Rh2AG664300

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
87971536 .. 87973217
1682 bp
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UTR
Exon/CDS
Intron
Rh2AG664300.1

Sequence Viewer

Length: 1263 bp
ATGTCCAAAGAAAGCAGGGATTCTAACCTGGGTGATTTTGGGCTAGGTTATCATACCAGCCCTCCAGAAAAGGTTAGGAGAAGATCAAGCATGAGCAGCAGCTTTGATGGAGATTCATTTTCGTCCAAGGAGCTCATGCAGCTTGATTGTGCCTTAACCTTATCACTGGGTACTAATATAGTGCCTAAACCGAAGGATGCAGATTATTGTTACTCAATCCCTCCCCTCATTGAAGAGGTGGAGGCGTTGATCTTGGCCCGGGCTCCCAGGTCTGAGTACTGGAAGTTCTTCTTGGTGAACAAGCGCTTCTTGGCACTTTTGAAGAGTGGAGAGCTGTACAAGATCAGGAGTGAACTCGGGCTCAAAGAGCTGTCTATTTTCGTGTCCCCTTGCGGGGAGAGAAAATGGTGGGAATTCGACAGGCAGTTCAAGTCCTGCAGGAAGCTCCCTATCTTACCCGCGGATGAAACTTTCATCCGCGGTGATAGGGAATCGCTTTGTGCAGGGACTCATCTGCTAGTCTCTGGCAGAGAAATTGAGGGGCTTGTTGTGTGGAGGTATGATATGGAAGAAAACATTTGGTCAAGGGGTCCTTCCATGATCAATCCAAGGTGCTTGTTTGCTTCTGCTACATGTGGTTCCTATGGATATGTAGCCGGTGGGTTTGGAATGGTAGCAACAGGTTGGGAAGTTATGGATTTCGCCGAGAGATACATTCCGCAGACTAAATCCTGGGAGCCTCTTCCAAATATGATAAAAAAGAGAAGGTATTGCTCTGGCTGTTACATGGACAACAAGTTTTATGTGATTGGCGGGAGAGACCCTGATGGAAGAGGTCTCAGTTGCGCAGAAGCCTTTGATATGGAGAAGAAGACATGGGAACTGATCCCAGACATGTTAGAAGTAGATGATGCTCAAGACCAAGCTTTGAATAACCAATCCCCGCCTCTCGTTGCGGTTGTGAACAACGAGCTCTACTCACTCGAAACCCGCACAAACGAGCTCAAGGTGCATATGAAGAGAAGCAAATCATGGAAGAAGTTGGGAACTGTTCCGGTGAGAGCTGATACTACTCTAGGATGGGGAATAGCTTTTAAGTCGCTGGGGAATGAGTTACTTGTCATACAATCTTCACAATATGGTCCTTCTCTGCTATACACTTGCTGCCCTAATCCAAATGCTGAGGAGTTGCAGTGGGAAGCTCTTGAACATGGCAAAAACCCTACCTGCTTCATCGTCAATTGTTCTGTCATGGCAGCTTGA

Protein Analysis

420

Amino Acids

47.48

Weight (kDa)

6.0

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_Calicin PF13964 184 - 299 3.1e-09 Calicin, beta-propeller domain
Kelch_FKB95 PF25210 242 - 298 1.2e-09 FKB95, Kelch-repeats domain
Kelch_1 PF01344 255 - 299 9.1e-13 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 847
Acc36I ACCTGC 1 cut(s) 1235
AccII CGCG 2 cut(s) 461, 480
AclWI GGATC 1 cut(s) 880
AcsI RAATTY 1 cut(s) 413
AfaI GTAC 3 cut(s) 172, 278, 338
AfeI AGCGCT 1 cut(s) 305
AfiI CCNNNNNNNGG 2 cut(s) 393, 394
AflIII ACRYGT 2 cut(s) 632, 894
AgsI TTSAA 5 cut(s) 233, 322, 430, 931, 1208
AjnI CCWGG 3 cut(s) 27, 266, 731
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
Alw21I GWGCWC 3 cut(s) 135, 975, 1005
Alw26I GTCTC 3 cut(s) 526, 813, 842
AlwI GGATC 1 cut(s) 880
Ama87I CYCGRG 2 cut(s) 258, 356
Aor51HI AGCGCT 1 cut(s) 305
AoxI GGCC 1 cut(s) 255
ApeKI GCWGC 5 cut(s) 96, 99, 139, 1164, 1256
ApoI RAATTY 1 cut(s) 413
Asp700I GAANNNNTTC 1 cut(s) 287
AspLEI GCGC 2 cut(s) 306, 848
AspS9I GGNCC 3 cut(s) 256, 590, 1142
AsuC2I CCSGG 2 cut(s) 259, 260
AsuHPI GGTGA 4 cut(s) 44, 307, 494, 1069
AvaI CYCGRG 2 cut(s) 258, 356
AvaII GGWCC 2 cut(s) 590, 1142
BanII GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
BbsI GAAGAC 1 cut(s) 878
Bbv12I GWGCWC 3 cut(s) 135, 975, 1005
BbvCI CCTCAGC 1 cut(s) 1182
BbvI GCAGC 4 cut(s) 108, 111, 151, 1151
BccI CCATC 3 cut(s) 101, 821, 1074
BciT130I CCWGG 3 cut(s) 29, 268, 733
BclI TGATCA 1 cut(s) 600
BcnI CCSGG 2 cut(s) 259, 260
BcoDI GTCTC 3 cut(s) 526, 813, 842
BfaI CTAG 3 cut(s) 44, 518, 1076
BfmI CTRYAG 1 cut(s) 436
BfoI RGCGCY 1 cut(s) 307
BfuAI ACCTGC 1 cut(s) 1235
BisI GCNGC 5 cut(s) 97, 100, 140, 1165, 1257
BlsI GCNGC 5 cut(s) 98, 101, 141, 1166, 1258
BmcAI AGTACT 1 cut(s) 278
Bme1390I CCNGG 5 cut(s) 29, 259, 260, 268, 733
Bme18I GGWCC 2 cut(s) 590, 1142
BmeT110I CYCGRG 2 cut(s) 258, 356
BmgT120I GGNCC 3 cut(s) 256, 590, 1142
BmiI GGNNCC 4 cut(s) 264, 591, 640, 738
BmrFI CCNGG 5 cut(s) 29, 259, 260, 268, 733
BmrI ACTGGG 1 cut(s) 176
BmsI GCATC 2 cut(s) 187, 901
BmuI ACTGGG 1 cut(s) 176
BpiI GAAGAC 1 cut(s) 878
BplI GAGNNNNNCTC 2 cut(s) 962, 994
BpmI CTGGAG 1 cut(s) 48
Bpu10I CCTNAGC 1 cut(s) 1182
BpuEI CTTGAG 2 cut(s) 900, 989
BpuMI CCSGG 2 cut(s) 259, 260
BsaI GGTCTC 2 cut(s) 813, 842
BsaJI CCNNGG 8 cut(s) 28, 126, 258, 266, 459, 478, 608, 732
BsaWI WCCGGW 1 cut(s) 1054
BsaXI ACNNNNNCTCC 4 cut(s) 46, 76, 1178, 1208
Bsc4I CCNNNNNNNGG 2 cut(s) 393, 394
Bse118I RCCGGY 1 cut(s) 656
Bse1I ACTGG 2 cut(s) 171, 284
BseBI CCWGG 3 cut(s) 29, 268, 733
BseDI CCNNGG 8 cut(s) 28, 126, 258, 266, 459, 478, 608, 732
BseGI GGATG 4 cut(s) 202, 469, 474, 1085
BseLI CCNNNNNNNGG 2 cut(s) 393, 394
BseMII CTCAG 3 cut(s) 264, 853, 1173
BseNI ACTGG 2 cut(s) 171, 284
BseRI GAGGAG 1 cut(s) 1199
BseXI GCAGC 4 cut(s) 108, 111, 151, 1151
BseYI CCCAGC 1 cut(s) 1102
BsgI GTGCAG 1 cut(s) 522
Bsh1236I CGCG 2 cut(s) 461, 480
BshFI GGCC 1 cut(s) 257
BsiHKAI GWGCWC 3 cut(s) 135, 975, 1005
BsiHKCI CYCGRG 2 cut(s) 258, 356
BsiSI CCGG 3 cut(s) 259, 657, 1055
BslFI GGGAC 2 cut(s) 370, 520
BslI CCNNNNNNNGG 2 cut(s) 393, 394
BsmAI GTCTC 3 cut(s) 526, 813, 842
BsmFI GGGAC 2 cut(s) 370, 520
BsnI GGCC 1 cut(s) 257
Bso31I GGTCTC 2 cut(s) 813, 842
BsoBI CYCGRG 2 cut(s) 258, 356
Bsp1286I GDGCHC 5 cut(s) 135, 265, 363, 975, 1005
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 5 cut(s) 83, 249, 342, 600, 885
BspANI GGCC 1 cut(s) 257
BspCNI CTCAG 3 cut(s) 265, 852, 1174
BspFNI CGCG 2 cut(s) 461, 480
BspLI GGNNCC 4 cut(s) 264, 591, 640, 738
BspMAI CTGCAG 1 cut(s) 440
BspMI ACCTGC 1 cut(s) 1235
BspPI GGATC 1 cut(s) 880
BspTNI GGTCTC 2 cut(s) 813, 842
BsrFI RCCGGY 1 cut(s) 656
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 2 cut(s) 171, 284
BssAI RCCGGY 1 cut(s) 656
BssECI CCNNGG 8 cut(s) 28, 126, 258, 266, 459, 478, 608, 732
BssMI GATC 5 cut(s) 83, 249, 342, 600, 885
BssT1I CCWWGG 2 cut(s) 126, 608
Bst2UI CCWGG 3 cut(s) 29, 268, 733
Bst4CI ACNGT 1 cut(s) 1051
Bst6I CTCTTC 5 cut(s) 228, 317, 747, 826, 1013
BstAUI TGTACA 1 cut(s) 336
BstDEI CTNAG 3 cut(s) 273, 839, 1182
BstDSI CCRYGG 2 cut(s) 459, 478
BstF5I GGATG 4 cut(s) 202, 469, 474, 1085
BstFNI CGCG 2 cut(s) 461, 480
BstH2I RGCGCY 1 cut(s) 307
BstHHI GCGC 2 cut(s) 306, 848
BstKTI GATC 5 cut(s) 86, 252, 345, 603, 888
BstMAI GTCTC 3 cut(s) 526, 813, 842
BstMBI GATC 5 cut(s) 83, 249, 342, 600, 885
BstMWI GCNNNNNNNGC 4 cut(s) 96, 139, 367, 1009
BstNI CCWGG 3 cut(s) 29, 268, 733
BstNSI RCATGY 2 cut(s) 636, 898
BstSCI CCNGG 5 cut(s) 27, 257, 258, 266, 731
BstSFI CTRYAG 1 cut(s) 436
BstUI CGCG 2 cut(s) 461, 480
BstV1I GCAGC 4 cut(s) 108, 111, 151, 1151
BstV2I GAAGAC 1 cut(s) 878
BsuRI GGCC 1 cut(s) 257
BtgI CCRYGG 2 cut(s) 459, 478
BtsCI GGATG 4 cut(s) 202, 469, 474, 1085
BtsI GCAGTG 1 cut(s) 1199
BtsIMutI CAGTG 2 cut(s) 164, 1199
BveI ACCTGC 1 cut(s) 1235
CfoI GCGC 2 cut(s) 306, 848
Cfr10I RCCGGY 1 cut(s) 656
Cfr13I GGNCC 3 cut(s) 256, 590, 1142
Cfr42I CCGCGG 2 cut(s) 462, 481
Cfr9I CCCGGG 1 cut(s) 258
Csp6I GTAC 3 cut(s) 171, 277, 337
CviQI GTAC 3 cut(s) 171, 277, 337
DdeI CTNAG 3 cut(s) 273, 839, 1182
DpnI GATC 5 cut(s) 85, 251, 344, 602, 887
DpnII GATC 5 cut(s) 83, 249, 342, 600, 885
Eam1104I CTCTTC 5 cut(s) 228, 317, 747, 826, 1013
EarI CTCTTC 5 cut(s) 228, 317, 747, 826, 1013
Ecl136II GAGCTC 3 cut(s) 133, 973, 1003
Eco130I CCWWGG 2 cut(s) 126, 608
Eco24I GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
Eco31I GGTCTC 2 cut(s) 813, 842
Eco47I GGWCC 2 cut(s) 590, 1142
Eco47III AGCGCT 1 cut(s) 305
Eco53kI GAGCTC 3 cut(s) 133, 973, 1003
Eco88I CYCGRG 2 cut(s) 258, 356
EcoICRI GAGCTC 3 cut(s) 133, 973, 1003
EcoO109I RGGNCCY 1 cut(s) 590
EcoRI GAATTC 1 cut(s) 413
EcoRII CCWGG 3 cut(s) 27, 266, 731
EcoT14I CCWWGG 2 cut(s) 126, 608
EcoT38I GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
ErhI CCWWGG 2 cut(s) 126, 608
FalI AAGNNNNNCTT 6 cut(s) 275, 307, 293, 325, 577, 609
FaqI GGGAC 2 cut(s) 370, 520
FauI CCCGC 5 cut(s) 386, 466, 806, 951, 998
FauNDI CATATG 1 cut(s) 1014
FbaI TGATCA 1 cut(s) 600
Fnu4HI GCNGC 5 cut(s) 97, 100, 140, 1165, 1257
FokI GGATG 4 cut(s) 209, 461, 476, 1092
FriOI GRGCYC 5 cut(s) 135, 265, 363, 975, 1005
Fsp4HI GCNGC 5 cut(s) 97, 100, 140, 1165, 1257
FspBI CTAG 3 cut(s) 44, 518, 1076
FspI TGCGCA 1 cut(s) 847
GlaI GCGC 2 cut(s) 305, 847
GluI GCNGC 5 cut(s) 97, 100, 140, 1165, 1257
GsaI CCCAGC 1 cut(s) 1106
GsuI CTGGAG 1 cut(s) 48
HaeII RGCGCY 1 cut(s) 307
HaeIII GGCC 1 cut(s) 257
HapII CCGG 3 cut(s) 259, 657, 1055
HhaI GCGC 2 cut(s) 306, 848
Hin6I GCGC 2 cut(s) 304, 846
HinP1I GCGC 2 cut(s) 304, 846
HindIII AAGCTT 1 cut(s) 924
HinfI GANTC 4 cut(s) 20, 113, 491, 508
HpaII CCGG 3 cut(s) 259, 657, 1055
HphI GGTGA 4 cut(s) 44, 307, 494, 1069
Hpy166II GTNNAC 3 cut(s) 298, 353, 964
Hpy188I TCNGA 1 cut(s) 274
Hpy188III TCNNGA 4 cut(s) 65, 346, 917, 1205
Hpy8I GTNNAC 3 cut(s) 298, 353, 964
HpyAV CCTTC 4 cut(s) 187, 603, 759, 1155
HpyCH4III ACNGT 1 cut(s) 1051
HpyCH4V TGCA 6 cut(s) 139, 200, 438, 503, 1012, 1192
HpyF10VI GCNNNNNNNGC 4 cut(s) 96, 139, 367, 1009
HpyF3I CTNAG 3 cut(s) 273, 839, 1182
HspAI GCGC 2 cut(s) 304, 846
Ksp22I TGATCA 1 cut(s) 600
KspI CCGCGG 2 cut(s) 462, 481
Kzo9I GATC 5 cut(s) 83, 249, 342, 600, 885
LmnI GCTCC 4 cut(s) 130, 268, 450, 736
Lsp1109I GCAGC 4 cut(s) 108, 111, 151, 1151
LweI GCATC 2 cut(s) 187, 901
MaeI CTAG 3 cut(s) 44, 518, 1076
MaeIII GTNAC 3 cut(s) 209, 782, 1113
MalI GATC 5 cut(s) 85, 251, 344, 602, 887
MboI GATC 5 cut(s) 83, 249, 342, 600, 885
MfeI CAATTG 1 cut(s) 1240
MhlI GDGCHC 5 cut(s) 135, 265, 363, 975, 1005
MluCI AATT 3 cut(s) 413, 534, 1240
MlyI GAGTC 1 cut(s) 502
MroXI GAANNNNTTC 1 cut(s) 287
MseI TTAA 2 cut(s) 155, 1095
MspA1I CMGCKG 2 cut(s) 461, 480
MspI CCGG 3 cut(s) 259, 657, 1055
MspR9I CCNGG 5 cut(s) 29, 259, 260, 268, 733
MunI CAATTG 1 cut(s) 1240
MvaI CCWGG 3 cut(s) 29, 268, 733
MvnI CGCG 2 cut(s) 461, 480
MwoI GCNNNNNNNGC 4 cut(s) 96, 139, 367, 1009
NciI CCSGG 2 cut(s) 259, 260
NdeI CATATG 1 cut(s) 1014
NdeII GATC 5 cut(s) 83, 249, 342, 600, 885
NlaIV GGNNCC 4 cut(s) 264, 591, 640, 738
NmeAIII GCCGAG 1 cut(s) 730
NsbI TGCGCA 1 cut(s) 847
NspI RCATGY 2 cut(s) 636, 898
PciI ACATGT 2 cut(s) 632, 894
PdmI GAANNNNTTC 1 cut(s) 287
PfeI GAWTC 3 cut(s) 20, 113, 491
PkrI GCNGC 5 cut(s) 98, 101, 141, 1166, 1258
PleI GAGTC 1 cut(s) 502
PpsI GAGTC 1 cut(s) 502
PpuMI RGGWCCY 1 cut(s) 590
PscI ACATGT 2 cut(s) 632, 894
Psp124BI GAGCTC 3 cut(s) 135, 975, 1005
Psp5II RGGWCCY 1 cut(s) 590
Psp6I CCWGG 3 cut(s) 27, 266, 731
PspFI CCCAGC 1 cut(s) 1102
PspGI CCWGG 3 cut(s) 27, 266, 731
PspN4I GGNNCC 4 cut(s) 264, 591, 640, 738
PspPI GGNCC 3 cut(s) 256, 590, 1142
PspPPI RGGWCCY 1 cut(s) 590
PsrI GAACNNNNNNTAC 2 cut(s) 269, 301
PstI CTGCAG 1 cut(s) 440
RsaI GTAC 3 cut(s) 172, 278, 338
RsaNI GTAC 3 cut(s) 171, 277, 337
SacI GAGCTC 3 cut(s) 135, 975, 1005
SacII CCGCGG 2 cut(s) 462, 481
SaqAI TTAA 2 cut(s) 155, 1095
SatI GCNGC 5 cut(s) 97, 100, 140, 1165, 1257
Sau3AI GATC 5 cut(s) 83, 249, 342, 600, 885
Sau96I GGNCC 3 cut(s) 256, 590, 1142
SbfI CCTGCAGG 1 cut(s) 440
ScaI AGTACT 1 cut(s) 278
SchI GAGTC 1 cut(s) 502
ScrFI CCNGG 5 cut(s) 29, 259, 260, 268, 733
SdaI CCTGCAGG 1 cut(s) 440
SduI GDGCHC 5 cut(s) 135, 265, 363, 975, 1005
SfaNI GCATC 2 cut(s) 187, 901
SfcI CTRYAG 1 cut(s) 436
Sfr303I CCGCGG 2 cut(s) 462, 481
SgrBI CCGCGG 2 cut(s) 462, 481
SinI GGWCC 2 cut(s) 590, 1142
SmaI CCCGGG 1 cut(s) 260
SmlI CTYRAG 2 cut(s) 915, 1004
SmoI CTYRAG 2 cut(s) 915, 1004
SrfI GCCCGGGC 1 cut(s) 260
Sse8387I CCTGCAGG 1 cut(s) 440
Sse9I AATT 3 cut(s) 413, 534, 1240
SspMI CTAG 3 cut(s) 44, 518, 1076
SstI GAGCTC 3 cut(s) 135, 975, 1005
StyD4I CCNGG 5 cut(s) 27, 257, 258, 266, 731
StyI CCWWGG 2 cut(s) 126, 608
TaaI ACNGT 1 cut(s) 1051
TaqI TCGA 2 cut(s) 417, 984
TasI AATT 3 cut(s) 413, 534, 1240
TatI WGTACW 2 cut(s) 276, 336
TfiI GAWTC 3 cut(s) 20, 113, 491
Tru1I TTAA 2 cut(s) 155, 1095
Tru9I TTAA 2 cut(s) 155, 1095
TscAI CASTG 2 cut(s) 171, 1199
TseI GCWGC 5 cut(s) 96, 99, 139, 1164, 1256
TspDTI ATGAA 5 cut(s) 105, 463, 480, 1031, 1222
TspMI CCCGGG 1 cut(s) 258
TspRI CASTG 2 cut(s) 171, 1199
VpaK11BI GGWCC 2 cut(s) 590, 1142
XapI RAATTY 1 cut(s) 413
XceI RCATGY 2 cut(s) 636, 898
XmaI CCCGGG 1 cut(s) 258
XmnI GAANNNNTTC 1 cut(s) 287
XspI CTAG 3 cut(s) 44, 518, 1076
ZrmI AGTACT 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.