCGGGAGAGACCCTGATGGAAGAGATCTCAGTTGCGCAGAAGCCTTTGATATGGAGAAGAAGACATGGGAACTGATCCCAGACATGTTAGAAGTAGATGATGCTCAAGACCAAGCTTTGAATAACCAATCCCCGCCTCTCGTTGCGGCTGTGAACAACGAGCTCTACTCACTCGAAACCCGCACAAATGAGCTCAAGGTGTATATGAAGAGAAGCAAATCATGGAAGAAGTTGGGATCTGTTCCAGTGAGAGCTGATACTACTCTAGGATGGGGAATAGCTTTTAAGTCGCTGGGGAATGAGTTACTTGTCATACAATCTTCACAATATGGCCCTTCTCTGCTATACACTTGCTGCCCTAATCCAAATGCTGAGGAGTTGCAGTGGGAAGCTCTTGAACATGGCAAAAACCCTACCTGCTTCATCGTTAATTGTTCTGTCATGGCAGCTTGA

Protein Analysis

421

Amino Acids

47.39

Weight (kDa)

6.12

Isoelectric Point (pI)

47.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_Calicin PF13964 184 - 299 9.9e-09 Calicin, beta-propeller domain
Kelch_1 PF01344 203 - 251 8.3e-06 Kelch motif
Kelch_FKB95 PF25210 242 - 298 6.8e-10 FKB95, Kelch-repeats domain
Kelch_1 PF01344 255 - 299 8.7e-13 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 847
Acc36I ACCTGC 1 cut(s) 1235
AccII CGCG 2 cut(s) 461, 480
AccIII TCCGGA 1 cut(s) 718
AciI CCGC 8 cut(s) 393, 459, 461, 480, 813, 944, 956, 991
AclWI GGATC 2 cut(s) 880, 1054
AcsI RAATTY 1 cut(s) 413
AfaI GTAC 3 cut(s) 172, 278, 338
AfeI AGCGCT 1 cut(s) 305
AflIII ACRYGT 2 cut(s) 632, 894
AgsI TTSAA 6 cut(s) 233, 322, 430, 597, 931, 1208
AjnI CCWGG 3 cut(s) 27, 266, 731
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
Alw21I GWGCWC 3 cut(s) 135, 975, 1005
Alw26I GTCTC 3 cut(s) 526, 716, 813
AlwI GGATC 2 cut(s) 880, 1054
Ama87I CYCGRG 2 cut(s) 258, 356
Aor13HI TCCGGA 1 cut(s) 718
Aor51HI AGCGCT 1 cut(s) 305
AoxI GGCC 2 cut(s) 255, 1141
ApeKI GCWGC 5 cut(s) 96, 99, 139, 1164, 1256
ApoI RAATTY 1 cut(s) 413
ArsI GACNNNNNNTTYG 2 cut(s) 566, 598
Asp700I GAANNNNTTC 1 cut(s) 287
AspLEI GCGC 2 cut(s) 306, 848
AspS9I GGNCC 3 cut(s) 256, 590, 1142
AsuC2I CCSGG 2 cut(s) 259, 260
AsuHPI GGTGA 2 cut(s) 307, 494
AvaI CYCGRG 2 cut(s) 258, 356
AvaII GGWCC 1 cut(s) 590
BanII GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
BbsI GAAGAC 1 cut(s) 878
Bbv12I GWGCWC 3 cut(s) 135, 975, 1005
BbvCI CCTCAGC 1 cut(s) 1182
BbvI GCAGC 4 cut(s) 108, 111, 151, 1151
BccI CCATC 3 cut(s) 101, 821, 1074
BciT130I CCWGG 3 cut(s) 29, 268, 733
BclI TGATCA 2 cut(s) 600, 753
BcnI CCSGG 2 cut(s) 259, 260
BcoDI GTCTC 3 cut(s) 526, 716, 813
BfaI CTAG 3 cut(s) 44, 518, 1076
BfmI CTRYAG 1 cut(s) 436
BfoI RGCGCY 1 cut(s) 307
BfuAI ACCTGC 1 cut(s) 1235
BglII AGATCT 1 cut(s) 835
BisI GCNGC 6 cut(s) 97, 100, 140, 957, 1165, 1257
BlsI GCNGC 6 cut(s) 98, 101, 141, 958, 1166, 1258
BmcAI AGTACT 1 cut(s) 278
Bme1390I CCNGG 5 cut(s) 29, 259, 260, 268, 733
Bme18I GGWCC 1 cut(s) 590
BmeT110I CYCGRG 2 cut(s) 258, 356
BmgT120I GGNCC 3 cut(s) 256, 590, 1142
BmiI GGNNCC 4 cut(s) 264, 591, 640, 738
BmrFI CCNGG 5 cut(s) 29, 259, 260, 268, 733
BmsI GCATC 2 cut(s) 187, 901
BpiI GAAGAC 1 cut(s) 878
BplI GAGNNNNNCTC 2 cut(s) 962, 994
BpmI CTGGAG 1 cut(s) 48
Bpu10I CCTNAGC 1 cut(s) 1182
BpuEI CTTGAG 2 cut(s) 900, 989
BpuMI CCSGG 2 cut(s) 259, 260
BsaI GGTCTC 1 cut(s) 813
BsaJI CCNNGG 7 cut(s) 28, 126, 258, 266, 459, 608, 732
BsaWI WCCGGW 1 cut(s) 718
BsaXI ACNNNNNCTCC 4 cut(s) 46, 76, 1178, 1208
Bse118I RCCGGY 1 cut(s) 656
Bse1I ACTGG 3 cut(s) 57, 284, 1055
BseAI TCCGGA 1 cut(s) 718
BseBI CCWGG 3 cut(s) 29, 268, 733
BseDI CCNNGG 7 cut(s) 28, 126, 258, 266, 459, 608, 732
BseGI GGATG 4 cut(s) 122, 202, 469, 1085
BseMII CTCAG 4 cut(s) 264, 696, 853, 1173
BseNI ACTGG 3 cut(s) 57, 284, 1055
BseRI GAGGAG 1 cut(s) 1199
BseXI GCAGC 4 cut(s) 108, 111, 151, 1151
BseYI CCCAGC 2 cut(s) 684, 1102
BsgI GTGCAG 1 cut(s) 522
Bsh1236I CGCG 2 cut(s) 461, 480
BshFI GGCC 2 cut(s) 257, 1143
BsiHKAI GWGCWC 3 cut(s) 135, 975, 1005
BsiHKCI CYCGRG 2 cut(s) 258, 356
BsiSI CCGG 4 cut(s) 259, 525, 657, 719
BslFI GGGAC 1 cut(s) 520
BsmAI GTCTC 3 cut(s) 526, 716, 813
BsmFI GGGAC 1 cut(s) 520
BsnI GGCC 2 cut(s) 257, 1143
Bso31I GGTCTC 1 cut(s) 813
BsoBI CYCGRG 2 cut(s) 258, 356
Bsp1286I GDGCHC 5 cut(s) 135, 265, 363, 975, 1005
Bsp13I TCCGGA 1 cut(s) 718
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
BspACI CCGC 8 cut(s) 393, 459, 461, 480, 813, 944, 956, 991
BspANI GGCC 2 cut(s) 257, 1143
BspCNI CTCAG 4 cut(s) 265, 697, 852, 1174
BspEI TCCGGA 1 cut(s) 718
BspFNI CGCG 2 cut(s) 461, 480
BspLI GGNNCC 4 cut(s) 264, 591, 640, 738
BspMAI CTGCAG 1 cut(s) 440
BspMI ACCTGC 1 cut(s) 1235
BspPI GGATC 2 cut(s) 880, 1054
BspTNI GGTCTC 1 cut(s) 813
BsrFI RCCGGY 1 cut(s) 656
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 3 cut(s) 57, 284, 1055
BssAI RCCGGY 1 cut(s) 656
BssECI CCNNGG 7 cut(s) 28, 126, 258, 266, 459, 608, 732
BssMI GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
BssT1I CCWWGG 2 cut(s) 126, 608
Bst2UI CCWGG 3 cut(s) 29, 268, 733
Bst6I CTCTTC 5 cut(s) 228, 317, 747, 826, 1013
BstAUI TGTACA 1 cut(s) 336
BstDEI CTNAG 4 cut(s) 273, 705, 839, 1182
BstDSI CCRYGG 1 cut(s) 459
BstEII GGTNACC 1 cut(s) 47
BstF5I GGATG 4 cut(s) 122, 202, 469, 1085
BstFNI CGCG 2 cut(s) 461, 480
BstH2I RGCGCY 1 cut(s) 307
BstHHI GCGC 2 cut(s) 306, 848
BstKTI GATC 8 cut(s) 86, 252, 345, 603, 756, 838, 888, 1049
BstMAI GTCTC 3 cut(s) 526, 716, 813
BstMBI GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
BstMWI GCNNNNNNNGC 3 cut(s) 96, 139, 367
BstNI CCWGG 3 cut(s) 29, 268, 733
BstNSI RCATGY 2 cut(s) 636, 898
BstPI GGTNACC 1 cut(s) 47
BstSCI CCNGG 5 cut(s) 27, 257, 258, 266, 731
BstSFI CTRYAG 1 cut(s) 436
BstUI CGCG 2 cut(s) 461, 480
BstV1I GCAGC 4 cut(s) 108, 111, 151, 1151
BstV2I GAAGAC 1 cut(s) 878
BstX2I RGATCY 2 cut(s) 835, 1046
BstYI RGATCY 2 cut(s) 835, 1046
BsuRI GGCC 2 cut(s) 257, 1143
BtgI CCRYGG 1 cut(s) 459
BtsCI GGATG 4 cut(s) 122, 202, 469, 1085
BtsI GCAGTG 1 cut(s) 1199
BtsIMutI CAGTG 2 cut(s) 1062, 1199
BveI ACCTGC 1 cut(s) 1235
CfoI GCGC 2 cut(s) 306, 848
Cfr10I RCCGGY 1 cut(s) 656
Cfr13I GGNCC 3 cut(s) 256, 590, 1142
Cfr42I CCGCGG 1 cut(s) 462
Cfr9I CCCGGG 1 cut(s) 258
Csp6I GTAC 3 cut(s) 171, 277, 337
CviAII CATG 9 cut(s) 91, 136, 633, 787, 876, 895, 1032, 1211, 1252
CviQI GTAC 3 cut(s) 171, 277, 337
DdeI CTNAG 4 cut(s) 273, 705, 839, 1182
DpnI GATC 8 cut(s) 85, 251, 344, 602, 755, 837, 887, 1048
DpnII GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
Eam1104I CTCTTC 5 cut(s) 228, 317, 747, 826, 1013
EarI CTCTTC 5 cut(s) 228, 317, 747, 826, 1013
Ecl136II GAGCTC 3 cut(s) 133, 973, 1003
Eco130I CCWWGG 2 cut(s) 126, 608
Eco24I GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
Eco31I GGTCTC 1 cut(s) 813
Eco47I GGWCC 1 cut(s) 590
Eco47III AGCGCT 1 cut(s) 305
Eco53kI GAGCTC 3 cut(s) 133, 973, 1003
Eco88I CYCGRG 2 cut(s) 258, 356
Eco91I GGTNACC 1 cut(s) 47
EcoICRI GAGCTC 3 cut(s) 133, 973, 1003
EcoO109I RGGNCCY 1 cut(s) 590
EcoO65I GGTNACC 1 cut(s) 47
EcoRI GAATTC 1 cut(s) 413
EcoRII CCWGG 3 cut(s) 27, 266, 731
EcoT14I CCWWGG 2 cut(s) 126, 608
EcoT38I GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
ErhI CCWWGG 2 cut(s) 126, 608
FaeI CATG 9 cut(s) 94, 139, 636, 790, 879, 898, 1035, 1214, 1255
FalI AAGNNNNNCTT 6 cut(s) 275, 307, 293, 325, 577, 609
FaqI GGGAC 1 cut(s) 520
FatI CATG 9 cut(s) 90, 135, 632, 786, 875, 894, 1031, 1210, 1251
FauI CCCGC 5 cut(s) 386, 466, 806, 951, 998
FbaI TGATCA 2 cut(s) 600, 753
Fnu4HI GCNGC 6 cut(s) 97, 100, 140, 957, 1165, 1257
FokI GGATG 4 cut(s) 109, 209, 476, 1092
FriOI GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
Fsp4HI GCNGC 6 cut(s) 97, 100, 140, 957, 1165, 1257
FspBI CTAG 3 cut(s) 44, 518, 1076
FspI TGCGCA 1 cut(s) 847
GlaI GCGC 2 cut(s) 305, 847
GluI GCNGC 6 cut(s) 97, 100, 140, 957, 1165, 1257
GsaI CCCAGC 2 cut(s) 688, 1106
GsuI CTGGAG 1 cut(s) 48
HaeII RGCGCY 1 cut(s) 307
HaeIII GGCC 2 cut(s) 257, 1143
HapII CCGG 4 cut(s) 259, 525, 657, 719
HhaI GCGC 2 cut(s) 306, 848
Hin1II CATG 9 cut(s) 94, 139, 636, 790, 879, 898, 1035, 1214, 1255
Hin6I GCGC 2 cut(s) 304, 846
HinP1I GCGC 2 cut(s) 304, 846
HindIII AAGCTT 1 cut(s) 924
HinfI GANTC 3 cut(s) 20, 491, 508
HpaII CCGG 4 cut(s) 259, 525, 657, 719
HphI GGTGA 2 cut(s) 307, 494
Hpy166II GTNNAC 3 cut(s) 298, 353, 964
Hpy188I TCNGA 1 cut(s) 274
Hpy188III TCNNGA 5 cut(s) 65, 346, 719, 917, 1205
Hpy8I GTNNAC 3 cut(s) 298, 353, 964
HpyAV CCTTC 4 cut(s) 187, 603, 759, 1155
HpyCH4V TGCA 5 cut(s) 139, 200, 438, 503, 1192
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 139, 367
HpyF3I CTNAG 4 cut(s) 273, 705, 839, 1182
Hsp92II CATG 9 cut(s) 94, 139, 636, 790, 879, 898, 1035, 1214, 1255
HspAI GCGC 2 cut(s) 304, 846
Kpn2I TCCGGA 1 cut(s) 718
Ksp22I TGATCA 2 cut(s) 600, 753
KspI CCGCGG 1 cut(s) 462
Kzo9I GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
LmnI GCTCC 4 cut(s) 130, 268, 450, 736
Lsp1109I GCAGC 4 cut(s) 108, 111, 151, 1151
LweI GCATC 2 cut(s) 187, 901
MaeI CTAG 3 cut(s) 44, 518, 1076
MaeIII GTNAC 4 cut(s) 47, 209, 782, 1113
MalI GATC 8 cut(s) 85, 251, 344, 602, 755, 837, 887, 1048
MboI GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
MflI RGATCY 2 cut(s) 835, 1046
MhlI GDGCHC 5 cut(s) 135, 265, 363, 975, 1005
MluCI AATT 3 cut(s) 413, 534, 1240
MlyI GAGTC 1 cut(s) 502
MroI TCCGGA 1 cut(s) 718
MroXI GAANNNNTTC 1 cut(s) 287
MseI TTAA 3 cut(s) 155, 1095, 1239
MspA1I CMGCKG 1 cut(s) 461
MspI CCGG 4 cut(s) 259, 525, 657, 719
MspR9I CCNGG 5 cut(s) 29, 259, 260, 268, 733
MvaI CCWGG 3 cut(s) 29, 268, 733
MvnI CGCG 2 cut(s) 461, 480
MwoI GCNNNNNNNGC 3 cut(s) 96, 139, 367
NciI CCSGG 2 cut(s) 259, 260
NdeII GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
NlaIII CATG 9 cut(s) 94, 139, 636, 790, 879, 898, 1035, 1214, 1255
NlaIV GGNNCC 4 cut(s) 264, 591, 640, 738
NsbI TGCGCA 1 cut(s) 847
NspI RCATGY 2 cut(s) 636, 898
PciI ACATGT 2 cut(s) 632, 894
PdmI GAANNNNTTC 1 cut(s) 287
PfeI GAWTC 2 cut(s) 20, 491
PkrI GCNGC 6 cut(s) 98, 101, 141, 958, 1166, 1258
PleI GAGTC 1 cut(s) 502
PpsI GAGTC 1 cut(s) 502
PpuMI RGGWCCY 1 cut(s) 590
PscI ACATGT 2 cut(s) 632, 894
Psp124BI GAGCTC 3 cut(s) 135, 975, 1005
Psp5II RGGWCCY 1 cut(s) 590
Psp6I CCWGG 3 cut(s) 27, 266, 731
PspEI GGTNACC 1 cut(s) 47
PspFI CCCAGC 2 cut(s) 684, 1102
PspGI CCWGG 3 cut(s) 27, 266, 731
PspN4I GGNNCC 4 cut(s) 264, 591, 640, 738
PspPI GGNCC 3 cut(s) 256, 590, 1142
PspPPI RGGWCCY 1 cut(s) 590
PsrI GAACNNNNNNTAC 2 cut(s) 269, 301
PstI CTGCAG 1 cut(s) 440
PsuI RGATCY 2 cut(s) 835, 1046
RsaI GTAC 3 cut(s) 172, 278, 338
RsaNI GTAC 3 cut(s) 171, 277, 337
SacI GAGCTC 3 cut(s) 135, 975, 1005
SacII CCGCGG 1 cut(s) 462
SaqAI TTAA 3 cut(s) 155, 1095, 1239
SatI GCNGC 6 cut(s) 97, 100, 140, 957, 1165, 1257
Sau3AI GATC 8 cut(s) 83, 249, 342, 600, 753, 835, 885, 1046
Sau96I GGNCC 3 cut(s) 256, 590, 1142
SbfI CCTGCAGG 1 cut(s) 440
ScaI AGTACT 1 cut(s) 278
SchI GAGTC 1 cut(s) 502
ScrFI CCNGG 5 cut(s) 29, 259, 260, 268, 733
SdaI CCTGCAGG 1 cut(s) 440
SduI GDGCHC 5 cut(s) 135, 265, 363, 975, 1005
SfaNI GCATC 2 cut(s) 187, 901
SfcI CTRYAG 1 cut(s) 436
Sfr303I CCGCGG 1 cut(s) 462
SgrBI CCGCGG 1 cut(s) 462
SinI GGWCC 1 cut(s) 590
SmaI CCCGGG 1 cut(s) 260
SmlI CTYRAG 2 cut(s) 915, 1004
SmoI CTYRAG 2 cut(s) 915, 1004
SrfI GCCCGGGC 1 cut(s) 260
Sse8387I CCTGCAGG 1 cut(s) 440
Sse9I AATT 3 cut(s) 413, 534, 1240
SsiI CCGC 8 cut(s) 393, 459, 461, 480, 813, 944, 956, 991
SspMI CTAG 3 cut(s) 44, 518, 1076
SstI GAGCTC 3 cut(s) 135, 975, 1005
StyD4I CCNGG 5 cut(s) 27, 257, 258, 266, 731
StyI CCWWGG 2 cut(s) 126, 608
TaqI TCGA 2 cut(s) 417, 984
TasI AATT 3 cut(s) 413, 534, 1240
TatI WGTACW 2 cut(s) 276, 336
TauI GCSGC 1 cut(s) 959
TfiI GAWTC 2 cut(s) 20, 491
Tru1I TTAA 3 cut(s) 155, 1095, 1239
Tru9I TTAA 3 cut(s) 155, 1095, 1239
TscAI CASTG 2 cut(s) 1062, 1199
TseI GCWGC 5 cut(s) 96, 99, 139, 1164, 1256
TspDTI ATGAA 6 cut(s) 105, 111, 463, 480, 1031, 1222
TspMI CCCGGG 1 cut(s) 258
TspRI CASTG 2 cut(s) 1062, 1199
VpaK11BI GGWCC 1 cut(s) 590
XapI RAATTY 1 cut(s) 413
XceI RCATGY 2 cut(s) 636, 898
XmaI CCCGGG 1 cut(s) 258
XmnI GAANNNNTTC 1 cut(s) 287
XspI CTAG 3 cut(s) 44, 518, 1076
ZrmI AGTACT 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.