Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0010255

Physical Location & Seq

Genomic Coordinates Forward (+)

83146577 .. 83150512

Gene Structure 3936 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022406

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGCGAGCAGGTACTGGGTGGTGTCTCTGCCTGTCCAAAACTCGGCGTCGTCTCTATGGAACCGCCTCCAGGATCAAATCTCTAAGCATTCCTTCGACACTCCCCTCTACAGATTCAATATTCCCAATCTCCGCGTCGGAACCCTCGATTCTCTTCTCTCCCTCAGCGACGATCTCTTAAAGTCCAACAACTTCGTAGAGGGTGTTTCTCACAAGATCAGGCGCCAGATCGAGGAGCTAGAGAAGGTTTCTGGAGTCGAGAGCAGCTCTCTCACCGTGGATGGAGTGCCAGTGGATTCATACCTCACTAGGTTCGTTTGGGATGAAGCTAAGTTCCCGACAATGTCTCCTTTGAAGGAGGTCATCGACAGCATTCATGGTCAAGTTGCAAAGATCGAGGATGATCTCAAGGTTCGGGTAGCTGAGTATAACAATGTTCGCAGTCAACTTAATGCTATCAACCGAAAGCAGAGTGGAAGCTTAGCAGTCCGTGATCTTTCCAATTTAGTGAAATCAGAGGACATCGTTGTCTCGGAACATCTGGTGACCCTCCTTGCAGTTGTTCCCAAGTACTCTCAGAAGGATTGGCTGTCAAGCTATGAGACCTTGACTAGTTATGTGGTCCCTAGGTCCTCTAAGAAGTTATTTGAAGATAATGAATATGCTCTTTACAGTGTAACACTGTTTGGTCGAGTTGCAGATAATTTTAGAACAAGCGCTCGTGAAAAGGGATTCCAAATTCGTGATTTTGAATATAGTTCTGAAGCACAAGAAAGTCGCAAGCAGGAGTTGGAAAAATTGGTACAAGACCAAGAAAATTTAAGAAGCTCGCTTTTGCAGTGGTGCTATACCAGTTATGGGGAGGTGTTCAGCTCCTGGATGCATTTTTGTGCTGTACGTGTGTTTGCTGAGAGTATTCTGAGATATGGCTTACCACCATCTTTCTTGGCATGTGTTTTAGCTCCAGTTACAAAAAGTGAGAAGAAAGTACGATCAATCCTTGAGGGGCTGTGCGACAGTTCTAACAGTGCTTTCTGGAAAACTGAAGATGAAGTGGGGGGAGGGATGGCTGGTCTAGCAGGTGATGCGGATGCACATCCGCTGCATTACAGAATTAGTTTGATCAGGAATGTCAAAGCTTTGGGAAAAAAGATAACATTCTGGTTGGCGGCACGAGCGGCTAGCGGCTACTCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000221 GO:0000325 GO:0000902 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008553 GO:0009507 GO:0009536 GO:0009653 GO:0009826 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016469 GO:0016471 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031090 GO:0032502 GO:0032989 GO:0032991 GO:0033176 GO:0033178 GO:0033180 GO:0034220 GO:0036442 GO:0040007 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0060560 GO:0071840 GO:0071944 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098796 GO:0098805 GO:0099131 GO:0099132 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323

Pfam Domains

Protein Families

V-ATPase_C

Protein Analysis

400

Amino Acids

45.0

Weight (kDa)

6.68

Isoelectric Point (pI)

50.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
V-ATPase_C	PF03223	5 - 347	1.8e-128	V-ATPase subunit C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12840
fragaria_vesca	FvH4_6g54180 FvH4_6g54180 FvH4_6g54180
malus_domestica	MD09G1004500.v1.1 MD17G1008500.v1.1
prunus_persica	Prupe.3G312200_v2.0.a1 Prupe.3G312200_v2.0.a1
pyrus_communis	pycom111g00330 pycom17g00350
rosa_chinensis	RchiOBHm_Chr2g0176361
rosa_laevigata	RLG00000022406
rosa_multiflora	Rmu_sc0009140.1_g000001 Rmu_sc0027060.1_g000004 Rmu_sc0035399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076540
rosa_rugosa	Rorug02G0593500
rosa_samantha	Rh2AG672000 Rh2BG683500 Rh2DG697000
rosa_wichuraiana	Rw2G055110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1070
AasI	GACNNNNNNGTC	1 cut(s)	527
Acc36I	ACCTGC	1 cut(s)	1070
AccB1I	GGYRCC	1 cut(s)	222
AccBSI	CCGCTC	1 cut(s)	1178
AccII	CGCG	1 cut(s)	135
AciI	CCGC	7 cut(s)	64, 133, 1088, 1100, 1169, 1178, 1185
AclWI	GGATC	1 cut(s)	81
AcsI	RAATTY	2 cut(s)	738, 817
AcuI	CTGAAG	2 cut(s)	783, 1065
AcyI	GRCGYC	2 cut(s)	47, 223
AfaI	GTAC	5 cut(s)	14, 572, 804, 897, 990
AfeI	AGCGCT	1 cut(s)	718
AfiI	CCNNNNNNNGG	4 cut(s)	43, 70, 232, 858
AflIII	ACRYGT	1 cut(s)	898
AgsI	TTSAA	4 cut(s)	118, 355, 650, 752
AhlI	ACTAGT	1 cut(s)	611
AjnI	CCWGG	2 cut(s)	69, 875
Alw26I	GTCTC	5 cut(s)	30, 57, 351, 535, 596
AlwI	GGATC	1 cut(s)	81
AlwNI	CAGNNNCTG	2 cut(s)	15, 876
Aor51HI	AGCGCT	1 cut(s)	718
ApeKI	GCWGC	2 cut(s)	264, 1102
ApoI	RAATTY	2 cut(s)	738, 817
AspA2I	CCTAGG	1 cut(s)	626
AspLEI	GCGC	2 cut(s)	225, 719
AspS9I	GGNCC	2 cut(s)	622, 630
AsuHPI	GGTGA	3 cut(s)	265, 556, 1094
AsuNHI	GCTAGC	1 cut(s)	1181
AvaII	GGWCC	2 cut(s)	622, 630
AvrII	CCTAGG	1 cut(s)	626
BanI	GGYRCC	1 cut(s)	222
BauI	CACGAG	2 cut(s)	720, 1173
BbvCI	CCTCAGC	1 cut(s)	164
BbvI	GCAGC	2 cut(s)	276, 1089
BccI	CCATC	3 cut(s)	275, 946, 1060
BciT130I	CCWGG	2 cut(s)	71, 877
BclI	TGATCA	1 cut(s)	1122
BcoDI	GTCTC	5 cut(s)	30, 57, 351, 535, 596
BcuI	ACTAGT	1 cut(s)	611
BfaI	CTAG	6 cut(s)	239, 309, 612, 627, 1076, 1182
BfmI	CTRYAG	1 cut(s)	109
BfoI	RGCGCY	2 cut(s)	226, 720
BfuAI	ACCTGC	1 cut(s)	1070
BisI	GCNGC	5 cut(s)	265, 1103, 1170, 1179, 1186
BlnI	CCTAGG	1 cut(s)	626
BlpI	GCTNAGC	1 cut(s)	481
BlsI	GCNGC	5 cut(s)	266, 1104, 1171, 1180, 1187
BmcAI	AGTACT	1 cut(s)	572
Bme1390I	CCNGG	2 cut(s)	71, 877
Bme18I	GGWCC	2 cut(s)	622, 630
BmgT120I	GGNCC	2 cut(s)	622, 630
BmiI	GGNNCC	4 cut(s)	62, 142, 224, 624
BmrFI	CCNGG	2 cut(s)	71, 877
BmrI	ACTGGG	1 cut(s)	25
BmsI	GCATC	3 cut(s)	870, 1075, 1081
BmtI	GCTAGC	1 cut(s)	1185
BmuI	ACTGGG	1 cut(s)	25
BplI	GAGNNNNNCTC	4 cut(s)	251, 283, 253, 285
BpmI	CTGGAG	3 cut(s)	53, 273, 948
Bpu10I	CCTNAGC	1 cut(s)	164
Bpu1102I	GCTNAGC	1 cut(s)	481
BpuEI	CTTGAG	2 cut(s)	392, 1022
BsaAI	YACGTR	1 cut(s)	899
BsaBI	GATNNNNATC	1 cut(s)	1095
BsaHI	GRCGYC	2 cut(s)	47, 223
BsaI	GGTCTC	1 cut(s)	596
BsaJI	CCNNGG	2 cut(s)	276, 626
BsaXI	ACNNNNNCTCC	4 cut(s)	276, 306, 331, 361
Bsc4I	CCNNNNNNNGG	4 cut(s)	43, 70, 232, 858
Bse1I	ACTGG	4 cut(s)	20, 290, 852, 965
Bse8I	GATNNNNATC	1 cut(s)	1095
BseBI	CCWGG	2 cut(s)	71, 877
BseDI	CCNNGG	2 cut(s)	276, 626
BseGI	GGATG	7 cut(s)	286, 328, 406, 885, 1071, 1096, 1096
BseJI	GATNNNNATC	1 cut(s)	1095
BseLI	CCNNNNNNNGG	4 cut(s)	43, 70, 232, 858
BseMII	CTCAG	5 cut(s)	178, 414, 590, 900, 911
BseNI	ACTGG	4 cut(s)	20, 290, 852, 965
BseRI	GAGGAG	1 cut(s)	248
BseXI	GCAGC	2 cut(s)	276, 1089
Bsh1236I	CGCG	1 cut(s)	135
BshNI	GGYRCC	1 cut(s)	222
BslFI	GGGAC	1 cut(s)	608
BslI	CCNNNNNNNGG	4 cut(s)	43, 70, 232, 858
BsmAI	GTCTC	5 cut(s)	30, 57, 351, 535, 596
BsmBI	CGTCTC	1 cut(s)	57
BsmFI	GGGAC	1 cut(s)	608
BsmI	GAATGC	2 cut(s)	88, 372
Bso31I	GGTCTC	1 cut(s)	596
Bsp143I	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
Bsp1720I	GCTNAGC	1 cut(s)	481
BspACI	CCGC	7 cut(s)	64, 133, 1088, 1100, 1169, 1178, 1185
BspCNI	CTCAG	5 cut(s)	177, 415, 589, 901, 912
BspFNI	CGCG	1 cut(s)	135
BspLI	GGNNCC	4 cut(s)	62, 142, 224, 624
BspMI	ACCTGC	1 cut(s)	1070
BspOI	GCTAGC	1 cut(s)	1185
BspPI	GGATC	1 cut(s)	81
BspT107I	GGYRCC	1 cut(s)	222
BspTNI	GGTCTC	1 cut(s)	596
BsrBI	CCGCTC	1 cut(s)	1178
BsrI	ACTGG	4 cut(s)	20, 290, 852, 965
BssECI	CCNNGG	2 cut(s)	276, 626
BssMI	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
BssNI	GRCGYC	2 cut(s)	47, 223
BssSI	CACGAG	2 cut(s)	720, 1173
BssT1I	CCWWGG	1 cut(s)	626
Bst2BI	CACGAG	2 cut(s)	720, 1173
Bst2UI	CCWGG	2 cut(s)	71, 877
Bst4CI	ACNGT	5 cut(s)	277, 674, 684, 1019, 1028
Bst6I	CTCTTC	1 cut(s)	159
BstACI	GRCGYC	2 cut(s)	47, 223
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstBAI	YACGTR	1 cut(s)	899
BstC8I	GCNNGC	4 cut(s)	7, 782, 830, 1183
BstDEI	CTNAG	9 cut(s)	84, 164, 330, 423, 481, 576, 636, 909, 920
BstDSI	CCRYGG	1 cut(s)	276
BstEII	GGTNACC	1 cut(s)	544
BstF5I	GGATG	7 cut(s)	286, 328, 406, 885, 1071, 1096, 1096
BstFNI	CGCG	1 cut(s)	135
BstH2I	RGCGCY	2 cut(s)	226, 720
BstHHI	GCGC	2 cut(s)	225, 719
BstKTI	GATC	9 cut(s)	76, 175, 219, 231, 396, 406, 496, 995, 1125
BstMAI	GTCTC	5 cut(s)	30, 57, 351, 535, 596
BstMBI	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
BstMWI	GCNNNNNNNGC	4 cut(s)	1076, 1085, 1175, 1178
BstNI	CCWGG	2 cut(s)	71, 877
BstNSI	RCATGY	1 cut(s)	954
BstPI	GGTNACC	1 cut(s)	544
BstSCI	CCNGG	2 cut(s)	69, 875
BstSFI	CTRYAG	1 cut(s)	109
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	2 cut(s)	276, 1089
BtgI	CCRYGG	1 cut(s)	276
BtsCI	GGATG	7 cut(s)	286, 328, 406, 885, 1071, 1096, 1096
BtsI	GCAGTG	1 cut(s)	845
BtsIMutI	CAGTG	5 cut(s)	297, 679, 680, 845, 1033
BveI	ACCTGC	1 cut(s)	1070
Cac8I	GCNNGC	4 cut(s)	7, 782, 830, 1183
CaiI	CAGNNNCTG	2 cut(s)	15, 876
CfoI	GCGC	2 cut(s)	225, 719
Cfr13I	GGNCC	2 cut(s)	622, 630
CseI	GACGC	2 cut(s)	36, 124
Csp6I	GTAC	5 cut(s)	13, 571, 803, 896, 989
CviAII	CATG	2 cut(s)	377, 951
CviQI	GTAC	5 cut(s)	13, 571, 803, 896, 989
DdeI	CTNAG	9 cut(s)	84, 164, 330, 423, 481, 576, 636, 909, 920
DinI	GGCGCC	1 cut(s)	224
DpnI	GATC	9 cut(s)	75, 174, 218, 230, 395, 405, 495, 994, 1124
DpnII	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
DrdI	GACNNNNNNGTC	1 cut(s)	527
DseDI	GACNNNNNNGTC	1 cut(s)	527
Eam1104I	CTCTTC	1 cut(s)	159
EarI	CTCTTC	1 cut(s)	159
Eco130I	CCWWGG	1 cut(s)	626
Eco31I	GGTCTC	1 cut(s)	596
Eco47I	GGWCC	2 cut(s)	622, 630
Eco47III	AGCGCT	1 cut(s)	718
Eco57I	CTGAAG	2 cut(s)	783, 1065
Eco91I	GGTNACC	1 cut(s)	544
EcoO109I	RGGNCCY	1 cut(s)	630
EcoO65I	GGTNACC	1 cut(s)	544
EcoRII	CCWGG	2 cut(s)	69, 875
EcoT14I	CCWWGG	1 cut(s)	626
EcoT22I	ATGCAT	1 cut(s)	885
EgeI	GGCGCC	1 cut(s)	224
EheI	GGCGCC	1 cut(s)	224
ErhI	CCWWGG	1 cut(s)	626
Esp3I	CGTCTC	1 cut(s)	57
FaeI	CATG	2 cut(s)	380, 954
FalI	AAGNNNNNCTT	2 cut(s)	77, 109
FaqI	GGGAC	1 cut(s)	608
FatI	CATG	2 cut(s)	376, 950
FbaI	TGATCA	1 cut(s)	1122
Fnu4HI	GCNGC	5 cut(s)	265, 1103, 1170, 1179, 1186
FokI	GGATG	7 cut(s)	293, 335, 413, 892, 1078, 1083, 1103
Fsp4HI	GCNGC	5 cut(s)	265, 1103, 1170, 1179, 1186
FspBI	CTAG	6 cut(s)	239, 309, 612, 627, 1076, 1182
GlaI	GCGC	2 cut(s)	224, 718
GluI	GCNGC	5 cut(s)	265, 1103, 1170, 1179, 1186
GsuI	CTGGAG	3 cut(s)	53, 273, 948
HaeII	RGCGCY	2 cut(s)	226, 720
HgaI	GACGC	2 cut(s)	36, 124
HhaI	GCGC	2 cut(s)	225, 719
Hin1I	GRCGYC	2 cut(s)	47, 223
Hin1II	CATG	2 cut(s)	380, 954
Hin6I	GCGC	2 cut(s)	223, 717
HinP1I	GCGC	2 cut(s)	223, 717
HincII	GTYRAC	1 cut(s)	446
HindII	GTYRAC	1 cut(s)	446
HindIII	AAGCTT	2 cut(s)	478, 1137
HinfI	GANTC	5 cut(s)	114, 149, 255, 296, 732
HphI	GGTGA	3 cut(s)	265, 556, 1094
Hpy166II	GTNNAC	1 cut(s)	446
Hpy188I	TCNGA	6 cut(s)	140, 517, 535, 579, 763, 921
Hpy188III	TCNNGA	8 cut(s)	252, 259, 337, 722, 743, 1036, 1126, 1197
Hpy8I	GTNNAC	1 cut(s)	446
Hpy99I	CGWCG	3 cut(s)	52, 140, 173
HpyAV	CCTTC	4 cut(s)	103, 238, 349, 574
HpyCH4III	ACNGT	5 cut(s)	277, 674, 684, 1019, 1028
HpyCH4IV	ACGT	1 cut(s)	898
HpyCH4V	TGCA	7 cut(s)	389, 557, 698, 838, 883, 1094, 1105
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1076, 1085, 1175, 1178
HpyF3I	CTNAG	9 cut(s)	84, 164, 330, 423, 481, 576, 636, 909, 920
HpySE526I	ACGT	1 cut(s)	898
Hsp92I	GRCGYC	2 cut(s)	47, 223
Hsp92II	CATG	2 cut(s)	380, 954
HspAI	GCGC	2 cut(s)	223, 717
KasI	GGCGCC	1 cut(s)	222
Ksp22I	TGATCA	1 cut(s)	1122
Kzo9I	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
LmnI	GCTCC	3 cut(s)	235, 878, 967
Lsp1109I	GCAGC	2 cut(s)	276, 1089
LweI	GCATC	3 cut(s)	870, 1075, 1081
MaeI	CTAG	6 cut(s)	239, 309, 612, 627, 1076, 1182
MaeII	ACGT	1 cut(s)	898
MaeIII	GTNAC	3 cut(s)	544, 676, 967
MalI	GATC	9 cut(s)	75, 174, 218, 230, 395, 405, 495, 994, 1124
MbiI	CCGCTC	1 cut(s)	1178
MboI	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
MboII	GAAGA	5 cut(s)	146, 662, 994, 1058, 1185
MluCI	AATT	6 cut(s)	502, 703, 738, 797, 817, 1113
Mly113I	GGCGCC	1 cut(s)	223
MlyI	GAGTC	1 cut(s)	264
MmeI	TCCRAC	3 cut(s)	118, 210, 771
Mph1103I	ATGCAT	1 cut(s)	885
MseI	TTAA	3 cut(s)	179, 450, 821
MslI	CAYNNNNRTG	1 cut(s)	888
MspA1I	CMGCKG	1 cut(s)	1102
MspR9I	CCNGG	2 cut(s)	71, 877
Mva1269I	GAATGC	2 cut(s)	88, 372
MvaI	CCWGG	2 cut(s)	71, 877
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	4 cut(s)	1076, 1085, 1175, 1178
NarI	GGCGCC	1 cut(s)	223
NdeII	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
NheI	GCTAGC	1 cut(s)	1181
NlaIII	CATG	2 cut(s)	380, 954
NlaIV	GGNNCC	4 cut(s)	62, 142, 224, 624
NmeAIII	GCCGAG	1 cut(s)	23
NmuCI	GTSAC	1 cut(s)	544
NsiI	ATGCAT	1 cut(s)	885
NspI	RCATGY	1 cut(s)	954
PaqCI	CACCTGC	1 cut(s)	1070
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	2 cut(s)	88, 372
PfeI	GAWTC	4 cut(s)	114, 149, 296, 732
PflFI	GACNNNGTC	1 cut(s)	343
PfoI	TCCNGGA	2 cut(s)	69, 875
PkrI	GCNGC	5 cut(s)	266, 1104, 1171, 1180, 1187
PleI	GAGTC	1 cut(s)	263
PluTI	GGCGCC	1 cut(s)	226
PpsI	GAGTC	1 cut(s)	263
Ppu21I	YACGTR	1 cut(s)	899
PpuMI	RGGWCCY	1 cut(s)	630
Psp5II	RGGWCCY	1 cut(s)	630
Psp6I	CCWGG	2 cut(s)	69, 875
PspEI	GGTNACC	1 cut(s)	544
PspGI	CCWGG	2 cut(s)	69, 875
PspN4I	GGNNCC	4 cut(s)	62, 142, 224, 624
PspPI	GGNCC	2 cut(s)	622, 630
PspPPI	RGGWCCY	1 cut(s)	630
PstNI	CAGNNNCTG	2 cut(s)	15, 876
PsyI	GACNNNGTC	1 cut(s)	343
RsaI	GTAC	5 cut(s)	14, 572, 804, 897, 990
RsaNI	GTAC	5 cut(s)	13, 571, 803, 896, 989
RseI	CAYNNNNRTG	1 cut(s)	888
SaqAI	TTAA	3 cut(s)	179, 450, 821
SatI	GCNGC	5 cut(s)	265, 1103, 1170, 1179, 1186
Sau3AI	GATC	9 cut(s)	73, 172, 216, 228, 393, 403, 493, 992, 1122
Sau96I	GGNCC	2 cut(s)	622, 630
ScaI	AGTACT	1 cut(s)	572
SchI	GAGTC	1 cut(s)	264
ScrFI	CCNGG	2 cut(s)	71, 877
SfaNI	GCATC	3 cut(s)	870, 1075, 1081
SfcI	CTRYAG	1 cut(s)	109
SfoI	GGCGCC	1 cut(s)	224
SinI	GGWCC	2 cut(s)	622, 630
SmiMI	CAYNNNNRTG	1 cut(s)	888
SmlI	CTYRAG	2 cut(s)	407, 1001
SmoI	CTYRAG	2 cut(s)	407, 1001
SpeI	ACTAGT	1 cut(s)	611
Sse9I	AATT	6 cut(s)	502, 703, 738, 797, 817, 1113
SsiI	CCGC	7 cut(s)	64, 133, 1088, 1100, 1169, 1178, 1185
SspDI	GGCGCC	1 cut(s)	222
SspI	AATATT	1 cut(s)	121
SspMI	CTAG	6 cut(s)	239, 309, 612, 627, 1076, 1182
StyD4I	CCNGG	2 cut(s)	69, 875
StyI	CCWWGG	1 cut(s)	626
TaaI	ACNGT	5 cut(s)	277, 674, 684, 1019, 1028
TaiI	ACGT	1 cut(s)	901
TaqI	TCGA	7 cut(s)	96, 147, 231, 258, 366, 396, 691
TasI	AATT	6 cut(s)	502, 703, 738, 797, 817, 1113
TatI	WGTACW	1 cut(s)	570
TauI	GCSGC	3 cut(s)	1172, 1181, 1188
TfiI	GAWTC	4 cut(s)	114, 149, 296, 732
Tru1I	TTAA	3 cut(s)	179, 450, 821
Tru9I	TTAA	3 cut(s)	179, 450, 821
TscAI	CASTG	5 cut(s)	297, 679, 687, 845, 1033
TseFI	GTSAC	1 cut(s)	544
TseI	GCWGC	2 cut(s)	264, 1102
Tsp45I	GTSAC	1 cut(s)	544
TspDTI	ATGAA	5 cut(s)	288, 339, 365, 672, 1065
TspGWI	ACGGA	1 cut(s)	479
TspRI	CASTG	5 cut(s)	297, 679, 687, 845, 1033
Tth111I	GACNNNGTC	1 cut(s)	343
VpaK11BI	GGWCC	2 cut(s)	622, 630
XapI	RAATTY	2 cut(s)	738, 817
XceI	RCATGY	1 cut(s)	954
XmaJI	CCTAGG	1 cut(s)	626
XspI	CTAG	6 cut(s)	239, 309, 612, 627, 1076, 1182
ZrmI	AGTACT	1 cut(s)	572
Zsp2I	ATGCAT	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.